Trimin1|352182|estExt_Genemark1.C_Ctg_1110032 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352182
Unique NameTrimin1|352182|estExt_Genemark1.C_Ctg_1110032
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length529
Homology
BLAST of jgi.p|Trimin1|352182 vs. uniprot
Match: A0A835ZES8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZES8_9STRA)

HSP 1 Score: 627 bits (1618), Expect = 3.470e-220
Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 0
Query:    1 MGVGANLQPERQKHLLSSSFDAALQELIEFQQQPKEDISTDMVLSRLHVQEVNVLYWQAVTQAREKGRKLLDAPEAVAGAVAAGXXXXXRAQVAEETDALDTVLRTLVAAAARTQGRAAKLAAANTALAGRADDVIAQLQRAQATAQAAIARTATANGNVTAGTTXXXXXXXXXXXXXVPPAARRASAPAPSQTSRTAPPQIHAGNGGDTNAAAASPHAAGEWRRASTGTLPRTPPPQPXXXXXXXXXXXXXXXXHAAAAIAEQALRPPSRITASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAXXXXXXXXXXVSPLSKPVMITPVKLXXXXXXXXXXXXXXXXXXXXXXSKSPPRRGVSLKKLGEQLSARLLCDGSSKGKDGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRDRELLDLYEQLQQXXXXRQWQESRAPPLXXXXXXXXXXXXXXXLSPLSTARAAAADAAWRTHRDQQRXXXXXAKGVPVSPIGSSKALAAAAVRVTAEGRYSPRA 528
            MGVGANLQPERQKHLLSSSFDAALQELIEFQQQPKEDISTDMVLSRLHVQEVNVLYWQAVTQAREKGRKLLDAPEAVAGAVAAGXXXXXRAQVAEETDALDTVLRTLVAAAARTQGRAAKLAAANTALAGRADDVIAQLQRAQATAQAAIARTATANGNVTAGTTXXXXXXXXXXXXXVPPAARRASAPAPSQTSRTAPPQIHAGNGGDTNAAAASPHAAGEWRRASTGTLPRTPPPQPXXXXXXXXXXXXXXXXHAAAAIAEQALRPPSRITASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAXXXXXXXXXXVSPLSKPVMITPVKLXXXXXXXXXXXXXXXXXXXXXXSKSPPRRGVSLKKLGEQLSARLLCDGSSKGKDGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRDRELLDLYEQLQQXXXXRQWQESRAPPLXXXXXXXXXXXXXXXLSPLSTARAAAADAAWRTHRDQQRXXXXXAKGVPVSPIGSSKALAAAAVRVTAEGRYSPRA
Sbjct:    1 MGVGANLQPERQKHLLSSSFDAALQELIEFQQQPKEDISTDMVLSRLHVQEVNVLYWQAVTQAREKGRKLLDAPEAVAGAVAAGXXXXXRAQVAEETDALDTVLRTLVAAAARTQGRAAKLAAANTALAGRADDVIAQLQRAQATAQAAIARTATANGNVTAGTTXXXXXXXXXXXXXVPPAARRASAPAPSQTSRTAPPQIHAGNGGDTNAAAASPHAAGEWRRASTGTLPRTPPPQPXXXXXXXXXXXXXXXXHAAAAIAEQALRPPSRITASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAXXXXXXXXXXVSPLSKPVMITPVKLXXXXXXXXXXXXXXXXXXXXXXSKSPPRRGVSLKKLGEQLSARLLCDGSSKGKDGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRDRELLDLYEQLQQXXXXRQWQESRAPPLXXXXXXXXXXXXXXXLSPLSTARAAAADAAWRTHRDQQRXXXXXAKGVPVSPIGSSKALAAAAVRVTAEGRYSPRA 528          
BLAST of jgi.p|Trimin1|352182 vs. uniprot
Match: A0A836CJH7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH7_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 7.950e-13
Identity = 42/61 (68.85%), Postives = 49/61 (80.33%), Query Frame = 0
Query:   18 SSFDAALQELIEFQQQPKEDISTDMVLSRLHVQEVNVLYWQAVTQAREKGRKLLDAPEAVA 78
            +SFDAALQEL+EFQQQPKED  + +V +R HVQ+V +LYWQA  QAREKGRKL D  E VA
Sbjct:   94 TSFDAALQELVEFQQQPKEDTGSYIVRARRHVQDVKMLYWQAAAQAREKGRKLPDLSECVA 154          
BLAST of jgi.p|Trimin1|352182 vs. uniprot
Match: A0A835YLH3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLH3_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 4.940e-10
