mRNA_2151 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|158718
Unique NamemRNA_2151
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|158718 vs. uniprot
Match: A0A835YS37_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS37_9STRA)

HSP 1 Score: 538 bits (1387), Expect = 1.420e-193
Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 1 
Query:    1 MRKLPDLESRFPKVQPVTSKYISQLPFILTLSAKCNAGKSYLAVALISLMQREGSITHTWILSPTASSNSIYRNIVSEEHMDRVHDDLSAPAVWNTLKAIQVEMEAITAQYQADLKYAIVHHLYTSGAAVNAMDEHLLDSRGYMPCAPRQPSYCVLVDDAQASPLLSRATANPMLNACLRHRHMARFGVSFVLVSQTVKGLPKAIRTNTTHWAFFKTLNKKEIEECYDEVSGFCEQHEFERLLRLYTLQKFGYLFADIPRQRLSNSF 801
            MRKLPDLESRFPKVQPVTSKYISQLPFILTLSAKCNAGKSYLAVALISLMQREGSITHTWILSPTASSNSIYRNIVSEEHMDRVHDDLSAPAVWNTLKAIQVEMEAITAQYQADLKYAIVHHLYTSGAAVNAMDEHLLDSRGYMPCAPRQPSYCVLVDDAQASPLLSRATANPMLNACLRHRHMARFGVSFVLVSQTVKGLPKAIRTNTTHWAFFKTLNKKEIEECYDEVSGFCEQHEFERLLRLYTLQKFGYLFADIPRQRLSNSF
Sbjct:    1 MRKLPDLESRFPKVQPVTSKYISQLPFILTLSAKCNAGKSYLAVALISLMQREGSITHTWILSPTASSNSIYRNIVSEEHMDRVHDDLSAPAVWNTLKAIQVEMEAITAQYQADLKYAIVHHLYTSGAAVNAMDEHLLDSRGYMPCAPRQPSYCVLVDDAQASPLLSRATANPMLNACLRHRHMARFGVSFVLVSQTVKGLPKAIRTNTTHWAFFKTLNKKEIEECYDEVSGFCEQHEFERLLRLYTLQKFGYLFADIPRQRLSNSF 267
[Close]
BLAST of jgi.p|Trimin1|158718 vs. uniprot
Match: A0A835ZDZ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDZ1_9STRA)

HSP 1 Score: 426 bits (1094), Expect = 8.230e-138
Identity = 208/231 (90.04%), Postives = 220/231 (95.24%), Query Frame = 1 
Query:    1 MRKLPDLESRFPKVQPVTSKYISQLPFILTLSAKCNAGKSYLAVALISLMQREGSITHTWILSPTASSNSIYRNIVSEEHMDRVHDDLSAPAVWNTLKAIQVEMEAITAQYQADLKYAIVHHLYTSGAAVNAMDEHLLDSRGYMPCAPRQPSYCVLVDDAQASPLLSRATANPMLNACLRHRHMARFGVSFVLVSQTVKGLPKAIRTNTTHWAFFKTLNKKEIEECYDEVS 693
            MRKLPDLESRFPKVQPVTSKYISQLPFILTLSAKCNAGKSYLAVALI+LMQREGSITHTWILSPTASSNSIYRNI+ E+H+DRVHDDLSAPAVWNTLKAIQ EME ITAQY+ADLKYAIVHH + SGAAVN++DE LL+SRGYMPC PR PSYCVLVDDAQASPLLSRA ANP LNA LRHRHMARFGVSFVLVSQTVKGLPKA+RTNTTHWAFFKTLNKKEIEECYDE++
Sbjct:    1 MRKLPDLESRFPKVQPVTSKYISQLPFILTLSAKCNAGKSYLAVALITLMQREGSITHTWILSPTASSNSIYRNIIGEDHLDRVHDDLSAPAVWNTLKAIQTEMEGITAQYEADLKYAIVHHKFNSGAAVNSVDEQLLESRGYMPCTPRTPSYCVLVDDAQASPLLSRAKANPFLNAILRHRHMARFGVSFVLVSQTVKGLPKAVRTNTTHWAFFKTLNKKEIEECYDEIT 231
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BLAST of jgi.p|Trimin1|158718 vs. uniprot
