Trimin1|350228|estExt_Genemark1.C_Ctg_590043 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350228
Unique NameTrimin1|350228|estExt_Genemark1.C_Ctg_590043
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length493
Homology
BLAST of jgi.p|Trimin1|350228 vs. uniprot
Match: A0A836CAM8_9STRA (BRCT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAM8_9STRA)

HSP 1 Score: 991 bits (2563), Expect = 0.000e+0
Identity = 492/492 (100.00%), Postives = 492/492 (100.00%), Query Frame = 0
Query:    1 MSLQAVPKWGGAVTVWRKPTAGVSAASLLQHTLSPPHKKRRSATPGAASAATGAPSSGGNWTPPEGLTHVVAGDGTSTAEVKQELGVTKVPSKVKLVSKAWLTQCLQVGVESRAKVPEYPFLLLDPSEQKPPRTLASPFATDVSSGGSANNSDTDGGDSDRDVGVADLMGGTGGGGEAPLPYVPPFACQRRTPLRHHNEDIVALLHELIDYYDAERDSKRSLAFTQVAAVLKSLPRRVRSGAELKPIKFIGKSAIEAVDEIVKTGHLTRLEAMRANPRLTAIKELSEVWMVGPTIAERWYDAGLGITNIETAQKALESGQLAKEWEEVGWEVCRELDPKGTIKFMIGGGYRRGKELTSDLDIIATFERHGGSPHGCGDHVRWAHMLADKMEERGYIKVCNLPDGMNNKKSEDTGMYEGNTSLLGLYPWRGKMRRVDIFMSAPSQWAYGVLGWTGSRTFLRQMRRYASDGFTREEQVFEMLGLEFIPPEFRNT 492
            MSLQAVPKWGGAVTVWRKPTAGVSAASLLQHTLSPPHKKRRSATPGAASAATGAPSSGGNWTPPEGLTHVVAGDGTSTAEVKQELGVTKVPSKVKLVSKAWLTQCLQVGVESRAKVPEYPFLLLDPSEQKPPRTLASPFATDVSSGGSANNSDTDGGDSDRDVGVADLMGGTGGGGEAPLPYVPPFACQRRTPLRHHNEDIVALLHELIDYYDAERDSKRSLAFTQVAAVLKSLPRRVRSGAELKPIKFIGKSAIEAVDEIVKTGHLTRLEAMRANPRLTAIKELSEVWMVGPTIAERWYDAGLGITNIETAQKALESGQLAKEWEEVGWEVCRELDPKGTIKFMIGGGYRRGKELTSDLDIIATFERHGGSPHGCGDHVRWAHMLADKMEERGYIKVCNLPDGMNNKKSEDTGMYEGNTSLLGLYPWRGKMRRVDIFMSAPSQWAYGVLGWTGSRTFLRQMRRYASDGFTREEQVFEMLGLEFIPPEFRNT
Sbjct:    1 MSLQAVPKWGGAVTVWRKPTAGVSAASLLQHTLSPPHKKRRSATPGAASAATGAPSSGGNWTPPEGLTHVVAGDGTSTAEVKQELGVTKVPSKVKLVSKAWLTQCLQVGVESRAKVPEYPFLLLDPSEQKPPRTLASPFATDVSSGGSANNSDTDGGDSDRDVGVADLMGGTGGGGEAPLPYVPPFACQRRTPLRHHNEDIVALLHELIDYYDAERDSKRSLAFTQVAAVLKSLPRRVRSGAELKPIKFIGKSAIEAVDEIVKTGHLTRLEAMRANPRLTAIKELSEVWMVGPTIAERWYDAGLGITNIETAQKALESGQLAKEWEEVGWEVCRELDPKGTIKFMIGGGYRRGKELTSDLDIIATFERHGGSPHGCGDHVRWAHMLADKMEERGYIKVCNLPDGMNNKKSEDTGMYEGNTSLLGLYPWRGKMRRVDIFMSAPSQWAYGVLGWTGSRTFLRQMRRYASDGFTREEQVFEMLGLEFIPPEFRNT 492          
BLAST of jgi.p|Trimin1|350228 vs. uniprot
Match: A0A2U9BA38_SCOMX (DNA-directed DNA/RNA polymerase mu n=6 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A2U9BA38_SCOMX)

HSP 1 Score: 150 bits (380), Expect = 1.940e-36
