mRNA_955 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|142835
Unique NamemRNA_955
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: A0A835ZKV5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKV5_9STRA)

HSP 1 Score: 266 bits (680), Expect = 4.240e-90
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 1
Query:    1 RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 411
            RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL
Sbjct:    1 RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 137          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: A0A6H5KP27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP27_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 2.400e-55
Identity = 98/137 (71.53%), Postives = 120/137 (87.59%), Query Frame = 1
Query:    1 RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 411
            RRRS I ETA++L+ALVKQ V+TLAFCRTRKLTEL L+Y  +DLE +AP LV  V+GYRGGYTK +RR+IEG LF+ KLLGVTAT ALELG+D+G+LDVT+HLG+PGSVSSL QQAGRAGRGG++SLAI+++F  P+
Sbjct:  864 RRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLEKTAPQLVPLVQGYRGGYTKDERRKIEGSLFANKLLGVTATCALELGVDIGELDVTLHLGFPGSVSSLRQQAGRAGRGGKDSLAIMVLFQDPI 1000          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: A0A7R9UET8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UET8_9STRA)

HSP 1 Score: 185 bits (470), Expect = 1.040e-54
Identity = 93/135 (68.89%), Postives = 112/135 (82.96%), Query Frame = 1
Query:    7 RSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 411
            RS+IVETA V +AL+KQ VRTLAFCR RKL ELVL+Y  +DL  +AP L   V+GYRGGY+K +RREIE +LF GKLLGVTA++ALELG+D+G LDVT+HLG+PGS+SSL QQ GRAGR G  SLAI+I+F SPL
Sbjct:  165 RSAIVETAMVFTALIKQRVRTLAFCRVRKLVELVLRYSLQDLAATAPRLARRVRGYRGGYSKAERREIEAQLFGGKLLGVTASNALELGVDIGSLDVTVHLGFPGSISSLRQQMGRAGRTGGQSLAIIILFPSPL 299          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: D8LLG5_ECTSI (DEAD/DEAH box helicase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG5_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 3.000e-54
Identity = 96/137 (70.07%), Postives = 119/137 (86.86%), Query Frame = 1
Query:    1 RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 411
            RRRS I ETA++L+ALVKQ V+TLAFCRTRKLTEL L+Y  +DL  +AP +V  V+GYRGGYTK +RR+IEG LF+ KLLGVTAT ALELG+D+G+LDVT+HLG+PGSVSSL QQAGRAGRGG++SLAI+++F  P+
Sbjct:  484 RRRSPICETAQILAALVKQRVKTLAFCRTRKLTELTLRYGHQDLGKTAPQMVPLVQGYRGGYTKDERRKIEGSLFANKLLGVTATCALELGVDIGELDVTLHLGFPGSVSSLRQQAGRAGRGGKDSLAIMVLFQDPI 620          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: A0A7S1UKF1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKF1_9STRA)

HSP 1 Score: 182 bits (462), Expect = 3.820e-51
Identity = 90/137 (65.69%), Postives = 112/137 (81.75%), Query Frame = 1
Query:    1 RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 411
            R RS+IVETA + +AL+KQ VRTLAFCR RKL ELVL+Y  +DL  +AP L + V+GYRGGY+K DRREIE +LF G LLGVTA+SALELG+D+G LD T+HLG+PGS+S L QQ GRAGR GR S+A++++F SPL
Sbjct:  160 RPRSAIVETAMLFTALIKQRVRTLAFCRVRKLVELVLRYSLQDLAATAPRLAQRVRGYRGGYSKKDRREIERRLFGGDLLGVTASSALELGVDIGSLDATLHLGFPGSISGLRQQMGRAGRSGRPSMAVVVLFQSPL 296          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: A0A7S2AHE3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AHE3_9STRA)

HSP 1 Score: 167 bits (422), Expect = 2.030e-49
Identity = 82/121 (67.77%), Postives = 99/121 (81.82%), Query Frame = 1
Query:   49 VKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 411
            VK+ VRT+AF RTRKLTELVL+Y  +DL  +AP LV+ VK YRGGYTK DRR IE +LF G+LLGV AT ALELG+D+G LD T+H+G+P  +SSLWQQAGRAGR GR SLA+++ FDSPL
Sbjct:    1 VKRRVRTIAFSRTRKLTELVLRYTLQDLTATAPGLVKFVKSYRGGYTKEDRRAIEAQLFQGQLLGVAATCALELGVDIGGLDATLHVGFPSPLSSLWQQAGRAGRSGRRSLAVVVAFDSPL 121          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: F2TYE6_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TYE6_SALR5)

