mRNA_2232 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|158540
Unique Name	mRNA_2232
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|158540 vs. uniprot
Match: A0A835YNL7_9STRA (Putative flagellar radial spoke protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL7_9STRA)

HSP 1 Score: 858 bits (2217), Expect = 2.070e-312
Identity = 494/494 (100.00%), Postives = 494/494 (100.00%), Query Frame = 1

Query:    1 MTSFEEARQILQKESTDGVCLYDHLAEVVLKVLSDKLLDGSESFEHLSAAVKEARATPQKPVAGVSEAAARAAQINWATSAQSLFAVPDEPPEGGPRVPDLLDEANMWAAAGISFGASETYRIFLAVKRLAETLPGDHETLRFWGQVKGRSADYLVVEGRALEEQLGDTEEAGIEGTVGANRYTYWVSTGAGAPWTQLPPVTPAQIVAARKIRRYLTGDLDAAVPGYPPFPGTERNFLRAQIARITAGTAVSPSGFFEADADADPGEIKAAEEEAINEAFPKPASDLASADAWVHHELELNKLGRNRPLPEPEEGAEPPSGPEEDPPEEVPPLRSLAEDEEGAWGFRTSPAGAGATANSAAVAKSLLWPGAYAIAAGRRATCVYVGHAVKHAAAPYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENGEPAAAPEPEEEGASLFELGRWMLLELGVEVGVRKWVECEMLQRLCLKI 1482
            MTSFEEARQILQKESTDGVCLYDHLAEVVLKVLSDKLLDGSESFEHLSAAVKEARATPQKPVAGVSEAAARAAQINWATSAQSLFAVPDEPPEGGPRVPDLLDEANMWAAAGISFGASETYRIFLAVKRLAETLPGDHETLRFWGQVKGRSADYLVVEGRALEEQLGDTEEAGIEGTVGANRYTYWVSTGAGAPWTQLPPVTPAQIVAARKIRRYLTGDLDAAVPGYPPFPGTERNFLRAQIARITAGTAVSPSGFFEADADADPGEIKAAEEEAINEAFPKPASDLASADAWVHHELELNKLGRNRPLPEPEEGAEPPSGPEEDPPEEVPPLRSLAEDEEGAWGFRTSPAGAGATANSAAVAKSLLWPGAYAIAAGRRATCVYVGHAVKHAAAPYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENGEPAAAPEPEEEGASLFELGRWMLLELGVEVGVRKWVECEMLQRLCLKI
Sbjct:    1 MTSFEEARQILQKESTDGVCLYDHLAEVVLKVLSDKLLDGSESFEHLSAAVKEARATPQKPVAGVSEAAARAAQINWATSAQSLFAVPDEPPEGGPRVPDLLDEANMWAAAGISFGASETYRIFLAVKRLAETLPGDHETLRFWGQVKGRSADYLVVEGRALEEQLGDTEEAGIEGTVGANRYTYWVSTGAGAPWTQLPPVTPAQIVAARKIRRYLTGDLDAAVPGYPPFPGTERNFLRAQIARITAGTAVSPSGFFEADADADPGEIKAAEEEAINEAFPKPASDLASADAWVHHELELNKLGRNRPLPEPEEGAEPPSGPEEDPPEEVPPLRSLAEDEEGAWGFRTSPAGAGATANSAAVAKSLLWPGAYAIAAGRRATCVYVGHAVKHAAAPYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENGEPAAAPEPEEEGASLFELGRWMLLELGVEVGVRKWVECEMLQRLCLKI 494

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BLAST of jgi.p|Trimin1|158540 vs. uniprot
Match: D7FS43_ECTSI (Putative: flagellar radial spoke protein 4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS43_ECTSI)

HSP 1 Score: 470 bits (1210), Expect = 3.180e-160
Identity = 243/390 (62.31%), Postives = 292/390 (74.87%), Query Frame = 1

Query:    1 MTSFEEARQILQKESTDGVCLYDHLAEVVLKVLSDKLLDGSESFEHLSAAVKEARATPQKPVAGVSEAAARAAQINWATSAQSLFAVPDEPPEGGPRVPDLLDEANMWAAAGISFGASETYRIFLAVKRLAETLPGDHETLRFWGQVKGRSADYLVVEGRALEEQLGDTEEAGIEGTVGANRYTYWVSTGAGAPWTQLPPVTPAQIVAARKIRRYLTGDLDAAVPGYPPFPGTERNFLRAQIARITAGTAVSPSGFFEADADADPGEIKAAEEEAINEAFPKPASDLASADAWVHHELELNKLGRNRPLPEPEEGAEPPSGPEEDPPEEVPPLRSLAEDEEGAWGFRTSPAGAGATANSAAVAKSLLWPGAYAIAAGRRATCVYVGHAVK 1170
            M+++E +RQ LQ+ES+DGV LY HLA V+LKVLS++  D S  FEHLSA+VKE    P      + + +A A Q+ WA S Q+LFAVPDEPPEGG  VPD+LDEANMW   G+SFG  ETYR++L+VK+LAE+LPG+HE+LRFWG++  R  DY+VVEG+AL+E LG+ +EA  EG  G NR TYWV+   G  W +LPPVT AQI AARKI+RY TGDL++ V GYPPFPGTE N LRAQIARITAG  VSP+GFFE D DA+P  IK AE+E+INEAFPK   +L + D WVHHE ELN LGR RP+PE  +    P   EEDPPEEV PLRSLAED EG+WGFRT PAGAG +AN+  VAKSL WPGA A+A G+R T VY G  VK
Sbjct:    1 MSTYEGSRQFLQQESSDGVSLYTHLANVLLKVLSERPSDASAVFEHLSASVKEGTVKPDSTTPSMGQQSAAAEQLKWAQSNQALFAVPDEPPEGGAVVPDMLDEANMWEWGGVSFGRLETYRLYLSVKKLAESLPGEHESLRFWGKITTRGDDYVVVEGKALDETLGEFDEALQEGKDGGNRCTYWVARSPGREWKELPPVTQAQITAARKIKRYFTGDLESPVQGYPPFPGTEINLLRAQIARITAGACVSPAGFFEVDEDAEPASIKVAEDESINEAFPKAVEELMTTDGWVHHEFELNTLGRCRPMPEKLDDEGNPIE-EEDPPEEVAPLRSLAEDSEGSWGFRTCPAGAGQSANAMVVAKSLRWPGAIAVAFGKRFTNVYSGDGVK 389

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BLAST of jgi.p|Trimin1|158540 vs. uniprot
Match: A0A7S2XZR7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZR7_9STRA)

HSP 1 Score: 376 bits (965), Expect = 4.340e-123
Identity = 204/403 (50.62%), Postives = 271/403 (67.25%), Query Frame = 1

