mRNA_2059 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|158486
Unique NamemRNA_2059
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|158486 vs. uniprot
Match: A0A836CAF3_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAF3_9STRA)

HSP 1 Score: 639 bits (1647), Expect = 1.300e-230
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 1
Query:    1 MDALRDACPAATVGVGNGTITPPPSHGPTRKALKVGKYILLKTLGKGSSSEVKLAQHSETGEHVAVKVMSKTWIQDNGMTAAVNREITLMSNLKHRNVVELKEVMNSPTSVYMVMELVKGHELYDEIVEQVMLPEPRARKYFRQIVDGIAYLHSQGVVHRDLKPENILVSSDGVIKITDFGLSAMCGRGNSHRRQRSVCGTPYYTAPEVFGGGGARSYDARRADVWSAGIVLFTMLAGQLPFEGNSAEQALDLISTQEVVCPAHFSAEARDLVARMLTKEATTRISLEGVALHPWLMGHKVRVACIVEDTGVLCVXXXXXXXXXXXXXXXXXXXXVCSAHYGSG 1032
            MDALRDACPAATVGVGNGTITPPPSHGPTRKALKVGKYILLKTLGKGSSSEVKLAQHSETGEHVAVKVMSKTWIQDNGMTAAVNREITLMSNLKHRNVVELKEVMNSPTSVYMVMELVKGHELYDEIVEQVMLPEPRARKYFRQIVDGIAYLHSQGVVHRDLKPENILVSSDGVIKITDFGLSAMCGRGNSHRRQRSVCGTPYYTAPEVFGGGGARSYDARRADVWSAGIVLFTMLAGQLPFEGNSAEQALDLISTQEVVCPAHFSAEARDLVARMLTKEATTRISLEGVALHPWLMGHKVRVACIVEDTGVLCVXXXXXXXXXXXXXXXXXXXXVCSAHYGSG
Sbjct:    1 MDALRDACPAATVGVGNGTITPPPSHGPTRKALKVGKYILLKTLGKGSSSEVKLAQHSETGEHVAVKVMSKTWIQDNGMTAAVNREITLMSNLKHRNVVELKEVMNSPTSVYMVMELVKGHELYDEIVEQVMLPEPRARKYFRQIVDGIAYLHSQGVVHRDLKPENILVSSDGVIKITDFGLSAMCGRGNSHRRQRSVCGTPYYTAPEVFGGGGARSYDARRADVWSAGIVLFTMLAGQLPFEGNSAEQALDLISTQEVVCPAHFSAEARDLVARMLTKEATTRISLEGVALHPWLMGHKVRVACIVEDTGVLCVXXXXXXXXXXXXXXXXXXXXVCSAHYGSG 344          
BLAST of jgi.p|Trimin1|158486 vs. uniprot
Match: A0A836C9F6_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9F6_9STRA)

HSP 1 Score: 363 bits (932), Expect = 2.070e-118
Identity = 189/277 (68.23%), Postives = 213/277 (76.90%), Query Frame = 1
Query:   97 LKVGKYILLKTLGKGSSSEVKLAQHSETGEHVAVKVMSKTWIQDNGMTAAVNREITLMSNLKHRNVVELKEVMNSPTSVYMVMELVKGHELYDEIVEQVMLPEPRARKYFRQIVDGIAYLHSQ-----------GVVHRDLKPENILVSSDGVIKITDFGLSAMCGRGNSHRRQRSVCGTPYYTAPEVFGGGGARSYDARRADVWSAGIVLFTMLAGQLPFEGNSAEQALDLISTQEVVCPAHFSAEARDLVARMLTKEATTRISLEGVALHPWLMG 894
            LKVGKYILLKT+G GSSSEVKL Q+S TGE VAVKVMSK WIQ  G+ AAV +EI LMS LKH NVVELKEVMNS T+VYMV+E V+G ELY+EIV   +LPEPRAR YFRQIVDG+AYLHS            G+ HRDLKPEN+L+S DG +KITDFG+SA CG G  HRRQ +VCGTPYYTAPEVF    + SYDARRADVWSAG+VLFTML G+LPFEG S E AL LI+ Q +  PA FS  ARDLV RML K+A  RI+L  VA HP+L G
Sbjct:   17 LKVGKYILLKTIGTGSSSEVKLGQNSHTGEKVAVKVMSKDWIQSRGLAAAVTQEINLMSTLKHPNVVELKEVMNSSTNVYMVLEWVRGRELYEEIVVAGLLPEPRARAYFRQIVDGVAYLHSXXXXXXXXXXXXGIAHRDLKPENVLISRDGQVKITDFGMSATCGSGRGHRRQHTVCGTPYYTAPEVFASTDS-SYDARRADVWSAGVVLFTMLEGRLPFEGASPEDALALIAAQPLAVPARFSPAARDLVQRMLRKDAAARITLSAVARHPFLTG 292          
BLAST of jgi.p|Trimin1|158486 vs. uniprot
