mRNA_6852 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|168858
Unique NamemRNA_6852
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|168858 vs. uniprot
Match: A0A836CBT9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBT9_9STRA)

HSP 1 Score: 407 bits (1046), Expect = 8.630e-144
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 1 
Query:    1 MAGEGEVLPLLAVSHTERHCCLARGWRTYHGLLLEHPLLTKSVTASLMAATGEFVGSYLKKSGPGTPRERARRLGAFAVFGLVVNGPAFHFWYAFLEQLAQRWSKLTGGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQACALVYKSALLLNWKLWTVAQVINFNFVPLEYRVLFGNLVAAVWCAILSLLG 603
            MAGEGEVLPLLAVSHTERHCCLARGWRTYHGLLLEHPLLTKSVTASLMAATGEFVGSYLKKSGPGTPRERARRLGAFAVFGLVVNGPAFHFWYAFLEQLAQRWSKLTGGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQACALVYKSALLLNWKLWTVAQVINFNFVPLEYRVLFGNLVAAVWCAILSLLG
Sbjct:    1 MAGEGEVLPLLAVSHTERHCCLARGWRTYHGLLLEHPLLTKSVTASLMAATGEFVGSYLKKSGPGTPRERARRLGAFAVFGLVVNGPAFHFWYAFLEQLAQRWSKLTGGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQACALVYKSALLLNWKLWTVAQVINFNFVPLEYRVLFGNLVAAVWCAILSLLG 201
[Close]
BLAST of jgi.p|Trimin1|168858 vs. uniprot
Match: A0A836CQ06_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ06_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.330e-58
Identity = 88/144 (61.11%), Postives = 113/144 (78.47%), Query Frame = 1 
Query:   61 CLARGWRTYHGLLLEHPLLTKSVTASLMAATGEFVGSYLKKSGPGTPRERARRLGAFAVFGLVVNGPAFHFWYAFLEQLAQRWSKLTGGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQACALVYKSALLLNWK 492
            C+ + W+ Y  LL+  PL TK++TA+ M A GE +G+ L+K+GPGT RER +RL AF VFGLVVNGP FHFWY  LE++A++WSKL+GG  +ILFK+++DRLL+TPPYL LTLVGLRWLQD +L  A+QA   +YK ALL NWK
Sbjct:   27 CIVQYWKGYQALLITDPLKTKAITAACMGAIGELIGAQLRKAGPGTQRERLKRLWAFTVFGLVVNGPVFHFWYGTLEKIARKWSKLSGGRQVILFKILLDRLLLTPPYLALTLVGLRWLQDCRLGAAVQASRGIYKQALLTNWK 170
[Close]
BLAST of jgi.p|Trimin1|168858 vs. uniprot
Match: D7FXU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXU0_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 1.010e-43
Identity = 91/206 (44.17%), Postives = 113/206 (54.85%), Query Frame = 1 
Query:   64 LARGWRTYHGLLLEHPLLTKSVTASLMAATGEFVGSYLKKSGPGTPRERA------------------------RRLGAFAVFGLVVNGPAFHFWYAFLEQLAQRWSKL---TGGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQACALVYKSALLLNWKLWTVAQVINFNFVPLEYRVLFGNLVAAVWCAILSLL 600
            L+  W  Y   + E PLLTKSVT++L++A GE +GS L+ S P                               RR  AFA+FGL+VNGP FH+WY  LE  A R  K     GG   I FKV VDR LMTPPYL +TL  LR LQ      ++   + +Y+  L  NWK+WT AQ++NF  VP+EYR +FGNLVA  W   LSLL
Sbjct:   42 LSSPWALYKRSMSERPLLTKSVTSALVSALGELMGSALRSSPPXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLLRRTAAFAIFGLLVNGPVFHWWYGALEGAAARRRKAGEPPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIGETSALYRGVLFTNWKIWTAAQLLNFKLVPIEYRPVFGNLVAFWWNIYLSLL 247
[Close]
BLAST of jgi.p|Trimin1|168858 vs. uniprot
Match: A0A485LPX3_9STRA (Aste57867_24163 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LPX3_9STRA)