HSP 1 Score: 174 bits (441), Expect = 8.250e-48
Identity = 87/134 (64.93%), Postives = 110/134 (82.09%), Query Frame = 1
Query:   10 SSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 411
            S+I++ A +LSALVKQHVRTLAF + RK+TELVLKY   DL+ +AP LV  VK YR GYTK +RR IE  LF+GK+LG TAT+ALELG+D+G LD TI LG+PGS++S+WQQAGR+GRG  ++L ILI+F+SPL
Sbjct:  694 SAILQAALILSALVKQHVRTLAFAKVRKVTELVLKYTRHDLKHTAPQLVARVKSYRAGYTKEERRAIERALFAGKILGTTATNALELGVDIGSLDATILLGFPGSIASMWQQAGRSGRGTHDALTILILFNSPL 827          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: A0A7C9DFS4_OPUST (Helicase C-terminal domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9DFS4_OPUST)

HSP 1 Score: 157 bits (397), Expect = 7.130e-47
Identity = 75/134 (55.97%), Postives = 104/134 (77.61%), Query Frame = 1
Query:   10 SSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 411
            S I+E + +L+ +V+  +R++AFC+TRKL ELVL Y  E L+ + PHL++++  YR GY   DRR IE + FSGKL G+ AT+ALELGID+G +DVT+HLG+PGSV+SLWQQAGR+GR G+ SLA+ + F+ PL
Sbjct:    4 SPILEVSLLLAEMVQHGLRSIAFCKTRKLCELVLSYTREILQDTTPHLMDSICAYRAGYVPEDRRRIESEFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSVASLWQQAGRSGRRGKPSLAVYVAFEGPL 137          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: A0A0J8CFE5_BETVV (Uncharacterized protein n=3 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8CFE5_BETVV)

HSP 1 Score: 162 bits (410), Expect = 1.230e-43
Identity = 79/137 (57.66%), Postives = 107/137 (78.10%), Query Frame = 1
Query:    1 RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 411
            +R S I+E +R+L+ +V+  +R++AFC+TRKL ELVL Y  E L+ +APHLV ++  YR GY   DRR IE + FSGKL G+ ATSALELGID+G +DVT+HLG+PGS++SLWQQAGR+GR G+ SLA+ + F+ PL
Sbjct:  695 KRSSPILEVSRLLAEMVQHGLRSIAFCKTRKLCELVLSYTHEVLQDTAPHLVNSICAYRAGYIAEDRRRIESEFFSGKLRGIAATSALELGIDVGHVDVTLHLGFPGSIASLWQQAGRSGRRGKPSLAVYVAFEGPL 831          
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Match: UPI000B76DBD5 (uncharacterized protein LOC110722235 n=4 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B76DBD5)

