Trimin1|350341|estExt_Genemark1.C_Ctg_610014 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350341
Unique NameTrimin1|350341|estExt_Genemark1.C_Ctg_610014
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length799
Homology
BLAST of jgi.p|Trimin1|350341 vs. uniprot
Match: A0A835YMV1_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV1_9STRA)

HSP 1 Score: 1247 bits (3226), Expect = 0.000e+0
Identity = 798/798 (100.00%), Postives = 798/798 (100.00%), Query Frame = 0
Query:    1 MTTPVNVEAAVKAYLRSQGYEDAARAMEEQADKIKSNQARHTGTVSAQPGTEAARRFALSYGFTSPEKLSESVLFSGVLEGKPSRLVELYGMLEAFIAGSLDAYKTELRSVAFPVFAHFYLDLVLRGADKEAKQLMSTWAAEHSLHYEDEANVQPEPEPELQLFTKLYTDKPREVRRTILSGTPKFNAEALVSAGLDVAKVRALSAVTTPEHAAASDLARRLRAHPFRVSLSRTAGALLDAWLARAPSLLPLAAAINTRAALRIEDRPPRQHFEPALCGPAGDTVLWPALPGAHVAAAKRRRGDAEITGQGQRDLALLLDSEWYAEYLRNVVLQPLDPRAAVASAAEALRKAAAPSDADAALADALEPTVLMTTLINTGASLVCVDTAPDAARVAAGFEDCSARVYRSGPQQGAEGSGSEPPPVRLVGHTKPIYSLSWAPDSRFLLTGGGDGVVRLWDLGWSSGSYGERSEEGSGDSPAKCLMAYKGHKCAIWGVDFSPLGYYFASGGADRTARLWSTDRPQPLRLFVGHMGDVTAVRFHPNAAYLATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVGXDDGIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLCKFVHMCVHDAQVSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWDFKVTAHQPASDSAAAAAAAPIVGAPHDKAQSAASACERHTFYTKSTPVYGLRYTDRNLLLAAGPYVDDNETVNSKFPERSPGQRL 798
            MTTPVNVEAAVKAYLRSQGYEDAARAMEEQADKIKSNQARHTGTVSAQPGTEAARRFALSYGFTSPEKLSESVLFSGVLEGKPSRLVELYGMLEAFIAGSLDAYKTELRSVAFPVFAHFYLDLVLRGADKEAKQLMSTWAAEHSLHYEDEANVQPEPEPELQLFTKLYTDKPREVRRTILSGTPKFNAEALVSAGLDVAKVRALSAVTTPEHAAASDLARRLRAHPFRVSLSRTAGALLDAWLARAPSLLPLAAAINTRAALRIEDRPPRQHFEPALCGPAGDTVLWPALPGAHVAAAKRRRGDAEITGQGQRDLALLLDSEWYAEYLRNVVLQPLDPRAAVASAAEALRKAAAPSDADAALADALEPTVLMTTLINTGASLVCVDTAPDAARVAAGFEDCSARVYRSGPQQGAEGSGSEPPPVRLVGHTKPIYSLSWAPDSRFLLTGGGDGVVRLWDLGWSSGSYGERSEEGSGDSPAKCLMAYKGHKCAIWGVDFSPLGYYFASGGADRTARLWSTDRPQPLRLFVGHMGDVTAVRFHPNAAYLATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVGXDDGIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLCKFVHMCVHDAQVSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWDFKVTAHQPASDSAAAAAAAPIVGAPHDKAQSAASACERHTFYTKSTPVYGLRYTDRNLLLAAGPYVDDNETVNSKFPERSPGQRL
Sbjct:    1 MTTPVNVEAAVKAYLRSQGYEDAARAMEEQADKIKSNQARHTGTVSAQPGTEAARRFALSYGFTSPEKLSESVLFSGVLEGKPSRLVELYGMLEAFIAGSLDAYKTELRSVAFPVFAHFYLDLVLRGADKEAKQLMSTWAAEHSLHYEDEANVQPEPEPELQLFTKLYTDKPREVRRTILSGTPKFNAEALVSAGLDVAKVRALSAVTTPEHAAASDLARRLRAHPFRVSLSRTAGALLDAWLARAPSLLPLAAAINTRAALRIEDRPPRQHFEPALCGPAGDTVLWPALPGAHVAAAKRRRGDAEITGQGQRDLALLLDSEWYAEYLRNVVLQPLDPRAAVASAAEALRKAAAPSDADAALADALEPTVLMTTLINTGASLVCVDTAPDAARVAAGFEDCSARVYRSGPQQGAEGSGSEPPPVRLVGHTKPIYSLSWAPDSRFLLTGGGDGVVRLWDLGWSSGSYGERSEEGSGDSPAKCLMAYKGHKCAIWGVDFSPLGYYFASGGADRTARLWSTDRPQPLRLFVGHMGDVTAVRFHPNAAYLATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVGXDDGIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLCKFVHMCVHDAQVSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIWDFKVTAHQPASDSAAAAAAAPIVGAPHDKAQSAASACERHTFYTKSTPVYGLRYTDRNLLLAAGPYVDDNETVNSKFPERSPGQRL 798          
BLAST of jgi.p|Trimin1|350341 vs. uniprot
Match: A0A2P6TUX6_CHLSO (Transcription initiation factor TFIID subunit 5 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TUX6_CHLSO)

HSP 1 Score: 172 bits (435), Expect = 3.140e-41
Identity = 171/573 (29.84%), Postives = 230/573 (40.14%), Query Frame = 0
Query:    6 NVEAAVKAYLRSQGYEDAARAMEEQADKIKSNQARHTGTVSAQPGTEAARRFALSYGFTSPEKLSESVLFSGVLEGKPSRLVELYGMLEAFIAGSLDAYKTELRSVAFPVFAHFYLDLVLRGADKEAKQLMSTWAAEHSLHYEDEANVQPEPEPELQLFTKLYTDKPREVRRTILSGTPKFNAEALVSAGLDVAKVRALSAVTTPEHAAASDLARRLRAHPFRVSLSRTAGALLDAWLARAPSLLPLAAAINTRAALRIEDRPPRQHFEPA---------------------------LCGPAGDTVLWPALPGAHVAAAKRRRGDAEITGQGQRDLALLLDSEWYAEYLRNVVLQPLDPRAAVASAAEA-LRKAAA---PSDADAALADALEPTVLMTTLINTGASLVCVDTAPDAARVAAGFEDCSARVYRSGPQQGAEGSGSEPPPVRLVGHTKPIYSLSWAPDSRFLLTGGGDGVVRLWDLGWSSGSYGERSEEGSGDSPAKCLMAYKGHKCAIWGVDFSPL--GYYFASGGADRTARLWSTDRPQPLRLFVGHMGDVTAVRFHPNAAY 545
            +V+  V  YLR + +++A + +E     ++  +A  TG + AQ             G    E + E +LF+   EG P+ LV+ +    A++  SLD YK EL  V FP FAH YL+LV  GA  EA+ LM     EH   + D                             I +G      +AL            L+ +++ E  AAS  A  LR   F + L R +  LL   L + P  L +   +N      + D  P    E A                           L G   D         A   A ++ + +A    Q                      + P  P  A A +AE  L K  A   P  A+A       P+    T  NT  SL CV    DA+ VA GF D S R+Y    +  A G+G         GH+ P+Y L ++PD+  L +  GDG VRLW            S E   +     L  Y+GH   +W V   P    +YFAS GADRTAR+WSTDR QPLRLFVGH  DV  VR+HPN  Y
Sbjct:    9 DVDRLVLQYLRKRNFKEAEKVLE-----LEIKEAAPTGEMIAQQWL----------GGRGGEGVEEGLLFATAGEGDPAGLVQAFDRFAAWVDNSLDLYKPELARVLFPAFAHTYLNLVAMGAQAEAQTLMG----EHRQRFMD-----------------------------IAAGGSTSRIQALTD----------LAGISSEEAIAASRTAAALRGQRFAIRLCRASYELLAQHL-QLPKQLVMLGVVNEHIKFEVHDGAPATLAELAEVEEDLTAGAMQADVVTINQRSLELQLLQGSVEDRYAQQKAEEAEEVANQKAQAEALTKKQRXXXXXXXXXXXXXXXXXXXXRMAPKFPLPAPAESAEDYLMKELAQRVPLSAEAL------PSCAFFTFFNTAQSLNCVAFTSDASIVAGGFADSSVRLYDLQARAAAGGAGDWV--TYFSGHSGPVYGLDFSPDNELLFSASGDGTVRLW------------SREVQAN-----LSVYRGHMLPVWDVSACPYFAPFYFASCGADRTARMWSTDRTQPLRLFVGHTSDVDVVRWHPNCHY 497          
BLAST of jgi.p|Trimin1|350341 vs. uniprot
Match: E1ZEQ5_CHLVA (LisH domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZEQ5_CHLVA)

HSP 1 Score: 154 bits (388), Expect = 4.430e-35
Identity = 174/599 (29.05%), Postives = 251/599 (41.90%), Query Frame = 0
Query:    6 NVEAAVKAYLRSQGYEDAARAME-EQADKIKSNQARHTGTVSAQPGTEAARRFALSYGFTSPEKLSESVLFSGVLEGKPSRLVELYGMLEAFIAGSLDAYKTELRSVAFPVFAHFYLDLVLRGADKEAKQLMSTWAAEHSLHYEDEA----NVQPEPEPEL--------------------------------QLFTKLYTDKPREVRRTILSGTPKFNAEALV----SAGLDVAKVRALSAVTTPEH--AAASDLA---RRLRAHPFRVSLSRTAGALLDAWLARAPSLLPLAAAINTRAAL---RIEDRPPRQHFEPALCGPAGDTVLWPALPGAHVAAAKRRRGDAEITGQGQRDLAL---LLDSEWYAEYLRNVVLQPLDPRAAVASAAEALRKAAAPSDADAALADALEPTVLMTTLINTGASLVCVDTAPDAARVAAGFEDCSARVYRSGPQQGAEGSGSEPPP--VRLVGHTKPIYSLSWAPDSRFLLTGGGDGVVRLWDLGWSSGSYGERSEEGSGDSPAKCLMAYKGHKCAIWGVD----FSPLGYYFASGGADRTARLWSTDRPQPLRLFVGHMGDVTAVRFHPNAAYL 546