Identity = 113/379 (29.82%), Postives = 166/379 (43.80%), Query Frame = 0
Query:  176 GEAPLPYVPPFACQRRTPLRHHNEDIVALLHELIDYYDAERDSKRSLAFTQVAAVLKSLPRRVRSGAELKPIKFIGKSAIEAVDEIVKTGHLTRLEAMRANPRLTAIKELSEVWMVGPTIAERWYDAGLGITNIETAQKALESGQLAKEWEEVGWE---------------VCRELDPKGTIKFMIG------GGYRRGKELTSDLDIIATFERHGGSPHGCGDHVRWAH----MLADKMEERGYIKVCNLP----DGMNN-----------KKSEDTGMYEG--NTSLLGLYPWRGKMRRVDIFMSAPSQWAYGVLGWTGSRTFLRQMRRYASDG--------------------FTREEQVFEMLGLEFIPPEFRNT 492
            GEA +  VP FACQRR  L +HN  I   L  L +  +   +  R +AF + AAVLK+LP  V    +L+ +  +G+ ++  + +I++ G    +E+M+ + R  A+K L+ V+ VG   A+RW   G     I T  +  +SG      ++ G E                  E+  K  +  + G      GG+RRGK    D+D + T    G         V W      +L  K     Y++  N P      M+            KK  + G   G   T   G  PWR    RVD+ +S  SQ+A+ +LGWTGS+ F R++RR+A                        T EE++F  LGLEFIPP  RN 
Sbjct:  129 GEAVVFSVPSFACQRRITLDNHNTIITGALSLLAENAELSEEDGRGVAFRRAAAVLKALPEPVTCMTQLRGLPCLGEHSLRVIKDILENGESNEVESMKQSERYKALKVLTGVFGVGAKTADRWIREG-----IHTLHQLRDSGHALNRAQQAGVEHYDDLNQPVSMAEADAVGEIVEKAVVSVLPGAQITLTGGFRRGKPSGHDVDFLITHPEEGREEGLMSKVVSWLESQGFLLYHKTSRNSYLESANGPARPASNMDRFERCFSIFKLAKKYHELGKDAGPEETKPAGHKPWRAV--RVDLVVSPISQFAFALLGWTGSKLFERELRRWAGQEKAMSLSSHALFDNKQKRYLTATSEEEIFGHLGLEFIPPSERNA 500          
BLAST of jgi.p|Trimin1|350228 vs. uniprot
Match: A0A5A9N5M5_9TELE (DNA-directed DNA/RNA polymerase mu n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9N5M5_9TELE)

HSP 1 Score: 147 bits (371), Expect = 1.770e-35
Identity = 113/363 (31.13%), Postives = 169/363 (46.56%), Query Frame = 0
Query:  186 FACQRRTPLRHHNEDIVALLHELIDYYDAERDSKRSLAFTQVAAVLKSLPRRVRSGAELKPIKFIGKSAIEAVDEIVKTGHLTRLEAMRANPRLTAIKELSEVWMVGPTIAERWYDAGLGITN--IETAQKALESGQLAK-EWEEVGWEVCR-ELDPKGTI------------KFMIGGGYRRGKELTSDLDIIATFERHGGSPHGCGDHVRWAH----MLADKMEERGYIKVCNLPDGMNNKKSEDTGMY-----EGN---TSLLGLYP--------WRGKMRRVDIFMSAPSQWAYGVLGWTGSRTFLRQMRRYAS-------------DGFTR-------EEQVFEMLGLEFIPPEFRNT 492
            +ACQRRTPL+HHN  +   L  L +      +  RS+AF + A+VLK+LP RV++  ELK +  +G  +   + EI++ G    +E+MR + +  A+K L+ ++ VG   A+RW+  GL   +  I T Q+     Q     ++E+   V + E D  G I            +  + GG+RRGKEL  D+D + T    G         + W      +L  K     Y++  + P    N        +     +G+   T   G+ P        WR    RVD+ +S  SQ+A+  LGWTGS+ F R +RR+A              D   R       EE++FE LGLEFIPP  RN 