Match: A0A2V3IU94_9FLOR (CBL-interacting serine/threonine-protein kinase 26 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU94_9FLOR)

HSP 1 Score: 252 bits (643), Expect = 3.860e-77
Identity = 125/264 (47.35%), Postives = 177/264 (67.05%), Query Frame = 1
Query:  100 KVGKYILLKTLGKGSSSEVKLAQHSETGEHVAVKVMSKTWIQDNGMTAAVNREITLMSNLKHRNVVELKEVMNSPTSVYMVMELVKGHELYDEIVEQVMLPEPRARKYFRQIVDGIAYLHSQGVVHRDLKPENILVSSDGVIKITDFGLSAMCGRGNSHRRQRSVCGTPYYTAPEVFGGGGARSYDARRADVWSAGIVLFTMLAGQLPFEGNSAEQALDLISTQEVVCPAHFSAEARDLVARMLTKEATTRISLEGVALHPWLM 891
            +VG YI+  TLG+G+  +VKLAQH ETG+  A+K++ K+ I+ N +T  V REI +M  L H+N+V L+EV++S + +Y+VM+LV+G EL+D+I ++  L  P ARKYF+Q++DGI Y H +GV HRDLKPEN+LV S+G +KITDFG+S+M G   S     + CGTPYY APE+  G     Y   + D WS GI+LF +L GQLPF+        + I+  +V  P   S +A+DL++R+L K+   R SLE V  HPW +
Sbjct:    4 RVGPYIVTSTLGQGTFGKVKLAQHQETGKEYAIKILDKSDIKANELTVNVRREIAIMKALNHKNIVNLREVLSSKSKLYIVMDLVRGGELFDQIEKKGELEVPAARKYFQQLIDGIDYCHRRGVCHRDLKPENLLVDSNGTLKITDFGVSSMKGVSGSDLLY-TACGTPYYCAPEIINGA-EEGYSGVKIDAWSCGIILFLLLTGQLPFQNEDMALLYEQINRCKVEYPTWMSPDAKDLISRLLEKDPEKRYSLEDVKKHPWFL 265          
BLAST of jgi.p|Trimin1|158486 vs. uniprot
Match: A0A196S7N2_BLAHN (CBL-interacting serine/threonine-protein kinase 9 n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196S7N2_BLAHN)

HSP 1 Score: 243 bits (620), Expect = 1.780e-73
Identity = 124/283 (43.82%), Postives = 179/283 (63.25%), Query Frame = 1
Query:   94 ALKVGKYILLKTLGKGSSSEVKLAQHSETGEHVAVKVMSKTWIQDNGMTAAVNREITLMSNLKHRNVVELKEVMNSPTSVYMVMELVKGHELYDEIVEQVMLPEPRARKYFRQIVDGIAYLHSQGVVHRDLKPENILVSSDGVIKITDFGLSAMCGRG--NSHRRQRSVCGTPYYTAPEVFGGGGARSYDARRADVWSAGIVLFTMLAGQLPFEGNSAEQALDLISTQEVVCPAHFSAEARDLVARMLTKEATTRISLEGVALHPWLMGHKVRVACIVEDTGV 936
            A ++GKY++ KTLG+GS  +VKL+++ ET E VA+KV  K  ++   M   +  EI++M+ LKH N+V L EV+   + ++MV+E V   EL+D I+++  L E  ARK+FRQ++ GI+Y+H+  + HRD+KPEN+L+  D  IKI+DFGLSA  G    +S   Q + CG+P Y APEV    G   Y+ R +D+WS G+VLF M+AG LPF+  S       I     VCP  FSAE +DL++R+L  E T RISL  +  HPW +G+ ++    V  T V
Sbjct:    2 ARRIGKYVIQKTLGEGSLGKVKLSENMETHEQVAIKVFDKEKVKKQNMAEQIKLEISIMNKLKHPNLVNLIEVLGCKSKIFMVLEYVPNGELFDYILKKGRLQEDEARKFFRQLITGISYMHNHNICHRDIKPENLLLDKDMNIKISDFGLSAFIGEDAYDSSSLQHTTCGSPNYVAPEVLKDSG---YNGRFSDIWSCGVVLFVMVAGYLPFDEPSLSTLFRRIQNANYVCPPWFSAELKDLLSRILVPEPTARISLAEITRHPWYLGNDLKAEGAVATTPV 281          
BLAST of jgi.p|Trimin1|158486 vs. uniprot
Match: D2VBQ8_NAEGR (Predicted protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VBQ8_NAEGR)

HSP 1 Score: 237 bits (605), Expect = 1.800e-73
Identity = 118/263 (44.87%), Postives = 169/263 (64.26%), Query Frame = 1
