Trimin1|350361|estExt_Genemark1.C_Ctg_610047 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350361
Unique NameTrimin1|350361|estExt_Genemark1.C_Ctg_610047
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length165
Homology
BLAST of jgi.p|Trimin1|350361 vs. uniprot
Match: A0A836CA80_9STRA (Armet protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA80_9STRA)

HSP 1 Score: 322 bits (826), Expect = 1.820e-111
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
Query:    1 MKVVSVVFAGALVGLAAVGAAPAANPKECEVCISVLEKVEGLLNAADTKNKDKIEEAIEKYCSQKLPAKDDKMCYNLVTIKKHVSQPFSLGLPKLKVCQRLKKDNADICNMQYPIKVDKGNVDYNTLRVKALKSILAERGARCDGCIEKSDYVKRCKETENMEL 164
            MKVVSVVFAGALVGLAAVGAAPAANPKECEVCISVLEKVEGLLNAADTKNKDKIEEAIEKYCSQKLPAKDDKMCYNLVTIKKHVSQPFSLGLPKLKVCQRLKKDNADICNMQYPIKVDKGNVDYNTLRVKALKSILAERGARCDGCIEKSDYVKRCKETENMEL
Sbjct:    1 MKVVSVVFAGALVGLAAVGAAPAANPKECEVCISVLEKVEGLLNAADTKNKDKIEEAIEKYCSQKLPAKDDKMCYNLVTIKKHVSQPFSLGLPKLKVCQRLKKDNADICNMQYPIKVDKGNVDYNTLRVKALKSILAERGARCDGCIEKSDYVKRCKETENMEL 164          
BLAST of jgi.p|Trimin1|350361 vs. uniprot
Match: A0A6H5KPX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX9_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 2.070e-62
Identity = 94/145 (64.83%), Postives = 117/145 (80.69%), Query Frame = 0
Query:   20 AAPAANPKECEVCISVLEKVEGLLNAADTKNKDKIEEAIEKYCSQKLPAKDDKMCYNLVTIKKHVSQPFSLGLPKLKVCQRLKKDNADICNMQYPIKVDKGNVDYNTLRVKALKSILAERGARCDGCIEKSDYVKRCKETENMEL 164
            AAP A+PKECEVC++VLE++   + AAD KNKDKIE AI+ +C Q+L ++DDKMCY  + IKK +S PFS G+PK KVCQRLK  NA++C ++YPIKVDK N+DYN LRVK LK ILA+RG  CDGC+EKSDYV RCK TE++EL
Sbjct:   97 AAPRADPKECEVCVNVLEQISESMPAADRKNKDKIEAAIDAFCDQRLSSRDDKMCYYFLPIKKTISHPFSTGMPKSKVCQRLKASNAEVCEIKYPIKVDKENMDYNKLRVKQLKGILADRGVDCDGCLEKSDYVARCKATEHLEL 241          
BLAST of jgi.p|Trimin1|350361 vs. uniprot
Match: A0A7S2Y4H6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y4H6_9STRA)