Sbjct:   97 YACQRRTPLKHHNSHLTEALEVLSENAAYGENEGRSVAFRRAASVLKALPYRVQTMDELKCLPCLGDHSQRVIKEILEDGTSREVESMRQSEQFQAMKALTGIFGVGVRTADRWFREGLRSPSDLIRTGQQLNREQQAGVLYYDELNKPVTKHEADLIGDIVKEAVSAVLPGAEIQLMGGFRRGKELGHDVDFLITHPEEGKEEELMPKIISWLEERDLLLYQKTTRNSYLEKKDAPGRPPNNMDRFERCFSIFKLQGHAETTGSDGVRPSNQSEASYWRAV--RVDLVVSPYSQFAFATLGWTGSKLFERDLRRWAGQEKHMSLSSHALYDSVQRCYVRAQSEEEIFEYLGLEFIPPCERNA 457          
BLAST of jgi.p|Trimin1|350228 vs. uniprot
Match: UPI000E1E930D (DNA-directed DNA/RNA polymerase mu n=1 Tax=Dromaius novaehollandiae TaxID=8790 RepID=UPI000E1E930D)

HSP 1 Score: 144 bits (363), Expect = 6.500e-35
Identity = 103/355 (29.01%), Postives = 160/355 (45.07%), Query Frame = 0
Query:  177 EAPLPYVPPFACQRRTPLRHHNEDIVALLHELIDYYDAERDSKRSLAFTQVAAVLKSLPRRVRSGAELKPIKFIGKSAIEAVDEIVKTGHLTRLEAMRANPRLTAIKELSEVWMVGPTIAERWYDAGLG-ITNIETAQKALESGQLA--KEWEEVGWEV---------------CRELDPKGTIKFMIGGGYRRGKELTSDLDIIATFERHGGSPHGCGDHVRWAHMLADKMEERGYIKVCNL-PDGMNNKKSEDTGMYEGNTSLLGLYPWRGKMRRVDIFMSAPSQWAYGVLGWTGSRTFLRQMRRYASDG--------------------FTREEQVFEMLGLEFIPPEFRNT 492
            E P   VP + CQRRTPL HHN  +   L  L      + D +RSLAFT+ A+ LK+LPRR+    EL  +  +G+     + E+++ G     EA R + R   ++  + ++ VG   A RWY  GL  + ++  A   L   Q A  + WE++   V                R + P  T+  +  GG+RRGK    D+D++ +    G      G  V         + E+       L P G           +E   +++ L     +  RVD+ ++   Q+A+ +LGWTGSR F R++RR+AS                         EE++F++LGL++IPP  RN 
Sbjct:   42 EEPSTAVPAYGCQRRTPLAHHNTVLTEALETLARAAAFDGDQRRSLAFTRAASALKALPRRLGDVRELPALPGVGEHCRRVIQEVLEDGSSAEAEAARRSERYRTMELFTGIFGVGTQTAARWYRQGLRTLDDLRAAGPRLSRQQQAGLRHWEDLATPVTLAEAEAVAELVRAEARRVLPDATVTLV--GGFRRGKPTGHDVDLLLSHPEEGRERALLGPLVARLEQQGLLLYEQSQPNTFGLEPSG----GGSGLDRFERCFAIVRL----ARALRVDMVVAPRGQFAFALLGWTGSRHFERELRRFASHQRGLALSSHGLYDPXRELFLPAASEEEIFQLLGLDYIPPAERNA 386          
BLAST of jgi.p|Trimin1|350228 vs. uniprot
Match: W5UBD8_ICTPU (DNA-directed DNA/RNA polymerase mu n=3 Tax=Siluroidei TaxID=1489793 RepID=W5UBD8_ICTPU)

HSP 1 Score: 145 bits (367), Expect = 1.340e-34
Identity = 105/378 (27.78%), Postives = 166/378 (43.92%), Query Frame = 0