Query:  103 VGKYILLKTLGKGSSSEVKLAQHSETGEHVAVKVMSKTWIQDNGMTAAVNREITLMSNLKHRNVVELKEVMNSPTSVYMVMELVKGHELYDEIVEQVMLPEPRARKYFRQIVDGIAYLHSQGVVHRDLKPENILVSSDGVIKITDFGLSAMC-GRGNSHRRQRSVCGTPYYTAPEVFGGGGARSYDARRADVWSAGIVLFTMLAGQLPFEGNSAEQALDLISTQEV-VCPAHFSAEARDLVARMLTKEATTRISLEGVALHPW 885
            +G+Y L +TLGKG+ S+VK  Q    G   A+K++ +  IQ   + + + REI +M  L HR+V+ L+EV+ SP+++Y+V+ELV G EL+D IV+     E + RKYF Q++ GI Y H QGV HRDLKPEN+L+    V+KI+DFGLSA+C G G+S +   + CGTP Y APEV      + YD ++AD+WS G++L+ ML+G  PF  +S ++    I   E    P +FS++A+DL+ RML      RIS E V  HPW
Sbjct:    1 IGQYQLYQTLGKGNFSKVKYGQDMNDGTTWAIKIIDRKMIQQENLESQLRREIAIMKLLSHRHVIRLREVLQSPSNIYIVLELVTGGELFDRIVKAKRFDECQCRKYFHQLISGIHYCHEQGVSHRDLKPENLLLDDKDVLKISDFGLSALCVGAGDSKKMLTTTCGTPNYVAPEVLM---EKGYDGKKADIWSCGVILYVMLSGHFPFSADSIQELFKKIKNGEYNPFPEYFSSDAKDLIRRMLVVNPDFRISTESVLKHPW 260          
BLAST of jgi.p|Trimin1|158486 vs. uniprot
Match: UPI001E1D357A (CBL-interacting serine/threonine-protein kinase 15-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D357A)

HSP 1 Score: 242 bits (617), Expect = 3.510e-73
Identity = 120/264 (45.45%), Postives = 170/264 (64.39%), Query Frame = 1
Query:  100 KVGKYILLKTLGKGSSSEVKLAQHSETGEHVAVKVMSKTWIQDNGMTAAVNREITLMSNLKHRNVVELKEVMNSPTSVYMVMELVKGHELYDEIVEQVMLPEPRARKYFRQIVDGIAYLHSQGVVHRDLKPENILVSSDGVIKITDFGLSAMCGRGNSHRRQRSVCGTPYYTAPEVFGGGGARSYDARRADVWSAGIVLFTMLAGQLPFEGNSAEQALDLISTQEVVCPAHFSAEARDLVARMLTKEATTRISLEGVALHPWLM 891
            +VG YI+  TLG+G+  +VKLA H ETG+  A+K++ K+ I+ N +T  V REI +M  L H+N+V L+EV++S + +Y+VM+LV+G EL++ I  +  L E  ARKYF+Q+VDGI Y H +GV HRDLKPEN+LV   G +KITDFG+S+M G  +      + CGTPYY APE+  G     Y   + D WS GI+L+ +L G LPF+     Q  + I+  +V  P     +ARDL++ +L K+   R SLE V  HPW +
Sbjct:    4 RVGPYIVTSTLGQGTFGKVKLATHQETGQEYAIKILDKSDIKANELTVNVRREIAIMKALNHKNIVNLREVLSSKSKLYIVMDLVRGGELFEMIERKGELDEKLARKYFQQLVDGIDYCHRRGVCHRDLKPENLLVDEKGTLKITDFGVSSMKGGVSGSDLLYTACGTPYYCAPEIINGA-EEGYSGVKIDAWSCGIILYLLLTGTLPFQNEDMTQLYEQINRCQVDYPNWMPTDARDLISHLLEKDPNKRYSLEDVKRHPWFL 266          
BLAST of jgi.p|Trimin1|158486 vs. uniprot
Match: R7Q7Y3_CHOCR (Serine/threonine protein kinase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7Y3_CHOCR)

HSP 1 Score: 241 bits (616), Expect = 3.870e-73
Identity = 119/264 (45.08%), Postives = 173/264 (65.53%), Query Frame = 1
Query:  100 KVGKYILLKTLGKGSSSEVKLAQHSETGEHVAVKVMSKTWIQDNGMTAAVNREITLMSNLKHRNVVELKEVMNSPTSVYMVMELVKGHELYDEIVEQVMLPEPRARKYFRQIVDGIAYLHSQGVVHRDLKPENILVSSDGVIKITDFGLSAMCGRGNSHRRQRSVCGTPYYTAPEVFGGGGARSYDARRADVWSAGIVLFTMLAGQLPFEGNSAEQALDLISTQEVVCPAHFSAEARDLVARMLTKEATTRISLEGVALHPWLM 891