HSP 1 Score: 125 bits (314), Expect = 7.300e-33
Identity = 72/174 (41.38%), Postives = 99/174 (56.90%), Query Frame = 1 
Query:   76 WRTYHGLLLEHPLLTKSVTASLMAATGEFVGSYLKKSGPGTPRERARRLGAFAVFGLVVNGPAFHFWYAFLEQLAQRWSKLTGGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQACALVYKSALLLNWKLWTVAQVINFNFVPLEYRVLFGNLVAAVWCAILSL 597
            W  Y   L E PL TK+ T++ M   GE +   LKK    T     RR+ AF ++G VV GP  H+WY FLE++    +KLT        K+++DRLL+TPP++ LT++ L  L       A      VY + LL+NWK+WT  Q ++FN+VP  +RVL+GN VA  W   LSL
Sbjct:   12 WAKYQDELREKPLQTKAATSAAMGVCGEVLAHTLKKKPIYTVS--FRRMLAFGLYGGVVTGPIMHYWYGFLERMRSGGNKLTPTQ-----KLLMDRLLLTPPFVALTILMLGVLNGASATAARANLRAVYWTTLLMNWKVWTFTQWLSFNYVPPHFRVLWGNAVAVWWNCYLSL 178
[Close]
BLAST of jgi.p|Trimin1|168858 vs. uniprot
Match: W7TTQ5_9STRA (Peroxisomal membrane protein 2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTQ5_9STRA)

HSP 1 Score: 124 bits (312), Expect = 7.520e-32
Identity = 77/180 (42.78%), Postives = 107/180 (59.44%), Query Frame = 1 
Query:   64 LARGWRTYHGLLLEHPLLTKSVTASLMAATGEFVGSYLKKSGPGTPRERARRLGAFAVFGLVVNGPAFHFWYAFLEQLAQRWSKLTGGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQACALVYKSALLLNWKLWTVAQVINFNFVPLEYRVLFGNLVAAVWCAILSLLG 603
            L R  R YH  L+  P+LTK++T+++++A G+ + S    SG G      RR   F +FG +V GP  H+WY  LE+  +    L GG ++ + KV++D+LL TPP+L LTL  LR L+  +   A +    VY   L  N ++WTVAQ INF++V   YRVLFGNLVA  W   LS LG
Sbjct:   54 LKRLLRAYHHCLVTRPVLTKALTSAVISALGDILAS----SGKGGRGRSGRRTLGFFLFGGLVTGPLCHYWYGLLEKKVRG---LQGGKNVAM-KVLLDKLLFTPPFLALTLFLLRLLESGRPGAAWRGMKQVYFPTLKTNLQVWTVAQAINFSYVSPAYRVLFGNLVALWWSFYLSRLG 225
[Close]
BLAST of jgi.p|Trimin1|168858 vs. uniprot
Match: A0A5D6Y4Q1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y4Q1_9STRA)

HSP 1 Score: 118 bits (295), Expect = 4.380e-30
Identity = 69/179 (38.55%), Postives = 105/179 (58.66%), Query Frame = 1 
Query:   64 LARGWRTYHGLLLEHPLLTKSVTASLMAATGEFVGSYLKKSGPGTPRERA-RRLGAFAVFGLVVNGPAFHFWYAFLEQLAQRWSKLTGGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQACALVYKSALLLNWKLWTVAQVINFNFVPLEYRVLFGNLVAAVWCAILSL 597
            +A  W+ Y   L ++P+ TK++T++ +A  GE +G +LK     T R  + R++ AF  FG VV GP  H+WY  LE      SKLT        K+++DRL+ TPP+  LT+  L  ++   +  +      V+  ALL+NW++WTV Q ++F++VP + RVL+GN VA  W A LSL
Sbjct:    1 MATAWQEYQVALKKNPVRTKALTSASVAMLGEVLGHFLKHK---TLRGLSLRQMLAFFTFGGVVTGPLLHYWYGLLENQRFTKSKLTPNQ-----KLLLDRLVYTPPFTALTIFSLGVMRGSSVEASKANLRRVFVGALLMNWRVWTVTQWLSFHYVPSQLRVLWGNAVALWWNAYLSL 171
[Close]
BLAST of jgi.p|Trimin1|168858 vs. uniprot
Match: A0A6G0XN93_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XN93_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.540e-29
Identity = 68/173 (39.31%), Postives = 94/173 (54.34%), Query Frame = 1 
Query:   85 YHGLLLEHPLLTKSVTASLMAATGEFVGSYLKKSGPGTPRERARRLGAFAVFGLVVNGPAFHFWYAFLEQLAQRWSKLTGGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQACALVYKSALLLNWKLWTVAQVINFNFVPLEYRVLFGNLVAAVWCAILSLLG 603
            Y   L E PL TK++T++ M   GE +   LKK    T     RR+ AF VFG  + GP  HFWY  LEQ+  R  K          K+ +DRL++TPP++ LT+  L  L    +  A       Y S L +NW++WT  Q ++FNF+P ++RVL+GN VA  W   LS+L 
Sbjct:   15 YQKELKERPLRTKALTSASMGICGEILAHVLKKKPIYTVS--LRRVLAFGVFGGAITGPLMHFWYGVLEQVRTRDDKSLTPMQ----KLFLDRLVLTPPFVALTIFALGVLNGASVQAARSNVRATYFSTLFMNWRVWTFTQWLSFNFIPPQFRVLWGNAVAVWWNCYLSMLS 181
[Close]
BLAST of jgi.p|Trimin1|168858 vs. uniprot
Match: A0A7R9YBL3_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBL3_9STRA)