Query:  186 FACQRRTPLRHHNEDIVALLHELIDYYDAERDSKRSLAFTQVAAVLKSLPRRVRSGAELKPIKFIGKSAIEAVDEIVKTGHLTRLEAMRANPRLTAIKELSEVWMVGPTIAERWYDAGLGITNIETAQKALESGQLAKEWEEVGWEVCRELDPKGTIK---------------------FMIGGGYRRGKELTSDLDIIATFERHGGSPHGCGDHVRWAH----MLADKMEERGYIKVCNLP--------------------------DGMNNKKSEDTGMYEGNTSLLGLYPWRGKMRRVDIFMSAPSQWAYGVLGWTGSRTFLRQMRRYASD--GFT------------------REEQVFEMLGLEFIPPEFRNT 492
            +ACQRRTPL+HHN  +   L  L +  +   +  RS+AF + A+VLK+LP  VR+  ELK +  +G+ ++  + EI++ G  + +E+ R + +  A+K L+ V+ VG   A+RW+  GL      + +  + +GQ     ++ G +   +L+   T K                       + GG+RRGKE+  D+D + T    G         V W      +L  K     Y++  + P                          D      S ++G  +G         WR    RVD+ +S  SQ+A+  LGWTGS+ F R++RR+A    G +                   EE +F  LGLE+IPP  RN 
Sbjct:  138 YACQRRTPLKHHNSFLTEALETLAENAEFSENEGRSVAFRRSASVLKALPYVVRAMNELKDLPCLGEHSLRVIKEILEDGTSSEVESTRQSEQFQAMKALTGVFGVGARTADRWFREGL-----RSPEDLIHTGQKLNHAQQAGVQYYNDLNTPVTKKEAMVISDIVEKAVKAVLPGAIITLTGGFRRGKEVGHDVDFLITHPEEGAEEKLMPKIVNWLEDQGLLLYQKTTRNSYLESKDGPARPPSNMDRFERCFSIFKLEQSQVNSDTRLEASSYNSGTTDGMEERHSGSSWRAV--RVDLVVSPYSQFAFATLGWTGSKLFERELRRWAGQEKGMSLSSHALYDSKQQRYLRANSEEDIFAHLGLEYIPPSERNA 508          
BLAST of jgi.p|Trimin1|350228 vs. uniprot
Match: A0A8C4CLV6_9TELE (DNA-directed DNA/RNA polymerase mu n=1 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4CLV6_9TELE)

HSP 1 Score: 143 bits (360), Expect = 1.890e-34
Identity = 104/354 (29.38%), Postives = 170/354 (48.02%), Query Frame = 0
Query:  186 FACQRRTPLRHHNEDIVALLHELIDYYDAERDSKRSLAFTQVAAVLKSLPRRVRSGAELKPIKFIGKSAIEAVDEIVKTGHLTRLEAMRANPRLTAIKELSEVWMVGPTIAERWYDAGLGI-TNIETAQKALESGQLA--KEWEEVGWEVCR-ELDPKGTI------------KFMIGGGYRRGKELTSDLDIIATFERHGGSPHGCGDHVRWAHMLADKMEERGYIKVCNLPDGMNNKKSEDTGMYEGNTSLLGLY------PWRGKMR-----RVDIFMSAPSQWAYGVLGWTGSRTFLRQMRRYASD--------------------GFTREEQVFEMLGLEFIPPEFRNT 492
            +ACQRRTPL+H+N  +   L  L +      +  RS+AFT+ A+VLK+LPR V+   EL+ +  +G+ ++  + EI++ G    +E+ R + +  A+K L+ ++ VG   A+RWY  G+   +++  +++ L   Q A  + ++++   V + E D  G I            +  + GG+RRGKE   D+D + T    G         V W      +  +  Y++  + P     +   +   +E   S+  L       P R K       RVD+ +S  SQ+A+ VLGWTGS+ F R +RRYA                        T EE++F +LGLE+IP   RN 