            +VG YI+  TLG+G+  +VKLAQH ETG   A+K++ K+ I+ N +T  V REI +M  L H N+V L+EV++S T +Y+VM+LV+G EL+++I  +  L E  ARKYF+Q++DG+ Y H +GV HRDLKPEN+LV  +G +KITDFG+S+M G  +      + CGTPYY APE+  G     Y   + D WS GI+LF +L G LPF+     +  + I+  +V  P+   A+A++L+A++L K+   R SLE V  H W +
Sbjct:    4 RVGPYIVTSTLGQGTFGKVKLAQHQETGIEYAIKILDKSDIKANELTVNVRREIAIMKALNHNNIVNLREVLSSKTKLYIVMDLVRGGELFEQIERRGELDEKLARKYFQQLIDGVDYCHRRGVCHRDLKPENLLVDENGTLKITDFGVSSMKGGVSGSDLLYTACGTPYYCAPEIINGA-EEGYSGVKIDAWSCGIILFLLLTGTLPFQNEDMTKLYEQINRCKVEYPSWMPADAKNLIAQLLEKDPDKRYSLENVKGHSWFL 266          
BLAST of jgi.p|Trimin1|158486 vs. uniprot
Match: A0A7S3A9K4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A9K4_9RHOD)

HSP 1 Score: 241 bits (616), Expect = 7.020e-73
Identity = 120/263 (45.63%), Postives = 173/263 (65.78%), Query Frame = 1
Query:  100 KVGKYILLKTLGKGSSSEVKLAQHSETGEHVAVKVMSKTWIQDNGMTAAVNREITLMSNLKHRNVVELKEVMNSPTSVYMVMELVKGHELYDEIVEQVMLPEPRARKYFRQIVDGIAYLHSQGVVHRDLKPENILVS-SDGVIKITDFGLSAMCGRGNSHRRQRSVCGTPYYTAPEVFGGGGARSYDARRADVWSAGIVLFTMLAGQLPFEGNSAEQALDLISTQEVVCPAHFSAEARDLVARMLTKEATTRISLEGVALHPW 885
            +VGKY+L +TLG GS  +VKL  H ETG+ VA+K+M K  I+ + M A V REI +M  L+HRN+V L++V+ S   +Y+VM+LV G EL+ +I +   LPEP ARKYF+++VDG++Y HS+GV HRDLKPEN+L+  + G +KITDFGLS M G   +     ++CG+P Y APE+  G     Y   + D W+ GIVLF +L G LPF  ++ +    +I+TQ    P++ S +A+ L   +L K+   R+++E V  HPW
Sbjct:    4 RVGKYLLFETLGTGSFGKVKLGVHEETGDRVAIKIMDKGDIKAHEMAANVRREIAIMKALEHRNIVNLRQVLTSANKLYIVMDLVTGGELFTKIYKHGALPEPLARKYFQELVDGVSYCHSKGVYHRDLKPENLLIDEATGSLKITDFGLSTMVGANTADDLLHTMCGSPNYCAPEIISGS-KTGYSGAKVDSWACGIVLFALLTGYLPFYDDNQKTLYRMIATQPPKFPSNMSEDAKHLTNLLLNKDPNRRVTVEAVKEHPW 265          
BLAST of jgi.p|Trimin1|158486 vs. uniprot
Match: A0A1X6NPE7_PORUM (Protein kinase domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NPE7_PORUM)

HSP 1 Score: 248 bits (633), Expect = 1.610e-72
Identity = 129/282 (45.74%), Postives = 176/282 (62.41%), Query Frame = 1
Query:   46 GNGTITPPPSHGPTRKALKVGKYILLKTLGKGSSSEVKLAQHSETGEHVAVKVMSKTWIQDNGMTAAVNREITLMSNLKHRNVVELKEVMNSPTSVYMVMELVKGHELYDEIVEQVMLPEPRARKYFRQIVDGIAYLHSQGVVHRDLKPENILVSSDGVIKITDFGLSAMCGRGNSHRRQRSVCGTPYYTAPEVFGGGGARSYDARRADVWSAGIVLFTMLAGQLPFEGNSAEQALDLISTQEVVCPAHFSAEARDLVARMLTKEATTRISLEGVALHPWLM 891
            G GT  PPP    T+   KVGKYILL T+G+GS  +VKL  H ETG   AVK+M+K+ I    +T  V RE+ +M  L+HRN+V L EV+ S   +Y+VMELV G EL+D I ++  L EP  R YF+Q+V GI Y H + V HRDLKPEN+++S DG +KI DFGLS++    +      +VCGTP+YT+PEV        YD  + DVWS+GI+L+ ML G LPF+ +S     D I   +++ P+H S   +++++ ML K+   R S   V  HPW M
