Trimin1|350321|estExt_Genemark1.C_Ctg_600098 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350321
Unique NameTrimin1|350321|estExt_Genemark1.C_Ctg_600098
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length201
Homology
BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A835YN25_9STRA (Protein tyrosine phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN25_9STRA)

HSP 1 Score: 383 bits (984), Expect = 2.270e-134
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
Query:    1 MALAQVSSLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHKGGSLETERIWTVV 200
            MALAQVSSLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHKGGSLETERIWTVV
Sbjct:    1 MALAQVSSLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHKGGSLETERIWTVV 200          
BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A835ZE75_9STRA (Protein tyrosine phosphatase type IVA protein 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE75_9STRA)

HSP 1 Score: 234 bits (598), Expect = 8.320e-76
Identity = 129/187 (68.98%), Postives = 142/187 (75.94%), Query Frame = 0
Query:    1 MALAQVSSLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHK 187
            M L   +SLAT+PSL+EW N+KGRKLSFLIMDAPKAHNL +YLKECK+HNVV MVRVCE TYPA+EV RAGI M  MEY DG APP EII  WLDVVD T                XXXXXX    PT+AVHCVAGLGRAPVLVAIALIE+GM+   AVEYIR RRRGAINRKQL+YLE+Y   RH+
Sbjct:    1 MVLVHATSLATRPSLIEWANKKGRKLSFLIMDAPKAHNLQLYLKECKRHNVVSMVRVCEDTYPAEEVTRAGIDMHHMEYPDGDAPPQEIINQWLDVVDVT----------GXXXXXXXXXXXXXXXPTIAVHCVAGLGRAPVLVAIALIESGMDPIHAVEYIRERRRGAINRKQLTYLERYAPTRHR 177          
BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: D7FKQ1_ECTSI (Protein tyrosine phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKQ1_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 7.650e-62
Identity = 113/185 (61.08%), Postives = 131/185 (70.81%), Query Frame = 0
Query:    2 ALAQVSSLATK---PSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQR 183
            AL +V + AT    PSLVEW     +KL F+IMDAPKA+NL +Y++E KK NVV +VRVCE TYPA EVE AGI + EMEYDDG APP EII  WLDVV  TF +   S+  +   G           PT+AVHCVAGLGRAPVLVAIALIE G +  +AVEYIR RRRGAINRKQLSYL+ Y+R
Sbjct:   25 ALGRVEAAATMSAHPSLVEW-----KKLRFVIMDAPKANNLHLYIRELKKQNVVCVVRVCEPTYPASEVEAAGIKLLEMEYDDGGAPPVEIINKWLDVVQTTFHNAPDSSGPNGSEG-----------PTIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDSYER 193          
BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A6H5KJ35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ35_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 2.500e-60
Identity = 114/192 (59.38%), Postives = 133/192 (69.27%), Query Frame = 0
Query:    2 ALAQVSSLATK---PSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHKGGS 190
            AL +V   AT    PSLVEW     +KL F+IMDAPKA+NL +Y++E KK NVV +VRVCE TYPA EVE AG+ + EMEYDDG APP EII  WL+VV  TF +   S+  +   G           PT+AVHCVAGLGRAPVLVAIALIE G +  +AVEYIR RRRGAINRKQLSYL+ Y+R R  G S
Sbjct:   36 ALGRVEPAATMSAHPSLVEW-----KKLRFVIMDAPKANNLHLYIRELKKQNVVCVVRVCEPTYPASEVEAAGMKLLEMEYDDGGAPPVEIINKWLNVVKTTFHNAPDSSGPNGSEG-----------PTIAVHCVAGLGRAPVLVAIALIEYGKDPIKAVEYIRDRRRGAINRKQLSYLDSYER-RSSGNS 210          
BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A7S3GSY3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GSY3_9STRA)