Match: A0A836CIA9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIA9_9STRA)

HSP 1 Score: 417 bits (1071), Expect = 7.370e-132
Identity = 203/231 (87.88%), Postives = 216/231 (93.51%), Query Frame = 1 
Query:    1 MRKLPDLESRFPKVQPVTSKYISQLPFILTLSAKCNAGKSYLAVALISLMQREGSITHTWILSPTASSNSIYRNIVSEEHMDRVHDDLSAPAVWNTLKAIQVEMEAITAQYQADLKYAIVHHLYTSGAAVNAMDEHLLDSRGYMPCAPRQPSYCVLVDDAQASPLLSRATANPMLNACLRHRHMARFGVSFVLVSQTVKGLPKAIRTNTTHWAFFKTLNKKEIEECYDEVS 693
            MRKLPDLESRFPKVQPVTSKYISQLPFILTLSAKCNAGKSYLAVALI+LMQREGSITHTWILSPTASSN +YRNI+ E+H+DRVHDDLSAPAVWNTLKAIQ EME ITA Y+ADLKYAI HH + SGAAVN++DE LL+SRGYM C PR PSYCVLVDDAQASPLLSRA ANP LNA LRHRHMARFGVSFVLVSQTVKGLPKA+RTNTTHWAFFKTLNKKEIEECYDE++
Sbjct:    1 MRKLPDLESRFPKVQPVTSKYISQLPFILTLSAKCNAGKSYLAVALITLMQREGSITHTWILSPTASSNQVYRNIIGEDHLDRVHDDLSAPAVWNTLKAIQAEMEGITAAYEADLKYAIAHHKFNSGAAVNSVDEQLLESRGYMACTPRTPSYCVLVDDAQASPLLSRAKANPFLNAVLRHRHMARFGVSFVLVSQTVKGLPKAVRTNTTHWAFFKTLNKKEIEECYDEIT 231
[Close]
BLAST of jgi.p|Trimin1|158718 vs. uniprot
Match: A0A835YSD5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD5_9STRA)

HSP 1 Score: 385 bits (989), Expect = 1.640e-122
Identity = 187/220 (85.00%), Postives = 202/220 (91.82%), Query Frame = 1 
Query:   97 AKCNAGKSYLAVALISLMQREGSITHTWILSPTASSNSIYRNIVSEEHMDRVHDDLSAPAVWNTLKAIQVEMEAITAQYQADLKYAIVHHLYTSGAAVNAMDEHLLDSRGYMPCAPRQPSYCVLVDDAQASPLLSRATANPMLNACLRHRHMARFGVSFVLVSQTVKGLPKAIRTNTTHWAFFKTLNKKEIEECYDEVSGFCEQHEFERLLRLYTLQKFG 756
            AK NAGKSYLAVALISLMQREGSITHTW+LSPTASSN IYRNIV++EHMDRVHDDLSAPAVWNTLKAIQ EMEAITAQY+ADL+YA  HH +TSGAAVN +DE LLDSRG+MPC PR PSYC+LVDDAQASPLLSRA ANP LNA LRHR MARFGVSFVLVSQTVKGL K+IRTNT+HWAFFKTLNK+EIEECYDEVSGFCEQ  FE+LLRLYTL+ +G
Sbjct:  135 AKVNAGKSYLAVALISLMQREGSITHTWVLSPTASSNQIYRNIVTDEHMDRVHDDLSAPAVWNTLKAIQGEMEAITAQYEADLRYATAHHKFTSGAAVNFVDERLLDSRGFMPCTPRTPSYCILVDDAQASPLLSRAKANPFLNAVLRHRRMARFGVSFVLVSQTVKGLAKSIRTNTSHWAFFKTLNKREIEECYDEVSGFCEQEHFEKLLRLYTLEPYG 354
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BLAST of jgi.p|Trimin1|158718 vs. uniprot
Match: A0A835YZW4_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZW4_9STRA)

HSP 1 Score: 254 bits (650), Expect = 9.820e-80
Identity = 126/251 (50.20%), Postives = 179/251 (71.31%), Query Frame = 1 
