mRNA_6850 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|350326 vs. uniprot
Match: A0A836CAD9_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAD9_9STRA) HSP 1 Score: 2188 bits (5669), Expect = 0.000e+0 Identity = 1347/1347 (100.00%), Postives = 1347/1347 (100.00%), Query Frame = 1
Query: 1 MEAMELEQDFEYVPPPPLAAPATHLKVAKLADLDVPELPAPVSRFKPELKVATLSDIGNTTKLQVRREFKVEQLKPLDKFSARASPAPLPRSSSNGSTAAVAAKPPKLKKRRKGTGWRLDDSSDSDGDAASPPLAVARPTLSEINGGSRNSQTRSVSSRDAPCSRPSCSPTRSQSQGHRPAPXXXXXXXXXXXXXXXXXXXGLWNSASDXXXXXXXXPPVITEAARARAFGTAAAAASPAHSATDVDNETDAPARAPSPPVRVASAFGERDTSERCLPQKRAAGAADRGXXXXXXXXXXXXXXGKARRARSGDAEEEHGSEHWGADGYEGXXXXXXXXAPPPVELHPEFENPHFLDDVVEPLELAGGATVPAAANRYLKSFQRETVQWLYERYHRQHGAIAALDMGLGKTVITVCFIAAILGKTGTRADRVALDARERAVRRAEAARLSNRTVVVSRAVVDQIRSKSPVLVVVPASTRESWRRHFRDWGHFAVGLLPGGSKGGEALTWVRAGLYEVVITTYDTFKDAVKPEGAASPVKGYAPELLAPRALPACLKVSWTAAAVIGDMPADEHLTEVKWEAIFFDEYHLVKNPLSQRGMAAAEFRGQTLIYGLTGTPIQNNLKELWWLMDLAVPDCLGDRDMFKAHFDAPLRKGRMLSATKTDVELEARGTPLKRRQAELDAIVKRHMLILKKETELAEYLPARSMHIVFCNPTPLQQGLYRAMLDLPEFKLLATASTFMTRQVLLXXXXXXXXXXXXXXXXXXXARCAAAAATXXXXXXXXXXXXXXXXXXSQALPQQDCCRTKLXXXXXXXXXXXGQPCDCGRVHEQTGLPLERGKCCWTLPLEEDAYGRPTNAVDARAALWFAGHPNGLSCVRCPWCCLFPALSRLSKVANHPAALQYDVRWSADKKRQAATFLECLPEVLVERMGGLQRSQRFEDMSDASMSGXXXXXXXXXXXXXXXMVKALLHQFNAERKRTLLCSLSTQTLDVIEACVIGWGYERLRLDGATPLDQRQRIVDEFNRMPGAPVLLVSTRAGGIGLNINGASRVIIYDVNWNPSHDHQAQDRCYRIGQDKADKAVEDKAVEVYRLISCGTIEELIYMRQLYKVQLAGSALDSKAGGGGARHFNAMQGVRGEEGELFGVANLLRHSDTSMLAEVRQRYQRKMTARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAELDDEARAERAMLLELLGAQAMPPADLTSKAAADEGVTDDEGEGXXXXXXXGADDPLRTGALPDGEQRKVSVFRRAPPXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXEGGDEKPPALPPAPAHLFIPRYK 4041
MEAMELEQDFEYVPPPPLAAPATHLKVAKLADLDVPELPAPVSRFKPELKVATLSDIGNTTKLQVRREFKVEQLKPLDKFSARASPAPLPRSSSNGSTAAVAAKPPKLKKRRKGTGWRLDDSSDSDGDAASPPLAVARPTLSEINGGSRNSQTRSVSSRDAPCSRPSCSPTRSQSQGHRPAPXXXXXXXXXXXXXXXXXXXGLWNSASDXXXXXXXXPPVITEAARARAFGTAAAAASPAHSATDVDNETDAPARAPSPPVRVASAFGERDTSERCLPQKRAAGAADRGXXXXXXXXXXXXXXGKARRARSGDAEEEHGSEHWGADGYEGXXXXXXXXAPPPVELHPEFENPHFLDDVVEPLELAGGATVPAAANRYLKSFQRETVQWLYERYHRQHGAIAALDMGLGKTVITVCFIAAILGKTGTRADRVALDARERAVRRAEAARLSNRTVVVSRAVVDQIRSKSPVLVVVPASTRESWRRHFRDWGHFAVGLLPGGSKGGEALTWVRAGLYEVVITTYDTFKDAVKPEGAASPVKGYAPELLAPRALPACLKVSWTAAAVIGDMPADEHLTEVKWEAIFFDEYHLVKNPLSQRGMAAAEFRGQTLIYGLTGTPIQNNLKELWWLMDLAVPDCLGDRDMFKAHFDAPLRKGRMLSATKTDVELEARGTPLKRRQAELDAIVKRHMLILKKETELAEYLPARSMHIVFCNPTPLQQGLYRAMLDLPEFKLLATASTFMTRQVLLXXXXXXXXXXXXXXXXXXXARCAAAAATXXXXXXXXXXXXXXXXXXSQALPQQDCCRTKLXXXXXXXXXXXGQPCDCGRVHEQTGLPLERGKCCWTLPLEEDAYGRPTNAVDARAALWFAGHPNGLSCVRCPWCCLFPALSRLSKVANHPAALQYDVRWSADKKRQAATFLECLPEVLVERMGGLQRSQRFEDMSDASMSGXXXXXXXXXXXXXXXMVKALLHQFNAERKRTLLCSLSTQTLDVIEACVIGWGYERLRLDGATPLDQRQRIVDEFNRMPGAPVLLVSTRAGGIGLNINGASRVIIYDVNWNPSHDHQAQDRCYRIGQDKADKAVEDKAVEVYRLISCGTIEELIYMRQLYKVQLAGSALDSKAGGGGARHFNAMQGVRGEEGELFGVANLLRHSDTSMLAEVRQRYQRKMTARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAELDDEARAERAMLLELLGAQAMPPADLTSKAAADEGVTDDEGEGXXXXXXXGADDPLRTGALPDGEQRKVSVFRRAPPXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXEGGDEKPPALPPAPAHLFIPRYK
