Trimin1|169277|e_gw1.62.153.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|169277
Unique NameTrimin1|169277|e_gw1.62.153.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length320
Homology
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BLAST of jgi.p|Trimin1|169277 vs. uniprot
Match: A0A835YW66_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW66_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 2.370e-12
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0 
Query:    1 MLQFPQALHSLYITGCPALTALPESICKLAMLKVLVVK 38
            MLQFPQALHSLYITGCPALTALPESICKLAMLKVLVVK
Sbjct:    1 MLQFPQALHSLYITGCPALTALPESICKLAMLKVLVVK 38
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169277 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YW66_9STRA2.370e-12100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 111..315
e-value: 2.6E-43
score: 149.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..103
e-value: 4.5E-23
score: 83.2
NoneNo IPR availablePANTHERPTHR16083:SF25SUBFAMILY NOT NAMEDcoord: 117..232
coord: 213..306
coord: 8..136
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 117..232
coord: 213..306
coord: 8..136
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 6..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_62contigContig_62:727877..728836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169277mRNA_6580Tribonema minus UTEX_B_3156 mRNAContig_62 727877..728836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|169277|e_gw1.62.153.1 ID=Trimin1|169277|e_gw1.62.153.1|Name=jgi.p|Trimin1|169277|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=320bp
MLQFPQALHSLYITGCPALTALPESICKLAMLKVLVVKTCSSLTALPTSI
SKLAALERLTIDECESLTALPNSIGQLAALERLHVRDCEGLNALPDSIGQ
LAALKSLRVDGSEGLTALPDSIGQLPALLTLILSMCDGLTALPNSIGQLA
ELQTLCVLDCEGLTELPHSIGQLDALETLHVFGCEGLTTLPDSTGQLLAL
ETLIVSGCRGLTALPNSIGELAELRKLEVKDCEGLTALPDSIGQLAALET
LIVSGCRCLTELPNSIGELAALRKLEVKDCEGLTALPESICQLLALQHID
ITGTRCTRVNVRGCLIICR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf