mRNA_8694 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|169009
Unique NamemRNA_8694
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: A0A836CBL9_9STRA (RNA-binding domain of Hu antigen C n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBL9_9STRA)

HSP 1 Score: 195 bits (495), Expect = 6.380e-63
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1 
Query:    1 NNLIVNYLPHAVSSKRLAELFAPYGAVAHAKVVRDRATGGSLGYGFVRFARAAGAAAAATALDGARVGDKRIRVSAARPSSASIRRCKLHVAGLPVRERLCFSI 312
            NNLIVNYLPHAVSSKRLAELFAPYGAVAHAKVVRDRATGGSLGYGFVRFARAAGAAAAATALDGARVGDKRIRVSAARPSSASIRRCKLHVAGLPVRERLCFSI
Sbjct:    1 NNLIVNYLPHAVSSKRLAELFAPYGAVAHAKVVRDRATGGSLGYGFVRFARAAGAAAAATALDGARVGDKRIRVSAARPSSASIRRCKLHVAGLPVRERLCFSI 104
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BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: A0A835ZHQ1_9STRA (Hud and Au-rich element of the tumor necrosis factor alpha Rna (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ1_9STRA)

HSP 1 Score: 119 bits (298), Expect = 4.590e-32
Identity = 66/106 (62.26%), Postives = 77/106 (72.64%), Query Frame = 1 
Query:    4 NLIVNYLPHAVSSKRLAELFAPYGAVAHAKVVRDRATGGSLGYGFVRFARAAGAAAAA--------TALDGARVGDKRIRVSAARPSSASIRRCKLHVAGLPVRER 297
            NLIVNYLPH++  +RL E+FAP+G +AHAKVVRDRATGGS+GYGFVRFA     A            AL+GARVG K IRVS ARPSS +I+ CKLHVAG+P   R
Sbjct:    2 NLIVNYLPHSLGDRRLVEMFAPHGVIAHAKVVRDRATGGSMGYGFVRFAGPPPPAXXXXXXXXXXIAALNGARVGGKHIRVSLARPSSEAIQNCKLHVAGMPPASR 107
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BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: D7FVL9_ECTSI (Xel-1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL9_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 2.120e-19
Identity = 51/95 (53.68%), Postives = 65/95 (68.42%), Query Frame = 1 
Query:    1 NNLIVNYLPHAVSSKRLAELFAPYGAVAHAKVVRDRATGGSLGYGFVRFARAAGAAAAATALDGARVGDKRIRVSAARPSSASIRRCKLHVAGLP 285
            NNLI+NYLP  V+   L  +FA +G +AH KVV DR+TG S+GYGFV+F     AAAA  A++G  +  KRI+VS ARPSS  I+  KL+V  LP
Sbjct:  108 NNLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKVSIARPSSKDIKNSKLYVTNLP 202
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BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: UPI000FCD10D0 (ELAV-like protein 3 n=1 Tax=Neopelma chrysocephalum TaxID=114329 RepID=UPI000FCD10D0)

HSP 1 Score: 86.7 bits (213), Expect = 3.750e-19
Identity = 50/94 (53.19%), Postives = 63/94 (67.02%), Query Frame = 1 
Query:    4 NLIVNYLPHAVSSKRLAELFAPYGAVAHAKVVRDRATGGSLGYGFVRFARAAGAAAAATALDGARVGDKRIRVSAARPSSASIRRCKLHVAGLP 285
            NLIVNYLP ++S + L  LF   G +   K+VRD+ TG SLGYGFV +  A  A  A  AL+G ++  K I+VS ARPSSASIR   L+V+GLP
Sbjct:    8 NLIVNYLPQSMSQEELRSLFGSLGDIESCKLVRDKVTGQSLGYGFVNYVEAGDADRAIGALNGLKLQTKTIKVSYARPSSASIRDANLYVSGLP 101
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BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: A0A8C3CI78_CAIMO (ELAV like RNA binding protein 3 n=2 Tax=Anatidae TaxID=8830 RepID=A0A8C3CI78_CAIMO)

HSP 1 Score: 85.5 bits (210), Expect = 6.130e-19
Identity = 49/94 (52.13%), Postives = 62/94 (65.96%), Query Frame = 1 
Query:    4 NLIVNYLPHAVSSKRLAELFAPYGAVAHAKVVRDRATGGSLGYGFVRFARAAGAAAAATALDGARVGDKRIRVSAARPSSASIRRCKLHVAGLP 285
            NLIVNYLP ++S   L  LF   G +   K+VRD+ TG SLGYGFV +  A  A  A + L+G ++  K I+VS ARPSSASIR   L+V+GLP
Sbjct:    9 NLIVNYLPQSMSQDELRSLFGSLGDIESCKLVRDKVTGQSLGYGFVNYVEAGDADKAISTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLP 102
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BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: UPI0015A5860B (ELAV-like protein 3 n=1 Tax=Oxyura jamaicensis TaxID=8884 RepID=UPI0015A5860B)

HSP 1 Score: 85.5 bits (210), Expect = 2.230e-18
Identity = 49/94 (52.13%), Postives = 62/94 (65.96%), Query Frame = 1 
Query:    4 NLIVNYLPHAVSSKRLAELFAPYGAVAHAKVVRDRATGGSLGYGFVRFARAAGAAAAATALDGARVGDKRIRVSAARPSSASIRRCKLHVAGLP 285
            NLIVNYLP ++S   L  LF   G +   K+VRD+ TG SLGYGFV +  A  A  A + L+G ++  K I+VS ARPSSASIR   L+V+GLP
Sbjct:   82 NLIVNYLPQSMSQDELRSLFGSLGDIESCKLVRDKVTGQSLGYGFVNYVEAGDADKAISTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLP 175
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BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: UPI0008167984 (ELAV-like protein 4 n=1 Tax=Corvus brachyrhynchos TaxID=85066 RepID=UPI0008167984)