HSP 1 Score: 115 bits (289), Expect = 4.440e-29
Identity = 68/171 (39.77%), Postives = 103/171 (60.23%), Query Frame = 1 
Query:   85 YHGLLLEHPLLTKSVTASLMAATGEFVGSYLKKSGPGTPRERARRLGAFAVFGLVVNGPAFHFWYAFLEQLAQRWSKLTGGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQACALVYKSALLLNWKLWTVAQVINFNFVPLEYRVLFGNLVAAVWCAILSL 597
            Y   L + PL TKS++++++AA GE + S LK+      R  ARRL  F  +G +  GP  H+WYA LE+  +R+   T G   +L +++ DRL+M PP+L+ ++  L+ L    +    +A    + S    + KLWT AQ++NF  VP+EYRVLFGNLVA +W A L++
Sbjct:   17 YKSQLRKRPLTTKSLSSAVIAALGELLSSALKRQ-----RLSARRLLIFFAYGGLFVGPIMHWWYALLERHCRRYGAGTYG---LLLRLLGDRLIMAPPFLLGSIFFLQTLLSGSVRGGAKAAREQFASVFSSSIKLWTPAQLVNFKLVPIEYRVLFGNLVAILWNAFLAM 179
[Close]
BLAST of jgi.p|Trimin1|168858 vs. uniprot
Match: A0A6H5L3A8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3A8_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.670e-28
Identity = 74/170 (43.53%), Postives = 92/170 (54.12%), Query Frame = 1 
Query:   64 LARGWRTYHGLLLEHPLLTKSVTASLMAATGEFVGSYLKKSGP-------GTP---RERA--------------RRLGAFAVFGLVVNGPAFHFWYAFLEQLAQRWSK---LTGGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQACALVYKSALLLNWK 492
            L+  W  Y   + E PLLTKSVT++L++A GE  GS L+ S P       GT    + RA              RR  AFA+FGL+VNGP FH+WY  LE+ A R  K   L GG   I FKV VDR LMTPPYL +TL  LR LQ      ++   + +Y+  L  NWK
Sbjct:   36 LSSPWALYERSMSERPLLTKSVTSALVSALGELAGSALRSSSPPPLPVGAGTALAVKGRAGAGQRTGTAAPGLLRRTAAFAIFGLLVNGPVFHWWYGALERAAARRRKAGELPGGAGDITFKVAVDRFLMTPPYLAITLASLRLLQGLGAKRSIDETSALYRGVLFTNWK 205
[Close]
BLAST of jgi.p|Trimin1|168858 vs. uniprot
Match: A0A067D856_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067D856_SAPPC)