HSP 1 Score: 179 bits (455), Expect = 5.980e-55
Identity = 90/141 (63.83%), Postives = 111/141 (78.72%), Query Frame = 0
Query:   25 NPKECEVCISVLEKVEGLLNAADTKNKDKIEEAIEKYCSQK-LPAKDDKMCYNLVTIKKHVSQPFSLGLPKLKVCQRLKKDNADICNMQYPIKVDKGNVDYNTLRVKALKSILAERGARCDGCIEKSDYVKRCKETENMEL 164
            +PK CEVCI+VLE+++  ++ AD KNK KIE AI+ +C QK L AKD KMCY L  IK+ VSQPFS G+PK KVCQRL KDN DIC ++YP+KV+K + DY+ LRVKALK ILAERG  C GC+EK DYVKRC+ET +M+L
Sbjct:   26 DPKACEVCINVLEQIDATMDKADKKNKPKIEAAIDAFCDQKMLNAKDKKMCYYLDPIKRAVSQPFSTGMPKNKVCQRLTKDNPDICAVKYPMKVEK-DTDYSKLRVKALKQILAERGVECTGCLEKPDYVKRCEETAHMDL 165          
BLAST of jgi.p|Trimin1|350361 vs. uniprot
Match: D8LUC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUC3_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 1.440e-53
Identity = 81/120 (67.50%), Postives = 98/120 (81.67%), Query Frame = 0
Query:   45 AADTKNKDKIEEAIEKYCSQKLPAKDDKMCYNLVTIKKHVSQPFSLGLPKLKVCQRLKKDNADICNMQYPIKVDKGNVDYNTLRVKALKSILAERGARCDGCIEKSDYVKRCKETENMEL 164
            AAD KNKDKIE AI+ +C Q+L ++DDKMCY  + IKK +S PFS G+PKLKVCQRLK  NA++C ++YPIKVDK N+DYN LRVK LK ILA+RG  CDGC+EKSDYV RCK TE++EL
Sbjct:    3 AADRKNKDKIEAAIDAFCDQRLSSRDDKMCYYFLPIKKTISHPFSTGMPKLKVCQRLKASNAEVCEIKYPIKVDKENMDYNKLRVKQLKGILADRGVDCDGCLEKSDYVARCKATEHLEL 122          
BLAST of jgi.p|Trimin1|350361 vs. uniprot
Match: A0A7S2SV22_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV22_9STRA)

HSP 1 Score: 158 bits (400), Expect = 2.050e-46
Identity = 87/169 (51.48%), Postives = 119/169 (70.41%), Query Frame = 0
Query:    1 MKVVSVVFAGALVGLAAVGAAPAA--NPKECEVCISVLEKVEGLLNAADTKNKDKIEEAIEKYCSQK-LPAKDDKMCYNLVTIKKHVSQPFSLGLPKLKVCQRLKKDNADICNMQYPIKVDKGNV--DYNTLRVKALKSILAERGARCDGCIEKSDYVKRCKETENMEL 164
            + VV +  A A++ L +  AA AA  +PKECEVC+ VLE VE LL++ +  +K  IEEA+  +C++K L AK+ KMCYN+  IKK VS PFSL +PK KVCQRLKKDN DIC +++P+KV K     D + LRVK LK IL +RG  C GC+EK+D+VK+  +T+++E 
Sbjct:   11 LAVVVLSLAAAVLALGSPAAAKAAKEDPKECEVCVKVLEDVEALLDSDEKSSKVSIEEALGTHCARKDLSAKEKKMCYNMEPIKKSVSHPFSLRMPKKKVCQRLKKDNPDICEIKFPVKVAKEAKPEDVSKLRVKQLKQILNDRGVECKGCVEKADFVKKVLDTQHLEF 179          
BLAST of jgi.p|Trimin1|350361 vs. uniprot
Match: A0A4D9D3E5_9STRA (Bifunctional lysine-specific demethylase and histidyl-hydroxylase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3E5_9STRA)

HSP 1 Score: 163 bits (413), Expect = 3.620e-44
Identity = 84/153 (54.90%), Postives = 113/153 (73.86%), Query Frame = 0
Query:   11 ALVGLAAVGAAPAANPKECEVCISVLEKVEGLLNAADTKNKDKIEEAIEKYCSQK-LPAKDDKMCYNLVTIKKHVSQPFSLGLPKLKVCQRLKKDNADICNMQYPIKVDKGNVDYNTLRVKALKSILAERGARCDGCIEKSDYVKRCKETENM 162
            AL+GLA    A A++PK+CEVCI VLEK++  + A   KNK  +E+AI+ YCS+K +  K+ K+CY L  IK+ VSQPFS G+PK KVC RLKK +A+IC ++YP+KVD    DY  LRVK LK+ILAERG  C GC+EK D++K+C+ET ++
Sbjct:   15 ALLGLA--NLAHASDPKDCEVCIGVLEKIDAGMEAKAKKNKLAVEDAIDAYCSRKDIDNKEKKLCYFLKPIKRDVSQPFSTGMPKAKVCARLKKKSAEICGIKYPVKVD-SQTDYTKLRVKELKAILAERGVECTGCLEKPDFIKKCEETAHL 164          
BLAST of jgi.p|Trimin1|350361 vs. uniprot
Match: A0A7S2GYF7_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GYF7_9STRA)