Query:   55 SKYISQLPFILTLSAKCNAGKSYLAVALISLMQREGSITHTWILSPTASSNSIYRNIVSEEHMDRVHDDLSAPAVWNTLKAIQVEMEAITAQYQADLKYAIVHHLYTSGAAVNAMDEHLLDSRGYMPCAPRQPSYCVLVDDAQASPLLSRATANPMLNACLRHRHMAR-FGVSFVLVSQTVK-GLPKAIRTNTTHWAFFKTLNKKEIEECYDEVSGFCEQHEFERLLRLYTLQKFGYLFADIPRQRLSNSF 801
            S+Y+S++P I+TL     +GKSYLA ALI LMQREG+ITH +I+SPTA+SN++Y+NIV  +  D+++ D+  PAV+ +L+ I    EAI   Y+ DL+Y I    YTSG  V   DE LL++RG+MP  P++PS+C+  DD Q S + SR + N   N  LR RH+A   G+S ++ +QT++ G+P+A+R N+THW FFK+LN+ E+E+ Y+EVSGFC + EFERL   YT +  GYLFAD+PRQ L+N+F
Sbjct:  148 SRYLSRIPAIVTLVGHTGSGKSYLATALIQLMQREGTITHLFIISPTANSNTLYQNIVKTD--DKLYSDIG-PAVFKSLEEIVASCEAIADVYRKDLEYCIALAKYTSGEPVTYFDEALLEARGFMPVVPKRPSFCLFCDDCQGSAIFSRGSRNSFPNLVLRSRHVAGGLGLSIIMAAQTIRSGVPRALRLNSTHWVFFKSLNRMEVEQMYEEVSGFCSKGEFERLFNWYTNEPHGYLFADLPRQLLTNTF 395
[Close]
BLAST of jgi.p|Trimin1|158718 vs. uniprot
Match: A0A835Z5J4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5J4_9STRA)

HSP 1 Score: 238 bits (606), Expect = 3.310e-75
Identity = 117/240 (48.75%), Postives = 167/240 (69.58%), Query Frame = 1 
Query:   70 QLPFILTLSAKCNAGKSYLAVALISLMQREGSITHTWILSPTASSNSIYRNIVSEEHMDRVHDDLSAPAVWNTLKAIQVEMEAITAQYQADLKYAIVHHLYTSGAAVNAMDEHLLDSRGYMPCAPRQPSYCVLVDDAQASPLLSRATANPMLNACLRHRHMAR-FGVSFVLVSQTVK-GLPKAIRTNTTHWAFFKTLNKKEIEECYDEVSGFCEQHEFERLLRLYTLQKFGYLFADIPRQ 783
            ++P I+TL     +GKSYLA ALI +MQREG+ITH +I+SPTA+SN++Y N++  +  D+V+ D+  PAV+ +L+ I    EA+   Y+ DL+Y I    YTSG  V   DE LL++RGYMP  P++PS+C+  DD Q S + SR + N   N  LR RH+A   G+S ++ +QT++ G+P+A+R N+THW  FK+LN+ E+E+ Y+EVSGFC + EFERL   YT +  GYLFAD+PRQ
Sbjct:    1 RIPAIVTLVGHTGSGKSYLATALIQMMQREGTITHLFIISPTANSNTLYSNVLKPD--DKVYSDIG-PAVFKSLEEIVASCEAVADVYRKDLEYCIALAKYTSGEPVTYFDEALLEARGYMPVVPKRPSFCLFCDDCQGSAIFSRGSKNSFPNLVLRSRHVAGGLGLSIIMAAQTIRSGVPRALRLNSTHWVLFKSLNRMEVEQMYEEVSGFCSKGEFERLFNWYTNEPHGYLFADLPRQ 237
[Close]
BLAST of jgi.p|Trimin1|158718 vs. uniprot
Match: A0A835YP98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP98_9STRA)

HSP 1 Score: 234 bits (596), Expect = 2.920e-73
Identity = 128/268 (47.76%), Postives = 176/268 (65.67%), Query Frame = 1 
Query:    4 RKLPDLESRFPKVQPVTSKYISQLPFILTLSAKCNAGKSYLAVALISLMQREGSITHTWILSPTASSNSIYRNIVSEEHMDRVHDDLSAPAVWNTLKAIQVEMEAITAQYQADLKYAIVHHLYTSGAAVNAMDEHLLDSRGYMPCAPRQPSYCVLVDDAQASPLLSRATANPMLNACLRHRHMAR-FGVSFVLVSQTVK-GLPKAIRTNTTHWAFFKTLNKKEIEECYDEVSGFCEQHEFERLLRLYTLQKFGYLFADIPRQRLSNSF 801
