mRNA_6735 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|168680 vs. uniprot
Match: A0A835YMT5_9STRA (NUDIX hydrolase domain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMT5_9STRA) HSP 1 Score: 330 bits (847), Expect = 6.720e-115 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1
Query: 1 MSTDEPCVLCHCCIQGELLMQRRSKFKDTYPGMWDVSVGGHMTAGDDSLLTAKKETAEELGINFNDTDLEFLFTIATSAQGSTERHGNFNCNEYKDVYMLRYNGGLAEIHFSEGEVEEVRWEPYDQVEQRLTSNDAAYIPRPTDYVTGLFTAVRDRL 471
MSTDEPCVLCHCCIQGELLMQRRSKFKDTYPGMWDVSVGGHMTAGDDSLLTAKKETAEELGINFNDTDLEFLFTIATSAQGSTERHGNFNCNEYKDVYMLRYNGGLAEIHFSEGEVEEVRWEPYDQVEQRLTSNDAAYIPRPTDYVTGLFTAVRDRL
Sbjct: 1 MSTDEPCVLCHCCIQGELLMQRRSKFKDTYPGMWDVSVGGHMTAGDDSLLTAKKETAEELGINFNDTDLEFLFTIATSAQGSTERHGNFNCNEYKDVYMLRYNGGLAEIHFSEGEVEEVRWEPYDQVEQRLTSNDAAYIPRPTDYVTGLFTAVRDRL 157
BLAST of jgi.p|Trimin1|168680 vs. uniprot
Match: D7G0X4_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X4_ECTSI) HSP 1 Score: 167 bits (422), Expect = 6.440e-50 Identity = 76/143 (53.15%), Postives = 108/143 (75.52%), Query Frame = 1
Query: 43 QGELLMQRRSKFKDTYPGMWDVSVGGHMTAGDDSLLTAKKETAEELGINFNDTDLEFLFTIATSAQGSTERHGNFNCNEYKDVYMLRYNGGLAEIHFSEGEVEEVRWEPYDQVEQRLTSNDAAYIPRPTDYVTGLFTAVRDRL 471
QGEL++Q+RS KDT+PGMWDVSVGGH TAG++SL TA KET EELG++ +++ L F+ T+AT+A+GST+ HG+F CNEYKD+Y+LR++G + ++ FS EVE+V+ P +++ + D YIPRP YV LF A+ + L
Sbjct: 33 QGELVLQKRSSSKDTFPGMWDVSVGGHFTAGEESLETAIKETDEELGLSCDESSLRFVCTVATTAKGSTDMHGDFVCNEYKDIYLLRHDGPVQDLKFSPSEVEDVKLVPMQALKEAYEAQDPTYIPRPDYYVEPLFKALEEAL 175
BLAST of jgi.p|Trimin1|168680 vs. uniprot
Match: A0A7S0XXS4_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0XXS4_HEMAN) HSP 1 Score: 151 bits (381), Expect = 3.650e-42 Identity = 68/150 (45.33%), Postives = 106/150 (70.67%), Query Frame = 1
Query: 43 QGELLMQRRSKFKDTYPGMWDVSVGGHMTAGDDSLLTAKKETAEELGINFNDTDLEFLFTIATSAQGSTERHGNFNCNEYKDVYMLRYNGGLAEIHFSEGEVEEVRWEPYDQVEQRLTSN--------DAAYIPRPTDYVTGLFTAVRDR 468
QGE ++Q+RS+ KDT+PG WDVSVGGH+T+GD + T KET EELG+ + +LE L T+ATS +G++ + G+F CNE+KD+++L+Y+G L ++F++ EV +V+ P+ +VE+ + + D AY+PRP Y+ LF A+R+R
Sbjct: 146 QGEFVLQQRSEKKDTFPGKWDVSVGGHVTSGDSVMHTVLKETQEELGVEVTEAELERLPTVATSLKGNSPKQGDFTCNEFKDIFLLKYSGTLEGLNFADNEVSDVKLVPWQEVEKDMLAQVSPDGEPTDGAYVPRPMSYIDILFDAMRER 295
BLAST of jgi.p|Trimin1|168680 vs. uniprot
Match: A0A7S4UN69_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4UN69_9DINO) HSP 1 Score: 142 bits (358), Expect = 4.020e-39 Identity = 74/144 (51.39%), Postives = 96/144 (66.67%), Query Frame = 1
Query: 43 QGELLMQRRSKFKDTYPGMWDVSVGGHMTAGDDSLLTAKKETAEELGINFNDTDLEFLFTIATSAQGSTERHGNFNCNEYKDVYMLRYNGGLAEIHFS--EGEVEEVRWEPYDQVEQRLTSNDAAYIPRPTDYVTGLFTAVRDR 468
+G+LL+QRRSK KDT+PG WDVS GH+ AGD L TA +E EELG+ + L+ LFTIA SA G+TERHG F CNEY++VY+LR G A +S EGEV E+R EP + E+ L + A Y+PR +Y+ L A+ R