            +++  V  YLR + +++A + +E E  + I              P  E   +  L +G    E + E +LF+   EG P+ LV+ +  L A++  SLD Y  EL  V FP FAH YL+L+  GA  EA+QLM      H   + D A    N++ +   +L                                 L T+      + V   I++   KF A  L     +AG  +A    L  +   E   A  +DLA     L A   +  +  T    L   L +A + L  AAA +    L   R  +        PA+ G   D   W            +++ +AE   + +R +AL                  + P  P   ++   E +           + AD+L P+    T  NT  SL CV  + DAA VA GF D S R+Y    +     +G+ P        GH+ P++ L ++PD++ L +  GDG VRLW +   +                  L  YKGH+  +W V     FSP  +YFAS GADRTARLWSTDR QPLRLFVGH  DV  VR+HPN  Y+
Sbjct:    9 DIDRLVLEYLRKRNFKEAEKVLELEMKESI--------------PAGELLVQSWLGWG---GEGVEERLLFATAGEGDPAELVQAFDRLAAWVDNSLDIYNPELSRVLFPAFAHTYLNLINIGAMPEAQQLMGA----HRQRFLDAAVGGSNLRMQELQDLASISSAEAAAASRTASALRSRRLSIRLCRASYDLLTQFLQGPKQLVMLGIVNEHIKFEARMLAGEPAAAGSTLAAFPRLLLLLVVEGRPATLADLAGVEEDLTAGAMQADVVATNQFPLQLRLLQARACLFRAAAASAGMGLQQGRQAEEEADAASSPAIWGSVEDK--WAQQQAEKAEDEAQKQAEAEALTKKKR-IALQRXXXXXXXXXXXXXXXXVAPKFPLPPISDEQEGMLMQELQLRQQVS-ADSL-PSCCFFTFFNTHQSLNCVAFSSDAAAVAGGFADSSVRLYDLQARASGAAAGAAPADWVTYFAGHSGPVFGLDFSPDNQLLFSASGDGSVRLWSMEVRAN-----------------LAVYKGHQLPVWDVATCPYFSP--FYFASCGADRTARLWSTDRVQPLRLFVGHTSDVDVVRWHPNCHYI 562          
BLAST of jgi.p|Trimin1|350341 vs. uniprot
Match: F0Y6S0_AURAN (TFIID_NTD2 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6S0_AURAN)

HSP 1 Score: 142 bits (357), Expect = 8.870e-32
Identity = 145/470 (30.85%), Postives = 201/470 (42.77%), Query Frame = 0
Query:   99 GSLDAYKTELRSVAFPVFAHFYLDLVLR--------GADKEAKQLMSTWAAEHSLHYEDEANVQPEPEPELQLFTKLYTDKPREVRRTILSGTPKFNAEALVSAGLDVAKVRALSAVTTPEHAAASDLARRLRAHPFRVSLSRTAGALLDAWLARAPSLLPLAAAINTRAALRIEDRPPRQHFEPALCGPAGDTVLWPALPGAHVAAAKRRRG---DAEITGQGQ---RDLALLLDSEWYAEYLRNVVLQPLDPRAAVASAAEALRKAAAPSDADAALADALEPTVLMTTLINTGAS-LVCVDTAPDAARVAAGFEDCSARVYRSGPQQG--AEGSGSEPPPVRLVGHTKPIYSLSWAPDSRFLLTGGGDGVVRLWDLGWSSGSYGERSEEGSGDSPAKCLMAYKGHKCAIWGVDFSPL--GYYFASGGADRTARLWSTDRPQPLRLFVGHMGDVTAVRFHPNAAYLATA 549
            G+L++ + EL +  FPVFA  +L +V          G +  ++  +  W A H+                                        +F AE           V AL  VT+P  AA      RLR   + V LS  A ALL  +L    +   L    N +  L  +   P +    AL   +GD V   A   A  A    R G    +E    G    R  A   D ++    LR+   +PL P       A  + +  AP DA       L+PTVL   +    A+ L C   + DA R+A GF D S R++R     G  A  S +E     LV H +P+Y+L+W+ +SR+LL+GGGDG   LWD          R   G+  +P   L +Y  H    W V +     G+ FA+GG DRTARL++TDR  PLR+F GH  DV+AV FH NA Y+ +A