Sbjct:   29 GRGT-PPPPQPDATKSMFKVGKYILLDTVGEGSFGKVKLGMHEETGVRYAVKIMAKSRISTASLTIQVRREVAVMKALRHRNIVRLYEVLTSSKHIYLVMELVTGGELFDIISDRGRLSEPDGRVYFQQLVCGIDYCHRRLVYHRDLKPENLMLSEDGALKIVDFGLSSIKSANSGTELLHTVCGTPHYTSPEVITSA-KEGYDGAKFDVWSSGIILYGMLCGFLPFDEDSERALYDAIVKDQLIFPSHLSTGVKEVLSGMLEKDPDVRWSFADVKKHPWFM 308          
BLAST of jgi.p|Trimin1|158486 vs. uniprot
Match: CIPKO_ARATH (CBL-interacting serine/threonine-protein kinase 24 n=15 Tax=Brassicaceae TaxID=3700 RepID=CIPKO_ARATH)

HSP 1 Score: 239 bits (611), Expect = 4.010e-72
Identity = 121/281 (43.06%), Postives = 182/281 (64.77%), Query Frame = 1
Query:   85 TRKALKVGKYILLKTLGKGSSSEVKLAQHSETGEHVAVKVMSKTWIQDNGMTAAVNREITLMSNLKHRNVVELKEVMNSPTSVYMVMELVKGHELYDEIVEQVMLPEPRARKYFRQIVDGIAYLHSQGVVHRDLKPENILVSSDGVIKITDFGLSAMCGRGNSHRRQRSVCGTPYYTAPEVFGGGGARSYDARRADVWSAGIVLFTMLAGQLPFEGNSAEQALDLISTQEVVCPAHFSAEARDLVARMLTKEATTRISLEGVALHPWLMGHKVRVACIVED 927
            T+K  +VGKY + +T+G+G+ ++VK A++++TG++VA+K+M+K+ I  N M   + REI++M  ++H N+V L EV+ SP+ +Y+V+E V G EL+D IV +  L E  +RKYF+Q+VD +A+ H +GV HRDLKPEN+L+ ++G +K++DFGLSA+   G      R+ CGTP Y APEV  G G   YD   AD+WS G++LF +LAG LPF           I+  E  CP  FSAE + L+ R+L     TRI ++G+   PW   + V +    E+
Sbjct:    2 TKKMRRVGKYEVGRTIGEGTFAKVKFARNTDTGDNVAIKIMAKSTILKNRMVDQIKREISIMKIVRHPNIVRLYEVLASPSKIYIVLEFVTGGELFDRIVHKGRLEESESRKYFQQLVDAVAHCHCKGVYHRDLKPENLLLDTNGNLKVSDFGLSALPQEGVE--LLRTTCGTPNYVAPEVLSGQG---YDGSAADIWSCGVILFVILAGYLPFSETDLPGLYRKINAAEFSCPPWFSAEVKFLIHRILDPNPKTRIQIQGIKKDPWFRLNYVPIRAREEE 277          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158486 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAF3_9STRA1.300e-230100.00Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A836C9F6_9STRA2.070e-11868.23Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A2V3IU94_9FLOR3.860e-7747.35CBL-interacting serine/threonine-protein kinase 26... [more]
A0A196S7N2_BLAHN1.780e-7343.82CBL-interacting serine/threonine-protein kinase 9 ... [more]
D2VBQ8_NAEGR1.800e-7344.87Predicted protein (Fragment) n=1 Tax=Naegleria gru... [more]
UPI001E1D357A3.510e-7345.45CBL-interacting serine/threonine-protein kinase 15... [more]
R7Q7Y3_CHOCR3.870e-7345.08Serine/threonine protein kinase n=1 Tax=Chondrus c... [more]
A0A7S3A9K4_9RHOD7.020e-7345.63Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1X6NPE7_PORUM1.610e-7245.74Protein kinase domain-containing protein n=1 Tax=P... [more]
CIPKO_ARATH4.010e-7243.06CBL-interacting serine/threonine-protein kinase 24... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_6contigContig_6:182618..184960 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|158486|e_gw1.6.252.1
BRITEko00000,ko00001,ko01000,ko01001,ko03029,ko04131