HSP 1 Score: 86.7 bits (213), Expect = 2.290e-18
Identity = 50/94 (53.19%), Postives = 63/94 (67.02%), Query Frame = 1 
Query:    4 NLIVNYLPHAVSSKRLAELFAPYGAVAHAKVVRDRATGGSLGYGFVRFARAAGAAAAATALDGARVGDKRIRVSAARPSSASIRRCKLHVAGLP 285
            NLIVNYLP ++S + L  LF   G +   K+VRD+ TG SLGYGFV +  A  A  A  AL+G ++  K I+VS ARPSSASIR   L+V+GLP
Sbjct:   63 NLIVNYLPQSMSQEELRSLFGSLGDIESCKLVRDKVTGQSLGYGFVNYVEAGDADRAIGALNGLKLQTKTIKVSYARPSSASIRDANLYVSGLP 156
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BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: A0A1I8NCM9_MUSDO (Uncharacterized protein n=1 Tax=Musca domestica TaxID=7370 RepID=A0A1I8NCM9_MUSDO)

HSP 1 Score: 84.3 bits (207), Expect = 3.870e-18
Identity = 46/94 (48.94%), Postives = 64/94 (68.09%), Query Frame = 1 
Query:    4 NLIVNYLPHAVSSKRLAELFAPYGAVAHAKVVRDRATGGSLGYGFVRFARAAGAAAAATALDGARVGDKRIRVSAARPSSASIRRCKLHVAGLP 285
            NLIVNYLP  +S + +  LF  +G V   K++RD+ TG SLGYGFV + +   A  A ++L+G R+ +K I+VS ARPSS SI+   L+V+GLP
Sbjct:   69 NLIVNYLPQTMSQEDIRALFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAISSLNGLRLQNKTIKVSIARPSSESIKGANLYVSGLP 162
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BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: A0A8K1FZK5_9PASS (Uncharacterized protein n=1 Tax=Zosterops borbonicus TaxID=364589 RepID=A0A8K1FZK5_9PASS)

HSP 1 Score: 87.8 bits (216), Expect = 4.960e-18
Identity = 51/94 (54.26%), Postives = 63/94 (67.02%), Query Frame = 1 
Query:    4 NLIVNYLPHAVSSKRLAELFAPYGAVAHAKVVRDRATGGSLGYGFVRFARAAGAAAAATALDGARVGDKRIRVSAARPSSASIRRCKLHVAGLP 285
            NLIVNYLP ++S + L  LF   G +   K+VRDR TG SLGYGFV +  A  A  A  AL+G ++  K I+VS ARPSSASIR   L+V+GLP
Sbjct:  457 NLIVNYLPQSMSQEELRSLFGSLGDIESCKLVRDRVTGQSLGYGFVNYVEAGDADRAIGALNGLKLQTKTIKVSYARPSSASIRDANLYVSGLP 550
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BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: A0A1I8H8Z0_9PLAT (Uncharacterized protein n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8H8Z0_9PLAT)

HSP 1 Score: 85.9 bits (211), Expect = 5.410e-18
Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 1 
Query:    4 NLIVNYLPHAVSSKRLAELFAPYGAVAHAKVVRDRATGGSLGYGFVRFARAAGAAAAATALDGARVGDKRIRVSAARPSSASIRRCKLHVAGLP 285
            NLI+NYLP  +S + +  LF   G V   K++RD+ATG SLGYGFV F +   AA A  +L+G R+ +K I+VS ARPSS SI+   L+++GLP
Sbjct:   66 NLIINYLPQNMSQEEIKALFGGIGEVESCKLIRDKATGQSLGYGFVNFVQPRDAARAVASLNGLRLHNKTIKVSLARPSSESIKGANLYISGLP 159
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BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: A0A835YN91_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN91_9STRA)

HSP 1 Score: 868 bits (2244), Expect = 0.000e+0
Identity = 470/470 (100.00%), Postives = 470/470 (100.00%), Query Frame = 1 
Query:    1 MVSEAAPXXXXXXXXXXXXXXXXXXXXXXXSSIRASIDDSASTYSLNVHELSFSTSELVINPEIFSDVAPSDFLEIYRPSARKDTRLVLQVDSVAPIKGGRLQISLLKSIAEAFGLQPWSDVVVRKVDPKAAAADFVEFTIKDQFIPRADILRFKRTVFGSPAFRGKAFNSVGVRASVRELTRHGQPAASGILTEKTNFIFRSRSSRIFWLVQISVEMYEYAPTGQLYLEIFISEFVTKLLQKWKAIQATHSLTIAFFTRTFFLNNVDPAACGEGIYHRAICFTADGRAYEDSYKIVLENEVCTDSEKLTMQLKREMMDFPRIMGWCRPTLMTHRTLAEPQNGVGAVNVGVPSYAAQGNFLEAINVTLNVLEKHYMDRDLSRSGNSIVALSASTGVFEVDARLAGITKQRMMDNGIGMDMVSLSQPPLHTAPLFIYMGGTLDEEADRRSVEAALNAEAVYEVPHWMNLSF 1410
            MVSEAAPXXXXXXXXXXXXXXXXXXXXXXXSSIRASIDDSASTYSLNVHELSFSTSELVINPEIFSDVAPSDFLEIYRPSARKDTRLVLQVDSVAPIKGGRLQISLLKSIAEAFGLQPWSDVVVRKVDPKAAAADFVEFTIKDQFIPRADILRFKRTVFGSPAFRGKAFNSVGVRASVRELTRHGQPAASGILTEKTNFIFRSRSSRIFWLVQISVEMYEYAPTGQLYLEIFISEFVTKLLQKWKAIQATHSLTIAFFTRTFFLNNVDPAACGEGIYHRAICFTADGRAYEDSYKIVLENEVCTDSEKLTMQLKREMMDFPRIMGWCRPTLMTHRTLAEPQNGVGAVNVGVPSYAAQGNFLEAINVTLNVLEKHYMDRDLSRSGNSIVALSASTGVFEVDARLAGITKQRMMDNGIGMDMVSLSQPPLHTAPLFIYMGGTLDEEADRRSVEAALNAEAVYEVPHWMNLSF
Sbjct:    1 MVSEAAPXXXXXXXXXXXXXXXXXXXXXXXSSIRASIDDSASTYSLNVHELSFSTSELVINPEIFSDVAPSDFLEIYRPSARKDTRLVLQVDSVAPIKGGRLQISLLKSIAEAFGLQPWSDVVVRKVDPKAAAADFVEFTIKDQFIPRADILRFKRTVFGSPAFRGKAFNSVGVRASVRELTRHGQPAASGILTEKTNFIFRSRSSRIFWLVQISVEMYEYAPTGQLYLEIFISEFVTKLLQKWKAIQATHSLTIAFFTRTFFLNNVDPAACGEGIYHRAICFTADGRAYEDSYKIVLENEVCTDSEKLTMQLKREMMDFPRIMGWCRPTLMTHRTLAEPQNGVGAVNVGVPSYAAQGNFLEAINVTLNVLEKHYMDRDLSRSGNSIVALSASTGVFEVDARLAGITKQRMMDNGIGMDMVSLSQPPLHTAPLFIYMGGTLDEEADRRSVEAALNAEAVYEVPHWMNLSF 470
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BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: A0A024TVH2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TVH2_9STRA)