            RKLPDL S+FPK++P+TS+Y+S++P I T      +GK++  VALI LM+RE SITH +I+SPTA SN+IYR I   E  D++ DDL    V++TL+ IQ  M  I   Y+  L+YA+    +  G  V+  DE LL+  GY   A R+PS+ +L+DDAQ S + SR   N   N  LR RH AR  G S  + +QT+K G+P+++RTN+TH+  FKT +  E++  Y+EV+GF  + EFERL  LYT  K GYLFAD+   RLS+SF
Sbjct:    3 RKLPDLLSKFPKIEPLTSRYLSRVPTICTAVGGTGSGKTFCLVALIKLMRREKSITHLFIISPTAHSNTIYRAIFDPE-TDQLFDDLGVK-VFDTLRQIQDTMNGIADGYETQLRYALAFERFVRGEDVSTTDEQLLEEGGYRKIAVRRPSFALLIDDAQNSAIFSRHKNNGFPNLVLRSRHCARGLGCSIFMAAQTMKNGVPRSLRTNSTHFMMFKTCSASEMDSLYEEVAGFVSRPEFERLYALYTHGKHGYLFADMIENRLSDSF 268
[Close]
BLAST of jgi.p|Trimin1|158718 vs. uniprot
Match: A0A835YL54_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL54_9STRA)

HSP 1 Score: 186 bits (472), Expect = 1.440e-54
Identity = 109/269 (40.52%), Postives = 163/269 (60.59%), Query Frame = 1 
Query:    4 RKLPDLESRFPKVQPVTSKYISQLPFILTLSAKCNAGKSYLAVALISLMQREGSITHTWILSPTASSNSIYRNIVSEEHMDRVHDDLSAPAVWNTLKAIQVEMEAITAQYQADLKYAIVHHLYTSGAAVNAMDEHLLDSRGYMPCAPRQPSYCVLVDDAQASPLLSRATANPMLNACLRHRHMAR-FGVSFVLVSQTVK-GLPKAIRTNTTHWAFFK-TLNKKEIEECYDEVSGFCEQHEFERLLRLYTLQKFGYLFADIPRQRLSNSF 801
            RK  DL     KV+P+TS+ +S++P +        AGKS+  V LI  MQ E +IT  +I+SPTA+SN+IY+NIV E   DRV+DDLS P ++ +L+ I+   ++    Y  +LK A  +  Y +G  ++  D  LL+  G+    P++P++ V  DD   S L S +  NP  N CLR RH     G S  +VSQT++ G+PKA+R N TH+ +   ++N+KE+E  ++ VS F    +FER LRL+TL+  GYLF D+ ++ LSN +
Sbjct:    3 RKDIDLLKDIAKVEPLTSRVVSRVPCLCIAVGHTGAGKSWKIVELIKRMQMERTITRLFIISPTAASNTIYKNIVREG--DRVYDDLS-PKIYASLEEIESVCKSEAYVYAHELKCAAAYLRYANGLPLDYPDTQLLEQIGWRQMIPKRPAFAVFADDCSHSALFSTSRKNPWSNFCLRCRHAGNGLGDSVFMVSQTMRSGVPKALRENATHFFYVGGSMNRKEVESMWETVSSFVSFDDFERKLRLFTLENHGYLFCDLIKKTLSNRY 268
[Close]
BLAST of jgi.p|Trimin1|158718 vs. uniprot
Match: A0A835ZBD4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBD4_9STRA)

HSP 1 Score: 180 bits (457), Expect = 6.690e-48
Identity = 90/208 (43.27%), Postives = 137/208 (65.87%), Query Frame = 1 
Query:  172 HTWILSPTASSNSIYRNIVSEEHMDRVHDDLSAPAVWNTLKAIQVEMEAITAQYQADLKYAIVHHLYTSGAAVNAMDEHLLDSRGYMPCAPRQPSYCVLVDDAQASPLLSRATANPMLNACLRHRHMAR-FGVSFVLVSQTVK-GLPKAIRTNTTHWAFFKTLNKKEIEECYDEVSGFCEQHEFERLLRLYTLQKFGYLFADIPRQRL 789
            HT    PTA+SN++Y+NI+  +  D+++ D+  P V+ +L  I    EA+   Y+ DL+YAI H  YT+G  V   DE LL+ RG+MP  P++PS+C+  DD Q S + SR   N   N  LR RH+A   G+S +L +QT++ G+P+A+R N+TH+  FKT ++ E++E Y+EVSGFC + EFER    +T + +GY+FAD+ RQ++