Sbjct: 1 MEAMELEQDFEYVPPPPLAAPATHLKVAKLADLDVPELPAPVSRFKPELKVATLSDIGNTTKLQVRREFKVEQLKPLDKFSARASPAPLPRSSSNGSTAAVAAKPPKLKKRRKGTGWRLDDSSDSDGDAASPPLAVARPTLSEINGGSRNSQTRSVSSRDAPCSRPSCSPTRSQSQGHRPAPXXXXXXXXXXXXXXXXXXXGLWNSASDXXXXXXXXPPVITEAARARAFGTAAAAASPAHSATDVDNETDAPARAPSPPVRVASAFGERDTSERCLPQKRAAGAADRGXXXXXXXXXXXXXXGKARRARSGDAEEEHGSEHWGADGYEGXXXXXXXXAPPPVELHPEFENPHFLDDVVEPLELAGGATVPAAANRYLKSFQRETVQWLYERYHRQHGAIAALDMGLGKTVITVCFIAAILGKTGTRADRVALDARERAVRRAEAARLSNRTVVVSRAVVDQIRSKSPVLVVVPASTRESWRRHFRDWGHFAVGLLPGGSKGGEALTWVRAGLYEVVITTYDTFKDAVKPEGAASPVKGYAPELLAPRALPACLKVSWTAAAVIGDMPADEHLTEVKWEAIFFDEYHLVKNPLSQRGMAAAEFRGQTLIYGLTGTPIQNNLKELWWLMDLAVPDCLGDRDMFKAHFDAPLRKGRMLSATKTDVELEARGTPLKRRQAELDAIVKRHMLILKKETELAEYLPARSMHIVFCNPTPLQQGLYRAMLDLPEFKLLATASTFMTRQVLLXXXXXXXXXXXXXXXXXXXARCAAAAATXXXXXXXXXXXXXXXXXXSQALPQQDCCRTKLXXXXXXXXXXXGQPCDCGRVHEQTGLPLERGKCCWTLPLEEDAYGRPTNAVDARAALWFAGHPNGLSCVRCPWCCLFPALSRLSKVANHPAALQYDVRWSADKKRQAATFLECLPEVLVERMGGLQRSQRFEDMSDASMSGXXXXXXXXXXXXXXXMVKALLHQFNAERKRTLLCSLSTQTLDVIEACVIGWGYERLRLDGATPLDQRQRIVDEFNRMPGAPVLLVSTRAGGIGLNINGASRVIIYDVNWNPSHDHQAQDRCYRIGQDKADKAVEDKAVEVYRLISCGTIEELIYMRQLYKVQLAGSALDSKAGGGGARHFNAMQGVRGEEGELFGVANLLRHSDTSMLAEVRQRYQRKMTARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAELDDEARAERAMLLELLGAQAMPPADLTSKAAADEGVTDDEGEGXXXXXXXGADDPLRTGALPDGEQRKVSVFRRAPPXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXEGGDEKPPALPPAPAHLFIPRYK 1347
BLAST of jgi.p|Trimin1|350326 vs. uniprot
Match: D7FX84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX84_ECTSI) HSP 1 Score: 417 bits (1071), Expect = 1.160e-119 Identity = 281/826 (34.02%), Postives = 414/826 (50.12%), Query Frame = 1
Query: 1030 ELHPEFENPHFLDDVVEPLELAGGATVPAAANRYLKSFQRETVQWLYERYHRQHGAIAALDMGLGKTVITVCFIAAILGKTGTRADRVALDARERAVRRAEAARLSNRTVVVSRAVVDQIRSKSPVLVVVPASTRESWRRHFRDWGHFAVGLLPGGSKGGEALTWVRAGLYEVVITTYDTFKDAVKPEGAASPVKGYAPELLAPRALPACLKVSWTAAAVIGDMPADEHLTEVKWEAIFFDEYHLVKNPLSQRGMAAAEFRGQTLIYGLTGTPIQNNLKELWWLMDLAVPDCLGDRDMFKAHFDAPLRKGRMLSATKTDVELEARGTPLKRRQAELDAIVKRHMLILKKETELAEYLPARSMHIVFCNPTPLQQGLYRAMLDLPEFKLLATASTFMTRQVLLXXXXXXXXXXXXXXXXXXXARCAAAAATXXXXXXXXXXXXXXXXXXSQALPQQDCCRTKLXXXXXXXXXXXGQPCDCGRVHEQTGLPLERGKCCWTLPLEEDAYGRPTNAVDARAALWFAGHPNGLSCVRCPWCCLFPALSRLSKVANHPAALQYDVRWSADKKRQAATFLE-CLPEVLVERMGGLQRSQRFEDMSDASMSGXXXXXXXXXXXXXXXMVKALLHQFNAERKRTLLCSLSTQTLDVIEACVIGWGYERLRLDGATPLDQRQRIVDEFNR-MPGAPVLLVSTRAGGIGLNINGASRVIIYDVNWNPSHDHQAQDRCYRIGQDKADKAVEDKAVEVYRLISCGTIEELIYMRQLYKVQLAGSALDSKAGGGGARHFNAMQGVRGEEGELFGVANLLRHSDTSMLAEVRQRYQRKMTA 3501
+L P E+P +L +V P +L G + + NRYL+ +QRE V+WLY ++ G I DMGLGKTV ++ +A++L K+GT D+ E RR E S+ + P L+V PA+ W + + WGHFA L G + + ++AG YEVV T+YD + AC+ + L + +++A+ FDEYH +K+ + AA E R + ++GLTGT IQN++KELW+L+ L P +G++ F HF P+++ R ++AT +D L ++R ELD I ++M+ K+ EL + L +S +VFC+ + +Q+ LY+ +L LPEF+LLA A +PC+CGR +G P R +CC P D+ G + VD RA L+ HP + C +CP+CC PA+S+L K+ANHP LQ ++R K++Q F E + E MGGL+RSQ+F D+S + G ++ LL +F+ R + L+ S ST LDV+E+ V GY RLDG T +RQ ++EFN G V L+STRAGG GLN++ ASRV++YDVNWNP+ QAQDR YRIGQ + V V+RLIS GTIEE+ YMRQ+YK+Q+ +A+ +A GG R FNA+QG + ++GELFG+ NLL+ SD S+L +R +++ + A
Sbjct: 430 DLKPHIEDPPWLGKLV-PFDLGEGGFINPSINRYLRDYQREGVRWLYAKFQAGQGGILGDDMGLGKTVQSIALLASVLRKSGT-----GRDSEELRRRRKEGLPASS--------------TGLPWLIVAPAAVVPEWIKQIKVWGHFAAYQLESGRDADDLMVALKAGRYEVVATSYDLLR--------------------------ACV----------------DRLKKQRFDAVIFDEYHTIKSATTMVSQAACELRTKR-VFGLTGTLIQNDMKELWFLLHLIDPLAVGEQSRFTEHFSEPIKRARAMNATASDRRLG------EKRLKELDGIRDKNMIRRTKDEELGDVLKGKSDTVVFCDLSEVQRELYQRVLSLPEFQLLARAK---------------------------------------------------------------------------------EPCNCGR----SGRPT-RARCCHKTP---DSRGGGGDGVDPRAVLFRRLHPTLMECDKCPFCCQLPAVSKLQKIANHPCLLQENIRDPEHKRQQQRQFAEVAFTDRAREIMGGLERSQKFLDVSKVGVCGKMKS------------LETLLAKFHETRDKVLVFSWSTAMLDVLESFVGAKGYVYRRLDGTTSSKERQARINEFNSDRAGVFVFLISTRAGGQGLNLHTASRVVLYDVNWNPALGLQAQDRAYRIGQ--------KRKVAVFRLISKGTIEEMCYMRQIYKLQITSAAMGDQARGG-RRQFNAVQGSKEQQGELFGIQNLLKFSDDSLLKTLRMKHEAGLAA 1076