HSP 1 Score: 323 bits (827), Expect = 1.620e-95
Identity = 192/468 (41.03%), Postives = 265/468 (56.62%), Query Frame = 1 
Query:   91 SSIRASIDDSASTYSLNVHELSFSTSE-LVINPEIFSDVAPSDFLEIYRPSARKDTRLVLQVDSVAPIKGGRLQISLLKSIAEAFGLQPWSDVVVRKVDPKAAAADFVEFTIKDQFIPRADILRFKRTVFGSPAFRGKAFNSVGVRASVRELTRHGQPAASGILTEKTNFIFRSRSSRIFWLVQISVEMYEYAPTGQLYLEIFISEFVTKLLQKWKAIQATHSLTIAFFTRTF-----FLNNVDPAA--CGEGIYHRAI-----------------CFTADGRAYEDSYKIVLENEVCTDSEKLTMQLKREMMDFPRIMGWCRPTLMTHRTLAEPQNGVG---AVNVGVPSYAAQGNFLEAINVTLNVLEKHYMDRDLSRSGNSIVALSASTGVFEVDARLAGITKQRMMDNGIGMDMVSLSQPPLHTAPLFIYMGGTLDEEADRRSVEAALNAEAVYEVPHWMNLSF 1410
            S+ R S     + Y L VH   +   E L++NPE F D+   D +EI +P  R   RLV+QV ++API+G +LQ+S+LK +A  F L P+ +V V+++DP  A  DF+E + KDQF+ RAD+ R+K  +FG   F GKA+ ++  RA V  L   G+    G++   T  I RSRSSRIFWLVQ+S EM+++A  G++Y E  +  FV  L+ KW     +HS+T+  F+R+F     F  + DP A    +   H+A                    +  GR YED YK+++++    D   L   L+ E   +P    W  P      +      GV    A+  GVP+ AA+GN LEAINVTLNVL+KHYMDRDL+R+G  IV L+A   VF V  RLA ITKQRMMD G+GMDMVSL+ PPLH  PLF +    L +       + +L     Y VPHW+N+SF
Sbjct:   10 SATRTSSRRQNAAYKLMVHGPEYGNGEELIVNPESFPDLKVRDIVEIIQPD-RVHLRLVMQVRTLAPIRG-KLQVSILKDLALQFQLDPFHEVTVQRIDPTDATVDFIELSFKDQFMSRADLWRYKVAMFGKCLFAGKAYEALDTRAQVEMLLAKGENVLCGVMGTSTKLILRSRSSRIFWLVQMSPEMWDFADDGEIYFEKLLHRFVRALVAKWHEASVSHSVTVLVFSRSFYDADQFPPDYDPTAPVFADECSHQAFGPGAQASAAHGHGPAMHVDSCSGRYYEDFYKVLIQDYTGPDWTVLIRLLQAEFASYPERHRWRVPASKRPASYVVSPTGVVQWLALPHGVPARAAEGNVLEAINVTLNVLDKHYMDRDLNRAGQGIVMLTAGAAVFHVPKRLAQITKQRMMDTGVGMDMVSLTTPPLHPVPLFRWSNPPLSKG------DNSLPTPTEYSVPHWINVSF 469
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BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: A0A2D4BMQ1_PYTIN (DEPDC5_CTD domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMQ1_PYTIN)