Sbjct:   31 GALESVRCELSATLFPVFAQCFLVVVATEAEASGEDGGEPASRAFLERWGASHA---------------------------------------DRFAAE-----------VEALRLVTSPVVAAKDAYCARLRGGRWVVPLSGAAQALLGDFLTSTGNAAVLKV-FNEKVTL--DGTAPGRGEAAALVETSGDEVEAAAAARAGAAPPPARLGVLLGSEALDGGAPAGRAPAPDWDDDYGRGLLRDGSRRPLAPP----PPAGLVGRGRAPLDA-------LKPTVLDARVAGADAARLSCCAASRDATRLAGGFADASLRLWRVDELAGDDAGSSDAEAATTALVAHDRPVYALAWSSESRYLLSGGGDGCCVLWDADAPG-----RGGPGASGAP---LCSYAAHVAPCWSVAWCAASGGHVFATGGGDRTARLFATDRADPLRVFAGHWADVSAVCFHANAHYVLSA 428          
BLAST of jgi.p|Trimin1|350341 vs. uniprot
Match: D7FXT3_ECTSI (TFIID and SAGA subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT3_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 5.430e-28
Identity = 129/458 (28.17%), Postives = 180/458 (39.30%), Query Frame = 0
Query:   50 GTEAARRFALSYGFTSPEKLSESVLFSGVLEGKPSRLVELYGMLEAFIAGSLDAYKTELRSVAFPVFAHFYLDLVLRGADKEAKQLMSTWAAEHSLHYEDEANVQPEPEPELQLFTKLYTDKPREVRRTILSGTPKFNAEALVSAGLDVAKVRALSAVTTPEHAAASDLARRLRAHPFRVSLSRTAGALLDAWLARAPSLLPLAAAINTRAALRIEDRPPRQHFEPALCGP--AGDTVLWPAL------------------------PGAHVAAAKRRRG----------------DAEITGQGQRDLALLL------DSEWYAEYLRNVVLQPLDPRAAVASAAEALRKAAAPSDADAALADALEPTVLMTTLINTGASLVCVDTAPDAARVAAGFEDCSARVYRSGPQQGAEGSGSEPPPVRLVGHTKPIYSLSWAPDSRFLLTGGGDGVVRLWDL 459
            G +  R FA   G  +  +  +SV+  G+LEG P ++ + Y  L  F+A S + Y+ EL +V FPVF H YL LV+     EA+ LM  W  EH   ++DE  +                                                  L  VT  EHA ASD  + +  H FRV +      LL+A+L     LL +   +NTR    +E+R P    +   CGP  A    L P                          P A    A R  G                +  +  Q +RD++L L      D      YLR + L+PLD  A +          A P      LA+ L P V+M T  N   +L C+    D      G +   A           +   ++   VRLVGH++P+Y +SW+PD RFLL+ GGDG VRLWD+
Sbjct:   70 GGDDVRAFARRQGMDAAVRDGDSVMAWGILEGSPEKVEQAYRGLSEFVAASWELYRPELEAVMFPVFVHCYLTLVMFDHGAEARGLMRAWGGEHEERFKDEMTL--------------------------------------------------LKMVTAREHAEASDYCKLVLTHKFRVKICLATSKLLNAFLVN-KGLLLVMHILNTRVQFVLEERSPLPFAQVVRCGPDDAFPAALRPRSSDXXXXXXXXXXXXXXXXXKATKEPAAPATTAGRGGGRGVQEEDLKWAAAPPMEVALMKQTERDVSLPLKPPPQPDPPENWPYLR-LALRPLDS-AQLKDTLSTPEGGARPF-----LANPLSPHVVMVTFYNAVDTLCCLKPTRD------GMQRNGAAXXXXXXXXXQDSGLADT--VRLVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDI 461          
BLAST of jgi.p|Trimin1|350341 vs. uniprot
Match: A0A8J2SGI8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SGI8_9STRA)

HSP 1 Score: 117 bits (294), Expect = 7.530e-24
Identity = 77/187 (41.18%), Postives = 99/187 (52.94%), Query Frame = 0
Query:  364 DALEPTVLMTTLINTGASLV-CVDTAPDAARVAAGFEDCSARVYRSGPQQGAEGSGSEPPPVRLVGHTKPIYSLSWAPDSRFLLTGGGDGVVRLWDLGWSSGSYGERSEEGSGDSPAKCLMAYKGHKCAIWGV------DFSPLGYYFASGGADRTARLWSTDRPQPLRLFVGHMGDVTAVRFHPNA 543
            DAL+PTVL   ++   A  V CV  + D  R  AGF D + R++R  P    +   +  P   L  H   + S+SWA  SR+ L+ G DG V LWD           ++EG G +P   L  Y  H  A W V      D    G  FA+GGADRT RL+STDR +PLR+F GH  DVT+V+ HPNA