Sbjct: 113 EGDLLLQRRSKHKDTHPGCWDVSCAGHIGAGDAGLETAVRELEEELGLAVPLSALKHLFTIAASASGATERHGPFRCNEYQEVYLLRVFGAHASRGYSPAEGEVAELRSEPIAETERSLRTGAADYVPRSREYIDALVGALLPR 256
BLAST of jgi.p|Trimin1|168680 vs. uniprot
Match: A0A7S0NEA1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NEA1_9CRYP) HSP 1 Score: 140 bits (354), Expect = 1.270e-38 Identity = 70/152 (46.05%), Postives = 106/152 (69.74%), Query Frame = 1
Query: 40 IQGELLMQRRSKFKDTYPGMWDVSVGGHMTAGDDSLLTAKKETAEELGINFNDTDLEFLFTIATSAQGSTERHGNFNCNEYKDVYMLRYNGGLAEIHFSEGEVEEVR---WEPY-DQVEQRL----TSNDAAYIPRPTDYVTGLFTAVRDRL 471
+QG L++Q+RS+ KDT+PG WDVS+ GH+++GD + TA KE EELG++ + LE+L TIATS +GS+ G+F CNEYKD+++L+Y+G L ++ F+ EV+ V W+ +Q+EQ++ S D YIPRP Y+ LF A+R+R+
Sbjct: 104 LQGNLIIQQRSEGKDTFPGKWDVSIAGHVSSGDSVIETAMKEAKEELGLDVEEEQLEYLGTIATSMRGSSPITGDFLCNEYKDIFLLKYDGSLEDLKFAPEEVQAVSRVGWKTLQEQLEQQIGPEQQSVDGPYIPRPRHYLDLLFGALRERI 255
BLAST of jgi.p|Trimin1|168680 vs. uniprot
Match: L1JKA1_GUITC (Nudix hydrolase domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JKA1_GUITC) HSP 1 Score: 134 bits (338), Expect = 3.110e-36 Identity = 67/151 (44.37%), Postives = 99/151 (65.56%), Query Frame = 1
Query: 43 QGELLMQRRSKFKDTYPGMWDVSVGGHMTAGDDSLLTAKKETAEELGINFNDTDLEFLFTIATSAQGSTERHGNFNCNEYKDVYMLRYNGGLAEIHFSEGEVEEVRWEPYDQVEQRLT--------SNDAAYIPRPTDYVTGLFTAVRDRL 471
QG L++Q+RS+ KDT+PG WDVS+ GH+++GD + TA KE+ EELG++ +LE+L TIATS GS+ G+F CNEYKD+++L+Y G L ++ F+ EV+ V + + Q+L S D YIPRP Y+ LF A+ +R+
Sbjct: 104 QGNLIIQQRSEGKDTFPGKWDVSIAGHVSSGDSVIETAMKESKEELGLDIKKEELEYLGTIATSMAGSSPITGDFLCNEYKDIFLLKYEGHLDDLKFAPEEVQAVSRVDWRSLRQQLEEQIGPDGQSIDGRYIPRPRHYMDLLFGALEERI 254
BLAST of jgi.p|Trimin1|168680 vs. uniprot
Match: A0A7S0QHM2_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QHM2_9CRYP) HSP 1 Score: 129 bits (325), Expect = 4.770e-34 Identity = 63/148 (42.57%), Postives = 90/148 (60.81%), Query Frame = 1
Query: 43 QGELLMQRRSKFKDTYPGMWDVSVGGHMTAGDDSLLTAKKETAEELGINFNDTDLEFLFTIATSAQGSTERHGNFNCNEYKDVYMLRYNGGLAEIHFSEGEVEEVRWEPYDQVEQRLTSN--------DAAYIPRPTDYVTGLFTAVR 462
+G++L+Q+RS KDT+P WDVSVGGH++AGD + A +ET EELG+ + DL F+ T+AT+ GS+ + G F CNEYKD+++ RY+G + ++ EV V W D+VE L D I RP Y+ LF A+R
Sbjct: 125 KGQILLQKRSDEKDTFPSKWDVSVGGHLSAGDTVVEAALRETEEELGLKIGEGDLAFVATVATTVAGSSAKQGAFTCNEYKDLFLARYDGPAEALVYAPDEVAGVAWRDADEVEAALRKQIGPAGEQLDGPLIARPAYYLDALFPALR 272
BLAST of jgi.p|Trimin1|168680 vs. uniprot
Match: A0A7S2TIT0_9EUKA (Hypothetical protein n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TIT0_9EUKA) HSP 1 Score: 122 bits (306), Expect = 2.400e-31 Identity = 61/144 (42.36%), Postives = 88/144 (61.11%), Query Frame = 1
Query: 46 GELLMQRRSKFKDTYPGMWDVSVGGHMTAGDDSLLTAKKETAEELGINFNDTDLEFLFTIATSAQGSTERHGNFNCNEYKDVYMLRYNG------GLAEIHFSEGEVEEVRWEPYDQVEQRLTSNDAAYIPRPTDYVTGLFTAV 459
+L+QRRSK+KDT P M+DVS GH+ GDD+L TA +E EELGI ++ L LFT + A G TE+HG + C E+++VY++ EI ++GEVEE +W P + + L ++D+ Y+PR YV GL A+