KEGG Pathwayko04068,ko04140,ko04150,ko04151,ko04152,ko04211,ko04213,ko04371,ko04530,ko04710,ko04714,ko04910,ko04920,ko04921,ko04922,ko04931,ko04932,ko05410,ko05418,map04068,map04140,map04150,map04151,map04152,map04211,map04213,map04371,map04530,map04710,map04714,map04910,map04920,map04921,map04922,map04931,map04932,map05410,map05418
KEGG koko:K07198
EC2.7.11.11
GOsGO:0000325,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006970,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009628,GO:0009651,GO:0009705,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0023052,GO:0031090,GO:0035556,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0098588,GO:0098805,GO:0140096,GO:1901564
Preferred nameSOS2
DescriptionNon-specific serine threonine protein kinase
COG categoryT
Max annot lvl35493|Streptophyta
EggNOG OGsKOG0583@1|root,KOG0583@2759|Eukaryota,37I6U@33090|Viridiplantae,3GAMQ@35493|Streptophyta,3HT3Q@3699|Brassicales
Evalue1.29e-74
Seed ortholog3711.Bra025613.1-P
Hectar predicted targeting categoryother localisation
TranscriptId158808
TrackFilteredModels1
ProteinId158486
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158486gene_2059Tribonema minus UTEX_B_3156 geneContig_6 182618..184960 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_2059_1exon_2059_1Tribonema minus UTEX_B_3156 exonContig_6 182618..182826 +
exon_2059_2exon_2059_2Tribonema minus UTEX_B_3156 exonContig_6 183772..184027 +
exon_2059_3exon_2059_3Tribonema minus UTEX_B_3156 exonContig_6 184391..184960 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_2059CDS_2059Tribonema minus UTEX_B_3156 CDSContig_6 182618..182826 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158486Trimin1|158486|e_gw1.6.252.1Tribonema minus UTEX_B_3156 polypeptideContig_6 182618..184960 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_2059 ID=mRNA_2059|Name=jgi.p|Trimin1|158486|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1035bp|location=Sequence derived from alignment at Contig_6:182618..184960+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGACGCTCTGCGGGATGCCTGTCCCGCAGCTACAGTTGGCGTGGGTAA
TGGCACGATCACACCTCCGCCCTCGCATGGTCCCACACGGAAAGCACTCA
AAGTCGGCAAATACATTCTGCTGAAGACGCTGGGTAAGGGGAGCAGCAGC
GAGGTGAAACTGGCGCAGCACAGCGAGACAGGGGAACACGTAGCTGTCAA
GGTCATGAGCAAGACGTGGATACAGGACAACGGCATGACGGCCGCAGTGA
ACCGTGAGATCACACTCATGTCCAACCTCAAGCACCGCAACGTGGTGGAG
CTGAAGGAGGTGATGAACAGCCCCACCAGCGTGTACATGGTCATGGAGCT
CGTCAAGGGGCACGAGCTGTACGACGAGATAGTGGAGCAGGTGATGCTCC
CGGAGCCGCGTGCGCGCAAGTACTTCCGCCAGATCGTCGACGGCATCGCG
TACCTGCACTCGCAGGGAGTGGTGCACCGCGATTTAAAGCCCGAGAACAT
CCTGGTCTCCTCCGACGGCGTCATCAAAATCACCGACTTTGGCCTGTCCG
CCATGTGCGGCCGCGGCAACAGCCATCGGCGCCAGCGCTCAGTCTGCGGC