BLAST of jgi.p|Trimin1|350326 vs. uniprot
Match: D7FIQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ3_ECTSI) HSP 1 Score: 364 bits (935), Expect = 5.900e-101 Identity = 280/862 (32.48%), Postives = 386/862 (44.78%), Query Frame = 1
Query: 1033 LHPEFENPHFLDDVVEPLEL---AGG--ATVPAAANRYLKSFQRETVQWLYERYHRQHG---AIAALDMGLGKTVITVCFIAAILGKTGTRADRVALDARERAVRRAEAARLSNRTVVVSRAVVDQIRSKSPVLVVVPASTRESWRRHFRDWGHFAVGLLP-GGSKGG-EALTWV----RAGLYEVVITTYDTFKDAVKPEGAASPVKGYAPELLAPRALPACLKVSWTAAAVIGDMPADEHLTEVKWEAIFFDEYHLVKNPLSQRGMAAAEFRGQTLIYGLTGTPIQNNLKELWWLMDLAVPDCLGDRDMFKAHFDAPLRKGRMLSATKTDVELEARGTPLKRRQAELDAIVKRHMLILKKETELAEYLPARSMHIVFCNPTPLQQGLYRAMLDLPEFKLLATASTFMTRQVLLXXXXXXXXXXXXXXXXXXXARCAAAAATXXXXXXXXXXXXXXXXXXSQALPQQDCCRTKLXXXXXXXXXXXGQPCDCGRVHEQTGLPLERGKCCWTLPLEEDAYGRPTNAVDARAALWFAGHPNGLSCVR---CPWCCLFPALSRLSKVANHPAALQ----YDVRWSADKKRQAATFLECL----PEVLVERMGGLQRSQRFEDMS----------------DASMSGXXXXXXXXXXXXXXXM--VKALLHQFNAERKRTLLCSLSTQTLDVIEACVIGWGYERLRLDGATPLDQRQRIVDEFNRMPGAP--VLLVSTRAGGIGLNINGASRVIIYDVNWNPSHDHQAQDRCYRIGQDKADKAVEDKAVEVYRLISCGTIEELIYMRQLYKVQLAGSALDSKAGGGGARHFNAMQGVRGEEGELFGVANLLRHSDTSMLAEVRQRY 3483
L P NP F D PL L AGG A VPA+ANRYL+ +QRE V+++Y R G I A DMGLGKTV T+ + A+L KTGTR DR+ + R+ A PVL+V P S +W H + WGHF + GGS G E+L V +AGL EVV+ F +++ E L+E W FDE+H KNP + + A + + GLTGT +QNNL E W L++ P C+G +D FK HF P+ +GR A++ DV L R + + + + +++ + + L + L + +VFCN T +Q+ +YR +L LPEFKLLA AS PC CGR ++G CC P ++ + + VD RA +W HP+ C + CP+CC F A+S+L K+ANHP+ LQ Y +A K F V++ + G S D ++ M +K LL +F + K LL S ST LD+++A GY L+LDG T DQRQ+++D F + V L+ST AGG GLN+ AS+VI+YDVNWNP+ D QA+DR YRIGQ K VEV+RL+S GTIEEL YMRQ+YK+Q + + + KA GG R F +QGVR E+GEL+G++NL++ S SML E+RQ+Y
Sbjct: 247 LKPTIRNPPFEDPGKRPLVLTNEAGGERAEVPASANRYLQGYQREGVEFMYRRVRHTDGPKGVILADDMGLGKTVQTIALLLALLKKTGTRRDRMDIKRRKDCKGHVSVA-------------------GKPVLIVCPRSVLPNWTGHLKTWGHFETACITSGGSTAGPESLQRVESRLKAGLLEVVVVGETMFANSI------------------------------------------ETLSEFDWLTAVFDEFHHYKNPYTNKNRAVQKLVNAEVFIGLTGTLVQNNLDEYWSLLNTVQPGCVGRQDDFKRHFTEPILRGRKRGASRADVLLG-------RERIDEMGVTRDKVVLRRVKDILGDLLKGKIGTVVFCNLTHVQKLVYRTVLSLPEFKLLANAS---------------------------------------------------------------------------------DPCPCGRPDARSG------SCCGMWPQDDTS----EDLVDPRAVIWRRFHPDLEVCKKGPGCPYCCSFSAISKLQKLANHPSLLQVKPPYKYGENAHKMLDDIAFANVAFSEEARVIMADLPGQHGGGAVSGSSIGXXXXXXXXXXXXEWDRRLARPENFLQLCRDDTCGKMRTLKVLLERFKNKHK-VLLFSYSTAMLDILQALCSSQGYTFLKLDGNTAKDQRQKMIDRFTKQNAIQNNVFLISTTAGGTGLNLQAASKVILYDVNWNPAQDAQAEDRAYRIGQ--------LKEVEVFRLVSTGTIEELTYMRQIYKLQTSAATMGEKAEGG-LRQFEGVQGVREEQGELWGISNLMKFSGESMLLELRQKY 939
BLAST of jgi.p|Trimin1|350326 vs. uniprot
Match: A0A8J2S8E9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S8E9_9STRA) HSP 1 Score: 307 bits (787), Expect = 2.050e-83 Identity = 249/803 (31.01%), Postives = 364/803 (45.33%), Query Frame = 1
Query: 1096 GGATVPAAANRYLKSFQRETVQWLYERYHRQHGAIAALDMGLGKTVITVCFIAAILGKTGTR-ADRVALDARERAVRRAEAARLSNRTVVVSRAVVDQIRSKSPVLVVVPASTRESWRRHFRDWGHFAVGLLPGGSKGGEALTWVRAGLYEVVITTYDTFKDAVKPEGAASPVKGYAPELLAPRALPACLKVSWTAAAVIGDMPADEHLTEVKWEAIFFDEYHLVKNPLSQR--GMAAAEFRGQTLIYGLTGTPIQNNLKELWWLMDLAVPDCLGDRDMFKAHFDAPLRKGRMLSATKTDVELEARGTPLKRRQAELDAIVKRHMLILKKETELAEYLP-ARSMHIVFCNPTPLQQGLYRAMLDLPEFKLLATASTFMTRQVLLXXXXXXXXXXXXXXXXXXXARCAAAAATXXXXXXXXXXXXXXXXXXSQALPQQDCCRTKLXXXXXXXXXXXGQPCDCGRVHEQTGLPLERGKCCWTLPLEEDAYGRPTNAVDARAALWFAG---HPNGLSCVRCPWCCLFPALSRLSKVANHPAALQYDVRWSADKKRQAATFLECLPEVLVERMGGLQRSQRFEDMSDASMSGXXXXXXXXXXXXXXXMVKALLHQFNAERK--RTLLCSLSTQTLDVIEACVIGWGYERLRLDGATPLDQRQRIVDEFNRMPGAPVLLVSTRAGGIGLNINGASRVIIYDVNWNPSHDHQAQDRCYRIGQDKADKAVEDKAVEVYRLISCGTIEELIYMRQLYKVQLAGSALDSKAGGGGARHFNAMQGVRGE-EGELFGVANLLRHS-DTSMLAEV 3471
