Trimin1|350293|estExt_Genemark1.C_Ctg_600064 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|350293
Unique Name	Trimin1\|350293\|estExt_Genemark1.C_Ctg_600064
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	890

Homology

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BLAST of jgi.p|Trimin1|350293 vs. uniprot
Match: A0A836C9U6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9U6_9STRA)

HSP 1 Score: 1325 bits (3428), Expect = 0.000e+0
Identity = 889/889 (100.00%), Postives = 889/889 (100.00%), Query Frame = 0

Query:    1 MQHEHLQQQLQLQXXXXXXXXXXXXXXXXXXXXXXXXXXWEAAPLPAHTYEGAMQXXXXXXXXAPPARTFSPMPLRRQLDSQDSIPALQLPAAQEPAQAWRPFAGAAPDASSALHAAAPQSGAAAGSGDAGADDALRARVAELEAQLAAQARQLAQTRSELLRAEEEKDDLLASAAVVEVESKLAVDQELKRLASELNFKEHALGEAQKEGARARRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPALGAADALRLAHVPFAEVLVAERGVELMQLLGADPTLPPAYERGAAXXXXXXXXXXRRAICTPGPTPLRPPLGSAAAVXXXXXXXXXXXXAEFAVTPLPRAHCTQSSSATGNTVSPAASAGAASXXXXXXXXRRGAFGALRRQLFECLRDAWAGRAGPGELLAVLVGFVEAAGGGSELSEQDVARYSHTLVSAVRLMQATLALSHQLRAALRPTSAPDDDAQAPCRPLCTISDATGGPLAGAQMDGHLAAMLSNDPHTVAAVGSSSERGLQRQRGLAARLRRCLMHAFVGGVGAQEGALVTAAMQAILTCTAELEPAELAATWSALLSDDAFHTILCTKFGTTAMKELALDLLRCLFRSRDLFLQIATGNDAHATPAAQVQDGAGGAAVAPGXXXXXXXXXXXXXXGQGGRPSLLRQLCAQLFTMESALPGDASLYGLYTRAVRLLSQVCACHGSVATSHLLEDNDGGPSSDAVLRVRLIPKLINFISYGGGVVQVQQQRSTTLHRTTAPVTSAGDGPPARLHEPGRRPLQQQRTRWPGTDGSGKGHAADRESSRGALPLSEQQCRVYKDGVKVLKADGSYLSSSAQHMCPYPFLQC 889
            MQHEHLQQQLQLQXXXXXXXXXXXXXXXXXXXXXXXXXXWEAAPLPAHTYEGAMQXXXXXXXXAPPARTFSPMPLRRQLDSQDSIPALQLPAAQEPAQAWRPFAGAAPDASSALHAAAPQSGAAAGSGDAGADDALRARVAELEAQLAAQARQLAQTRSELLRAEEEKDDLLASAAVVEVESKLAVDQELKRLASELNFKEHALGEAQKEGARARRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPALGAADALRLAHVPFAEVLVAERGVELMQLLGADPTLPPAYERGAAXXXXXXXXXXRRAICTPGPTPLRPPLGSAAAVXXXXXXXXXXXXAEFAVTPLPRAHCTQSSSATGNTVSPAASAGAASXXXXXXXXRRGAFGALRRQLFECLRDAWAGRAGPGELLAVLVGFVEAAGGGSELSEQDVARYSHTLVSAVRLMQATLALSHQLRAALRPTSAPDDDAQAPCRPLCTISDATGGPLAGAQMDGHLAAMLSNDPHTVAAVGSSSERGLQRQRGLAARLRRCLMHAFVGGVGAQEGALVTAAMQAILTCTAELEPAELAATWSALLSDDAFHTILCTKFGTTAMKELALDLLRCLFRSRDLFLQIATGNDAHATPAAQVQDGAGGAAVAPGXXXXXXXXXXXXXXGQGGRPSLLRQLCAQLFTMESALPGDASLYGLYTRAVRLLSQVCACHGSVATSHLLEDNDGGPSSDAVLRVRLIPKLINFISYGGGVVQVQQQRSTTLHRTTAPVTSAGDGPPARLHEPGRRPLQQQRTRWPGTDGSGKGHAADRESSRGALPLSEQQCRVYKDGVKVLKADGSYLSSSAQHMCPYPFLQC
Sbjct:    1 MQHEHLQQQLQLQXXXXXXXXXXXXXXXXXXXXXXXXXXWEAAPLPAHTYEGAMQXXXXXXXXAPPARTFSPMPLRRQLDSQDSIPALQLPAAQEPAQAWRPFAGAAPDASSALHAAAPQSGAAAGSGDAGADDALRARVAELEAQLAAQARQLAQTRSELLRAEEEKDDLLASAAVVEVESKLAVDQELKRLASELNFKEHALGEAQKEGARARRELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPALGAADALRLAHVPFAEVLVAERGVELMQLLGADPTLPPAYERGAAXXXXXXXXXXRRAICTPGPTPLRPPLGSAAAVXXXXXXXXXXXXAEFAVTPLPRAHCTQSSSATGNTVSPAASAGAASXXXXXXXXRRGAFGALRRQLFECLRDAWAGRAGPGELLAVLVGFVEAAGGGSELSEQDVARYSHTLVSAVRLMQATLALSHQLRAALRPTSAPDDDAQAPCRPLCTISDATGGPLAGAQMDGHLAAMLSNDPHTVAAVGSSSERGLQRQRGLAARLRRCLMHAFVGGVGAQEGALVTAAMQAILTCTAELEPAELAATWSALLSDDAFHTILCTKFGTTAMKELALDLLRCLFRSRDLFLQIATGNDAHATPAAQVQDGAGGAAVAPGXXXXXXXXXXXXXXGQGGRPSLLRQLCAQLFTMESALPGDASLYGLYTRAVRLLSQVCACHGSVATSHLLEDNDGGPSSDAVLRVRLIPKLINFISYGGGVVQVQQQRSTTLHRTTAPVTSAGDGPPARLHEPGRRPLQQQRTRWPGTDGSGKGHAADRESSRGALPLSEQQCRVYKDGVKVLKADGSYLSSSAQHMCPYPFLQC 889