Query:   16 EARQILQKESTDGVCLYDHLAEVVLKVLSDKLLDGSESFEHLSAAVKEARATPQKPVAGVSE-----------AAARAAQINWATSAQSLFAVPDEPPEGGPRVPDLLDEANMWAAAGISFGASETYRIFLAVKRLAETLPGDHETLRFWGQVKGRSADYLVVEGRALEEQLGDTEEAGIEGTVGANRYTYWVSTGAGAPWTQLPPVTPAQIVAARKIRRYLTGDLDAAVPGYPPFPGTERNFLRAQIARITAGTAVSPSGFFEADADADPGEIKAAEEEAINEAFPKPASDLASADAWVHHELELNKLGRNRPLPEP-EEGAEPPSGPEEDPPEEVPPLRSLAEDEEGAWGFRTSPAGAGATANSAAVAKSLLWPGAYAIAAGRRATCVYVGHAVKHAAAPY 1188
            EARQ LQK S DGV LY+HL+EV+LK+L ++  + +ESFEH+SA VK +   P K  +   +              R  Q++WA+S+  LF VPDE P+  P  PD++DEANMW  AGISFG  +TYR++L+VK LAE+L  D+E+LRFWG++  R+ DY +VEGR  E+   D      EG  G+NRYTYWV+  A + WT LP +T  QIV +R++R+ LTGDLDA V  YPPFPG E++ LRAQIARIT  T VSP+GFFE D D++   IK A+ E I E+FP+P  +L     W HHE+ELN  GR RP+PE  ++  EP    +E+ PEE+ PLR+L  D+EGAW FRT+P GAG +A S  VA+S++WPGA AIA G+R T +YVG+ +K +   Y
Sbjct:    7 EARQFLQKNSADGVSLYEHLSEVLLKILIERPSNAAESFEHISAMVKSSTIQPSKAGSITDDDELIQESRKISKQVRKKQLDWASSSLKLFKVPDEIPDAIPAFPDMMDEANMWEWAGISFGREQTYRLYLSVKTLAESLNPDYESLRFWGKINTRNGDYYIVEGRTFEDPEFDPMLQ--EGRDGSNRYTYWVAKSATSGWTMLPNLTMEQIVISRQLRKLLTGDLDAPVWSYPPFPGQEKHLLRAQIARITHSTCVSPTGFFEMDEDSEEPLIKLADAETIAESFPRPLEELRITGGWCHHEMELNVRGRCRPMPEVLDDDGEPVE--DENAPEEIEPLRTLDNDDEGAWTFRTAPGGAGESARSMVVARSMVWPGAVAIAFGKRFTNIYVGYGLKFSPTSY 405

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BLAST of jgi.p|Trimin1|158540 vs. uniprot
Match: A0A7S1UB83_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UB83_9STRA)

HSP 1 Score: 352 bits (902), Expect = 1.750e-113
Identity = 203/405 (50.12%), Postives = 267/405 (65.93%), Query Frame = 1

Query:    1 MTSFEEARQILQKESTDGVCLYDHLAEVVLKVLSDKLLDGSESFEHLSAAVKE---ARATPQKPVAGVSEAAARAA---QINWATSAQSLFAVPDEPPEGGPRVPDLLDEANMWAAAGISFGASETYRIFLAVKRLAE-TLPGDHETLRFWGQVKGRSADYLVVEGRALEEQLGDTEEAGIEGTVGANRYTYWVSTGAGAPWTQLPPVTPAQIVAARKIRRYLTGDLDAAVPGYPPFPGTERNFLRAQIARITAGTAVSPSGFFEADADA--DPGEIKAAEEEAINEAFPKPASDLASADAWVHHELELNKLGRNRPLPEPEEGAEPPSGPEEDPPEEVPPLRSLAEDEEGAWGFRTSPAGAGATANSAAVAKSLLWPGAYAIAAGRRATCVYVGHAVKHAAAPY 1188
            M + EEA+Q +  E   G  LY HL++V+L++L DK  D    FEH+SAAVKE   A  +P   V GV + A  A    Q+ WA +A +L+AVPDEP EGGP +PDL+D A M+  AG+SFGA ET+R+ L++K LAE      +E+ RFWG+V+ R+  + V E   ++E +   + A +EG  GAN+YTY+V+  + A WT+LP V  AQ+V A+K+RRYLTGDL A VPGYPPF GTE ++LRAQI RITA   VSP+GF+EAD DA  +P   K  + E + EA P    +L S D WV HE+ +  +GR R LPEPEE  E    PE + PE   PL +LA+DEEG+W  RT+P GA ATAN+  VA+SL WPGA+AIA   + T +YVG AV +AAA Y
Sbjct:    1 MATLEEAKQFMSMEDEAGQSLYAHLSDVILQILVDKPKDARRDFEHISAAVKEQAFAAPSPADLVDGVKKTAEPAGAEKQLAWAQAAAALYAVPDEPAEGGPALPDLMDLARMFELAGVSFGAEETFRLALSLKTLAEKNADAGYESFRFWGRVETRAGYFYVAEAPTVDE-IEIEDAAKMEGAEGANKYTYFVTPSSSADWTKLPHVNAAQLVVAQKLRRYLTGDLAAKVPGYPPFEGTEAHYLRAQIGRITAECGVSPAGFYEADEDAGLEPAPAKIKDAEGLAEAPPTMGEELRSLDGWVRHEMLITAIGRCRALPEPEED-ENGEVPELEQPEIKEPLSALADDEEGSWVLRTAPGGAAATANAFVVARSLKWPGAFAIAGAGKFTNIYVGDAVPYAAATY 403

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BLAST of jgi.p|Trimin1|158540 vs. uniprot
Match: A0A7S3XSR5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSR5_HETAK)

HSP 1 Score: 313 bits (803), Expect = 3.570e-100
Identity = 170/304 (55.92%), Postives = 209/304 (68.75%), Query Frame = 1

Query:  211 RAAQINWATSAQSLFAVPDEPPEGGPRVPDLLDEANMWAAAGISFGASETYRIFLAVKRLAETLPGDHETLRFWGQVKGRSADYLVVEGRALEEQLGDTEEAGIEGTVGANRYTYWVSTGAGAPWTQLPPVTPAQIVAARKIRRYLTGDLDAAVPGYPPFPGTERNFLRAQIARITAGTAVSPSGFFEADADADPGEIKAAEEEAINEAFPKPASDLASADAWVHHELELNKLGRNRPLPEP-EEGAEPPSGPEEDPPEEVPPLRSL-AEDEEG----AWGFRTSPAGAGATANSAAVAKSLLW 1104
            R AQ++WA      + V DE P+  P  PDL+DEANMW  AG+SFG  ETYR++L+VK LAE+LP D+E+LRFWG+V  R   Y +VEG+  E++  D +    EG  GAN+YTYW +T A   W +LPPVT AQ+VAAR++RR   GDL A V  YPPFPG ER  LRAQIARIT GTAVSP+GFFE D +++  +IK AE EAINE FPKP  +L     W HHELELN LGR RP+PE  +E  +P    +ED PE V PLR+L AEDEEG     W FR  PAG+G +ANS  VA+SL+W
Sbjct:   42 RKAQLDWAGKTLKHYKVADELPDAFPAFPDLMDEANMWEWAGVSFGREETYRLYLSVKVLAESLPADYESLRFWGRVSARGGAYYIVEGKTFEDKE-DLDPEKEEGRDGANKYTYWAATAATEKWERLPPVTMAQVVAARRVRRLFAGDLAAPVVAYPPFPGAERELLRAQIARITHGTAVSPAGFFELDEESEEPQIKFAEAEAINEVFPKPLEELKERAGWAHHELELNTLGRCRPMPERLDENGDPIE--DEDAPEAVDPLRTLDAEDEEGREEPTWTFRAGPAGSGESANSHVVARSLVW 342