G TVP+ +RYL +Q E V+WL+ + G I A DMGLGKT+ TV F AA+LG TG+R D A R RA RR EA ++P LV+ P S E W+R + V + G++ +A + G +V++TT+ K+ + D D +W + DE H KNP S+R + A + R L +GLTGTP+QNN+ EL L+ L LG++ FK ++ + +G A + ARG +RR+ +L I +++L KE EL+E L + IV C +PLQ LYR +++ P+ + L A +PCDCGR E+ RGKCC L G D A +FA + +G C +CP C F +S+LSK+ANHP ++ D ++ D+ + A C E + R+ R++D+ D + +G + LL +F+ E + L+ S STQTLD++E +R+DGAT QRQ+ VD+FN P + +ST+AGG GLN+ A+RV+I+DVNWNP+ D QAQDR YR+GQ + V VY+L+S GTIEEL MRQLYK ++ GSA+++K G +GV+G+ +GELFG+ NLL++S D+S L ++
Sbjct: 301 GSITVPSTIHRYLFPYQVEGVKWLWRQASSGRGGILADDMGLGKTLQTVAFFAALLGCTGSRRTDSAAARKRRRAARRGEA----------------PDPDRAPALVLAPTSLLEGWKRELAKYTLLNVSVAKTGAEAAQAARDAKNGARDVLVTTHSLAKN-------------------------------------LSDSGPD------RWSCVIVDEAHGYKNPASKRYEELRAIQARADVL-FGLTGTPLQNNMDELHALLSLCTDAVLGNKSDFKETYENTIARGEQRGADRN-----ARGLASERRK-QLQRITSKYILRRTKEEELSEELTHGKEEKIVMCKLSPLQATLYRNVVESPDVECLKRAK---------------------------------------------------------------------------------EPCDCGREGEK------RGKCCHRADLLPRKLGG-----DFEARCYFASSCKNGDGQPCEKCPQCYTFSVMSKLSKIANHPELIKLDAKYRDDEDKVADCKKFCTLAHGSEP-ASIIRTTRWKDLRDETQAGKLGA------------LHGLLDRFDRESPPAKVLIFSASTQTLDILEGTFKTVYPNSVRIDGATNGAQRQKNVDKFNSDPQVFLAYISTKAGGTGLNLQAANRVVIFDVNWNPTFDAQAQDRAYRLGQ--------MREVRVYKLVSRGTIEELTLMRQLYKNKVTGSAIEAKQRKQGEYDDRRFKGVKGKRDGELFGLGNLLKYSEDSSFLNDI 924
BLAST of jgi.p|Trimin1|350326 vs. uniprot
Match: UPI001CF17D00 (DNA excision repair protein ERCC-6-like 2 isoform X4 n=1 Tax=Bufo gargarizans TaxID=30331 RepID=UPI001CF17D00) HSP 1 Score: 283 bits (723), Expect = 2.550e-77 Identity = 240/799 (30.04%), Postives = 349/799 (43.68%), Query Frame = 1
Query: 1099 GATVPAAANRYLKSFQRETVQWLYERYHRQHGAIAALDMGLGKTVITVCFIAAILGKTGTRADRVALDARERAVRRAEAARLSNRTVVVSRAVVDQIRSKSPVLVVVPASTRESWRRHFRDWGHFAVGLLPGGSKGGEALTWVRAGLYEVVITTYDTFKDAVKPEGAASPVKGYAPELLAPRALPACLKVSWTAAAVIGDMPADEHLTEVKWEAIFFDEYHLVKNPLSQRGMAAAEFRGQTLIYGLTGTPIQNNLKELWWLMDLAVPDCLGDRDMFKAHFDAPLRKGRMLSATKTDVELEARGTPLKRRQAELDAIVKRHMLILKKETEL-AEYLPARSMHIVFCNPTPLQQGLYRAMLDLPEFKLLATASTFMTRQVLLXXXXXXXXXXXXXXXXXXXARCAAAAATXXXXXXXXXXXXXXXXXXSQALPQQDCCRTKLXXXXXXXXXXXGQPCDCGRVHEQTGLPLERGKCCWTLPLEEDAYGRPTNAVDARAALWFAGHPNGLSCVRCPWCCLFPALSRLSKVANHPAALQYDVRWSADKKRQAATFLECLPEVLVERMGGLQRSQR--FEDMSDASMSGXXXXXXXXXXXXXXXMVKALLHQFNAERKRTLLCSLSTQTLDVIEACVIGWGYERLRLDGATPLDQRQRIVDEFNRMPGAPVLLVSTRAGGIGLNINGASRVIIYDVNWNPSHDHQAQDRCYRIGQDKADKAVEDKAVEVYRLISCGTIEELIYMRQLYKVQLAGSALDSKAGGGGARHFNAMQGVRGEEGELFGVANL--LRHSDTSMLAEVRQR 3480
G VP NRYL+ +QRE VQ+LYE Y R G I DMGLGKT+ + F+AA+L K GTR D + + E +RR +++ T K L+V P S +WR WG+F + ++ G K E L +R G E+ +TTY+T + CL + L V+W A+ DE H +KNP ++ A R + I GLTGT +QNN++ELW ++D AVP CLG + F + P+ G+ +ATK ++ A G + ++ A K L L++ L + LP + IV+C+ T Q+ +Y+ +L+ P+ L+ S RC+ C+ G+ +R CC+ + + YG F L+ L KVANH A LQ D S K+Q EV + +Q+S+ FE +SD SG +++ LL+ + + LL S ST+ LDV+E + G E RLDG T + R +IV EFN M + LVST AGG+GLN GA+ V+++D WNP++D QA DR YRIGQ + V+V RLIS GT+EE+IY+RQ+YK QL A+ S+ R+F A+QG + +GELFG+ NL LR T + ++ +R