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350293 vs. uniprot

BLAST of jgi.p|Trimin1|350293 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836C9U6_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 190..243
None	No IPR available	COILS	Coil	Coil	coord: 133..181
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 248..275
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 676..699
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 792..853
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	SUPERFAMILY	81995	beta-sandwich domain of Sec23/24	coord: 5..78

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_60	contig	Contig_60:430959..440809 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350293	mRNA_6806	Tribonema minus UTEX_B_3156	mRNA	Contig_60 430959..440862 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|350293|estExt_Genemark1.C_Ctg_600064 ID=Trimin1|350293|estExt_Genemark1.C_Ctg_600064|Name=jgi.p|Trimin1|350293|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=890bp
MQHEHLQQQLQLQQPPLPQQQQQQDQWQEQQPPPPQQQQWEAAPLPAHTY
EGAMQQEQQQQQPAPPARTFSPMPLRRQLDSQDSIPALQLPAAQEPAQAW
RPFAGAAPDASSALHAAAPQSGAAAGSGDAGADDALRARVAELEAQLAAQ
ARQLAQTRSELLRAEEEKDDLLASAAVVEVESKLAVDQELKRLASELNFK
EHALGEAQKEGARARRELEAQQAQLVQVQAQAEAQAVERLKRERAQSTAA
AAAAADLHSADAPSPKRPRVSASGSSSSHALAAAAAAAPAAPALGAADAL
RLAHVPFAEVLVAERGVELMQLLGADPTLPPAYERGAAAAAAATPAAARR
AICTPGPTPLRPPLGSAAAVPAAAAAAATAAAAEFAVTPLPRAHCTQSSS
ATGNTVSPAASAGAASAAGTAAAARRGAFGALRRQLFECLRDAWAGRAGP
GELLAVLVGFVEAAGGGSELSEQDVARYSHTLVSAVRLMQATLALSHQLR
AALRPTSAPDDDAQAPCRPLCTISDATGGPLAGAQMDGHLAAMLSNDPHT
VAAVGSSSERGLQRQRGLAARLRRCLMHAFVGGVGAQEGALVTAAMQAIL
TCTAELEPAELAATWSALLSDDAFHTILCTKFGTTAMKELALDLLRCLFR
SRDLFLQIATGNDAHATPAAQVQDGAGGAAVAPGTPAAREEAGGGGVGGQ
GGRPSLLRQLCAQLFTMESALPGDASLYGLYTRAVRLLSQVCACHGSVAT
SHLLEDNDGGPSSDAVLRVRLIPKLINFISYGGGVVQVQQQRSTTLHRTT
APVTSAGDGPPARLHEPGRRPLQQQRTRWPGTDGSGKGHAADRESSRGAL
PLSEQQCRVYKDGVKVLKADGSYLSSSAQHMCPYPFLQC*