HSP 1 Score: 318 bits (815), Expect = 2.580e-93
Identity = 200/466 (42.92%), Postives = 267/466 (57.30%), Query Frame = 1 
Query:  124 STYSLNVHELSFSTSELVINPEIFSDVAPSDFLEIYRPSARKDTRLVLQVDSVAPIKGGRLQISLLKSIAEAFGLQPWSDVVV-RKVDPKAAAADFVEFTIKDQFIPRADILRFKRTVFGSPAFRGKAFNSVGVRASVRELTRHGQPAASGILTEKTNFIFRSRSSRIFWLVQISVEMYEYAPTGQLYLEIFISEFVTKLLQKWKAIQATHSLTIAFFTRTF-----FLNNVDPAA-------------------CGEGIYHRAICFTADGRAYEDSYKIVLENEVCTDSEKLTMQLKREMMDFPRIMGW-------------CRPTLMTHRTL-------AEPQNGVGAVNV--------GVPSYAAQGNFLEAINVTLNVLEKHYMDRDLSRSGNSIVALSASTGVFEVDARLAGITKQRMMDNGIGMDMVSLSQPPLHTAPLFI--YMGGTLDEEADRRSVEA 1356
            S +SL VH   F  SELVINP+ F DV  +D LEI +P  R+  RLVLQV S+AP+KG +LQIS+LK IA  FGL  + +VVV ++VDP+    DF+E + KDQF+ RADI RFK  + G      K   ++G+RA V  L  + Q    G++   T  I RSRS R+FWLVQ+S EM+E+AP G+LY E  ++  +  L+ KW     THS+TI  F+R+F     F ++ DP +                   C  G           G+ YED YK+++ N    D  +L + LKRE M++     W             CR    T  T        +E Q+   A +         GVPS AA GN LEAINVTLN+L+KHYMDRDL+R+G SIV L+A + VF+VD RLA ITKQRMMDNG+GMDM+SL+ PPLH APLFI  +     +E+   R++++
Sbjct:   19 SVFSLMVHGPEFG-SELVINPDCFPDVKVNDLLEIVQPE-REHQRLVLQVTSLAPVKG-KLQISVLKXIAAQFGLDVFYNVVVVQRVDPRDVTLDFLELSFKDQFLSRADIWRFKVAMLGXCVHVSKNVETLGIRAQVEGLFANQQDVLCGVVGPNTKIIVRSRSGRLFWLVQMSTEMWEFAPDGELYYEKLLNRLLRVLVSKWSENSVTHSVTIIAFSRSFYDKEQFPDDYDPKSTLFSSPSRQGFGPGCTANRCANGYGPTIHVDPLTGQYYEDFYKVLVMNYTGPDWSELLLILKREFMNYHETHRWRLPSEPIPCEYEVCRDAEATSSTSTVSPLTPSETQSSTQASSYVKWKVLPFGVPSRAADGNVLEAINVTLNILDKHYMDRDLNRTGQSIVMLTAGSSVFKVDERLAEITKQRMMDNGVGMDMISLATPPLHVAPLFICRHRSSFENEDVGTRTIDS 481
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BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: A0A3F2RED5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RED5_9STRA)

HSP 1 Score: 298 bits (764), Expect = 1.430e-92
Identity = 178/453 (39.29%), Postives = 249/453 (54.97%), Query Frame = 1 
Query:  133 SLNVHELSFSTSEL-VINPEIFSDVAPSDFLEIYRPSARKDTRLVLQVDSVAPIKGGRLQISLLKSIAEAFGLQPWSDVVVRKVDPKAAAADFVEFTIKDQFIPRADILRFKRTVFGSPAFRGKAFNSVGVRASVRELTRHGQPAASGILTEKTNFIFRSRSSRIFWLVQISVEMYEYAPTGQLYLEIFISEFVTKLLQKWKAIQATHSLTIAFFTRTFFLNNVDPAA-------------------CGEGIYHRAICF-------TADGRAYEDSYKIVLENEVCTDSEKLTMQLKREMMDFPRIMGWCRPTLMTHR------------TLAEPQNGVGAVNV----------------------GVPSYAAQGNFLEAINVTLNVLEKHYMDRDLSRSGNSIVALSASTGVFEVDARLAGITKQRMMDNGIGMDMVSLSQPPLHTAPLFIY 1308
            SL VH   F   EL V+NP+IF ++   D +EI +P  R   RLVL V+S+AP++G +LQ+S+ K IA  FGL+ +  V VR+V+    + DFVE + KDQF+ RADI RFK T+ G   + GK    +G+R+ V  +  +      G++ + T  + RSRSSR+FWLVQ+S EM+E+AP G++Y E  ++  +  L++KW     +HS+T+  F+R+F+  N  P                     CG    + A  +          GR YED YK+V+ N    D  +L + LK+E   +  +  W  P  ++              T   P++  G                          GVPS A  GN LEAINVTLNVL+KHYMDRDLSR+G SIV ++A   +F V+ +LA IT+QRMMDNG+GMDM+SLS PPLH  PLFIY
Sbjct:   15 SLVVHGPEFRNGELLVLNPDIFPEIQLHDLVEISQPE-RIHPRLVLSVESLAPVRG-KLQVSVAKDIAAQFGLEGFRSVTVRRVNQSDVSVDFVELSFKDQFLSRADIWRFKVTMLGQCVYVGKTVECLGIRSQVDAILANHTQVECGVIGDATKIVVRSRSSRLFWLVQMSTEMWEFAPDGEIYYEKLLNRLLRILIEKWSESSVSHSVTVIAFSRSFYDANQFPEGFDPRQAPFSDPRRQGFGPGCGAPGINMANGYGPTIHVDPVTGRYYEDFYKVVVMNFTGPDWSRLLLLLKKEFASYYEMHRWRTPEQISSAQYEILQCPKAVDTKMHPEDANGIAKTRQPTHDACEFADTYVKWTKLPFGVPSRAKDGNILEAINVTLNVLDKHYMDRDLSRTGQSIVMMTAGCSIFNVNKKLAEITEQRMMDNGVGMDMISLSTPPLHVVPLFIY 465
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BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: W4GMI4_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GMI4_9STRA)