Sbjct: 117 NSVLVQRRSKYKDTNPDMFDVSAAGHIAMGDDALETAVREMEEELGILTDEVYLTKLFTAISEASGETEKHGKYLCREFQEVYLVDIEQVEKSALSPVEIKVADGEVEEAKWIPQEDLISALITSDSTYVPRSNSYVQGLAKAL 260
BLAST of jgi.p|Trimin1|168680 vs. uniprot
Match: A0A7S4DWF0_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DWF0_9EUKA) HSP 1 Score: 122 bits (305), Expect = 2.740e-31 Identity = 60/142 (42.25%), Postives = 88/142 (61.97%), Query Frame = 1
Query: 52 LLMQRRSKFKDTYPGMWDVSVGGHMTAGDDSLLTAKKETAEELGINFNDTDLEFLFTIATSAQGSTERHGNFNCNEYKDVYML------RYNGGLAEIHFSEGEVEEVRWEPYDQVEQRLTSNDAAYIPRPTDYVTGLFTAV 459
+L+QRRSK+KDT P M+DVS GH+ GD L TA +E EELGI+ + + LFT + A+G TE+HG + C E+++VY++ + EI ++GEVEE +W P + + L +ND Y+PR + YV GL A+
Sbjct: 112 VLIQRRSKYKDTNPDMFDVSAAGHIAMGDIPLETAVREMEEELGISTQEKNFNKLFTAVSEAKGETEKHGKYVCREFQEVYLVDIAQVENSSASPVEIKVADGEVEEAKWIPKEDLISALATNDPTYVPRSSAYVRGLADAL 253
BLAST of jgi.p|Trimin1|168680 vs. uniprot
Match: A0A7S0IRD5_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IRD5_9EUKA) HSP 1 Score: 121 bits (303), Expect = 3.990e-31 Identity = 62/141 (43.97%), Postives = 90/141 (63.83%), Query Frame = 1
Query: 40 IQGELLMQRRSKFKDTYPGMWDVSVGGHMTAGDDSLLTAKKETAEELGINFNDTDLE--FLFTIATSAQGSTERHGNFNCNEYKDVYMLRYNGGLAE---IHFSEGEVEEVRWEPYDQVEQRLTSNDAAYIPRPTDYVTGL 447
+ G LL+QRRS++KDT+PGMWDVS GH++AGDDSL TA+KE EELG++ + + L L T+ + A+G+T RHG F CNE +D+Y+++Y E + GEVE + +V Q + +++PRP YV L
Sbjct: 98 LDGRLLLQRRSQYKDTHPGMWDVSCAGHISAGDDSLGTARKELEEELGVSVDVSVLRGALLCTLPSCARGATTRHGPFVCNEIQDIYLVQYPAEQLEAGALSLESGEVEAIELLDARKVLQAWERAELSFVPRPPHYVRAL 238 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168680 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_6735 ID=mRNA_6735|Name=jgi.p|Trimin1|168680|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=474bp|location=Sequence derived from alignment at Contig_60:29555..31338- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGCACTGATGAACCATGTGTATTGTGTCACTGCTGCATACAGGGGGAback to top protein sequence of jgi.p|Trimin1|168680 >Trimin1|168680|e_gw1.60.166.1 ID=Trimin1|168680|e_gw1.60.166.1|Name=jgi.p|Trimin1|168680|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=158bp MSTDEPCVLCHCCIQGELLMQRRSKFKDTYPGMWDVSVGGHMTAGDDSLLback to top mRNA from alignment at Contig_60:29555..31338- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_6735 ID=mRNA_6735|Name=jgi.p|Trimin1|168680|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1784bp|location=Sequence derived from alignment at Contig_60:29555..31338- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_60:29555..31338- >mRNA_6735 ID=mRNA_6735|Name=jgi.p|Trimin1|168680|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=474bp|location=Sequence derived from alignment at Contig_60:29555..31338- (Tribonema minus UTEX_B_3156 )back to top |