HSP 1 Score: 177 bits (448), Expect = 3.140e-53
Identity = 96/186 (51.61%), Postives = 122/186 (65.59%), Query Frame = 0
Query:    3 LAQVSSLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHKG 188
            ++  +SL  KPSL+EW       L  LIMDAPK  NL +YLK+CKK NV  +VR+ E +Y  +EVE++GIA+ EM Y DG +PPP++I  WL V+  TF + GP                   TP +A+HCVAGLGRAPVLVAIALIE GM++  AV +IR RRRGAIN  QL+YLE Y+ +R KG
Sbjct:    1 MSSANSLVNKPSLIEW-----GPLRLLIMDAPKDSNLHLYLKQCKKSNVTSIVRISEPSYSREEVEKSGIALHEMYYPDGHSPPPDVIARWLTVLADTFDNKGPDE-----------------TPCIAIHCVAGLGRAPVLVAIALIEYGMDAISAVTFIRERRRGAINTVQLNYLESYKPMRKKG 164          
BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A7R9Y7Z4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y7Z4_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.210e-50
Identity = 101/183 (55.19%), Postives = 118/183 (64.48%), Query Frame = 0
Query:    8 SLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIE-NGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHKGG 189
            SLA +PSLVE  + +     FLI+DAPK H+LP YL ECKK+NVV +VRVC+ TY A+ VE AGI M EMEY DG  PP E+I  WLDVV+ TF +   +  D                P +AVHCVAGLGRAPVLVAIALIE   +E +EAV  IR +RRGAIN KQL YLE Y   R  G 
Sbjct:   14 SLAGRPSLVEVDDMR-----FLILDAPKEHDLPQYLLECKKNNVVHLVRVCQPTYNAEHVESAGIHMHEMEYADGSHPPQEVIDKWLDVVEQTFSAKAVAKADEK--------------PCIAVHCVAGLGRAPVLVAIALIEFAALEPTEAVTLIRKQRRGAINSKQLQYLESYVATRAGGA 177          
BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A7S1UGF3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGF3_9STRA)

HSP 1 Score: 167 bits (422), Expect = 3.840e-49
Identity = 99/184 (53.80%), Postives = 120/184 (65.22%), Query Frame = 0
Query:    8 SLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIE-NGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHKGGS 190
            +LA +PSLVE          FLI DAPK  NLP YL ECKK NV  +VRVC++TYP+ +VE AGI+M EMEY DG  PP +II  WLDVV+  F   GP    +  +        +G  P + VHCVAGLGRAPVLVAIAL+E  GM+  EAV  IR +RRGAIN KQL +LE+Y+  R  GG+
Sbjct:   12 TLAGRPSLVE-----SNGYRFLIFDAPKEENLPQYLLECKKQNVSHLVRVCQQTYPSSQVESAGISMHEMEYADGTNPPDDIIEKWLDVVEDCF---GPKPASAAAS--------DGAAPCLGVHCVAGLGRAPVLVAIALVEFTGMDPVEAVAMIRKQRRGAINSKQLFWLERYRPSR--GGT 177          
BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A485KIA3_9STRA (Aste57867_5759 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KIA3_9STRA)

HSP 1 Score: 163 bits (413), Expect = 6.690e-48
Identity = 93/178 (52.25%), Postives = 114/178 (64.04%), Query Frame = 0
Query:   12 KPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHKGG 189
            KPS V++      +LSFLI+DAP   NLP+Y+KE KK+ V  +VR CE TY    VE AG  + EME+ DG  P  EII  WLD+V+ TF+      N  ++AG            T+AVHCVAGLGRAPVLVAIALIENG++   AVE+IR  RRGAIN +QL YLE+YQ  R   G
Sbjct:    7 KPSHVQY-----EQLSFLILDAPNDTNLPLYVKEFKKYQVTDIVRACESTYSCTSVESAGFRLHEMEFPDGDPPSAEIINQWLDLVETTFKD-----NSKVNAGNNPNDK------TIAVHCVAGLGRAPVLVAIALIENGLDVINAVEHIRQSRRGAINLRQLKYLEKYQPTRKDKG 168          
BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: H3GU63_PHYRM (Uncharacterized protein n=24 Tax=Peronosporaceae TaxID=4777 RepID=H3GU63_PHYRM)

HSP 1 Score: 163 bits (412), Expect = 8.380e-48
Identity = 89/171 (52.05%), Postives = 114/171 (66.67%), Query Frame = 0
Query:   12 KPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRSGGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQYQ 182
            KP++V+W +     LSF+IMDAP   NL IYLKE KKHNV  +VR CE TY ++ VE AGI + E+E+ DG +P PEI+  WLD+V+  F+     A ++                ++AVHCVAGLGRAPVLVAIALIE G++   AVE+IR  RRGAIN +QL YLE+YQ
Sbjct:    7 KPTMVKWEH-----LSFVIMDAPNDSNLHIYLKELKKHNVTDLVRACEVTYSSESVEAAGIHVHELEFPDGESPDPEILDQWLDLVEECFKDNSIDAKNNK---------------SIAVHCVAGLGRAPVLVAIALIEYGLDPINAVEHIRKFRRGAINLRQLKYLEKYQ 157          
BLAST of jgi.p|Trimin1|350321 vs. uniprot
Match: A0A7S2XV81_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV81_9STRA)