Sbjct:  252 DALKPTVLGLCIVGGDAQRVSCVQGSDDTTRCIAGFADSTVRIWR--PDAVEDDDKNRRPSKPLAAHVGGVSSVSWAGGSRYALSSGNDGAVVLWDAD-------APNDEGEG-AP---LQRYAAHADACWSVHSPSSSDSLGGGRIFATGGADRTCRLFSTDRTRPLRIFAGHWSDVTSVKIHPNA 425          
BLAST of jgi.p|Trimin1|350341 vs. uniprot
Match: A0A2K3D4K9_CHLRE (TFIID_NTD2 domain-containing protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3D4K9_CHLRE)

HSP 1 Score: 118 bits (295), Expect = 1.310e-23
Identity = 75/220 (34.09%), Postives = 102/220 (46.36%), Query Frame = 0
Query:  365 ALEPTVLMTTLINTGASLVCVDTAPDAARVAAGFEDCSARVY---------------RSGPQQGA-------EGSGSEPPP-------------VRLVGHTKPIYSLSWAPDSRFLLTGGGDGVVRLWDLGWSSGSYGERSEEGSGDSPAKCLMAYKGHKCAIWGVDFSPLGYYFASGGADRTARLWSTDRPQPLRLFVGHMGDVTAVRFHPNAAYLATA 549
            A  P+    T +N   +L C     D +++ AGF D S RVY               R G   G        +G+ +  PP             + L GHT  ++++ ++ D R +L+G  DG VR+W   + S                 CL  Y GH   +W V   PLG++FAS GADR ARLW ++R QPLRL VGH  DV  VR+HPN   +ATA
Sbjct:  382 ATPPSCAFFTFVNAKQTLNCSTFNCDGSKIVAGFNDSSVRVYDMPTISQHHALLRRSRRGQVPGGXXXXTNPDGTPAPAPPSADDLEESEPPGTLYLHGHTAAVHAVDFSVDQRLVLSGSSDGTVRVWGAEFGS-----------------CLAVYPGHVFPVWDVAACPLGHWFASAGADRVARLWVSERTQPLRLLVGHNADVDVVRWHPNCCLVATA 584          
BLAST of jgi.p|Trimin1|350341 vs. uniprot
Match: A0A1Y1YRP4_9FUNG (WD40 repeat-like protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YRP4_9FUNG)

HSP 1 Score: 114 bits (286), Expect = 1.100e-22
Identity = 130/521 (24.95%), Postives = 209/521 (40.12%), Query Frame = 0
Query:   63 FTSPEKLS--ESVLFSGVLE-GKPSRLVELYGMLEAFIAGSLDAYKTELRSVAFPVFAHFYLDLVLRGADKEAKQLMSTWAAEHS-LHYED----EANVQP---EPEPELQLFTK-----LYTDKPREVRRTILSGTPKFNAEALVSAGLDVAKVRALSAVTTPEHAAASDLARRLRAHPFRVSLSRTAGALLDAWLARAPSLLPLAAAINTRAALRIEDRPPRQHFEPALCGPAGDTVLWPALPGAHVAAAKRRRGDAEITGQGQRDLALLLDSEWYAEYLRNVVLQPLDPRAAVASAAEALRKAAAPSDADAALADALEPTVLMTTLINTGASLVCVDTAPDAARVAAGFEDCSARVYR-SGPQQGAEGSGSEPPPV------------------RLVGHTKPIYSLSWAPDSRFLLTGGGDGVVRLWDLGWSSGSYGERSEEGSGDSPAKCLMAYKGHKCAIWGVDFSPLGYYFASGGADRTARLWSTDRPQPLRLFVGHMGDVTAVRFHPNAAYLAT 548
            FTS ++ S  + +LF    E G P    + Y  L  +I  SLD YK EL+ V +P++ H +LDLV +G  ++A++   ++ ++H   H  D    EA  +P   E  P +Q++ K       T+   E+  + L          +V+  L++  +     V    H   +   +     P ++       AL D                    AL+  D   +        GP  D++       + V   K+ + D    G  + D+ L               ++  D +A + S  + LRK          L     P++ M T  NT  SL CV    DA+ VA GF +   +V+   G +     S   P  +                  +L+GH+ P++ LS++ D+++L++   D  VRLW +   +                  L++YKGH   +W VDF PL               WS D   PLR+F GH+ DV  V+FHPN+ YL T
Sbjct:   51 FTSQDEASVPDYLLFYNEAEQGNPDAYGDSYLSLRRWIENSLDLYKGELKVVLYPIYIHAFLDLVSKGYREQAQEFFKSYKSDHEEFHTPDIQRLEAVTEPQHVEENPLVQIYRKNKYNLKMTNVTFELFISFLQDNKFMLLLRIVNQYLNIQDIETEEGVGITGHK--THQLKAFNQQPVQLGQLPPDPALKD----------------EVERALKENDEKAKAD------GPETDSIA-----SSLVEEYKKVKVDGAQDGPTREDIPL-------------PPIKGFDIQAEIDSIVD-LRKRLK-------LGPGALPSICMYTFHNTSGSLNCVSMTEDASLVAGGFSESYIKVWSLKGEKLKGFRSNFNPAHINDASDLNRLKERQGHEYKKLIGHSGPVFGLSFSHDNKYLVSSSEDSTVRLWSMDTYTN-----------------LVSYKGHNYPVWDVDFGPL---------------WSCDHISPLRIFAGHLSDVDCVKFHPNSKYLVT 489          