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BLAST of jgi.p|Trimin1|158540 vs. uniprot
Match: A0A7S3M2Q3_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2Q3_9STRA)

HSP 1 Score: 302 bits (773), Expect = 2.230e-94
Identity = 184/406 (45.32%), Postives = 244/406 (60.10%), Query Frame = 1

Query:    1 MTSFEEARQILQKESTDGVCLYDHLAEVVLKVLSDKLLDGSESFEHLSAAVKEARATPQ----KPVAGVSEAAARAAQINWATSAQSLFAVPDEPPEG-GPRVPDLLDEANMWAAAGISFGASETYRIFLAVKRLAETLPGDHETLRFWGQVKGRSADYLVVEGRALEEQLGDTEEAGIEGTVGANRYTYWVSTGAG-APWTQLPPVTPAQIVAARKIRRYLTGDLDAAVPGYPPFPGTERNFLRAQIARITAGTAVSPSGFFEADADADPGEIKAAEEEAINEAFPKPASDLASADAWVHHELELNKLGRNRPLPEPE----EGAEPPSGPEEDPPEEVPPLRSLAEDEEGAWGFRTSPAGAGATANSAAVAKSLLWPGAYAIAAGRRATCVYVGHAVKHAAAPY 1188
            M +  E RQIL  E   G  LY HL E ++++L ++  +  +SFE +SAAVK     P     KP+     AA     + WA    +L   P+EPPE    +VPDLLD+AN++  AG+SFG  E YR++L++K+L ETLP + E +R +G++  RS  Y +VEG   E++  D  E+  EG  GAN+Y YWV+       WT+LP V   Q+V AR  RR  TG LDAAVP YPPFPGTERN LRAQIA I   T++SP G+F+ + D DP ++  AE EA+ E FPK +S+L   + W HHE +LN+LGR   +PE +    E  EP     EDP E   PL ++  +   AW FR  P G G++A SA VA+SLLWPGA A+ AGRR   VYVG  V + A  Y
Sbjct:    1 MATAAELRQILS-EDPSGKDLYGHLTETLMRILIERPKNAYDSFELISAAVKANPLNPDPENGKPLPP--SAAELEKMLAWAKKCSALLKNPEEPPEDPSVKVPDLLDDANLYEWAGVSFGKGEIYRLYLSIKKLCETLPAEVEKIRLFGKISTRSLPYYIVEGLNPEDEEAD--ESKQEGKNGANKYAYWVTQSIEEGKWTKLPNVNMEQVVKARLFRRLFTGSLDAAVPSYPPFPGTERNLLRAQIACIAGATSISPDGYFDLNDD-DPPQVVPAEAEAMAERFPKTSSELKDPEGWKHHEADLNRLGRVTAMPEQQDENGEVIEP-----EDPVEAATPLDTIKPE---AWTFRVCPGGVGSSAGSAVVARSLLWPGAVAVTAGRRFVNVYVGSGVAYTATAY 392

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BLAST of jgi.p|Trimin1|158540 vs. uniprot
Match: A0A2P4XL78_9STRA (Flagellar radial spoke protein n=10 Tax=Phytophthora TaxID=4783 RepID=A0A2P4XL78_9STRA)

HSP 1 Score: 275 bits (703), Expect = 8.530e-84
Identity = 177/410 (43.17%), Postives = 242/410 (59.02%), Query Frame = 1

Query:    1 MTSFEEARQILQKESTDGVCLYDHLAEVVLKVLSDKLLDGSESFEHLSAAVKEAR-ATPQKP--VAGVSEAA-----ARAAQINWATSAQSLFAVPDE---PPEGGPRVPDLLDEANMWAAAGISFGASETYRIFLAVKRLAETLPGDHETLRFWGQVKGRSADYLVVEGRALEEQLGDTEEAGIEGTVGANRYTYWVSTGAGA-PWTQLPPVTPAQIVAARKIRRYLTGDLDAAVPGYPPFPGTERNFLRAQIARITAGTAVSPSGFFEADADADPGEIKAAEEEAINEAFPKPASDLASADAWVHHELELN-KLGRNRPLPEPEEGAEPPSGPEEDPPEEVPPLRSLAEDEEGAWGFRTSPAGAGATANSAAVAKSLLWPGAYAIAAGRRATCVYVGHAVKHAAAPYE 1191
            MT+ EEA+  L+KES DG  LYDHL +V+LK++ ++  +  E+FE +S  VK+ R   PQ+P  V G S+ +     A+  Q NW      L  +  E   P E    V DLLDEA M+  AG+ F   ET+R+ LA++RLA+T       +RFWG++ GR  DY V EG    E   +  EA  EG  GAN+ TYWV    GA  W QLPPV   QI+ AR++RRY+ GDL+A V G+PPFPG E+N+LRAQIARI+AGT + P G+F+    ++ G+I  AEE  I     K A+DL    +W H   E+N + GR  P+P P+  A+    P E   E  PPLR+L+ED+  +W     PA         AV +SL+WPGA +IA G++   VYVGH VK+ + P++
Sbjct:    1 MTTLEEAKAFLKKESPDGTNLYDHLGDVLLKIIVERPENLHETFESISTLVKQQRYLAPQQPPTVDGGSQLSSIKKQAQTHQENWCNVGLELLKLKSEDEAPSEPATGVADLLDEAKMFEWAGLGFSKGETFRLSLALQRLAQT--NGTVNMRFWGKILGRGTDYYVAEGELPTEYEPEDPEA-EEGATGANKLTYWVMKDNGAYQWIQLPPVRREQILVARQLRRYVRGDLEAPVLGHPPFPGLEKNYLRAQIARISAGTVLCPDGYFQI---SEEGDITPAEEPEI-----KAAADLVDLGSWTHFTKEINARYGRMTPMP-PQTNADGEEEPREGE-EFAPPLRALSEDKPLSWRVDRLPATIQPAVGEVAVVRSLVWPGAVSIAVGKKFLNVYVGHGVKYLSEPFQ 397

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BLAST of jgi.p|Trimin1|158540 vs. uniprot
Match: H3GLW4_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLW4_PHYRM)

HSP 1 Score: 275 bits (703), Expect = 8.530e-84
Identity = 179/410 (43.66%), Postives = 241/410 (58.78%), Query Frame = 1