Identity = 40/61 (65.57%), Postives = 46/61 (75.41%), Query Frame = 0
Query:   18 SSFDAALQELIEFQQQPKEDISTDMVLSRLHVQEVNVLYWQAVTQAREKGRKLLDAPEAVA 78
            +SFDAALQELI+FQQQP  +I   MV  R HVQ V +LYWQAV QAR+KGRKL D  + VA
Sbjct:   82 TSFDAALQELIKFQQQPNINIGNYMVRPRRHVQAVKMLYWQAVAQARDKGRKLPDLIKCVA 142          
BLAST of jgi.p|Trimin1|352182 vs. uniprot
Match: A0A835Z8X0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X0_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.140e-9
Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = 0
Query:   23 ALQELIEFQQQPKEDISTDMVLSRLHVQEVNVLYWQAVTQAREKGRKLLDAPEAVA 78
            A+ EL+EFQQQ KED  + +V +R HVQ+V +LYWQA  QAREKGRKL D  E VA
Sbjct:   29 AMPELVEFQQQTKEDTGSYIVRARRHVQDVKMLYWQAAAQAREKGRKLPDLFECVA 84          
BLAST of jgi.p|Trimin1|352182 vs. uniprot
Match: A0A835YMC2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMC2_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 7.290e-9
Identity = 38/61 (62.30%), Postives = 44/61 (72.13%), Query Frame = 0
Query:   18 SSFDAALQELIEFQQQPKEDISTDMVLSRLHVQEVNVLYWQAVTQAREKGRKLLDAPEAVA 78
            +SFDAALQEL+EFQQQPK +IS  MV +R HVQ V +LYWQAV QAR+      D  E VA
Sbjct:  279 TSFDAALQELVEFQQQPKANISNYMVRARRHVQTVKMLYWQAVAQARDHHGSYPDLVECVA 339          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352182 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835ZES8_9STRA3.470e-220100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CJH7_9STRA7.950e-1368.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YLH3_9STRA4.940e-1065.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z8X0_9STRA2.140e-962.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YMC2_9STRA7.290e-962.30Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..503
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 432..473
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..255

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_111contigContig_111:274022..277076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352182mRNA_11887Tribonema minus UTEX_B_3156 mRNAContig_111 274022..277076 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352182|estExt_Genemark1.C_Ctg_1110032 ID=Trimin1|352182|estExt_Genemark1.C_Ctg_1110032|Name=jgi.p|Trimin1|352182|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=529bp
MGVGANLQPERQKHLLSSSFDAALQELIEFQQQPKEDISTDMVLSRLHVQ
EVNVLYWQAVTQAREKGRKLLDAPEAVAGAVAAGAAAAARAQVAEETDAL
DTVLRTLVAAAARTQGRAAKLAAANTALAGRADDVIAQLQRAQATAQAAI
ARTATANGNVTAGTTAAAAATAAAGSGVVPPAARRASAPAPSQTSRTAPP
QIHAGNGGDTNAAAASPHAAGEWRRASTGTLPRTPPPQPPRAAPTVPATA
APTIKHAAAAIAEQALRPPSRITASAAAAQAAAGAAAVCGSAAKVAAPRA
AAAAAAAPAPRAPPAAAAAVSPLSKPVMITPVKLAATAPATPVDATPPTV
AATASPSKSPPRRGVSLKKLGEQLSARLLCDGSSKGKDGRGGGGGSGAGK
KAGRRAESQEGGRSNGAAAAAATRDRELLDLYEQLQQQQEPRQWQESRAP
PLSPQPQQQQQQRRRQQLSPLSTARAAAADAAWRTHRDQQRQQWQRAKGV
PVSPIGSSKALAAAAVRVTAEGRYSPRA*
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