BLAST of jgi.p|Trimin1|350341 vs. uniprot
Match: A0A7S1D7F8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7F8_CYCTE)

HSP 1 Score: 106 bits (265), Expect = 2.960e-21
Identity = 61/157 (38.85%), Postives = 78/157 (49.68%), Query Frame = 0
Query:  424 VRLVGHTK--PIYSLSWAPDSRFLLTGGGDGVVRLWDLGWSSGSYGE---------------RSEEGSG------------DSPAKCLMAYKGH--KCAIWGVDFSPLGYYFASGGADRTARLWSTDRPQPLRLFVGHMGD-VTAVRFHPNAAYLAT 548
            + L+GH    P++ + W  D R LL+ GGDG +RLWD     G +G                 SEEG G            D     L  Y+GH   C IW V F+P GYYFAS G+D T R+++TDRP P+R+  GH    V  VR+HPN  Y  T
Sbjct:    9 IVLLGHKNGFPVFDVDWNRDGRTLLSAGGDGTIRLWDAS-VKGPFGTVATVTRRVTAAKPEPSSEEGPGMTVPGLKDESTEDVAGAALAVYRGHAPSCPIWSVSFAPSGYYFASAGSDGTGRIFTTDRPAPVRILSGHTSSSVNCVRWHPNCNYALT 164          
BLAST of jgi.p|Trimin1|350341 vs. uniprot
Match: A0A8J4YTJ1_9CHEL (Transcription initiation factor TFIID subunit 5 n=4 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4YTJ1_9CHEL)

HSP 1 Score: 110 bits (276), Expect = 3.110e-21
Identity = 133/552 (24.09%), Postives = 215/552 (38.95%), Query Frame = 0
Query:   72 SVLFSGVLEGKPSRLVELYGMLEAFIAGSLDAYKTELRSVAFPVFAHFYLDLVLRGADKEAKQLMSTWAAEHSLHYEDEANVQPEPEPELQLFTKLYTDKPREVRRTILSGTPKFNAEALVSAGLDVAKVRALSAVTTPEHAAASDLARRLRAHPFRVSLSRTAGALLDAWLARAPSLLPLAAAINTRAALRIEDRPPRQHFEP-----ALCGPA----GDTVLWPAL---PGAHVAA----------AKRRRGDAEITGQGQRD-----LALLLDSEWYA------EYLRNVV-LQPLDPRAAVASAAEALRKAAAPSDADAALADALE---------PTVLMTTLINTGASLVCVDTAPDAARVAAGFEDCSARVY----------RSGPQQGAEGSGSEPPPVRLV------------GHTKPIYSLSWAPDSRFLLTGGGDGVVRLWDLG-WSSGSYGERSEEGSGDSPAKCLMAYKGHKCAIWGVDFSPL--------------GYYFASGGADRTARLWSTDRPQPLRLFVGHMGDVTAVRFHPNA 543
            +VL +   EG P    + Y  L+ FI  +LD YK EL  + +PVF H YL+LV    + +A + M  ++AE   +++D+                                                  ++ LS V   EH   ++L    +   F + +SR + A L   L      + L   I     L I +   R   +      A+CG A      T ++  L   P  H+             K+ + D  ++ + + D     L  L   E ++      EY+  V  L+  D           LR+ A   D   A+ ++L+         P++   T+IN   ++  +    DA+ +AAGF +   +V+          R   +       ++   VR+V            GH+ P+Y++S++ +   LL+   D  +RLW L  W++                  L+ YKGH   +W V F+                G YFA+ G DRTAR WSTD  QPLRLF+GH+ D+  + FHPN+