HSP 1 Score: 314 bits (805), Expect = 1.960e-92
Identity = 189/469 (40.30%), Postives = 262/469 (55.86%), Query Frame = 1 
Query:   91 SSIRASIDDSASTYSLNVHELSFSTSE-LVINPEIFSDVAPSDFLEIYRPSARKDTRLVLQVDSVAPIKGGRLQISLLKSIAEAFGLQPWSDVVVRKVDPKAAAADFVEFTIKDQFIPRADILRFKRTVFGSPAFRGKAFNSVGVRASVRELTRHGQPAASGILTEKTNFIFRSRSSRIFWLVQISVEMYEYAPTGQLYLEIFISEFVTKLLQKWKAIQATHSLTIAFFTRTF-----FLNNVDP-------------------AACGEGIYHRAICFTADGRAYEDSYKIVLENEVCTDSEKLTMQLKREMMDFPRIMGWCRPTLMTHRTLAEPQNGVG----AVNVGVPSYAAQGNFLEAINVTLNVLEKHYMDRDLSRSGNSIVALSASTGVFEVDARLAGITKQRMMDNGIGMDMVSLSQPPLHTAPLFIYMGGTLDEEADRRSVEAALNAEAVYEVPHWMNLSF 1410
            S+ R SI    + Y L  H   +   E LV+NPE F D+   D +EI +P  R   RL++QV ++AP++G +LQ+S+LK +A  F L P+ +V V++++P  A  DF+E + KDQF+ RAD+ R+K  +FG   F GK + ++G RA V  L         G++   T  I RSRSSRIFWLV +S EM+++A  G++Y E  I  FV  L+ KW+     HS+T+  F+R+F     F  + DP                   AA G    H     +  GR YED YK+++ +    D   L   L+ E   +     W  PT     T A   +  G    A+  GVP+ A++GN LEAINVTLN+L+KHYMDRDL+R+G  IV L+A + VF+V  RLA ITKQRMMD G+GMDMVS+S PPLH  PLF            R S  A  +A   + VPHW+++SF
Sbjct:   11 SAHRMSIKRQNAAYKLMFHGPEYGNGEELVVNPESFPDLKLHDIVEIVQPD-RTHLRLIMQVRTLAPVRG-KLQVSILKDLALQFQLDPFHEVTVQRIEPSDATVDFIELSFKDQFMSRADLWRYKVAMFGKCLFAGKVYETLGTRAQVEMLLAKDDNVLCGVMGTDTKLILRSRSSRIFWLVHMSPEMWDFADDGEMYFEKLIHRFVRSLVAKWQEASVGHSVTVLMFSRSFYDKTQFPCDYDPTSALFADEYAVGSDHLPSAAALGSPAIH---VDSRSGRFYEDFYKVLIRDYTGPDWSLLVRLLQAEFASYAERHRWRLPTDSRPATYAVSTSSGGVQWLALPHGVPARASEGNVLEAINVTLNLLDKHYMDRDLNRAGQGIVMLTAGSAVFQVSKRLAQITKQRMMDTGVGMDMVSVSMPPLHPVPLF------------RWSHAAKTDAPTEFSVPHWISVSF 462
[Close]
BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: A0A485LE27_9STRA (Aste57867_20038 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LE27_9STRA)

HSP 1 Score: 312 bits (799), Expect = 5.530e-92
Identity = 184/452 (40.71%), Postives = 262/452 (57.96%), Query Frame = 1 
Query:  136 LNVHELSFSTSE-LVINPEIFSDVAPSDFLEIYRPSARKDTRLVLQVDSVAPIKGGRLQISLLKSIAEAFGLQPWSDVVVRKVDPKAAAADFVEFTIKDQFIPRADILRFKRTVFGSPAFRGKAFNSVGVRASVRELTRHGQPAASGILTEKTNFIFRSRSSRIFWLVQISVEMYEYAPTGQLYLEIFISEFVTKLLQKWKAIQATHSLTIAFFTRTF-----FLNNVDPAA------CGE--------GIYHR----AICFTADGRAYEDSYKIVLENEVCTDSEKLTMQLKREMMDFPRIMGWCRPTLMTHRTLAEPQNGV---GAVNVGVPSYAAQGNFLEAINVTLNVLEKHYMDRDLSRSGNSIVALSASTGVFEVDARLAGITKQRMMDNGIGMDMVSLSQPPLHTAPLFIYMGGTLDEEADRRSVEAALNAEAVYEVPHWMNLSF 1410
            L VH   + T E LV+NPE F D+   D +EI +P  R   RL++QV S+AP++G +LQIS+LK +A  F L+P+ +V V++++P+ A  DF+E + KDQF+ RADI R+K  +FG   F GK + ++G RA V  L    +    G++   T  I RSRSSRIFW++Q+S EM+++A  G++Y E  +   V  L+ KW     +HS+T+  F+R++     F ++ DP A      C          G Y      A+   A  R YED YK+++++    D   L   LK E   + +   W  P            +GV     +  GVP+ A++GN LEAINVTLNVLEKHYMDRDL+R+G  IV ++A + VF+V  RLA ITKQRMMD G+GMDM+SL+ PPLH  PLFI+      ++AD             Y VPHW+++SF
Sbjct:   25 LMVHGPEYGTGEELVVNPESFPDLKLRDIVEITQPD-RSHLRLIMQVRSLAPVRG-KLQISILKDLALQFQLEPFHEVTVQRIEPEEATVDFIELSFKDQFMSRADIWRYKVAMFGKCLFVGKVYETLGTRAQVEMLLAKHENVLCGVMGTDTKLILRSRSSRIFWIIQMSTEMWDFADDGEMYFEKLVQRLVRSLVAKWHEASVSHSVTVLVFSRSYYDRAQFPSDYDPTADVFADECNRQAFGPGATGAYAPGHGPAMHVDAHDRLYEDFYKVLIQDYTGPDWSLLLRLLKEEFATYAQRHRWRLPQDPHTARYTVSSDGVVWWHELPKGVPARASEGNVLEAINVTLNVLEKHYMDRDLNRAGQGIVMMTAGSAVFKVPKRLAQITKQRMMDTGVGMDMISLTTPPLHPVPLFIWSHPA--QQADE------------YNVPHWISVSF 460
[Close]
BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: A0A2P4Y5I6_9STRA (Vacuolar membrane-associated protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y5I6_9STRA)