Query:    1 MTSFEEARQILQKESTDGVCLYDHLAEVVLKVLSDKLLDGSESFEHLSAAVKEAR-ATPQKPVA--GVSEAA-----ARAAQINWATSAQSLFAVPDEPP---EGGPRVPDLLDEANMWAAAGISFGASETYRIFLAVKRLAETLPGDHETLRFWGQVKGRSADYLVVEGRALEEQLGDTEEAGIEGTVGANRYTYWVSTGAGA-PWTQLPPVTPAQIVAARKIRRYLTGDLDAAVPGYPPFPGTERNFLRAQIARITAGTAVSPSGFFEADADADPGEIKAAEEEAINEAFPKPASDLASADAWVHHELELN-KLGRNRPLPEPEEGAEPPSGPEEDPPEEVPPLRSLAEDEEGAWGFRTSPAGAGATANSAAVAKSLLWPGAYAIAAGRRATCVYVGHAVKHAAAPYE 1191
            MT+ EEA+  L+K+S DG  LYDHL +V+LK++ ++  +  E+FE++S  VK+ R   PQ+P A    SE +     A+A Q NW   A  L  +  E     E    V DLLDEANM+  AG+ F   ET+R+ LA++RLA+T       LRFWG++ GR  DY VVEG  L  Q    +    EG  G N+ TYWV    GA  W QLPPV   QI+ AR++RRY+ GDLDA V G+PPFPG E+NFLRAQIARI+AGT + P+G+F+     + G+I  AEE  I     K A++L    +W H   E+N + GR  PLP P+  A+    P E   E  PPLR L+ED+  +W     PA         AV +SL+WPGA +IA G++   VYVG+ VK  + P++
Sbjct:    1 MTTLEEAKAFLKKDSPDGTNLYDHLGDVLLKIIVERPENLHETFENISTLVKQQRYLAPQQPAAVDATSELSSIKKLAQAHQENWCNVALELLKIKSEEEAALEPATGVADLLDEANMFEWAGLGFSKGETFRLSLALQRLAQT--NSTVNLRFWGKLLGRGTDYYVVEGE-LPTQYEPEDLEAEEGAAGVNKLTYWVLKDNGAYEWVQLPPVRQEQILVARQLRRYVRGDLDAPVLGHPPFPGLEKNFLRAQIARISAGTVLCPAGYFQV---TEEGDITPAEEPEI-----KAAAELVDLGSWTHFTKEINARYGRMTPLP-PQTNADGEEEPREGE-EFAPPLRVLSEDKPLSWRVDRLPATLQPAVGEVAVVRSLVWPGAVSIAVGKKFLNVYVGNGVKFLSEPFQ 397

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BLAST of jgi.p|Trimin1|158540 vs. uniprot
Match: D0N4D2_PHYIT (Flagellar radial spoke protein, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N4D2_PHYIT)

HSP 1 Score: 273 bits (698), Expect = 4.600e-83
Identity = 174/421 (41.33%), Postives = 243/421 (57.72%), Query Frame = 1

Query:    1 MTSFEEARQILQKESTDGVCLYDHLAEVVLKVLSDKLLDGSESFEHLSAAVKEAR--ATPQKPVAGVSEAA-----ARAAQINWATSAQSLFAVP---DEPPEGGPRVPDLLDEANMWAAAGISFGASETYRIFLAVKRLAETLPGDHETLRFWGQVKGRSADYLVVEGR---ALEEQLGDTEEAGIEGTVGANRYTYWVSTGAGA-PWTQLPPVTPAQIVAARKIRRYLTGDLDAAVPGYPPFPGTERNFLRAQIARITAGTAVSPSGFFEADADADPGEIKAAEEEAINEAFPKPASDLASADAWVHHELELN-KLGRNRPLP---------EPEEGAEPPSGPEEDPPEEVPPLRSLAEDEEGAWGFRTSPAGAGATANSAAVAKSLLWPGAYAIAAGRRATCVYVGHAVKHAAAPYE 1191
            MT+ EEA+  L+KES DG  LYDHL +V+LK++ ++  +  E FE++S +VK+ R  A P  P  G S+ +     A+  Q NW   A  L  +    D P E    V DLLDEANM+  AG+ F   ET+R+ LA++RLA++   +   +RFWG++ GR ADY V EG    A E +  D EE+      GAN+ TYW     G   W QLPPV   QI+AAR++RRY+ GDL+A V G+PPFPG E+N+LRAQIARI++GT + P+G+FE + +   G+I   EE  I     K  +DL    +W H+  E+N + GR  P+P         EP EG E            VPPLR+L+ED+  +W     P     +    AV +SL+WPGA +IA G++    YVGH VK+ + P++
Sbjct:    1 MTTLEEAKAFLKKESPDGTNLYDHLGDVLLKIIVERPENLHEMFENISTSVKQQRYLAPPLPPTDGDSQLSSYKKQAQTHQENWCNVALELLKLKSQDDAPSEAATGVADLLDEANMFEWAGLGFSKGETFRLSLALQRLAQS--NNTVNMRFWGKILGRGADYYVAEGELSTAYEPEDLDAEES----ATGANKLTYWAMKDNGMYQWVQLPPVGRDQILAARQLRRYVRGDLEAPVLGHPPFPGVEKNYLRAQIARISSGTVLCPAGYFEVNEE---GDITPVEEPEI-----KATADLLDLGSWTHYTKEINARYGRMTPMPPLTNADGEEEPREGGE-----------FVPPLRALSEDKPMSWRVDRLPGTLQPSVGEVAVVRSLVWPGAVSIAVGKKFLNAYVGHGVKYLSEPFQ 396

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BLAST of jgi.p|Trimin1|158540 vs. uniprot
Match: A0A662WVF1_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WVF1_9STRA)

HSP 1 Score: 276 bits (707), Expect = 5.460e-83
Identity = 182/416 (43.75%), Postives = 243/416 (58.41%), Query Frame = 1