Sbjct:   52 HTINFVPTANSNTLYQNILKPD--DKIYSDIG-PNVFKSLDEIVAACEAVGDAYRKDLEYAIAHAKYTNGEPVTYFDEALLEQRGFMPVVPKRPSFCLFCDDCQNSAIFSRGGRNTFPNCVLRSRHVAGGLGLSVILAAQTMRSGVPRALRLNSTHFILFKTHSRVELDEMYEEVSGFCSKGEFERQFNYFTAEPYGYMFADLIRQKV 256
[Close]
BLAST of jgi.p|Trimin1|158718 vs. uniprot
Match: A0A835Z465_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z465_9STRA)

HSP 1 Score: 169 bits (428), Expect = 5.080e-44
Identity = 88/198 (44.44%), Postives = 134/198 (67.68%), Query Frame = 1 
Query:  100 KCNAGKSYLAVALISLMQREGSITHTWILSPTASSNSIYRNIVSEEHMDRVHDDLSAPAVWNTLKAIQVEMEAITAQYQADLKYAIVHHLYTSGAAVNAMDEHLLDSRGYMPCAPRQPSYCVLVDDAQASPLLSRATANPMLNACLRHRHMARF-GVSFVLVSQTVK-GLPKAIRTNTTHWAFFKTLNKKEIEECYDE 687
            + ++GKSYLA ALI++MQREG+ITH +I+SPTA+SN++Y NI+  +  D+V+ D+  P V+ +L  I    EA+   Y+ DL+YAI H  YT+G  V   DE LL+ RG+MP  P++PS+C+  D  Q S + SR   N   N  LR RH+A   G+S +L +QT++ G+P+A+R ++TH+  F T ++ E++E Y+E
Sbjct:  107 RASSGKSYLATALIAMMQREGTITHLFIISPTANSNTLYSNILKPD--DKVYSDIG-PNVFKSLDEIVAACEAVGDAYRKDLEYAIAHAKYTNGELVTYFDEALLEQRGFMPVVPKRPSFCLFCDACQGSAIFSRGGRNTFPNCVLRSRHVAGGQGLSVILAAQTMRSGVPRALRLDSTHFILFNTHSRVELDEMYEE 301
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158718 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A835YS37_9STRA1.420e-193100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZDZ1_9STRA8.230e-13890.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CIA9_9STRA7.370e-13287.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YSD5_9STRA1.640e-12285.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZW4_9STRA9.820e-8050.20AAA domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A835Z5J4_9STRA3.310e-7548.75Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YP98_9STRA2.920e-7347.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YL54_9STRA1.440e-5440.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZBD4_9STRA6.690e-4843.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z465_9STRA5.080e-4444.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_6contigContig_6:883439..884242 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|158718|e_gw1.6.197.1
DescriptionPoxvirus A32 protein
COG categoryS
Max annot lvl4751|Fungi
EggNOG OGs2EY7R@1|root,2SZS6@2759|Eukaryota,3ASX1@33154|Opisthokonta,3PIA8@4751|Fungi
Evalue0.000151
Seed ortholog109760.SPPG_00930T0