HSP 1 Score: 296 bits (757), Expect = 1.230e-91
Identity = 179/455 (39.34%), Postives = 248/455 (54.51%), Query Frame = 1 
Query:  133 SLNVHELSFSTSEL-VINPEIFSDVAPSDFLEIYRPSARKDTRLVLQVDSVAPIKGGRLQISLLKSIAEAFGLQPWSDVVVRKVDPKAAAADFVEFTIKDQFIPRADILRFKRTVFGSPAFRGKAFNSVGVRASVRELTRHGQPAASGILTEKTNFIFRSRSSRIFWLVQISVEMYEYAPTGQLYLEIFISEFVTKLLQKWKAIQATHSLTIAFFTRTF-----FLNNVDPA--------------ACGEGIYHRAICF-------TADGRAYEDSYKIVLENEVCTDSEKLTMQLKREMMDFPRIMGW-------------CRPTLMTHRTLAEPQNGV-GAVN----------------------VGVPSYAAQGNFLEAINVTLNVLEKHYMDRDLSRSGNSIVALSASTGVFEVDARLAGITKQRMMDNGIGMDMVSLSQPPLHTAPLFIY 1308
            SL VH   F   EL V+NP++F +V   D +EI + + R   RLVL V+S+AP++G +LQ+S+ K +A  FGL+ +  V VR+V+P+  + DFVE + KDQF+ RAD+ RFK T+ G   + G+    +G+R+ V  +         G++ E T  + RSRSSR+FWLVQ+S EM+E+AP G++Y E  ++  +  L+ KW     THS+TI  F+R+F     F +  DP                CG    + A  +          G  YED YK+V+ N    D  +L + LK E   +     W             CR   +   T  +  N + GA                         GVPS A  GN LEAINVTLNVL+KHYMDRDLSR+G  IV ++A   +F V+++LA IT+QRMMDNG+GMDM+SLS PPLH  PLFIY
Sbjct:   15 SLVVHGPEFRNGELLVLNPDLFPEVKLHDLVEIAQ-TERVHPRLVLAVESLAPVRG-KLQVSVAKDVAAQFGLEAFRSVTVRRVEPRDVSVDFVELSFKDQFLSRADVWRFKVTMLGQCVYVGRTVECLGIRSQVDAVLASNTHLHCGVIGESTKIVVRSRSSRLFWLVQMSTEMWEFAPDGEIYYEKLLNRLLRVLITKWSESSVTHSITIIAFSRSFYDANQFPDGFDPTKAPFSDPKRQGFGPGCGAPDINMANGYGPTIHVDPVSGLYYEDFYKVVVMNYTGPDWSRLLLLLKEEFASYYETHRWRTPEEISTAQYEICRCPKLASNTDEKENNSIPGAAKDNPDNPEDCMCDDLYVKWTKLPSGVPSRAKDGNILEAINVTLNVLDKHYMDRDLSRTGQGIVMMTAGCSIFNVNSKLAEITEQRMMDNGVGMDMISLSTPPLHVVPLFIY 467
[Close]
BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: A0A1E7FH64_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FH64_9STRA)

HSP 1 Score: 289 bits (740), Expect = 1.090e-90
Identity = 173/388 (44.59%), Postives = 232/388 (59.79%), Query Frame = 1 
Query:  301 RLQISLLKSIAEAFGLQPWSDVVVRKVDP-------KAAAADFVEFTIKDQFIPRADILRFKRTVFGSPAFRGKAFNSV--GVRASVRELTRHGQ-PAASGILTEKTNFIFRSRSSRIFWLVQISVEMYEYA-PTGQLY-----LEIFISE---FVTKLLQKWKAIQATHSLTIAFFTRTFFLNNVDPAACGEGIYHRAICFTADGRAYEDSYKIVLENEVCTDSEKLTMQLKREMMDFPRIMGWCRPTLMTHRTLAEPQNGVGAVNVGVPSYAAQGNFLEAINVTLNVLEKHYMDRDLSRSGNSIVALSASTGVFEVDARLAGITKQRMMDNGIGMDMVSLSQPPLHTAPLFIYMGGTLDE-EADRRSVEAALNAEAVYEVPHWMNL 1404
            R QIS+L+S+AE + L  +  V V K++P       KA +ADFV  TIKDQF+ R D+L F+  + GS  + G+       G++A  RE+ RHG   A SGI+T+KT   FRSRS+RI WLVQ+S EM++Y+ P  + Y      EI+  +   F+ KL  KWK ++ THSLT+ FF+RTF  N +      E +Y         GR +ED YK V+ENE CTD + L +++K E + +P  +GW     +T R                PS A+QGN LEAINV LN+++ HY+DRDL R+G SIV +S   GVFEVD  LAGIT QRMMDNGIG DM+SL  PPLH AP F+Y    L     +++ ++     E  YEVPHWM+L
Sbjct:   13 RTQISVLRSVAELYNLSTYDLVTVHKIEPQDEEEVLKAVSADFVVVTIKDQFVSRGDMLLFQTKLIGSWIYEGQRLTETTRGIKAHAREI-RHGNFSAKSGIVTDKTMITFRSRSARIIWLVQLSSEMWDYSSPYERQYEPESVCEIYFDQWIRFLYKLFTKWKELEVTHSLTVIFFSRTFLSNGLKSNLDSEDVY---------GRRFEDHYKPVIENETCTDWDSLIVRIKEEFIKYPLEVGWN----LTDRK---------------PSCASQGNLLEAINVVLNLMQYHYLDRDLHRTGQSIVIVSPGCGVFEVDKGLAGITYQRMMDNGIGSDMLSLGLPPLHIAPFFLYNVSALYYLSLEKQGIDTN---ETYYEVPHWMHL 368
[Close]
BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: A0A6G0XLB7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XLB7_9STRA)