HSP 1 Score: 162 bits (411), Expect = 9.260e-48
Identity = 93/169 (55.03%), Postives = 107/169 (63.31%), Query Frame = 0
Query:   16 VEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHNVVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDATFRS---GGPSANDSMHAGGXXXXXXEGGTPTVAVHCVAGLGRAPVLVAIALIENGMESSEAVEYIRARRRGAINRKQLSYLEQY 181
            VEW       L FLIMD P+ HNL +Y+KE K +NV  +VRVCEK Y A EVE+AGI M EME+DDG +PP  II  WL +VD TF+    G PS+                  P +AVHCVAGLGRAPVLVAIA IE G +    V+YIR RRRGAIN KQL YLE Y
Sbjct:    1 VEW-----GPLRFLIMDTPREHNLHLYIKEMKNNNVTDVVRVCEKAYSAAEVEKAGIRMHEMEFDDGDSPPGGIITDWLHLVDETFKGVKEGNPSS------------------PAIAVHCVAGLGRAPVLVAIACIERGADPLHIVKYIRNRRRGAINAKQLMYLENY 146          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350321 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YN25_9STRA2.270e-134100.00Protein tyrosine phosphatase n=1 Tax=Tribonema min... [more]
A0A835ZE75_9STRA8.320e-7668.98Protein tyrosine phosphatase type IVA protein 1 n=... [more]
D7FKQ1_ECTSI7.650e-6261.08Protein tyrosine phosphatase n=1 Tax=Ectocarpus si... [more]
A0A6H5KJ35_9PHAE2.500e-6059.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3GSY3_9STRA3.140e-5351.61Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7R9Y7Z4_9STRA1.210e-5055.19Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1UGF3_9STRA3.840e-4953.80Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A485KIA3_9STRA6.690e-4852.25Aste57867_5759 protein n=1 Tax=Aphanomyces stellat... [more]
H3GU63_PHYRM8.380e-4852.05Uncharacterized protein n=24 Tax=Peronosporaceae T... [more]
A0A7S2XV81_9STRA9.260e-4855.03Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003595Protein-tyrosine phosphatase, catalyticSMARTSM00404ptp_7coord: 76..190
e-value: 0.0023
score: 18.8
IPR029021Protein-tyrosine phosphatase-likeGENE3D3.90.190.10Protein tyrosine phosphatase superfamilycoord: 9..183
e-value: 1.8E-39
score: 137.3
IPR029021Protein-tyrosine phosphatase-likeSUPERFAMILY52799(Phosphotyrosine protein) phosphatases IIcoord: 28..184
NoneNo IPR availablePIRSRPIRSR037322-1PIRSR037322-1coord: 130..182
e-value: 0.0019
score: 15.5
NoneNo IPR availablePIRSRPIRSR620405-1PIRSR620405-1coord: 128..180
e-value: 3.0E-4
score: 18.0
NoneNo IPR availablePIRSRPIRSR038025-50PIRSR038025-50coord: 128..162
e-value: 0.012
score: 12.4
NoneNo IPR availablePIRSRPIRSR000941-50PIRSR000941-50coord: 128..185
e-value: 4.4E-4
score: 17.2
NoneNo IPR availablePANTHERPTHR23339:SF65PROTEIN TYROSINE PHOSPHATASE TYPE IVA 2coord: 25..183
NoneNo IPR availablePANTHERPTHR23339TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASEcoord: 25..183
NoneNo IPR availableCDDcd14500PTP-IVacoord: 12..188
e-value: 1.43952E-79
score: 232.496
IPR000387Tyrosine-specific protein phosphatases domainPROSITEPS50056TYR_PHOSPHATASE_2coord: 91..177
score: 15.90874

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_60contigContig_60:670805..671909 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350321mRNA_6842Tribonema minus UTEX_B_3156 mRNAContig_60 670320..673102 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350321|estExt_Genemark1.C_Ctg_600098 ID=Trimin1|350321|estExt_Genemark1.C_Ctg_600098|Name=jgi.p|Trimin1|350321|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=201bp
MALAQVSSLATKPSLVEWVNRKGRKLSFLIMDAPKAHNLPIYLKECKKHN
VVRMVRVCEKTYPADEVERAGIAMSEMEYDDGMAPPPEIIRSWLDVVDAT
FRSGGPSANDSMHAGGGGGGAGEGGTPTVAVHCVAGLGRAPVLVAIALIE
NGMESSEAVEYIRARRRGAINRKQLSYLEQYQRIRHKGGSLETERIWTVV
*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003595Tyr_Pase_cat
IPR029021Prot-tyrosine_phosphatase-like
IPR000387Tyr_Pase_dom