Hectar predicted targeting categoryother localisation
TranscriptId159040
TrackFilteredModels1
ProteinId158718
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158718gene_2151Tribonema minus UTEX_B_3156 geneContig_6 883439..884242 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_2151_1exon_2151_1Tribonema minus UTEX_B_3156 exonContig_6 883439..884242 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_2151CDS_2151Tribonema minus UTEX_B_3156 CDSContig_6 883439..884242 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158718Trimin1|158718|e_gw1.6.197.1Tribonema minus UTEX_B_3156 polypeptideContig_6 883439..884242 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_2151 ID=mRNA_2151|Name=jgi.p|Trimin1|158718|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=804bp|location=Sequence derived from alignment at Contig_6:883439..884242- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCAAGCTCCCGGACTTGGAGAGCCGCTTTCCAAAAGTACAACCTGT
GACGTCAAAGTACATATCACAGCTCCCGTTTATTCTGACCCTAAGTGCCA
AGTGTAACGCGGGGAAGAGCTACCTGGCCGTCGCACTCATATCGTTGATG
CAGCGCGAGGGCAGCATCACGCACACGTGGATTTTATCACCGACGGCATC
ATCCAACAGTATATACCGCAACATCGTTAGTGAGGAGCACATGGACAGAG
TACACGATGACCTCTCAGCGCCGGCGGTGTGGAACACGCTTAAAGCCATA
CAGGTTGAGATGGAGGCGATCACAGCACAATATCAGGCCGATTTGAAATA
TGCCATCGTTCACCACCTCTACACCTCTGGCGCCGCTGTGAACGCAATGG
ACGAGCACCTTCTGGACAGCCGCGGGTACATGCCGTGCGCGCCGCGCCAG
CCGTCGTACTGTGTGCTCGTGGATGACGCACAGGCAAGTCCGCTGCTGTC
GCGTGCCACCGCGAACCCGATGTTGAACGCTTGCCTGCGTCATAGGCATA
TGGCACGGTTCGGCGTCAGCTTCGTGTTGGTTAGTCAAACCGTCAAGGGG
CTCCCCAAAGCGATTCGCACGAACACCACTCATTGGGCGTTTTTCAAAAC
GCTCAACAAGAAGGAGATCGAAGAGTGCTATGATGAAGTCAGCGGCTTCT
GCGAGCAGCATGAATTCGAGCGTTTGCTGCGGCTGTACACTCTTCAAAAA
TTCGGTTATCTTTTTGCCGACATCCCAAGGCAACGGCTCTCTAATAGCTT
TTAA
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protein sequence of jgi.p|Trimin1|158718

>Trimin1|158718|e_gw1.6.197.1 ID=Trimin1|158718|e_gw1.6.197.1|Name=jgi.p|Trimin1|158718|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=268bp
MRKLPDLESRFPKVQPVTSKYISQLPFILTLSAKCNAGKSYLAVALISLM
QREGSITHTWILSPTASSNSIYRNIVSEEHMDRVHDDLSAPAVWNTLKAI
QVEMEAITAQYQADLKYAIVHHLYTSGAAVNAMDEHLLDSRGYMPCAPRQ
PSYCVLVDDAQASPLLSRATANPMLNACLRHRHMARFGVSFVLVSQTVKG
LPKAIRTNTTHWAFFKTLNKKEIEECYDEVSGFCEQHEFERLLRLYTLQK
FGYLFADIPRQRLSNSF*