HSP 1 Score: 112 bits (280), Expect = 7.730e-28
Identity = 65/163 (39.88%), Postives = 93/163 (57.06%), Query Frame = 1 
Query:   85 YHGLLLEHPLLTKSVTASLMAATGEFVGSYLK-KSGPGTPRERARRLGAFAVFGLVVNGPAFHFWYAFLEQLAQRWSKLTGGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQACALVYKSALLLNWKLWTVAQVINFNFVPLEYRVLFGNLVA 570
            Y   LL+ PL TK++T+++M A+GE V   LK KS  G   +R      FA++   +  P  H WY FLEQ   R  +L+        K+++DRLL+TPP+L LTL  L  L    +  +       Y +AL +NWK+WT+ Q ++FN+VP   RVL+GN VA
Sbjct:   14 YQAALLKRPLQTKAITSAVMGASGEIVAHGLKYKSLQGLSLQRVL---VFALYSGGITAPVMHAWYGFLEQCRVRGDRLSNNG-----KLLLDRLLLTPPFLALTLFALSLLTGASVAASKALVRSKYVTALWMNWKVWTLTQYLSFNYVPPHLRVLWGNAVA 168
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168858 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CBT9_9STRA8.630e-144100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CQ06_9STRA1.330e-5861.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FXU0_ECTSI1.010e-4344.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A485LPX3_9STRA7.300e-3341.38Aste57867_24163 protein n=1 Tax=Aphanomyces stella... [more]
W7TTQ5_9STRA7.520e-3242.78Peroxisomal membrane protein 2 n=3 Tax=Monodopsida... [more]
A0A5D6Y4Q1_9STRA4.380e-3038.55Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6G0XN93_9STRA1.540e-2939.31Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A7R9YBL3_9STRA4.440e-2939.77Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6H5L3A8_9PHAE1.670e-2843.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A067D856_SAPPC7.730e-2839.88Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_60contigContig_60:715909..716514 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|168858|e_gw1.60.16.1
BRITEko00000,ko00001
KEGG Pathwayko04146,map04146
KEGG koko:K13347
GOsGO:0003674,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005778,GO:0005779,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0015267,GO:0015711,GO:0015849,GO:0016020,GO:0016021,GO:0022803,GO:0022857,GO:0031090,GO:0031224,GO:0031231,GO:0031300,GO:0031301,GO:0031903,GO:0032991,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0046942,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0098588,GO:0098805
Preferred namePXMP2
DescriptionBelongs to the peroxisomal membrane protein PXMP2 4 family
COG categoryC
Max annot lvl2759|Eukaryota
EggNOG OGsKOG1944@1|root,KOG1944@2759|Eukaryota
Evalue1.66e-44
Seed ortholog2880.D7FXU0
Hectar predicted targeting categoryother localisation
TranscriptId169180
TrackFilteredModels1
ProteinId168858
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168858gene_6852Tribonema minus UTEX_B_3156 geneContig_60 715909..716514 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_6852_1exon_6852_1Tribonema minus UTEX_B_3156 exonContig_60 715909..716514 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_6852CDS_6852Tribonema minus UTEX_B_3156 CDSContig_60 715909..716514 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168858Trimin1|168858|e_gw1.60.16.1Tribonema minus UTEX_B_3156 polypeptideContig_60 715909..716514 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_6852 ID=mRNA_6852|Name=jgi.p|Trimin1|168858|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=606bp|location=Sequence derived from alignment at Contig_60:715909..716514+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTGGTGAGGGCGAGGTGCTGCCATTGCTGGCTGTGAGCCACACAGA
ACGCCACTGTTGCCTGGCAAGGGGCTGGCGGACATACCACGGACTGTTAC
TGGAACATCCTTTGCTTACCAAGTCCGTGACAGCCTCGCTCATGGCGGCG
ACTGGGGAGTTCGTCGGGAGCTACTTGAAGAAATCGGGGCCTGGAACACC
GCGAGAGCGCGCACGGCGGCTAGGAGCGTTTGCCGTCTTCGGATTGGTGG
TCAATGGGCCCGCCTTCCACTTTTGGTACGCTTTTTTGGAGCAGCTGGCG
CAGCGGTGGTCGAAGCTGACAGGCGGGCACCATATCATATTGTTCAAAGT
CATCGTTGACAGACTGTTGATGACGCCGCCTTATCTAGTGCTAACGCTGG
TAGGGCTGCGTTGGCTACAGGATTTCAAGCTGCTGCTGGCGCTGCAGGCA
TGCGCGCTGGTGTACAAAAGTGCACTGCTTCTAAACTGGAAGCTTTGGAC
GGTGGCACAAGTCATCAATTTCAATTTTGTGCCGTTAGAATACAGGGTAC
TCTTCGGCAACTTAGTAGCTGCAGTGTGGTGCGCGATTTTGAGCCTGCTT
GGCTAG
back to top