Query:    1 MTSFEEARQILQKESTDGVCLYDHLAEVVLKVLSDKLLDGSESFEHLSAAVKEAR---------ATPQKPVAGVSEAAAR---AAQINWATSAQSLFAVPDE---PPEGGPRVPDLLDEANMWAAAGISFGASETYRIFLAVKRLAETLPGDHET--LRFWGQVKGRSADYLVVEGRALEEQLGDTEEAGIEGTVGANRYTYWVSTGAGA-PWTQLPPVTPAQIVAARKIRRYLTGDLDAAVPGYPPFPGTERNFLRAQIARITAGTAVSPSGFFEADADADPGEIKAAEEEAINEAFPKPASDLASADAWVHHELELN-KLGRNRPLPEPEEGAEPPSGPEEDPPEEVPPLRSLAEDEEGAWGFRTSPAGAGATANSAAVAKSLLWPGAYAIAAGRRATCVYVGHAVKHAAAPYE 1191
            MT+ EEA+  L+KES DG  LYDHLA+V+LK+L ++  +  ESFE+LS  VK+ R           PQ P +  ++ A R     Q  W   A  L  +  E   PPE    V DLLDEANM+  AG+ F   ET+R+ LA++RLA+T    H T  +RFWG++ G  ADY V EG        D  EA  EG  GAN+ TYWV    GA  W QLP V   QI+AAR++RR++ GDL+AAV G+PPFPG+E++F+RAQI RI+AGT + P+G+F+       GEI  AEE  I     K A++LA  ++W H   E+N + GR  P+P P   A+    P ED  E  PPLR+L+ED   +W     PA         AV +SL+WPGA +IA G++   VYVGH +K    P++
Sbjct:  119 MTTLEEAKAFLKKESPDGTNLYDHLADVLLKILVERPENLHESFENLSTLVKQQRYLVPQQPPTVDPQAPDSSFNKQAVRDLFPQQEKWCNVALELLKLKSEDDAPPEPATGVADLLDEANMFEWAGVGFSKGETFRLALALQRLAQT----HATVSMRFWGKLLGWGADYYVAEGELPTPIEPDDPEA-EEGPAGANKLTYWVMKDDGAYEWVQLPSVRREQILAARQLRRFVRGDLEAAVLGHPPFPGSEKHFMRAQITRISAGTVLCPAGYFQEIE----GEIVPAEEPEI-----KTAAELADLNSWTHFTKEVNARYGRMTPMP-PATNADGEEEPREDE-EFAPPLRALSEDTPSSWRVDRLPATLQPAVGEVAVVRSLVWPGAVSIAVGKKFLNVYVGHGIKFLPGPFQ 518

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|158540 vs. uniprot

BLAST of jgi.p|Trimin1|158540 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YNL7_9STRA	2.070e-312	100.00	Putative flagellar radial spoke protein 4 n=1 Tax=...	[more]
D7FS43_ECTSI	3.180e-160	62.31	Putative: flagellar radial spoke protein 4 n=2 Tax...	[more]
A0A7S2XZR7_9STRA	4.340e-123	50.62	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S1UB83_9STRA	1.750e-113	50.12	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7S3XSR5_HETAK	3.570e-100	55.92	Hypothetical protein (Fragment) n=1 Tax=Heterosigm...	[more]
A0A7S3M2Q3_9STRA	2.230e-94	45.32	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A2P4XL78_9STRA	8.530e-84	43.17	Flagellar radial spoke protein n=10 Tax=Phytophtho...	[more]
H3GLW4_PHYRM	8.530e-84	43.66	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
D0N4D2_PHYIT	4.600e-83	41.33	Flagellar radial spoke protein, putative n=2 Tax=P...	[more]
A0A662WVF1_9STRA	5.460e-83	43.75	Uncharacterized protein n=2 Tax=Nothophytophthora ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_6	contig	Contig_6:1694649..1700448 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|158540\|e_gw1.6.279.1
BRITE	ko00000,ko04812
KEGG ko	ko:K19756
GOs	GO:0000226,GO:0001534,GO:0001578,GO:0003341,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005856,GO:0005929,GO:0005930,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0031514,GO:0031974,GO:0031981,GO:0032838,GO:0032991,GO:0035082,GO:0042995,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044447,GO:0044463,GO:0044464,GO:0044782,GO:0060271,GO:0070013,GO:0070925,GO:0071840,GO:0097014,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038
Preferred name	RSPH4A
Description	microtubule-based process
COG category	S
Max annot lvl	2759\|Eukaryota
EggNOG OGs	28KDA@1\|root,2QSU4@2759\|Eukaryota
Evalue	5.22e-161
Seed ortholog	2880.D7FS43
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Flagellar radial spoke protein 4
Ec32 ortholog	Ec-16_004420.1
TranscriptId	158862
Track	FilteredModels1
ProteinId	158540

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|158540	gene_2232	Tribonema minus UTEX_B_3156	gene	Contig_6 1694649..1700448 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|158540	Trimin1\|158540\|e_gw1.6.279.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_6 1694649..1700448 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_2232_7	exon_2232_7	Tribonema minus UTEX_B_3156	exon	Contig_6 1694649..1695053 -
exon_2232_6	exon_2232_6	Tribonema minus UTEX_B_3156	exon	Contig_6 1695583..1695855 -
exon_2232_5	exon_2232_5	Tribonema minus UTEX_B_3156	exon	Contig_6 1696455..1696538 -
exon_2232_4	exon_2232_4	Tribonema minus UTEX_B_3156	exon	Contig_6 1697531..1697728 -
exon_2232_3	exon_2232_3	Tribonema minus UTEX_B_3156	exon	Contig_6 1698632..1698718 -
exon_2232_2	exon_2232_2	Tribonema minus UTEX_B_3156	exon	Contig_6 1699227..1699418 -
exon_2232_1	exon_2232_1	Tribonema minus UTEX_B_3156	exon	Contig_6 1700203..1700448 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_2232	CDS_2232	Tribonema minus UTEX_B_3156	CDS	Contig_6 1700203..1700448 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_6:1694649..1700448-
coding sequence from alignment at Contig_6:1694649..1700448-