HSP 1 Score: 308 bits (789), Expect = 1.560e-90
Identity = 188/463 (40.60%), Postives = 261/463 (56.37%), Query Frame = 1 
Query:  124 STYSLNVHELSFSTSE-LVINPEIFSDV-----APSDFLEIYRPSARKDTRLVLQVDSVAPIKGGRLQISLLKSIAEAFGLQPWSDVVVRKVDPKAAAADFVEFTIKDQFIPRADILRFKRTVFGSPAFRGKAFNSVGVRASVRELTRHGQPAASGILTEKTNFIFRSRSSRIFWLVQISVEMYEYAPTGQLYLEIFISEFVTKLLQKWKAIQATHSLTIAFFTRTF-----FLNNVDPAA------C-----GEGIYHR---------AICFTADGRAYEDSYKIVLENEVCTDSEKLTMQLKREMMDFPRIMGWCRPTLMTHRTLAEPQNGV---GAVNVGVPSYAAQGNFLEAINVTLNVLEKHYMDRDLSRSGNSIVALSASTGVFEVDARLAGITKQRMMDNGIGMDMVSLSQPPLHTAPLFIYMGGTLDEEADRRSVEAALNAEAVYEVPHWMNLSF 1410
            S Y L VH   + T E LV+NPE F D+     A  D +EI +P  R   RLV+QV S+AP++G + QIS+LK +A  F L+ + DV V+K++   A  DF+E + KDQF+ RADI R+K  +FG   F GK + ++G RA V  L    Q    G++  +T  I RSRSSRIFWLVQ+S EM+++A  G++Y E  +   V  L+ KW+    +HS+T+  F+R++     F  + DP A      C     G G  +          A+      R YED YK+++++    D   L   LK E   +     W  P  +   +     +GV     +  GVP+ A++GNFLEAINVTLNVL+KHYMDRDL+R+G  IV ++A + VF V  RLA ITKQRMMD G+GMDM+SL+ PPLH  PLFI+      +  D             Y VPHW+++SF
Sbjct:   32 SAYKLMVHGPEYGTGEELVVNPESFPDLKVVTMALHDIVEITQPD-RTHLRLVMQVRSLAPVRG-KFQISILKDLAVQFQLEAFHDVTVQKIESSDATVDFIELSFKDQFMSRADIWRYKVALFGKCLFVGKVYETLGTRAQVEMLLAKDQNVLCGVMGTETKLILRSRSSRIFWLVQMSPEMWDFADDGEMYFEKLVERLVRVLVAKWQEASVSHSVTVLVFSRSYYDKKQFPLDYDPTADTFAEECSRQAFGPGATNNPNVAFGHGPAMHLDGHDRYYEDFYKVLIQDYTGPDWSHLVRLLKEEFASYAEKHRWRLPEDLAPASYTVLPSGVVQWEELPRGVPARASEGNFLEAINVTLNVLDKHYMDRDLNRAGQGIVMITAGSAVFNVPKRLAQITKQRMMDTGVGMDMISLTTPPLHPVPLFIWKQPPEQQGDDE------------YNVPHWISVSF 480
[Close]
BLAST of jgi.p|Trimin1|169009 vs. uniprot
Match: A0A1V9YA92_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YA92_9STRA)

HSP 1 Score: 308 bits (788), Expect = 4.740e-90
Identity = 192/501 (38.32%), Postives = 269/501 (53.69%), Query Frame = 1 
Query:   91 SSIRASIDDSASTYSLNVHELSFSTSE-LVINPEIFSDVAPSDFLEIYRPSARKDTRLVLQVDSVAPIKGGRLQISLLKSIAEAFGLQPWSDVVVRKVDPKAAAADFVEFTIKDQFIPRADILRFKRTVFGSPAFRGKAFNSVGVRASVRELTRHGQPAASGILTEKTNFIFRSRSSRIFWLVQISVEMYEYAPTGQLYLEIFISEFVTKLLQKWKAIQATHSLTIAFFTRTF-----FLNNVDPAAC-----------GEGI--------YHRAICFTADGRAYEDSYKIVLENEVCTDSEKLTMQLKREMMDFPRIMGWCRPTLMTH-----RTLAEPQNGVGAVNV-------GVPSYAAQGNFLEAINVTLNVLEKHYMDRDLSRSGNSIVALSASTGVFEVDARLAGITKQRMMDNGIGMDMVSLSQPPLHTAPLFIYMGGTLDEEADRRSVEAALNAE------------------------AVYEVPHWMNLSF 1410
            SS RAS     ++Y L VH   + T E LVINPE F D    D  EI +P  R+  RLV+Q+ S+API+G + QIS+LK IA  F L  + +VVV+K++P  A  DF+E + KDQF+ RADI R+K  + G   + GK + ++G RA    L  + +    G++ + T  I RS+SSRIFWLV +S EM+++   G++Y E  ++  V  L+ KW+    +HS+TI  F+R++     F  + DPAA            G G         +  +I    DGR YED YK+++++    D   L   LKRE   + +   W  P          R   +P   V +  V       GVP+ A  GN LEAINVTLN+ +KHYMDRDL R+G  IV ++A   V++V  RLA ITKQRMMD G+GMDM+SL++PP+H  PLFI+      +EA   +      AE                        + Y VPHW+N+SF
Sbjct:    8 SSARASSKRLQASYKLTVHGPEYGTGEELVINPEAFPDAKVHDLWEISQPE-REHPRLVMQIRSLAPIRG-KFQISILKDIAAQFQLDTYHEVVVQKIEPTDATVDFIELSFKDQFMSRADIWRYKVAMIGRCMYAGKIYETLGTRAQAEMLLANEKSVLCGVMAKHTKLILRSKSSRIFWLVHMSREMWDFDDDGEMYFEKLVNRLVRGLVAKWQETSVSHSVTILMFSRSYYDKEQFPADFDPAATAFANECQSQGFGPGCAAAHVASGHGPSINVDCDGRYYEDFYKVIVQDYTGPDWSHLFKALKREFATYAQQHRWRLPQDSQRAKYEVRRFEDPVTNVTSFGVQWTVLPHGVPARAIDGNMLEAINVTLNIFDKHYMDRDLYRAGQGIVMITAGCSVYKVRQRLAQITKQRMMDTGVGMDMISLTKPPMHPVPLFIWQKQPKTKEAAVTNSPLFCVAEDMSIPLAPLSPSMASPTFPPQAEKSTYNVPHWINVSF 506
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169009 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CBL9_9STRA6.380e-63100.00RNA-binding domain of Hu antigen C n=1 Tax=Tribone... [more]
A0A835ZHQ1_9STRA4.590e-3262.26Hud and Au-rich element of the tumor necrosis fact... [more]
D7FVL9_ECTSI2.120e-1953.68Xel-1 protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
UPI000FCD10D03.750e-1953.19ELAV-like protein 3 n=1 Tax=Neopelma chrysocephalu... [more]
A0A8C3CI78_CAIMO6.130e-1952.13ELAV like RNA binding protein 3 n=2 Tax=Anatidae T... [more]
UPI0015A5860B2.230e-1852.13ELAV-like protein 3 n=1 Tax=Oxyura jamaicensis Tax... [more]
UPI00081679842.290e-1853.19ELAV-like protein 4 n=1 Tax=Corvus brachyrhynchos ... [more]
A0A1I8NCM9_MUSDO3.870e-1848.94Uncharacterized protein n=1 Tax=Musca domestica Ta... [more]
A0A8K1FZK5_9PASS4.960e-1854.26Uncharacterized protein n=1 Tax=Zosterops borbonic... [more]
A0A1I8H8Z0_9PLAT5.410e-1850.00Uncharacterized protein n=2 Tax=Macrostomum lignan... [more]