Sbjct: 118 GICVPYTINRYLRDYQREGVQFLYEHYDRSTGCILGDDMGLGKTIQVISFLAAVLHKKGTRED-IENNMPEFLLRRMRKEHITSST-------------KRVFLIVSPLSVLFNWRDELETWGYFKISVIHGNRKDFELLR-LRQGKSEIALTTYETLR--------------------------LCL----------------DDLNSVEWSAVIVDEVHKIKNPKARVTGAMKALRCKIRI-GLTGTILQNNMEELWCVVDWAVPGCLGGKKQFIEEYSHPIELGQRHNATKREL---ATGRKVMQKLAS-----KMSSLFLRRTKALISSQLPKKEDRIVYCSLTEFQKAVYQTVLETPDVSLVLRGSE----------------------------RCS---------------------------------------------------CNSGK---------KRRNCCYRV----NQYGESVKTQ------------------------YFSYLAILRKVANHAALLQSD---SNTSKKQEDHIQRICGEVFSKFPEFIQQSKEAAFETISDPKYSGKMK------------VLQQLLNHCRKNKDKVLLFSFSTKLLDVLERYCMASGLEYRRLDGGTKAEDRVKIVKEFNSMQDVNICLVSTMAGGLGLNFVGANVVVVFDPTWNPANDLQAIDRAYRIGQ--------CRDVKVLRLISLGTVEEIIYLRQVYKQQLHCVAIGSE---NAKRYFKAVQGSKEHKGELFGIHNLFKLRTQGTCLTRDILER 708
BLAST of jgi.p|Trimin1|350326 vs. uniprot
Match: A0A8C7RQH1_ONCMY (Excision repair cross-complementation group 6-like 2 n=3 Tax=Oncorhynchus TaxID=8016 RepID=A0A8C7RQH1_ONCMY) HSP 1 Score: 290 bits (741), Expect = 3.810e-77 Identity = 236/792 (29.80%), Postives = 340/792 (42.93%), Query Frame = 1
Query: 1078 EPLELA-GGATVPAAANRYLKSFQRETVQWLYERYHRQHGAIAALDMGLGKTVITVCFIAAILGKTGTRADRVALDARERAVRRAEAARLSNRTVVVSRAVVDQIRSKSPVLVVVPASTRESWRRHFRDWGHFAVGLLPGGSKGGEALTWVRAGLYEVVITTYDTFKDAVKPEGAASPVKGYAPELLAPRALPACLKVSWTAAAVIGDMPADEHLTEVKWEAIFFDEYHLVKNPLSQRGMAAAEFRGQTLIYGLTGTPIQNNLKELWWLMDLAVPDCLGDRDMFKAHFDAPLRKGRMLSATKTDVELEARGTPLKRRQAELDAIVKRHMLILKKETELAEYLPARSMHIVFCNPTPLQQGLYRAMLDLPEFKLLATASTFMTRQVLLXXXXXXXXXXXXXXXXXXXARCAAAAATXXXXXXXXXXXXXXXXXXSQALPQQDCCRTKLXXXXXXXXXXXGQPCDCGRVHEQTGLPLERGKCCWTLPLEEDAYGRPTNAVDARAALWFAGHPNGLSCVRCPWCCLFPALSRLSKVANHPAALQYDVRWSADKKRQAATFLECLPEVLVERMGGLQ---RSQRFEDMSDASMSGXXXXXXXXXXXXXXXMVKALLHQFNAERKRTLLCSLSTQTLDVIEACVIGWGYERLRLDGATPLDQRQRIVDEFNRMPGAPVLLVSTRAGGIGLNINGASRVIIYDVNWNPSHDHQAQDRCYRIGQDKADKAVEDKAVEVYRLISCGTIEELIYMRQLYKVQLAGSALDSKAGGGGARHFNAMQGVRGEEGELFGVANLLR 3441
EPL L+ G VP NRYL+ +Q+E +Q++Y+ Y + G I DMGLGKT+ + F+AA+LGKTGT D +NR + + Q+ + L+V P S +W+ WGHF ++ G K E L +R G E+ +TTY+T + + E + W A+ DE H +KNP SQ A + R + GLTGT +QNNL ELW +MD A+P CLG FK F P+ G+ S TK R RR A H + + + + E LP + +V+C+ T QQ +Y+A+LD + LL +S + CDC H R KCC+ + NA R + F L+ L KVANH A LQ +W+ KK++ ++ + E + ++ + FE MSD SG +++ LL + + + LL SLST+ LDV+E+ + G E RLDG T +R +IV EFN P + LVST AGG+GLN GA+ V+++D WNP++D QA DR YRIGQ + V+V+RLIS GT+EE+IY+RQ+YK QL S + ++ R+F+A+QG ++GELFG+ NL R
Sbjct: 102 EPLVLSQSGVAVPYTINRYLRYYQKEGIQFIYDNYAQSRGCILGDDMGLGKTIQVIGFLAAVLGKTGTWEDIE-----------------NNRPQFLLTQIPTQV-ALFVFLIVAPLSVLYNWKEELETWGHFLTVVVHGLRKE-EELARIRRGRSEIALTTYETLRLYL------------------------------------------EQFNSIDWSAVIVDEAHKIKNPNSQITGAMKDLRCPVRV-GLTGTILQNNLDELWCVMDWAIPRCLGSLGNFKNMFSDPIELGQKHSVTK-------RALATGRRAVRALAAKLSHWFLRRTKALIREQLPKKDDRVVYCSLTSFQQTVYQAVLDTEDVTLLLRSS---------------------------------------------------------------------------------EKCDCHSGHS-------RRKCCYKV-----------NARGVRVTDLY-----------------FSYLAILRKVANHVALLQS--KWNTSKKQEQ--YVNEICEKVFQKFPDFTEKCKQAAFEAMSDPMYSGKMK------------VLQRLLKHYTQRKDKVLLFSLSTKLLDVLESYCMADGLEYSRLDGNTKPRERLKIVKEFNSCPDINLCLVSTMAGGLGLNFVGANIVVLFDPTWNPANDLQAIDRAYRIGQ--------CRDVKVFRLISLGTVEEVIYLRQVYKQQLQSSVMGKESA---RRYFDAVQGSDDQKGELFGIQNLFR 681
BLAST of jgi.p|Trimin1|350326 vs. uniprot
Match: A0A7S2W4G0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4G0_9STRA) HSP 1 Score: 282 bits (721), Expect = 4.680e-77 Identity = 236/780 (30.26%), Postives = 339/780 (43.46%), Query Frame = 1