spliced messenger RNA

>mRNA_2232 ID=mRNA_2232|Name=jgi.p|Trimin1|158540|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1485bp|location=Sequence derived from alignment at Contig_6:1694649..1700448- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACTAGCTTTGAGGAGGCTAGGCAAATACTGCAGAAGGAGAGCACCGA
CGGCGTCTGTTTGTACGACCACCTGGCGGAGGTTGTTCTCAAGGTGCTGT
CGGACAAGCTGCTCGATGGCAGCGAGAGCTTCGAGCACCTCAGTGCTGCT
GTCAAGGAGGCGAGGGCGACTCCTCAGAAGCCGGTGGCGGGAGTGTCCGA
AGCTGCTGCTAGGGCTGCACAGATAAATTGGGCGACCAGCGCGCAGTCTC
TATTCGCCGTCCCAGATGAGCCCCCCGAGGGGGGTCCGCGCGTCCCCGAC
CTCCTGGACGAGGCCAACATGTGGGCCGCAGCGGGAATCAGCTTCGGCGC
CTCGGAAACGTACAGAATTTTCCTGGCGGTGAAGCGCCTCGCGGAGACGC
TCCCCGGCGACCATGAGACGCTGCGGTTCTGGGGCCAGGTGAAGGGCAGG
AGCGCTGACTACCTGGTGGTGGAGGGACGCGCACTGGAGGAGCAGCTGGG
GGACACGGAGGAGGCTGGCATCGAGGGCACGGTCGGCGCCAACCGCTACA
CATATTGGGTGAGCACTGGGGCGGGGGCCCCCTGGACGCAGCTCCCCCCC
GTAACCCCCGCTCAAATCGTGGCGGCGCGCAAGATCCGGCGCTACCTTAC
GGGCGATCTCGACGCGGCAGTGCCGGGCTACCCCCCTTTCCCGGGAACGG
AACGGAACTTTCTTCGCGCTCAGATCGCGCGCATCACCGCGGGCACCGCC
GTGTCCCCCTCCGGCTTCTTCGAGGCGGACGCCGACGCCGACCCCGGTGA
GATCAAGGCCGCGGAAGAGGAGGCGATCAACGAGGCCTTCCCGAAGCCCG
CGAGCGACCTGGCGAGCGCTGACGCGTGGGTCCACCACGAGCTCGAGCTC
AACAAACTCGGCCGCAACCGCCCCCTCCCCGAGCCGGAGGAGGGGGCTGA
GCCCCCTTCAGGCCCGGAAGAGGACCCCCCTGAGGAGGTGCCGCCGCTGA
GGTCGCTGGCGGAGGATGAAGAGGGGGCTTGGGGGTTCAGGACGTCGCCT
GCCGGCGCGGGGGCAACGGCCAACAGCGCGGCCGTCGCCAAGTCCCTCCT
GTGGCCCGGCGCGTACGCGATCGCCGCAGGCAGGCGCGCCACGTGCGTCT
ACGTCGGCCACGCCGTCAAGCACGCCGCCGCCCCCTACGAGCCCCCCGCC
GCGCCGCCGCTGCGCCCTGAGTGGGCCCCCGAGGGCTACGCGGAGGCACT
CGCAGAGGCGACGGCGGCGGCGGCGGCGCGCGCGGAGGCGCGGGCGGAGG
CGGCGGCGGCGGCGGCGGCGGAGGCGGAGGAGAACGGCGAGCCTGCGGCG
GCGCCGGAGCCCGAGGAAGAAGGTGCGTCCCTGTTTGAACTTGGGCGTTG
GATGCTTTTGGAGTTGGGTGTTGAAGTTGGAGTCAGGAAGTGGGTGGAGT
GTGAGATGCTGCAGCGATTGTGTTTGAAGATTTAG

protein sequence of jgi.p|Trimin1|158540

>Trimin1|158540|e_gw1.6.279.1 ID=Trimin1|158540|e_gw1.6.279.1|Name=jgi.p|Trimin1|158540|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=495bp
MTSFEEARQILQKESTDGVCLYDHLAEVVLKVLSDKLLDGSESFEHLSAA
VKEARATPQKPVAGVSEAAARAAQINWATSAQSLFAVPDEPPEGGPRVPD
LLDEANMWAAAGISFGASETYRIFLAVKRLAETLPGDHETLRFWGQVKGR
SADYLVVEGRALEEQLGDTEEAGIEGTVGANRYTYWVSTGAGAPWTQLPP
VTPAQIVAARKIRRYLTGDLDAAVPGYPPFPGTERNFLRAQIARITAGTA
VSPSGFFEADADADPGEIKAAEEEAINEAFPKPASDLASADAWVHHELEL
NKLGRNRPLPEPEEGAEPPSGPEEDPPEEVPPLRSLAEDEEGAWGFRTSP
AGAGATANSAAVAKSLLWPGAYAIAAGRRATCVYVGHAVKHAAAPYEPPA
APPLRPEWAPEGYAEALAEATAAAAARAEARAEAAAAAAAEAEENGEPAA
APEPEEEGASLFELGRWMLLELGVEVGVRKWVECEMLQRLCLKI*