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mRNA from alignment at Contig_6:883439..884242-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_2151 ID=mRNA_2151|Name=jgi.p|Trimin1|158718|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=804bp|location=Sequence derived from alignment at Contig_6:883439..884242- (Tribonema minus UTEX_B_3156 )
ATGCGCAAGCTCCCGGACTTGGAGAGCCGCTTTCCAAAAGTACAACCTGT
GACGTCAAAGTACATATCACAGCTCCCGTTTATTCTGACCCTAAGTGCCA
AGTGTAACGCGGGGAAGAGCTACCTGGCCGTCGCACTCATATCGTTGATG
CAGCGCGAGGGCAGCATCACGCACACGTGGATTTTATCACCGACGGCATC
ATCCAACAGTATATACCGCAACATCGTTAGTGAGGAGCACATGGACAGAG
TACACGATGACCTCTCAGCGCCGGCGGTGTGGAACACGCTTAAAGCCATA
CAGGTTGAGATGGAGGCGATCACAGCACAATATCAGGCCGATTTGAAATA
TGCCATCGTTCACCACCTCTACACCTCTGGCGCCGCTGTGAACGCAATGG
ACGAGCACCTTCTGGACAGCCGCGGGTACATGCCGTGCGCGCCGCGCCAG
CCGTCGTACTGTGTGCTCGTGGATGACGCACAGGCAAGTCCGCTGCTGTC
GCGTGCCACCGCGAACCCGATGTTGAACGCTTGCCTGCGTCATAGGCATA
TGGCACGGTTCGGCGTCAGCTTCGTGTTGGTTAGTCAAACCGTCAAGGGG
CTCCCCAAAGCGATTCGCACGAACACCACTCATTGGGCGTTTTTCAAAAC
GCTCAACAAGAAGGAGATCGAAGAGTGCTATGATGAAGTCAGCGGCTTCT
GCGAGCAGCATGAATTCGAGCGTTTGCTGCGGCTGTACACTCTTCAAAAA
TTCGGTTATCTTTTTGCCGACATCCCAAGGCAACGGCTCTCTAATAGCTT
TTAA
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Coding sequence (CDS) from alignment at Contig_6:883439..884242-

>mRNA_2151 ID=mRNA_2151|Name=jgi.p|Trimin1|158718|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=804bp|location=Sequence derived from alignment at Contig_6:883439..884242- (Tribonema minus UTEX_B_3156 )
ATGCGCAAGCTCCCGGACTTGGAGAGCCGCTTTCCAAAAGTACAACCTGT
GACGTCAAAGTACATATCACAGCTCCCGTTTATTCTGACCCTAAGTGCCA
AGTGTAACGCGGGGAAGAGCTACCTGGCCGTCGCACTCATATCGTTGATG
CAGCGCGAGGGCAGCATCACGCACACGTGGATTTTATCACCGACGGCATC
ATCCAACAGTATATACCGCAACATCGTTAGTGAGGAGCACATGGACAGAG
TACACGATGACCTCTCAGCGCCGGCGGTGTGGAACACGCTTAAAGCCATA
CAGGTTGAGATGGAGGCGATCACAGCACAATATCAGGCCGATTTGAAATA
TGCCATCGTTCACCACCTCTACACCTCTGGCGCCGCTGTGAACGCAATGG
ACGAGCACCTTCTGGACAGCCGCGGGTACATGCCGTGCGCGCCGCGCCAG
CCGTCGTACTGTGTGCTCGTGGATGACGCACAGGCAAGTCCGCTGCTGTC
GCGTGCCACCGCGAACCCGATGTTGAACGCTTGCCTGCGTCATAGGCATA
TGGCACGGTTCGGCGTCAGCTTCGTGTTGGTTAGTCAAACCGTCAAGGGG
CTCCCCAAAGCGATTCGCACGAACACCACTCATTGGGCGTTTTTCAAAAC
GCTCAACAAGAAGGAGATCGAAGAGTGCTATGATGAAGTCAGCGGCTTCT
GCGAGCAGCATGAATTCGAGCGTTTGCTGCGGCTGTACACTCTTCAAAAA
TTCGGTTATCTTTTTGCCGACATCCCAAGGCAACGGCTCTCTAATAGCTT
TTAA
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