Query: 1219 LGKTVITVCFIAAILGKTGTRADRVALDARERAVRRAEAARLSNRTVVVSRAVVDQIRSKSPVLVVVPASTRESWRRHFRDWGHFAVGLL--PGGSKGGEA-LTWVRAGLYEVVITTYDTFKDAVKPEGAASPVKGYAPELLAPRALPACLKVSWTAAAVIGDMPADEHLTEVKWEAIFFDEYHLVKNPLSQRGMAAAEFRG-QTLIYGLTGTPIQNNLKELWWLMDLAVPDCLGDRDMFKAHFDAPLRKGRMLSATKTDVELEARGTPLKRRQAELDAIVKRHMLILKKETELAEYLPARSMHIVFCNPTPLQQGLYRAMLDLPEFKLLATASTFMTRQVLLXXXXXXXXXXXXXXXXXXXARCAAAAATXXXXXXXXXXXXXXXXXXSQALPQQDCCRTKLXXXXXXXXXXXGQPCDCGRVHEQTGLPLERGKCCWTLPLEE--DAYGRPTNAV-------------------DARAALW--FAGHPNGLSCVRCPWCCLFPALSRLSKVANHPAALQYDVRWSADKKRQAATFLECL--PEVLVERMGGLQRSQRFEDMSDASMSGXXXXXXXXXXXXXXXMVKALLHQFNAER--KRTLLCSLSTQTLDVIEACVIGWGYERLRLDGATPLDQRQRIVDEFNRMPGAP-VLLVSTRAGGIGLNINGASRVIIYDVNWNPSHDHQAQDRCYRIGQDKADKAVEDKAVEVYRLISCGTIEELIYMRQLYKVQLAGSALDSKAGGGGARHFNAMQGVRGEEGELFGVANLLRHSDTSML 3462
LGKTV + F+AA+ K G AD + L +R R R + AA T ++S P L+ VP +W + WG F V ++ P + E + GL EVV+ + D + P HLT V W + DE H K P ++R MA + GLTGTP+ N+L EL+ LM+L P CLG D F+ + P+++ R +A + + ARGT R A++ A + L K+ EL + LP + +VFC+ +PLQ LYR +L LP+F AA + G+PCDCGR Q + RG+CC+T P + G+ ++V D RA +W H G C RCP C +FP +++L KVANHPA LQ + R K+ F E PE+L G R++ S + G +++ +L F A R ++ ++ S S QTLD+I+ I G+ LR DG+TP +RQ ++DEFN + + + L STRAGG+G+N+ A +V+I+D NWNP++D QAQDRCYRIGQ K V+V RL++ GTIEEL+YMRQLYK ++ +D R F+A+Q E GELFG +N+ + L
Sbjct: 1 LGKTVQVIAFLAAVFSKLGKVADGLVLTSRRRRHRESIAAACP--TSLMSPGSSSDPNFPGPALICVPVCVLSNWASELKKWGKFEVKVIKSPVHEEYVEGVIASCMEGLVEVVLVGHSLL-DRLNP-----------------------------------------HLTRVDWSVLVIDECHAFKEPSAKRTMALMRLVPCARMRLGLTGTPMSNHLMELFNLMNLLAPGCLGSHDAFQHTYMRPIKRARAANANEETI---ARGTERHERLAKVKAP---YFLRRSKKVELKDMLPIKEQLVVFCHLSPLQVQLYRRLLQLPDF--------------------------------------AAVRLS-------------------------------------------GEPCDCGR---QGAI---RGECCYTAPFHGSGEQQGQAVHSVANGSHRSLTSVFADSAFEIDPRAVIWRQMPSHSEGSLCERCPNCLIFPCIAKLQKVANHPALLQVNSRDPKAKRDAVKAFAEVAFTPELLEPLGGTYTRAENVLMTSQTEVCGKLR------------VLEDILTAFWAARPVEKCVVFSWSVQTLDIIQDLCITRGWPYLRFDGSTPQGRRQGLIDEFNDLTKSNFIFLCSTRAGGVGINLQSARKVVIFDANWNPAYDQQAQDRCYRIGQ--------RKDVQVLRLVAKGTIEELVYMRQLYKSHISEETVDGTISN---RIFHAVQDE--ENGELFGKSNIFSFDEAGHL 618
BLAST of jgi.p|Trimin1|350326 vs. uniprot
Match: A0A091RCR4_MERNU (Putative DNA repair and recombination protein RAD26-like (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A091RCR4_MERNU) HSP 1 Score: 280 bits (716), Expect = 4.890e-77 Identity = 235/808 (29.08%), Postives = 341/808 (42.20%), Query Frame = 1
Query: 1042 EFENPHFLDDVVEPLELA-----GGATVPAAANRYLKSFQRETVQWLYERYHRQHGAIAALDMGLGKTVITVCFIAAILGKTGTRADRVALDARERAVRRAEAARLSNRTVVVSRAVVDQIRSKSPVLVVVPASTRESWRRHFRDWGHFAVGLLPGGSKGGEALTWVRAGLYEVVITTYDTFKDAVKPEGAASPVKGYAPELLAPRALPACLKVSWTAAAVIGDMPADEHLTEVKWEAIFFDEYHLVKNPLSQRGMAAAEFRGQTLIYGLTGTPIQNNLKELWWLMDLAVPDCLGDRDMFKAHFDAPLRKGRMLSATKTDVELEARGTPLKRRQAELDAIVKRHMLILKKETELAEYLPARSMHIVFCNPTPLQQGLYRAMLDLPEFKLLATASTFMTRQVLLXXXXXXXXXXXXXXXXXXXARCAAAAATXXXXXXXXXXXXXXXXXXSQALPQQDCCRTKLXXXXXXXXXXXGQPCDCGRVHEQTGLPLERGKCCWTLPLEEDAYGRPTNAVDARAALWFAGHPNGLSCVRCPWCCLFPALSRLSKVANHPAALQYDVRWSADK---KRQAATFLECLPEVLVERMGGLQRSQRFEDMSDASMSGXXXXXXXXXXXXXXXMVKALLHQFNAERKRTLLCSLSTQTLDVIEACVIGWGYERLRLDGATPLDQRQRIVDEFNRMPGAPVLLVSTRAGGIGLNINGASRVIIYDVNWNPSHDHQAQDRCYRIGQDKADKAVEDKAVEVYRLISCGTIEELIYMRQLYKVQLAGSALDSKAGGGGARHFNAMQGVRGEEGELFGVANLLR 3441
+ E P+F D + +A G +P NRYL+ +QRE Q+LY+ Y + G I DMGLGKT+ + F+AA+L K GTR D + + E +R N K L+V P S +W+ WG+F V +L G SK + L+ +R G YEV +TTY+ + + DE V+W A+ DE H +KNP +Q + I GLTGT +QNN+KELW +MD AVP LG R FK F P+ G+ +ATK ++ R + RR L +++ LP + +V+C+ T Q+ +Y+A+L+ + L+ A G+PC C + R CC+ + +AYG A+ F L+ L KVANH A LQ + + KR + P+ + L + FE +SD SG +++ LL+ F + + LL S ST+ LDV+E + G + RLDG T + R RIV EFN + + LVST AGG+GLN GA+ VI++D WNP++D QA DR YRIGQ KAV+V+RLIS GT+EE++Y+RQ+YK QL + + S+ R+F A+QG + +GELFG+ NL +