HSP 1 Score: 161 bits (408), Expect = 2.290e-43
Identity = 77/137 (56.20%), Postives = 106/137 (77.37%), Query Frame = 1
Query:    1 RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPHLVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVTIHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL 411
            +R S I+E +++ + +V+  +R +AFC+TRKL E+VL Y  E L+ +APHL +++  YRGGY   DRR IE + FSGKL G+ AT+ALELGID+G +DVT+HLG+PGS+SSLWQQAGR+GR G+ SLA+ + FD PL
Sbjct:  693 KRSSPILEVSQLFAEMVQHGLRCIAFCKTRKLCEVVLSYTHEILQDTAPHLTDSICAYRGGYVAEDRRRIESEFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSISSLWQQAGRSGRRGKPSLAVYVAFDGPL 829          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|142835 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZKV5_9STRA4.240e-90100.00P-loop containing nucleoside triphosphate hydrolas... [more]
A0A6H5KP27_9PHAE2.400e-5571.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7R9UET8_9STRA1.040e-5468.89Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
D8LLG5_ECTSI3.000e-5470.07DEAD/DEAH box helicase domain-containing protein n... [more]
A0A7S1UKF1_9STRA3.820e-5165.69Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2AHE3_9STRA2.030e-4967.77Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
F2TYE6_SALR58.250e-4864.93Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A7C9DFS4_OPUST7.130e-4755.97Helicase C-terminal domain-containing protein (Fra... [more]
A0A0J8CFE5_BETVV1.230e-4357.66Uncharacterized protein n=3 Tax=Beta vulgaris subs... [more]
UPI000B76DBD52.290e-4356.20uncharacterized protein LOC110722235 n=4 Tax=Cheno... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_1contigContig_1:227518..229645 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|142835|gw1.1.159.1
BRITEko00000
KEGG koko:K06877
GOsGO:0000166,GO:0000217,GO:0000405,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0031974,GO:0031981,GO:0032392,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034644,GO:0035639,GO:0035861,GO:0036094,GO:0036297,GO:0042623,GO:0043138,GO:0043140,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070013,GO:0070035,GO:0070914,GO:0071103,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0090304,GO:0090734,GO:0097159,GO:0097367,GO:0104004,GO:0140097,GO:0140098,GO:1901255,GO:1901265,GO:1901360,GO:1901363
Descriptionnucleotide-excision repair involved in interstrand cross-link repair
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1205@1|root,KOG4150@2759|Eukaryota
Evalue4.91e-55
Seed ortholog2880.D8LLG5
Hectar predicted targeting categoryother localisation
TranscriptId143157
TrackFilteredModels1
ProteinId142835
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|142835gene_955Tribonema minus UTEX_B_3156 geneContig_1 227518..229645 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_955_1exon_955_1Tribonema minus UTEX_B_3156 exonContig_1 227518..227709 +
exon_955_2exon_955_2Tribonema minus UTEX_B_3156 exonContig_1 228373..228490 +
exon_955_3exon_955_3Tribonema minus UTEX_B_3156 exonContig_1 229545..229645 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_955CDS_955Tribonema minus UTEX_B_3156 CDSContig_1 227518..227709 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|142835Trimin1|142835|gw1.1.159.1Tribonema minus UTEX_B_3156 polypeptideContig_1 227518..229645 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_955 ID=mRNA_955|Name=jgi.p|Trimin1|142835|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=411bp|location=Sequence derived from alignment at Contig_1:227518..229645+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGCCGGCGCAGCTCCATTGTGGAGACAGCGCGCGTGCTGAGCGCGCTGGT
GAAGCAGCACGTGCGCACGCTGGCGTTCTGCCGCACGCGCAAGCTCACGG
AGCTCGTGCTCAAGTACTGCACGGAGGACCTGGAGTGCAGCGCGCCGCAC
CTGGTGGAGGCCGTCAAGGGGTACAGGGGGGGGTACACCAAGGGGGATCG
GCGAGAGATTGAGGGCAAGCTCTTCAGCGGCAAGCTGCTGGGCGTAACTG
CCACCAGCGCACTTGAGCTTGGCATCGATCTCGGCGATCTGGACGTCACA
ATCCATCTCGGCTATCCGGGATCGGTGAGCAGCCTGTGGCAGCAAGCGGG
GCGCGCTGGCCGCGGCGGCCGCAACTCTCTGGCCATTCTCATCATGTTTG
ACTCGCCGCTC
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protein sequence of jgi.p|Trimin1|142835