mRNA from alignment at Contig_6:1694649..1700448-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_2232 ID=mRNA_2232|Name=jgi.p|Trimin1|158540|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5800bp|location=Sequence derived from alignment at Contig_6:1694649..1700448- (Tribonema minus UTEX_B_3156 )
ATGACTAGCTTTGAGGAGGCTAGGCAAATACTGCAGAAGGAGAGCACCGA
CGGCGTCTGTTTGTACGACCACCTGGCGGAGGTTGTTCTCAAGGTGCTGT
CGGACAAGCTGCTCGATGGCAGCGAGAGCTTCGAGCACCTCAGTGCTGCT
GTCAAGGAGGCGAGGGCGACTCCTCAGAAGCCGGTGGCGGGAGTGTCCGA
AGCTGCTGCTAGGGCTGCACAGATAAATTGGGCGACCAGCGCGCAGGTGC
GGCACGATTGCACATCATTCGGCTGGTGTGATTCTTGTGGGTTTCTAAGT
GATGTGTCCAGGGCTGTGTCTATGTTAACGTAGCGTGCGAGATGCTGCAG
CCGTAAGTTGGCGCAGCTACTTCCTCTTCAGGCCTCGGATGTGGCTGCTT
GAGGCGGCCACAAACAAAGTGGCAGCCGGTGAGCTACTTCCAGAAACCCA
CACCAACAGCCGCATTTGTGCACGTAGACGCTGTGATCATCTCCAATGTG
TTAGTGCAATTATCTCCCCAAGATATAATTGCTGCTGTATACTCTGTGTA
CTCTTAATCGATCTCATCACTGCAAGGCTTTGCAAATATGCGCCATTGAA
ACTACCAGCCTGAATGCACACTCCACGTGCCTGGGTGGAAAGTGTATGTA
GGCAAGAGCAAATGCAGAAGGGGTACGAAGGGAAAACACCCTGCCTTGAG
CTCACAGGCACCACCATAGTGATGCAAGGGTAGGCGCTGCCATTCATCAT
GCAGACACCTGAACCAAGTAACAGCGCCTTTCGTGCTGTCAACACGATAG
AAACATGTTGCCCGCCTTCCAGCCTGCGCCCACGTGCGTGGGGCTGATTC
ACAGCGGCAACAATTGATGCTGGCCGCTAGGCATCACCGCAGCAGCAGCA
GCGCTCCGTAACGGCGCTCAACATTACCACAGCCTCCTGCAGGCCTTCTT
TGCTGTCCAAGACGCACCAGACTGCATTGAAGCAATTATGGTTGCCTGTA
CCCCCCCCCCCCCCCCCCCCCCCCCTTAAGTCTCTATTCGCCGTCCCAGA
TGAGCCCCCCGAGGGGGGTCCGCGCGTCCCCGACCTCCTGGACGAGGCCA
ACATGTGGGCCGCAGCGGGAATCAGCTTCGGCGCCTCGGAAACGTACAGA
ATTTTCCTGGCGGTGAAGCGCCTCGCGGAGACGCTCCCCGGCGACCATGA
GACGCTGCGGTTCTGGGGCCAGGTGATAAAATTCAAAGTTGCAGGTTGTG
CGCACACTGCTGCTTTATATGAGAGCACCTACTGCGACTCTAATGTTTCT
GATGCGGCATGGAAATACGGCGTTGAGCCTGATTACGCACCAGGTGAAGC
AGCCAGTGCCCCCAACCGGGGGTCTGTTTGGTGCCCCACTGGACCGACGA
GCTTGTACTTGACAGCAGTTTGTGAGCATTTGAATGAAGTCCGCTTGGCA
TGTGAGAGCGCACACCGCAGCGGATGCTGCCGCATTTAGTTCAGTTGGGG
CCCAGTTGCACACCTCACAACAGCCAGTGTGCCCGCTCGGGGGTCTGATT
GGAGCCACATAAAGCTTGTTAACTTGTGTCAGGCAATTCTGCAAGGGAGG
TGGACGTGTGTTCCTGGTCGCAGTATGACGCCCCCCCCCCCCCTCAAAGA
CAAAAACAAGTGCACTGCTGTACTTCAACCCGGTCTCATTGAAGACGCTA
ATGCGCGGATTCTGCTCGTGCCCTGGCCAGGTGAAGGGCAGGAGCGCTGA
CTACCTGGTGGTGGAGGGACGCGCACTGGAGGAGCAGCTGGGGGACACGG
AGGAGGCTGGCATCGAGGTGAGCGCTGACGTCTTCTTCAACAACAACAAC
TTGAAGTGGGGATGGTGTATGTGGAAACTGGAGCGGGGGAAGGGATTTTC
CTTCGTACTGACCTGAAGGGTTTGGGGCGGCAGTGCTAGCGACGAGTGAA
CATGCTTGTGCTATGCAGTCGTTATTGCTGGTGTGTATGTAGCACAATAT
ATTTCAACGGCCTGCTCTGTACATGTATGGCCATGCAGCCTTCTGCAGGC
GCACAGGACTTGTGCATTGAGAAATGCCCGGCGGTATCTTTCAGACCGAT
AGGTGGTCTTGTATTGTTGCATCATCACCGGTTCGGTGTCAGCCATGCAA
AGGCGGTATGTCATAGAGGGTATGATGAACGCGCTCCAAGCGATGATCTG
CAAGTACACACTTCAAGTGATTGAAGTAATATGTGTGGTGCACCAGGTGC
ATTCAAAGGTTTGCAACCTTGTTTGCACAACTACATGGCACCAAAGCATT
CAGAGGTGTCAATGTATTGCAATCCCAATGTTCTGTCATACTTGAAGTTC
CATTTCATATTTGCCATGCACAAAAGACAATGATATACAAATCTTCAAGT
TTGCAGTGTGTGCGATTAGAACCTCGCTGGCATTCGTGATATGCTTAGGG
CTAGGGTGACGGTCAGCGGGCGTGATTGTCTGCAGTCAGTCAGTAACACA
CATGCTGGGCTTGCGCGCAGTGCTAATGCCCGTGCAATGTGTGTACTAGT
GTGTGTGTACTCACAGCACACATGCAAGCTAGCAGCTGAAAGCGAGCGCT
ACCTAGGCTCAGCCAGGCCAGCTACGGTTCCCCCCCCCTCGGCTTTGTAC
CCTGACAAAACCCTCTTATGCAACTCAATGCTCACCGAGAGAAGCGTCCA
ACGTCCATTCACATCTGCAGGGCACGGTCGGCGCCAACCGCTACACATAT
TGGGTGAGCACTGGGGCGGGGGCCCCCTGGACGCAGCTCCCCCCCGTAAC
CCCCGCTCAAATCGTGGCGGCGCGCAAGATCCGGCGCTACCTTACGGGCG
ATCTCGACGCGGCAGTGCCGGGCTACCCCCCTTTCCCGGGAACGGAACGG
AACTTTCTTCGCGCTCAGGTCCGTCCTCATAGTTGATGTTGGTATGGCAG
TAGCACAAGGCAGCAGTAAACTGCAATGTTGGGGTATTAGACTGGAGGTG
ACCTTTGCGTCAGTCGTAGTCTAGCAAGTCAGACTGCTCCTAGCGCAGTC
AACGGAAGAAACGCACCTGGTGCGGACGGTGCTTTTCCCGGAAGAAGGGC
CCAGAGCTTTCTGAGATCGATTCCAGCTCAGGTGCCTGCGCACCAGGCCG
TATCGGTTCTCACGACAGGGTCAGTCTGGCAGTTGAACAGCTGGAGCCCG
CACTGCACGGTCATGCATCAAGAGTAGCAGGTGTGACAGCTGCCGCGTGT
CTCCCCAATACATCATCGCCCATCCGTGCCCGCTCGCATCAGCGTGTGAG
CAGATACTTGAAGTGGATGATACACATTCAAGTATAGCAATCCTACTTGA
AATTCAAATTTGAGTTTAAGCCCAGACAGATTCCAGGTGTTGCACCAGAC
ATGGTGCTGCATATACGCAGCACAACATCTAATTGGTGTGCCCGCTGACT
GCTCATTAGTACCTGATGTTGTCAGTGCCGAGGTCCTGTACCTATGTATT
TTCTGAAGCAGCAGCGACACCTGACTCTGACGTTGAAATATCTAGGGGGG
GGGGGGGGCAGTAATGAGCGCTGATGTGCTGCACCTGTCCCCCTTGCATG
CTCCGCAATGCGCGCATCTTTGCTGTTGAAGTTGAAGTATGTGTGGGGCC
ACTGATGGGCGCTGATGTGCATTGCTCCGCATAATTGTGTGCACCACCGC
TTGTTGAAGTTGAAGTATGTGTGACGCCCCTGATGAGCACTGATGCGCAC
TGCTCCGCAGATGTGCGCATCACCGGCTGCTGTTGATGGTACGTGTGACG
CCCCTGATGAGGACTGATGCGCACTGCTCAGCAGATCTCCCGCATCACCA
TCCGTTGATGTTGGAGTATGTATGACGCACTGACGAGCGCTGATGCGCAC
TGCTCCGCAGATCGCGCGCATCACCGCGGGCACCGCCGTGTCCCCCTCCG
GCTTCTTCGAGGCGGACGCCGACGCCGACCCCGGTGAGATCAAGGTATGT
TGACGTTGAGTCAGCAGCATTTTGAATATTGGCGTGCATTGCTCCCGCAA
GCGTCAGCCTCGACTGCGCCGCGCAGGCGGCGGCACGCGTTCCCGCTGCA
TGCAACAGCTCAATTTCCGCCTTTGGGGGAGCCCGCGCTCTTGGGCGCAA
TGACCGGCGTCGCATTGTCAGATGTGGGCATTGCTGAGCATTGCTGCAGA
ACGCGGTGGCATATAGACTGTGCAAACGGTATTTCTCATGCCCGCTATCA
GCATGACGAGCGCAAACTTGGCGGCATGATTCACAAGCTGTTCGTTGCAT
GTTTGCCCTTCCGCGCTGCTGCCTGCTGATGGCAGTCTAACGGGCCAGCG
ATAAGACTTCAAAGCAGACGCGCTGCGAGTTGACGCCGACTCAGCCGCTC
GGCACCCCGTTGCACTTCCACGGCCCTGAGACCATCACCTGCATACAAAC
ATACACGCGCCCAGATCGCGCGCACAAACTTCAACAAGCACAGACAGCCG
CATTGACCCCACATCCAGCACTGTCCACCAATCAGCCATCGAATCAATGC
CGGCGCCCCTACCGCGACTGCTCACAATCCGTCGTGCACACAGGCCGCGG
AAGAGGAGGCGATCAACGAGGCCTTCCCGAAGCCCGCGAGCGACCTGGCG
AGCGCTGACGCGTGGGTCCACCACGAGCTCGAGCTCAACAAACTCGGCCG
CAACCGCCCCCTCCCCGAGCCGGAGGAGGGGGCTGAGCCCCCTTCAGGCC
CGGAAGAGGACCCCCCTGAGGAGGTGCCGCCGCTGAGGTCGCTGGCGGAG
GATGAAGAGGGGGCTTGGGGGTTCAGGACGTCGCCTGCCGGCGCGGGGGC
AACGGCCAACAGCGCGGTAAGTATGGAGCGAGTTGAAGTTGTATTGAGTC
AGGGTAGGAACGGGGGTTGTGATGTTGAGGTACCATGGGCAACTGAGCAG
GCAATGCACAGTGAATGGCGCAGCCGAAGGCGGCAGGCGCCCGGAGGCGT
GCGTGCACACCAGCTGCAGCTGGCCTCGTCTCATGTACTTAAACATGGAC
GTGCAGCATTGTCGCGCTGAGCTCGAAGGGAGTGTCGCTGTTGTGTAAAC
GACCGCCAGTCAGCTGAGCAAGCACACTTCTCAGTGAGCGTCAACGCTCA
TTAACATACTTTGCAGTCCTCGGGGGCACAAGTTCGTCCTCAACTCGATG
CAAGCGCCGGTACTCCGTGCACAGGCAGCGATGCACCACCGCCTTCAACG
AGCGCCTGCATGAGAGCTCGGCACGCCCCCGCACGCCGCGCCGTCCGTCA
CCGACTTCCTCAAAACCACCTTCAAGAAGTACCTTAACAACATCAGCGCC
CCCGCATACCCCCCCCCCCCCCGGCGCCGCGCGACGCGCGCGCAGGCCGT
CGCCAAGTCCCTCCTGTGGCCCGGCGCGTACGCGATCGCCGCAGGCAGGC
GCGCCACGTGCGTCTACGTCGGCCACGCCGTCAAGCACGCCGCCGCCCCC
TACGAGCCCCCCGCCGCGCCGCCGCTGCGCCCTGAGTGGGCCCCCGAGGG
CTACGCGGAGGCACTCGCAGAGGCGACGGCGGCGGCGGCGGCGCGCGCGG
AGGCGCGGGCGGAGGCGGCGGCGGCGGCGGCGGCGGAGGCGGAGGAGAAC
GGCGAGCCTGCGGCGGCGCCGGAGCCCGAGGAAGAAGGTGCGTCCCTGTT
TGAACTTGGGCGTTGGATGCTTTTGGAGTTGGGTGTTGAAGTTGGAGTCA
GGAAGTGGGTGGAGTGTGAGATGCTGCAGCGATTGTGTTTGAAGATTTAG