Sbjct: 73 DLEKPYFPDQNLPSPAVAFKLSDNGDFIPYTINRYLRDYQREGAQFLYQHYANKRGCILGDDMGLGKTIQVISFLAAVLHKKGTRED-IENNMPEFLLRTMNKESKCN--------------PKKTFLIVAPLSVLYNWKDELETWGYFKVCVLHG-SKKDDDLSRIRQGKYEVALTTYEILR-----------------------------------------LYLDE-FNSVEWSAVIVDEAHRIKNPKAQVTQTMKSLKCSVRI-GLTGTILQNNMKELWCVMDWAVPGLLGSRAHFKKKFSDPVEHGQRHTATKRELATGRRA--MARRGGAL----------------ISDQLPKKEDRMVYCSLTEFQKAVYQAVLETEDVNLVLRA---------------------------------------------------------------------------------GEPCTCNSGRK-------RKNCCYKV----NAYGETIKALR------------------------FSYLTILQKVANHAALLQTENTTKPQEAHIKRVCSQVFASFPDFVQ-----LSKDAAFETISDPKYSGKMK------------VLQQLLNHFQKNKDKVLLFSFSTKLLDVLEQYCMASGLDYRRLDGNTKSEDRIRIVREFNSIQEINICLVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAIDRAYRIGQ--------YKAVKVFRLISLGTVEEMMYLRQVYKQQLHCAVVGSE---NAKRYFEAVQGSKEHQGELFGIHNLFK 659
BLAST of jgi.p|Trimin1|350326 vs. uniprot
Match: A0A8C7VXB1_ONCMY (Excision repair cross-complementation group 6-like 2 n=1 Tax=Oncorhynchus mykiss TaxID=8022 RepID=A0A8C7VXB1_ONCMY) HSP 1 Score: 291 bits (746), Expect = 1.030e-76 Identity = 236/793 (29.76%), Postives = 342/793 (43.13%), Query Frame = 1
Query: 1078 EPLELA-GGATVPAAANRYLKSFQRETVQWLYERYHRQHGAIAALDMGLGKTVITVCFIAAILGKTGTRADRVALDARERAVRRAEAARLSNRT-VVVSRAVVDQIRSKSPVLVVVPASTRESWRRHFRDWGHFAVGLLPGGSKGGEALTWVRAGLYEVVITTYDTFKDAVKPEGAASPVKGYAPELLAPRALPACLKVSWTAAAVIGDMPADEHLTEVKWEAIFFDEYHLVKNPLSQRGMAAAEFRGQTLIYGLTGTPIQNNLKELWWLMDLAVPDCLGDRDMFKAHFDAPLRKGRMLSATKTDVELEARGTPLKRRQAELDAIVKRHMLILKKETELAEYLPARSMHIVFCNPTPLQQGLYRAMLDLPEFKLLATASTFMTRQVLLXXXXXXXXXXXXXXXXXXXARCAAAAATXXXXXXXXXXXXXXXXXXSQALPQQDCCRTKLXXXXXXXXXXXGQPCDCGRVHEQTGLPLERGKCCWTLPLEEDAYGRPTNAVDARAALWFAGHPNGLSCVRCPWCCLFPALSRLSKVANHPAALQYDVRWSADKKRQAATFLECLPEVLVERMGGLQ---RSQRFEDMSDASMSGXXXXXXXXXXXXXXXMVKALLHQFNAERKRTLLCSLSTQTLDVIEACVIGWGYERLRLDGATPLDQRQRIVDEFNRMPGAPVLLVSTRAGGIGLNINGASRVIIYDVNWNPSHDHQAQDRCYRIGQDKADKAVEDKAVEVYRLISCGTIEELIYMRQLYKVQLAGSALDSKAGGGGARHFNAMQGVRGEEGELFGVANLLR 3441
EPL L+ G VP NRYL+ +Q+E +Q++Y+ Y + G I DMGLGKT+ + F+AA+LGKTGT D +NR ++++ + + + L+V P S +W+ WGHF ++ G K E L +R G E+ +TTY+T + + E + W A+ DE H +KNP SQ A + R + GLTGT +QNNL ELW +MD A+P CLG FK F P+ G+ S TK R RR A H + + + + E LP + +V+C+ T QQ +Y+A+LD + LL +S + CDC H R KCC+ + NA R + F L+ L KVANH A LQ +W+ KK+Q ++ + E + ++ + FE MSD SG +++ LL + + + LL SLST+ LDV+E+ + G E RLDG T +R +IV EFN P + LVST AGG+GLN GA+ V+++D WNP++D QA DR YRIGQ + V+V+RLIS GT+EE+IY+RQ+YK QL S + ++ R+F+A+QG ++GELFG+ NL R
Sbjct: 103 EPLVLSQSGVAVPYTINRYLRYYQKEGIQFIYDNYAQSRGCILGDDMGLGKTIQVIGFLAAVLGKTGTWEDIE-----------------NNRPQFLLTQIPTQRSKPRKVFLIVAPLSVLYNWKEELETWGHFLTVVVHGLRKE-EELARIRRGRSEIALTTYETLRLYL------------------------------------------EQFNSIDWSAVIVDEAHKIKNPNSQITGAMKDLRCPVRV-GLTGTILQNNLDELWCVMDWAIPRCLGSLGNFKNMFSDPIELGQKHSVTK-------RALATGRRAVRALAAKLSHWFLRRTKALIREQLPKKDDRVVYCSLTSFQQTVYQAVLDTEDVTLLLRSS---------------------------------------------------------------------------------EKCDCHSGHS-------RRKCCYKV-----------NARGVRVTDLY-----------------FSYLAILRKVANHVALLQS--KWNTSKKQQ---YVNEICEKVFQKFPDFTEKCKQAAFEAMSDPMYSGKMK------------VLQRLLKHYTQRKDKVLLFSLSTKLLDVLESYCMADGLEYSRLDGNTKPRERLKIVKEFNSCPDINLCLVSTMAGGLGLNFVGANIVVLFDPTWNPANDLQAIDRAYRIGQ--------CRDVKVFRLISLGTVEEVIYLRQVYKQQLQSSVMGKESA---RRYFDAVQGSDDQKGELFGIQNLFR 683
BLAST of jgi.p|Trimin1|350326 vs. uniprot
Match: A0A1S3PFX1_SALSA (DNA excision repair protein ERCC-6-like 2 isoform X2 n=2 Tax=Salmoninae TaxID=504568 RepID=A0A1S3PFX1_SALSA) HSP 1 Score: 283 bits (723), Expect = 1.120e-76 Identity = 238/794 (29.97%), Postives = 340/794 (42.82%), Query Frame = 1