Sbjct:   90 NVLSTYKSEGNPDIYDDTYTNLKKFIESALDTYKHELAMIVYPVFVHMYLELVYNEHEAQAFRFMEKFSAEQESYHQDD--------------------------------------------------IKRLSTVKKKEHMKGTELIDNFKTSQFTIRMSRDSCAFLKKHLQEKKQNV-LLNIIQEHLYLDIYEGITRSKQQVDATAGAMCGEAIRQANKTKVYYGLLKEPELHIPIDDEEDGVEPKKKKAKKDPMLSKKSKNDPNAPSLTRLPLPELFSATPENKEYMVVVFNLKSADDFLNKTEQKRDLRRDADKLDKVNAMRESLKRVKLGSNNLPSISFYTVINAHQTVTSISICEDASFLAAGFSNSFIKVWSLTQDKLKKMRVSQELSQIDKEADDVLVRMVSDKGNADCRCLYGHSGPVYAISFSHNKTSLLSCSEDSTIRLWSLQTWTN------------------LVCYKGHNYPVWDVKFNNFFQNELCWYFIYSLQGNYFATCGHDRTARFWSTDHHQPLRLFIGHISDIDCIEFHPNS 572          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350341 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YMV1_9STRA0.000e+0100.00WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A2P6TUX6_CHLSO3.140e-4129.84Transcription initiation factor TFIID subunit 5 n=... [more]
E1ZEQ5_CHLVA4.430e-3529.05LisH domain-containing protein n=1 Tax=Chlorella v... [more]
F0Y6S0_AURAN8.870e-3230.85TFIID_NTD2 domain-containing protein n=1 Tax=Aureo... [more]
D7FXT3_ECTSI5.430e-2828.17TFIID and SAGA subunit n=1 Tax=Ectocarpus siliculo... [more]
A0A8J2SGI8_9STRA7.530e-2441.18Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A2K3D4K9_CHLRE1.310e-2334.09TFIID_NTD2 domain-containing protein n=4 Tax=Chlam... [more]
A0A1Y1YRP4_9FUNG1.100e-2224.95WD40 repeat-like protein n=1 Tax=Basidiobolus meri... [more]
A0A7S1D7F8_CYCTE2.960e-2138.85Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A8J4YTJ1_9CHEL3.110e-2124.09Transcription initiation factor TFIID subunit 5 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 17..37
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 485..517
score: 10.653776
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 613..643
score: 8.729241
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 527..566
score: 9.335602
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 426..459
score: 14.001942
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 571..608
score: 9.520146
NoneNo IPR availableCDDcd00200WD40coord: 426..713
e-value: 5.12151E-68
score: 224.907
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 445..459
score: 37.45
coord: 700..714
score: 39.47
coord: 504..518
score: 35.14
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 564..603
e-value: 4.3E-8
score: 42.9
coord: 676..713
e-value: 1.3
score: 16.2
coord: 520..561
e-value: 8.1E-6
score: 35.3
coord: 478..517
e-value: 9.4E-10
score: 48.4
coord: 606..645
e-value: 2.6E-6
score: 37.0
coord: 419..458
e-value: 4.7E-10
score: 49.4
coord: 368..407
e-value: 5.8
score: 12.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 426..458
e-value: 8.2E-8
score: 32.8
coord: 480..517
e-value: 1.5E-7
score: 32.0
coord: 608..643
e-value: 6.1E-4
score: 20.5
coord: 690..713
e-value: 0.097
score: 13.6
coord: 565..603
e-value: 2.3E-5
score: 25.0
coord: 522..561
e-value: 9.9E-8
score: 32.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 485..526
score: 13.382416
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 693..715
score: 10.14085
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 613..643
score: 10.374778
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 426..459
score: 17.058418