HSP 1 Score: 149 bits (375), Expect = 9.570e-43
Identity = 77/150 (51.33%), Postives = 106/150 (70.67%), Query Frame = 0
Query:   18 VGAAPAANPKECEVCISVLEKVEGLLNAADTKNKDKIEEAIEKYC-SQKLPAKDDKMCYNLVTIKKHVSQPFSLGLPKLKVCQRLKKDNADICNMQYPIKV--DKGNVDYNTLRVKALKSILAERGARCDGCIEKSDYVKRCKETENMEL 164
            VG A   +P ECEVCI VLE ++  +   +  +K  IEEAI KYC S +L  K+ KMCY +  IK++++ PFSL +PK +VC+RLKKDN DICN++Y +KV  D    D + LRVKALK+IL +RG  C+GC+EK+DYVK+  +T +M+L
Sbjct:   21 VGKAKTPDPAECEVCIKVLETIDDTIPKDEKTSKTSIEEAIGKYCASSELGQKEKKMCYYMDPIKRNIAHPFSLKMPKDRVCKRLKKDNEDICNVKYAVKVAKDSSAKDVSKLRVKALKAILNDRGVDCNGCLEKADYVKQVMDTAHMDL 170          
BLAST of jgi.p|Trimin1|350361 vs. uniprot
Match: A0A7S0XC71_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XC71_9STRA)

HSP 1 Score: 145 bits (365), Expect = 4.740e-41
Identity = 76/159 (47.80%), Postives = 103/159 (64.78%), Query Frame = 0
Query:   21 APAANPKECEVCISVLEKVEGLLNAADTKNKDKIEEAIEKYCS------------QKLPAKDDKMCYNLVTIKKHVSQPFSLGLPKLKVCQRLKKDNADICNMQYPIKVDKGN---VDYNTLRVKALKSILAERGARCDGCIEKSDYVKRCKETENMEL 164
            AP  +P++CEVCI+ LE V+ LL A    +K  IE+AI K C+            +    KD KMCY    IKK +S PF+ G+PK KVCQRL+KDN +IC ++YP+KV+K      DYN L+VK LK IL+ RG  C GC EK ++VK+C+ETE++E+
Sbjct:   26 APTKDPRDCEVCIANLEAVDKLLPADKKSDKAAIEKAIGKRCTLSGFGSEWKPNPELTSPKDVKMCYLFEPIKKSISTPFATGMPKAKVCQRLQKDNPEICEVKYPLKVEKKEGEATDYNKLKVKQLKEILSNRGVTCTGCTEKPEFVKKCQETEHLEM 184          
BLAST of jgi.p|Trimin1|350361 vs. uniprot
Match: A0A7S1GCQ5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GCQ5_9STRA)

HSP 1 Score: 146 bits (368), Expect = 7.770e-41
Identity = 79/163 (48.47%), Postives = 114/163 (69.94%), Query Frame = 0
Query:    4 VSVVFAGALVG-LAAVGAAPAANPKECEVCISVLEKVEGLLNAADTKNKDKIEEAIEKYC-SQKLPAKDDKMCYNLVTIKKHVSQPFSLGLPKLKVCQRLKKDNADICNMQYPIKVDKGNVDYNTLRVKALKSILAERGARCDGCIEKSDYVKRCKETENMEL 164
            V+ V A A++G LA V A    +PKECEVCI+V++ ++ ++ A D K+ DK+E AI KYC S+ L  K+ K CY L  +K+ V+    LG P  + C++LKK N +IC ++YP+KVDK + DY+ LRVK L+ IL  RG  CDGC+EK DY+++C+ETE++EL
Sbjct:   78 VAFVVAVAVLGVLAGVEARTKGDPKECEVCINVVKGIKEIVGA-DNKDSDKVEAAIAKYCKSEGLHPKEKKACYYLQDVKRDVATVIGLGAPDDRACKKLKKKNFEICELRYPLKVDK-DTDYSKLRVKELRKILDGRGVGCDGCLEKGDYIRKCEETEHLEL 238          
BLAST of jgi.p|Trimin1|350361 vs. uniprot
Match: A0A8K1C6F3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6F3_PYTOL)