Query: 1078 EPLELA-GGATVPAAANRYLKSFQRETVQWLYERYHRQHGAIAALDMGLGKTVITVCFIAAILGKTGTRADRVALDARERAVRRAEAARLSNRTVVVSRAVVDQIRSK--SPVLVVVPASTRESWRRHFRDWGHFAVGLLPGGSKGGEALTWVRAGLYEVVITTYDTFKDAVKPEGAASPVKGYAPELLAPRALPACLKVSWTAAAVIGDMPADEHLTEVKWEAIFFDEYHLVKNPLSQRGMAAAEFRGQTLIYGLTGTPIQNNLKELWWLMDLAVPDCLGDRDMFKAHFDAPLRKGRMLSATKTDVELEARGTPLKRRQAELDAIVKRHMLILKKETELAEYLPARSMHIVFCNPTPLQQGLYRAMLDLPEFKLLATASTFMTRQVLLXXXXXXXXXXXXXXXXXXXARCAAAAATXXXXXXXXXXXXXXXXXXSQALPQQDCCRTKLXXXXXXXXXXXGQPCDCGRVHEQTGLPLERGKCCWTLPLEEDAYGRPTNAVDARAALWFAGHPNGLSCVRCPWCCLFPALSRLSKVANHPAALQYDVRWSADKKRQAATFLECLPEVLVERMGGLQ---RSQRFEDMSDASMSGXXXXXXXXXXXXXXXMVKALLHQFNAERKRTLLCSLSTQTLDVIEACVIGWGYERLRLDGATPLDQRQRIVDEFNRMPGAPVLLVSTRAGGIGLNINGASRVIIYDVNWNPSHDHQAQDRCYRIGQDKADKAVEDKAVEVYRLISCGTIEELIYMRQLYKVQLAGSALDSKAGGGGARHFNAMQGVRGEEGELFGVANLLR 3441
EPL L+ G VP NRYL+ +Q+E +Q++Y+ Y + G I DMGLGKT+ + F+AA+LGKTGT D + N + RSK L+V P S +W+ WG+F ++ G K E L ++ G E+ +TTY+T + CL E + W A+ DE H +KNP SQ A E R + GLTGT +QNNL ELW +MD A+P CLG FK F P+ G+ S TK R RR + A + + + + E LP + +V+C+ T QQ +Y+A+LD + LL +S + CDC Q+G R KCC+ + NA R + F L+ L KVANH A LQ +W+ KK++ ++ + E + ++ + FE MSD SG +++ LL + + + LL SLST+ LDV+E+ + G E RLDG T +R +IV EFN P + LVST AGG+GLN GA+ V+++D WNP++D QA DR YRIGQ + V V+RLIS GT+EE+IY+RQ+YK QL S + ++ R+F+A+QG ++GELFG+ NL R
Sbjct: 101 EPLVLSQSGVAVPYTINRYLRYYQKEGIQFIYDNYAQSRGCILGDDMGLGKTIQVIGFLAAVLGKTGTWED------------------IENNRPQFLHTQIPTQRSKPRKVFLIVAPLSVLYNWKEELETWGYFLTVVVHGLRKE-EELARIQRGRSEIALTTYETLR--------------------------LCL----------------EQFNSIDWSAVIVDEAHKIKNPNSQITGAMKELRCLVRV-GLTGTILQNNLDELWCVMDWAIPRCLGSLGNFKNMFSDPIELGQKHSVTK-------RALATGRRAVQALAGKLSQWFLRRTKALIREQLPKKDDRVVYCSLTSFQQTVYQAVLDTEDVTLLLRSS---------------------------------------------------------------------------------EKCDC-----QSGR--SRRKCCYKV-----------NARGVRVTDLY-----------------FSYLAILRKVANHVALLQS--KWNTSKKQEQ--YVNEICEKVFQKFPDFTEKCKQTAFEAMSDPMYSGKMK------------VLQRLLKHYVQRKDKVLLFSLSTKLLDVLESYCMADGLEYSRLDGNTKSRERLKIVKEFNSCPDINLCLVSTMAGGLGLNFVGANIVVLFDPTWNPANDLQAIDRAYRIGQ--------CRDVTVFRLISLGTVEEVIYLRQVYKQQLQSSVVGKESA---RRYFDAVQGSDDQKGELFGIQNLFR 682 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350326 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6850 ID=mRNA_6850|Name=jgi.p|Trimin1|350326|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4304bp|location=Sequence derived from alignment at Contig_60:698577..709455- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGAGGCCATGGAGTTAGAACAAGACTTCGAATACGTTCCGCCGCCACCback to top protein sequence of jgi.p|Trimin1|350326 >Trimin1|350326|estExt_Genemark1.C_Ctg_600105 ID=Trimin1|350326|estExt_Genemark1.C_Ctg_600105|Name=jgi.p|Trimin1|350326|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1348bp MEAMELEQDFEYVPPPPLAAPATHLKVAKLADLDVPELPAPVSRFKPELKback to top mRNA from alignment at Contig_60:698577..709455- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6850 ID=mRNA_6850|Name=jgi.p|Trimin1|350326|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10879bp|location=Sequence derived from alignment at Contig_60:698577..709455- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_60:698577..709455- >mRNA_6850 ID=mRNA_6850|Name=jgi.p|Trimin1|350326|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=4044bp|location=Sequence derived from alignment at Contig_60:698577..709455- (Tribonema minus UTEX_B_3156 )back to top |