ACGCCCTACTACACCGCGCCGGAAGTTTTTGGTGGCGGCGGCGCGCGCAG
CTACGATGCACGCCGCGCAGACGTATGGTCCGCCGGCATCGTTCTTTTCA
CCATGCTCGCGGGGCAGCTGCCGTTTGAGGGGAACTCGGCGGAGCAGGCG
CTGGATTTAATTTCGACGCAGGAGGTCGTGTGCCCGGCGCACTTCAGTGC
CGAGGCGCGGGATCTGGTCGCGCGCATGCTTACCAAGGAGGCCACCACGC
GCATATCGCTGGAGGGGGTCGCGCTGCACCCGTGGCTCATGGGGCACAAG
GTGAGGGTGGCGTGTATTGTAGAGGACACGGGTGTACTGTGTGTAGAGGA
CATGGGTGTACTCTGTGTAGAGGACACGGGTCTAGTCTGTGTAGAGCACA
CGGGTGTGTGCTCTGCGCACTATGGATCAGGATGA
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protein sequence of jgi.p|Trimin1|158486

>Trimin1|158486|e_gw1.6.252.1 ID=Trimin1|158486|e_gw1.6.252.1|Name=jgi.p|Trimin1|158486|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=345bp
MDALRDACPAATVGVGNGTITPPPSHGPTRKALKVGKYILLKTLGKGSSS
EVKLAQHSETGEHVAVKVMSKTWIQDNGMTAAVNREITLMSNLKHRNVVE
LKEVMNSPTSVYMVMELVKGHELYDEIVEQVMLPEPRARKYFRQIVDGIA
YLHSQGVVHRDLKPENILVSSDGVIKITDFGLSAMCGRGNSHRRQRSVCG
TPYYTAPEVFGGGGARSYDARRADVWSAGIVLFTMLAGQLPFEGNSAEQA
LDLISTQEVVCPAHFSAEARDLVARMLTKEATTRISLEGVALHPWLMGHK
VRVACIVEDTGVLCVEDMGVLCVEDTGLVCVEHTGVCSAHYGSG*
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mRNA from alignment at Contig_6:182618..184960+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_2059 ID=mRNA_2059|Name=jgi.p|Trimin1|158486|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2343bp|location=Sequence derived from alignment at Contig_6:182618..184960+ (Tribonema minus UTEX_B_3156 )
ATGGACGCTCTGCGGGATGCCTGTCCCGCAGCTACAGTTGGCGTGGGTAA TGGCACGATCACACCTCCGCCCTCGCATGGTCCCACACGGAAAGCACTCA AAGTCGGCAAATACATTCTGCTGAAGACGCTGGGTAAGGGGAGCAGCAGC GAGGTGAAACTGGCGCAGCACAGCGAGACAGGGGAACACGTAGCTGTCAA GGTCATGAGGTGCGTGGGGCAGAGCTGAGCACACATCCTTGCAAATCGAA CATCGAAGCTTCGGGAAGCGTGCTTCGCATCATGACGCGTGCATGCCGCC ACACAACGGGATGTGTCTATAGTAGTGCACTGTGTGTCTCAGTCATGCAT CTACTCGCGCTGTAGCACAGCTGATCAACAGTGGACGTTGCCAAGCTCCG AAGGCAGTGTCAAATTAGGGCCCATGACATGGTTGCTGTGTGTTGGCAAA GACGGGTTTCAGGCTGACGAGATGGGTTGCGCTTGTGAATGCATACACGC GAGGTGCGGCAGCTTGTGTAAGTATACCGAATCCATCCCATCCTGGTAAG ACGTAGACCTGTTGTCATCACATGCCGGTTGCTGCTCTCAGACTGGCAGT GTCAATTAGCCAGGATGCCGTCAACCTTGCGAGCTGACAGGGACCAGGAG CTTCCGTATGTCGTCCCCCAGTTGCGTGTCCTTACATTGCCGCACTGCCT GCACATGTGTCTCGGCACATATTCGTACCACATTATCACTGCGGACTTGA GTGCTCATGTCTCATTCGGGGGCGCATGGCGGCCGGCCATGGCGATCGCA CAGTGCTGGGGCAGCGCGACAATGATAAAACGTAGTCACGGACGAGAGCA GGTCCCCGTTTCTTGTGCAGCCACACGCAGAGCACTGTAATTTTCACAGT GTTATGGGATGAGCGGGGAGGACTCGCTGACAGGGTGCGGCCACCACAGT TTTTAAGCACTGTAGCTGCCATGTGCAAGGTGGTCATTACCAGTGTGGGT CATTGCCACTTGGACCCCCCGAACGCTTGCTTGAAGCAGCAGTGCACCAG CCACACACACGCGGAGCATGAGTCCCCATGCTGCAGTCACTGAGCACAGA AAGGCAACCGCCCTGTAACCGCCCTGTATAACTGCCGTTCTCGGCGCGCT GCAGCAAGACGTGGATACAGGACAACGGCATGACGGCCGCAGTGAACCGT