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BLAST of jgi.p|Trimin1|169009 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YN91_9STRA0.000e+0100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A024TVH2_9STRA1.620e-9541.03Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A2D4BMQ1_PYTIN2.580e-9342.92DEPDC5_CTD domain-containing protein n=1 Tax=Pythi... [more]
A0A3F2RED5_9STRA1.430e-9239.29Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
W4GMI4_9STRA1.960e-9240.30Uncharacterized protein n=9 Tax=Aphanomyces astaci... [more]
A0A485LE27_9STRA5.530e-9240.71Aste57867_20038 protein n=1 Tax=Aphanomyces stella... [more]
A0A2P4Y5I6_9STRA1.230e-9139.34Vacuolar membrane-associated protein (Fragment) n=... [more]
A0A1E7FH64_9STRA1.090e-9044.59Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
A0A6G0XLB7_9STRA1.560e-9040.60Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
A0A1V9YA92_9STRA4.740e-9038.32Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_61contigContig_61:364088..364402 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|169009|e_gw1.61.192.1
BRITEko00000,ko03019,ko03041
KEGG koko:K13208
DescriptionRNA binding
COG categoryDU
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0145@1|root,KOG0145@2759|Eukaryota
Evalue3.47e-20
Seed ortholog2880.D7FVL9
Hectar predicted targeting categoryother localisation
TranscriptId169331
TrackFilteredModels1
ProteinId169009
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169009gene_8694Tribonema minus UTEX_B_3156 geneContig_61 364088..364402 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8694_1exon_8694_1Tribonema minus UTEX_B_3156 exonContig_61 364088..364402 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8694CDS_8694Tribonema minus UTEX_B_3156 CDSContig_61 364088..364402 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169009Trimin1|169009|e_gw1.61.192.1Tribonema minus UTEX_B_3156 polypeptideContig_61 364088..364402 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8694 ID=mRNA_8694|Name=jgi.p|Trimin1|169009|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=315bp|location=Sequence derived from alignment at Contig_61:364088..364402+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AACAACCTCATCGTCAACTACCTGCCGCACGCCGTGAGCAGCAAGCGCCT
CGCGGAGCTCTTTGCGCCGTACGGCGCCGTCGCGCACGCCAAGGTCGTCA
GAGACAGGGCCACGGGCGGCAGCCTCGGCTACGGCTTCGTGCGCTTCGCG
CGCGCGGCGGGCGCGGCGGCGGCGGCGACAGCGCTCGACGGCGCGCGCGT
CGGCGACAAGCGCATCCGCGTGAGCGCCGCGCGCCCGAGTAGCGCGTCTA
TCCGGCGCTGCAAGCTGCACGTCGCGGGGCTGCCGGTGCGTGAGCGCTTA
TGTTTTTCCATATAA
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protein sequence of jgi.p|Trimin1|169009

>Trimin1|169009|e_gw1.61.192.1 ID=Trimin1|169009|e_gw1.61.192.1|Name=jgi.p|Trimin1|169009|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=105bp
NNLIVNYLPHAVSSKRLAELFAPYGAVAHAKVVRDRATGGSLGYGFVRFA
RAAGAAAAATALDGARVGDKRIRVSAARPSSASIRRCKLHVAGLPVRERL
CFSI*
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mRNA from alignment at Contig_61:364088..364402+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8694 ID=mRNA_8694|Name=jgi.p|Trimin1|169009|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=315bp|location=Sequence derived from alignment at Contig_61:364088..364402+ (Tribonema minus UTEX_B_3156 )
AACAACCTCATCGTCAACTACCTGCCGCACGCCGTGAGCAGCAAGCGCCT
CGCGGAGCTCTTTGCGCCGTACGGCGCCGTCGCGCACGCCAAGGTCGTCA
GAGACAGGGCCACGGGCGGCAGCCTCGGCTACGGCTTCGTGCGCTTCGCG
CGCGCGGCGGGCGCGGCGGCGGCGGCGACAGCGCTCGACGGCGCGCGCGT
CGGCGACAAGCGCATCCGCGTGAGCGCCGCGCGCCCGAGTAGCGCGTCTA
TCCGGCGCTGCAAGCTGCACGTCGCGGGGCTGCCGGTGCGTGAGCGCTTA
TGTTTTTCCATATAA
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Coding sequence (CDS) from alignment at Contig_61:364088..364402+

>mRNA_8694 ID=mRNA_8694|Name=jgi.p|Trimin1|169009|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=315bp|location=Sequence derived from alignment at Contig_61:364088..364402+ (Tribonema minus UTEX_B_3156 )
AACAACCTCATCGTCAACTACCTGCCGCACGCCGTGAGCAGCAAGCGCCT
CGCGGAGCTCTTTGCGCCGTACGGCGCCGTCGCGCACGCCAAGGTCGTCA
GAGACAGGGCCACGGGCGGCAGCCTCGGCTACGGCTTCGTGCGCTTCGCG
CGCGCGGCGGGCGCGGCGGCGGCGGCGACAGCGCTCGACGGCGCGCGCGT
CGGCGACAAGCGCATCCGCGTGAGCGCCGCGCGCCCGAGTAGCGCGTCTA
TCCGGCGCTGCAAGCTGCACGTCGCGGGGCTGCCGGTGCGTGAGCGCTTA
TGTTTTTCCATATAA
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