protein sequence of jgi.p|Trimin1|168858

>Trimin1|168858|e_gw1.60.16.1 ID=Trimin1|168858|e_gw1.60.16.1|Name=jgi.p|Trimin1|168858|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=202bp
MAGEGEVLPLLAVSHTERHCCLARGWRTYHGLLLEHPLLTKSVTASLMAA
TGEFVGSYLKKSGPGTPRERARRLGAFAVFGLVVNGPAFHFWYAFLEQLA
QRWSKLTGGHHIILFKVIVDRLLMTPPYLVLTLVGLRWLQDFKLLLALQA
CALVYKSALLLNWKLWTVAQVINFNFVPLEYRVLFGNLVAAVWCAILSLL
G*
back to top

mRNA from alignment at Contig_60:715909..716514+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6852 ID=mRNA_6852|Name=jgi.p|Trimin1|168858|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=606bp|location=Sequence derived from alignment at Contig_60:715909..716514+ (Tribonema minus UTEX_B_3156 )
ATGGCTGGTGAGGGCGAGGTGCTGCCATTGCTGGCTGTGAGCCACACAGA
ACGCCACTGTTGCCTGGCAAGGGGCTGGCGGACATACCACGGACTGTTAC
TGGAACATCCTTTGCTTACCAAGTCCGTGACAGCCTCGCTCATGGCGGCG
ACTGGGGAGTTCGTCGGGAGCTACTTGAAGAAATCGGGGCCTGGAACACC
GCGAGAGCGCGCACGGCGGCTAGGAGCGTTTGCCGTCTTCGGATTGGTGG
TCAATGGGCCCGCCTTCCACTTTTGGTACGCTTTTTTGGAGCAGCTGGCG
CAGCGGTGGTCGAAGCTGACAGGCGGGCACCATATCATATTGTTCAAAGT
CATCGTTGACAGACTGTTGATGACGCCGCCTTATCTAGTGCTAACGCTGG
TAGGGCTGCGTTGGCTACAGGATTTCAAGCTGCTGCTGGCGCTGCAGGCA
TGCGCGCTGGTGTACAAAAGTGCACTGCTTCTAAACTGGAAGCTTTGGAC
GGTGGCACAAGTCATCAATTTCAATTTTGTGCCGTTAGAATACAGGGTAC
TCTTCGGCAACTTAGTAGCTGCAGTGTGGTGCGCGATTTTGAGCCTGCTT
GGCTAG
back to top

Coding sequence (CDS) from alignment at Contig_60:715909..716514+

>mRNA_6852 ID=mRNA_6852|Name=jgi.p|Trimin1|168858|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=606bp|location=Sequence derived from alignment at Contig_60:715909..716514+ (Tribonema minus UTEX_B_3156 )
ATGGCTGGTGAGGGCGAGGTGCTGCCATTGCTGGCTGTGAGCCACACAGA
ACGCCACTGTTGCCTGGCAAGGGGCTGGCGGACATACCACGGACTGTTAC
TGGAACATCCTTTGCTTACCAAGTCCGTGACAGCCTCGCTCATGGCGGCG
ACTGGGGAGTTCGTCGGGAGCTACTTGAAGAAATCGGGGCCTGGAACACC
GCGAGAGCGCGCACGGCGGCTAGGAGCGTTTGCCGTCTTCGGATTGGTGG
TCAATGGGCCCGCCTTCCACTTTTGGTACGCTTTTTTGGAGCAGCTGGCG
CAGCGGTGGTCGAAGCTGACAGGCGGGCACCATATCATATTGTTCAAAGT
CATCGTTGACAGACTGTTGATGACGCCGCCTTATCTAGTGCTAACGCTGG
TAGGGCTGCGTTGGCTACAGGATTTCAAGCTGCTGCTGGCGCTGCAGGCA
TGCGCGCTGGTGTACAAAAGTGCACTGCTTCTAAACTGGAAGCTTTGGAC
GGTGGCACAAGTCATCAATTTCAATTTTGTGCCGTTAGAATACAGGGTAC
TCTTCGGCAACTTAGTAGCTGCAGTGTGGTGCGCGATTTTGAGCCTGCTT
GGCTAG
back to top