GAGATCACACTCATGTCCAACCTCAAGCACCGCAACGTGGTGGAGCTGAA GGAGGTGATGAACAGCCCCACCAGCGTGTACATGGTCATGGAGCTCGTCA AGGGGCACGAGCTGTACGACGAGATAGTGGAGCAGGTGATGCTCCCGGAG CCGCGTGCGCGCAAGTACTTCCGCCAGATCGTCGACGGCATCGCGTACCT GCACTCGCAGGTGAGAGAGCGCAGCATCATATGCATGGTGCCGAGCGCCA AGCTATGTGTTTGTTGATGTGTGTCGTCCGTAGTCTGCTGCCTGAGCATG AGGTGTGGCAAACGTGATCGGAGATGTGCTGAGTGTGACTTGCAGTGCAC CCAAGTACAACTGCATGGCGCCGTCTGGCCCTCGATGCACACACAAAACA AGAAGGCTGCGATCCAGTCCGCGCGGAAGGCACGATTGCCCACTCTACAA TCACACTCAGCTGAATGCAAAATACTGCTCCCTCTGACCCCCACCTGCTC CATGTACCTCACTGTCACCCTCATCCCCCCCCCCCCCCCCCTCTGCTGTT CACATCAATTGCCATGTCCCCAGGGAGTGGTGCACCGCGATTTAAAGCCC GAGAACATCCTGGTCTCCTCCGACGGCGTCATCAAAATCACCGACTTTGG CCTGTCCGCCATGTGCGGCCGCGGCAACAGCCATCGGCGCCAGCGCTCAG TCTGCGGCACGCCCTACTACACCGCGCCGGAAGTTTTTGGTGGCGGCGGC GCGCGCAGCTACGATGCACGCCGCGCAGACGTATGGTCCGCCGGCATCGT TCTTTTCACCATGCTCGCGGGGCAGCTGCCGTTTGAGGGGAACTCGGCGG AGCAGGCGCTGGATTTAATTTCGACGCAGGAGGTCGTGTGCCCGGCGCAC TTCAGTGCCGAGGCGCGGGATCTGGTCGCGCGCATGCTTACCAAGGAGGC CACCACGCGCATATCGCTGGAGGGGGTCGCGCTGCACCCGTGGCTCATGG GGCACAAGGTGAGGGTGGCGTGTATTGTAGAGGACACGGGTGTACTGTGT GTAGAGGACATGGGTGTACTCTGTGTAGAGGACACGGGTCTAGTCTGTGT AGAGCACACGGGTGTGTGCTCTGCGCACTATGGATCAGGATGA
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Coding sequence (CDS) from alignment at Contig_6:182618..184960+

>mRNA_2059 ID=mRNA_2059|Name=jgi.p|Trimin1|158486|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1035bp|location=Sequence derived from alignment at Contig_6:182618..184960+ (Tribonema minus UTEX_B_3156 )
ATGGACGCTCTGCGGGATGCCTGTCCCGCAGCTACAGTTGGCGTGGGTAA
TGGCACGATCACACCTCCGCCCTCGCATGGTCCCACACGGAAAGCACTCA
AAGTCGGCAAATACATTCTGCTGAAGACGCTGGGTAAGGGGAGCAGCAGC
GAGGTGAAACTGGCGCAGCACAGCGAGACAGGGGAACACGTAGCTGTCAA
GGTCATGAGCAAGACGTGGATACAGGACAACGGCATGACGGCCGCAGTGA
ACCGTGAGATCACACTCATGTCCAACCTCAAGCACCGCAACGTGGTGGAG
CTGAAGGAGGTGATGAACAGCCCCACCAGCGTGTACATGGTCATGGAGCT
CGTCAAGGGGCACGAGCTGTACGACGAGATAGTGGAGCAGGTGATGCTCC
CGGAGCCGCGTGCGCGCAAGTACTTCCGCCAGATCGTCGACGGCATCGCG
TACCTGCACTCGCAGGGAGTGGTGCACCGCGATTTAAAGCCCGAGAACAT
CCTGGTCTCCTCCGACGGCGTCATCAAAATCACCGACTTTGGCCTGTCCG
CCATGTGCGGCCGCGGCAACAGCCATCGGCGCCAGCGCTCAGTCTGCGGC
ACGCCCTACTACACCGCGCCGGAAGTTTTTGGTGGCGGCGGCGCGCGCAG
CTACGATGCACGCCGCGCAGACGTATGGTCCGCCGGCATCGTTCTTTTCA
CCATGCTCGCGGGGCAGCTGCCGTTTGAGGGGAACTCGGCGGAGCAGGCG
CTGGATTTAATTTCGACGCAGGAGGTCGTGTGCCCGGCGCACTTCAGTGC
CGAGGCGCGGGATCTGGTCGCGCGCATGCTTACCAAGGAGGCCACCACGC
GCATATCGCTGGAGGGGGTCGCGCTGCACCCGTGGCTCATGGGGCACAAG
GTGAGGGTGGCGTGTATTGTAGAGGACACGGGTGTACTGTGTGTAGAGGA
CATGGGTGTACTCTGTGTAGAGGACACGGGTCTAGTCTGTGTAGAGCACA
CGGGTGTGTGCTCTGCGCACTATGGATCAGGATGA
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