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 571..612
score: 12.914561
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 527..570
score: 12.413288
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 521..652
e-value: 6.4E-39
score: 135.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 653..784
e-value: 2.5E-7
score: 32.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 360..520
e-value: 3.2E-30
score: 107.5
IPR037264TFIID subunit TAF5, NTD2 domain superfamilyGENE3D1.25.40.500TFIID subunit TAF5, NTD2 domaincoord: 64..265
e-value: 5.3E-27
score: 96.6
IPR037264TFIID subunit TAF5, NTD2 domain superfamilySUPERFAMILY160897Taf5 N-terminal domain-likecoord: 200..259
IPR037264TFIID subunit TAF5, NTD2 domain superfamilySUPERFAMILY160897Taf5 N-terminal domain-likecoord: 73..149
IPR007582TFIID subunit TAF5, NTD2 domainPFAMPF04494TFIID_NTD2coord: 81..150
e-value: 4.5E-15
score: 56.1
IPR037783Transcription initiation factor TFIID subunit 5PANTHERPTHR19879TRANSCRIPTION INITIATION FACTOR TFIIDcoord: 5..643
coord: 659..779
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 548..562
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 700..714
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 445..459
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 3..35
score: 7.647687
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 367..677
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 657..715

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_61contigContig_61:123232..132728 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350341mRNA_8668Tribonema minus UTEX_B_3156 mRNAContig_61 123232..132798 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350341|estExt_Genemark1.C_Ctg_610014 ID=Trimin1|350341|estExt_Genemark1.C_Ctg_610014|Name=jgi.p|Trimin1|350341|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=799bp
MTTPVNVEAAVKAYLRSQGYEDAARAMEEQADKIKSNQARHTGTVSAQPG
TEAARRFALSYGFTSPEKLSESVLFSGVLEGKPSRLVELYGMLEAFIAGS
LDAYKTELRSVAFPVFAHFYLDLVLRGADKEAKQLMSTWAAEHSLHYEDE
ANVQPEPEPELQLFTKLYTDKPREVRRTILSGTPKFNAEALVSAGLDVAK
VRALSAVTTPEHAAASDLARRLRAHPFRVSLSRTAGALLDAWLARAPSLL
PLAAAINTRAALRIEDRPPRQHFEPALCGPAGDTVLWPALPGAHVAAAKR
RRGDAEITGQGQRDLALLLDSEWYAEYLRNVVLQPLDPRAAVASAAEALR
KAAAPSDADAALADALEPTVLMTTLINTGASLVCVDTAPDAARVAAGFED
CSARVYRSGPQQGAEGSGSEPPPVRLVGHTKPIYSLSWAPDSRFLLTGGG
DGVVRLWDLGWSSGSYGERSEEGSGDSPAKCLMAYKGHKCAIWGVDFSPL
GYYFASGGADRTARLWSTDRPQPLRLFVGHMGDVTAVRFHPNAAYLATAG
GGGDRTARLWDVRSGRCVRVFAGSCAGLSSVAMCPTGRYLAVGGDDGIVR
VWSIATGRQISTLRKHSDAVESLAFSADGAALASGGRDSCVKLCKFVHMC
VHDAQVSPFSADGAVLASGGRDSCVKVRMCARMCLHDSQISLFSADGAAL
ASGSPDSRVKIWDFKVTAHQPASDSAAAAAAAPIVGAPHDKAQSAASACE
RHTFYTKSTPVYGLRYTDRNLLLAAGPYVDDNETVNSKFPERSPGQRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037264TFIID_NTD2_sf
IPR007582TFIID_NTD2
IPR037783Taf5
IPR019775WD40_repeat_CS
IPR006594LisH
IPR036322WD40_repeat_dom_sf