>Trimin1|142835|gw1.1.159.1 ID=Trimin1|142835|gw1.1.159.1|Name=jgi.p|Trimin1|142835|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=137bp
RRRSSIVETARVLSALVKQHVRTLAFCRTRKLTELVLKYCTEDLECSAPH
LVEAVKGYRGGYTKGDRREIEGKLFSGKLLGVTATSALELGIDLGDLDVT
IHLGYPGSVSSLWQQAGRAGRGGRNSLAILIMFDSPL
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mRNA from alignment at Contig_1:227518..229645+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_955 ID=mRNA_955|Name=jgi.p|Trimin1|142835|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2128bp|location=Sequence derived from alignment at Contig_1:227518..229645+ (Tribonema minus UTEX_B_3156 )
CGCCGGCGCAGCTCCATTGTGGAGACAGCGCGCGTGCTGAGCGCGCTGGT GAAGCAGCACGTGCGCACGCTGGCGTTCTGCCGCACGCGCAAGCTCACGG AGCTCGTGCTCAAGTACTGCACGGAGGACCTGGAGTGCAGCGCGCCGCAC CTGGTGGAGGCCGTCAAGGGGTACAGGGGGGGGTACACCAAGGTCGGTGA TGTTTTTCATGAGTTGTTGCAACTCGTTTGTTGAGAGGTGCATTGTGTAC GGAAAGCCTGCGTGCATCAGTTGAAGAACTAGATGCGTACGTCAAGGTCA GCGTCGGCGGTGTTGTTTATTGCTTTTTTATGAGTTGTTGAAGCGTGTCA GTTGAGAGGTGCCTGTACGCGGAAAGCCTGCGTGCATCAGTTGAAAAAGT AGCAGCATAGGTATCGTCACCCGACTGGGAGATGCTGTGCACCTGGACGA GAACCATCACGGCTGTCATGCCTCACCTTTGACACATCTGAGTTGGTGAA CTTCAAATTCACTGTGAACATCATACCATGAGTGCCTTGAAGCATTTTGA CCGGGCGCATCAGTTGCAGAAGCAGTGACATGCTGGACTCTACTAGTAGT AGCAGGACTTGCTTGGCACCTGGCCGAGAGCCGCCGGTGTGCAGGGAATA TAACGCCGTTCTCGCAACACTCCTGAATGAGAGCCCTTCAATGTCGCTGT GACTTCCACGCCATGATTGTGCCTCAAACACCACTGCATTCAAGGCGATG GGTGCGAGCAAGTCAGCCAAGCTTCAGGCGCCTGCATTGCAGCATTGCAC GTGACCCCACTTCTCTCAAGTAGTCCTTCTCCTCTCACCCCGCCCACTTT GGCAGGGGGATCGGCGAGAGATTGAGGGCAAGCTCTTCAGCGGCAAGCTG CTGGGCGTAACTGCCACCAGCGCACTTGAGCTTGGCATCGATCTCGGCGA TCTGGACGTCACAATCCATCTCGGTAAGTTGTGCGCGCCTGCGCGTGACG CAGAAGTGGTTGAGGCATGGTCATACTTGGAAGTATGACTTACATATCGT GCCCCACCATCACAACGCATGCGAATGCGCCTTTTCCTAGCGGTTCTTTC GTCAATGCGCCACCAACAGTCTGTAAGTTTCTACACAGACTATGAGTGTG TACCGTGCTTGGCCCTCATGGCTTTTCTAGAAAGTGAAACGCGCACGTTA CTTCAGCTCTTCACTGGCCATGAGCGTAATGCTATCTGACTGTGGCAGTG ACAGCCTCAGAACATGAGCACCCAAAGCGCCTTTGTGAAGTTTATTTTCA AGGCAGGTGTGTACGGCCCTCTGCACTGAACTGCAGGATTGCTCTGCAAT TAGTTACTGGTACGCTCCGTGTTTGCTTGCATGTCGCAGCGCATTGAGGT TGAATCATCTGTGACTTTGCATCATTCCTTGAAGTTCCAGGGTGCTTTTT TGATGAGCGGCTTGCGTATGCAACTGGACTGCGTTAGACATGACAGCCCC CTTTTTGTGCATTCACGACGATCTGCACTGACTTCGCGTGTGTGCTCTGG TCATGTGCGCCCCCTGTGCTGCTCACACGCAGCATCATTGTCAATATCAC TACGTACACTTCCTGAGGCAACATTGCAACATTGCGCCGGTCATCGGCTC TGTAAGCAAGCTGTGGCAGCAGCCGATTCGACTGCCGCTTATCATGTATC ATCTTCCCAGGCTGAGTCCACACATGCACTCTATGCCACCAATGTTCCCG CTTAGCATACATACCAGCCCTGAGTGAGGGTTAGGGTTAGGGTTAGGGTT AGGGTTAGGGTTAGGGTTAGAGTACACACGCTCTCGCTGCTGCCCGATGC TGTCCATGTACCGCAAAACATGTACCTGAAACACCCGAAAAGAATATGTA CCTGAAAAACATGTCAAGTACCTGAGAAACTTGTACCCGAAAACATGCAC CTGAAAAACATGTCAAGTACCTGAAAAACCTGTACTCGAAAACCATGTAT CTGAACAACATGTACCTCAAAAACCAGGCTATCCGGGATCGGTGAGCAGC CTGTGGCAGCAAGCGGGGCGCGCTGGCCGCGGCGGCCGCAACTCTCTGGC CATTCTCATCATGTTTGACTCGCCGCTC
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Coding sequence (CDS) from alignment at Contig_1:227518..229645+

>mRNA_955 ID=mRNA_955|Name=jgi.p|Trimin1|142835|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=411bp|location=Sequence derived from alignment at Contig_1:227518..229645+ (Tribonema minus UTEX_B_3156 )
CGCCGGCGCAGCTCCATTGTGGAGACAGCGCGCGTGCTGAGCGCGCTGGT
GAAGCAGCACGTGCGCACGCTGGCGTTCTGCCGCACGCGCAAGCTCACGG
AGCTCGTGCTCAAGTACTGCACGGAGGACCTGGAGTGCAGCGCGCCGCAC
CTGGTGGAGGCCGTCAAGGGGTACAGGGGGGGGTACACCAAGGGGGATCG
GCGAGAGATTGAGGGCAAGCTCTTCAGCGGCAAGCTGCTGGGCGTAACTG
CCACCAGCGCACTTGAGCTTGGCATCGATCTCGGCGATCTGGACGTCACA
ATCCATCTCGGCTATCCGGGATCGGTGAGCAGCCTGTGGCAGCAAGCGGG
GCGCGCTGGCCGCGGCGGCCGCAACTCTCTGGCCATTCTCATCATGTTTG
ACTCGCCGCTC
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