HSP 1 Score: 141 bits (356), Expect = 6.780e-40
Identity = 67/142 (47.18%), Postives = 98/142 (69.01%), Query Frame = 0
Query:   24 ANPKECEVCISVLEKVEGLLNAADTKNKDKI---EEAIEKYCSQKLPAKDDKMCYNLVTIKKHVSQPFSLGLPKLKVCQRLKKDNADICNMQYPIKVDKGNVDYNTLRVKALKSILAERGARCDGCIEKSDYVKRCKETENM 162
            A+PKECEVC+ V++ V+G+      +   K+   E+A+EKYCS+KL +KD K+CY L  +KK V++  S G   +K+C+ L+K N D C+M+YP+K D  N DY  LRVK LK IL +RG  C GC+EKS+++ + KETE++
Sbjct:   24 ADPKECEVCVKVVDDVKGVYTKLAEEKGKKLAVAEKAVEKYCSKKLSSKDQKLCYFLEPMKKDVARQISFGKDSIKICKTLEKKNPDFCSMRYPVKTD-SNTDYTKLRVKQLKKILGDRGVECVGCVEKSEFIAKIKETEHL 164          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350361 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CA80_9STRA1.820e-111100.00Armet protein n=1 Tax=Tribonema minus TaxID=303371... [more]
A0A6H5KPX9_9PHAE2.070e-6264.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2Y4H6_9STRA5.980e-5563.83Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LUC3_ECTSI1.440e-5367.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2SV22_9STRA2.050e-4651.48Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D3E5_9STRA3.620e-4454.90Bifunctional lysine-specific demethylase and histi... [more]
A0A7S2GYF7_9STRA9.570e-4351.33Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S0XC71_9STRA4.740e-4147.80Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S1GCQ5_9STRA7.770e-4148.47Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A8K1C6F3_PYTOL6.780e-4047.18Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR045332ARMET, N-terminalPFAMPF20145ARMET_Ncoord: 28..114
e-value: 6.3E-17
score: 61.7
IPR019345ARMET, C-terminalPFAMPF10208ARMET_Ccoord: 121..159
e-value: 4.6E-13
score: 48.4
IPR036361SAP domain superfamilyGENE3D1.10.720.30SAP domaincoord: 118..163
e-value: 1.7E-15
score: 58.1
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 122..159
NoneNo IPR availableGENE3D1.10.225.10coord: 24..117
e-value: 1.5E-24
score: 88.5
NoneNo IPR availablePANTHERPTHR12990:SF5MESENCEPHALIC ASTROCYTE-DERIVED NEUROTROPHIC FACTOR HOMOLOGcoord: 8..160
IPR045333ARMET-likePANTHERPTHR12990ARMET-LIKE PROTEINcoord: 8..160
IPR011001Saposin-likeSUPERFAMILY47862Saposincoord: 28..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_61contigContig_61:418074..421127 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350361mRNA_8707Tribonema minus UTEX_B_3156 mRNAContig_61 418016..421227 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350361|estExt_Genemark1.C_Ctg_610047 ID=Trimin1|350361|estExt_Genemark1.C_Ctg_610047|Name=jgi.p|Trimin1|350361|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=165bp
MKVVSVVFAGALVGLAAVGAAPAANPKECEVCISVLEKVEGLLNAADTKN
KDKIEEAIEKYCSQKLPAKDDKMCYNLVTIKKHVSQPFSLGLPKLKVCQR
LKKDNADICNMQYPIKVDKGNVDYNTLRVKALKSILAERGARCDGCIEKS
DYVKRCKETENMEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR045332ARMET_N
IPR019345ARMET_C
IPR036361SAP_dom_sf
IPR045333ARMET-like
IPR011001Saposin-like