Coding sequence (CDS) from alignment at Contig_6:1694649..1700448-

>mRNA_2232 ID=mRNA_2232|Name=jgi.p|Trimin1|158540|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1485bp|location=Sequence derived from alignment at Contig_6:1694649..1700448- (Tribonema minus UTEX_B_3156 )
ATGACTAGCTTTGAGGAGGCTAGGCAAATACTGCAGAAGGAGAGCACCGA
CGGCGTCTGTTTGTACGACCACCTGGCGGAGGTTGTTCTCAAGGTGCTGT
CGGACAAGCTGCTCGATGGCAGCGAGAGCTTCGAGCACCTCAGTGCTGCT
GTCAAGGAGGCGAGGGCGACTCCTCAGAAGCCGGTGGCGGGAGTGTCCGA
AGCTGCTGCTAGGGCTGCACAGATAAATTGGGCGACCAGCGCGCAGTCTC
TATTCGCCGTCCCAGATGAGCCCCCCGAGGGGGGTCCGCGCGTCCCCGAC
CTCCTGGACGAGGCCAACATGTGGGCCGCAGCGGGAATCAGCTTCGGCGC
CTCGGAAACGTACAGAATTTTCCTGGCGGTGAAGCGCCTCGCGGAGACGC
TCCCCGGCGACCATGAGACGCTGCGGTTCTGGGGCCAGGTGAAGGGCAGG
AGCGCTGACTACCTGGTGGTGGAGGGACGCGCACTGGAGGAGCAGCTGGG
GGACACGGAGGAGGCTGGCATCGAGGGCACGGTCGGCGCCAACCGCTACA
CATATTGGGTGAGCACTGGGGCGGGGGCCCCCTGGACGCAGCTCCCCCCC
GTAACCCCCGCTCAAATCGTGGCGGCGCGCAAGATCCGGCGCTACCTTAC
GGGCGATCTCGACGCGGCAGTGCCGGGCTACCCCCCTTTCCCGGGAACGG
AACGGAACTTTCTTCGCGCTCAGATCGCGCGCATCACCGCGGGCACCGCC
GTGTCCCCCTCCGGCTTCTTCGAGGCGGACGCCGACGCCGACCCCGGTGA
GATCAAGGCCGCGGAAGAGGAGGCGATCAACGAGGCCTTCCCGAAGCCCG
CGAGCGACCTGGCGAGCGCTGACGCGTGGGTCCACCACGAGCTCGAGCTC
AACAAACTCGGCCGCAACCGCCCCCTCCCCGAGCCGGAGGAGGGGGCTGA
GCCCCCTTCAGGCCCGGAAGAGGACCCCCCTGAGGAGGTGCCGCCGCTGA
GGTCGCTGGCGGAGGATGAAGAGGGGGCTTGGGGGTTCAGGACGTCGCCT
GCCGGCGCGGGGGCAACGGCCAACAGCGCGGCCGTCGCCAAGTCCCTCCT
GTGGCCCGGCGCGTACGCGATCGCCGCAGGCAGGCGCGCCACGTGCGTCT
ACGTCGGCCACGCCGTCAAGCACGCCGCCGCCCCCTACGAGCCCCCCGCC
GCGCCGCCGCTGCGCCCTGAGTGGGCCCCCGAGGGCTACGCGGAGGCACT
CGCAGAGGCGACGGCGGCGGCGGCGGCGCGCGCGGAGGCGCGGGCGGAGG
CGGCGGCGGCGGCGGCGGCGGAGGCGGAGGAGAACGGCGAGCCTGCGGCG
GCGCCGGAGCCCGAGGAAGAAGGTGCGTCCCTGTTTGAACTTGGGCGTTG
GATGCTTTTGGAGTTGGGTGTTGAAGTTGGAGTCAGGAAGTGGGTGGAGT
GTGAGATGCTGCAGCGATTGTGTTTGAAGATTTAG