Sbjct:   42 YACQRRTPLKHNNTHLTHALELLAESAAFGENEGRSVAFTRAASVLKTLPRSVQRIEELRGLPCLGEHSLRVIKEILEYGASQEVESTRQSEQYQAMKALTGIFGVGVKTADRWYREGVRRPSDLMDSEQKLNQAQQAGLQHYKDLNTCVSKAEADAIGVIVDQAVQAVLPGAQITLTGGFRRGKESGHDVDFLITHPEEGKEEGLMPKVVNWLDTQVGQKGQNSYLESKDGPA----RPPSNMDRFERCFSIFKLESQSCSPPEREKSHQWKAVRVDLVVSPFSQFAFAVLGWTGSKLFERDLRRYAGQVKNMSLNSHSLFDSHQRCFLRATSEEEIFSLLGLEYIPACDRNA 391          
BLAST of jgi.p|Trimin1|350228 vs. uniprot
Match: UPI0019C493EA (DNA-directed DNA/RNA polymerase mu n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI0019C493EA)

HSP 1 Score: 145 bits (365), Expect = 2.060e-34
Identity = 106/362 (29.28%), Postives = 169/362 (46.69%), Query Frame = 0
Query:  186 FACQRRTPLRHHNEDIVALLHELIDYYDAERDSKRSLAFTQVAAVLKSLPRRVRSGAELKPIKFIGKSAIEAVDEIVKTGHLTRLEAMRANPRLTAIKELSEVWMVGPTIAERWYDAGLG--ITNIETAQKALESGQLAKEW-EEVGWEVCRE---------------LDPKGTIKFMIGGGYRRGKELTSDLDIIATFERHGGSPHGCGDHVRWAH----MLADKMEERGYIKVCNLPDGMNNKKSEDTGMYEGNTSLLGLYP-------------WRGKMRRVDIFMSAPSQWAYGVLGWTGSRTFLRQMRRYASDG--------------------FTREEQVFEMLGLEFIPPEFRNT 492
            +ACQRRTPL+HHN  +   L  L +  +   +  RS+AF + A+VLK+LP  VR+  ELK +  +G+ ++  + EI++ G    +E+ R + +  A+K L+ V+ VG   A+RW   GL   +  ++T QK   + Q   ++ +++   V R+               L P+  I   + GG+RRGKE+  D+D + T    G         V W      +L  K     Y++  + P     +   +   +E   S+  L               WR    RVD+ +S  SQ+A+  LGWTGS+ F R++RR+A                        + EE++F  LGLE+IPP  RN 
Sbjct:  140 YACQRRTPLKHHNSFLTEALEILAENAEFSENEGRSVAFRRSASVLKALPHAVRTIDELKDLPCLGEHSLSVIKEILEDGTSREVESTRQSEQFQAMKALTGVFGVGVKTADRWVREGLRSPLDLVDTGQKLNHAQQAGVQYYKDLNTPVTRKEAMVISVIVEKAVKALLPEAIIT--LTGGFRRGKEVGHDVDFLITHPEEGAEEKLMPKIVNWLEDQGLLLYQKTTRNSYLESKDGPA----RPPSNMDRFERCFSIFKLEQSKIDSNAHAEASSWRAI--RVDLVVSPYSQFAFATLGWTGSKLFERELRRWAGQEKGMSLSSHALYDSKKKCYLQASSEEEIFTHLGLEYIPPSERNA 493          
BLAST of jgi.p|Trimin1|350228 vs. uniprot
Match: A0A556U392_BAGYA (DNA-directed DNA/RNA polymerase mu n=1 Tax=Bagarius yarrelli TaxID=175774 RepID=A0A556U392_BAGYA)

HSP 1 Score: 145 bits (365), Expect = 2.500e-34
Identity = 108/378 (28.57%), Postives = 171/378 (45.24%), Query Frame = 0
Query:  186 FACQRRTPLRHHNEDIVALLHELIDYYDAERDSKRSLAFTQVAAVLKSLPRRVRSGAELKPIKFIGKSAIEAVDEIVKTGHLTRLEAMRANPRLTAIKELSEVWMVGPTIAERWYDAGLGITNIETAQKALESGQLAKEWEEVGWEVCRELDPKGTIK---------------------FMIGGGYRRGKELTSDLDIIATFERHGGSPHGCGDHVRWAH----MLADKMEERGYIK--------VCNLP------------------DGMNNKKSEDTGMYEGNTSLLGLYPWRGKMRRVDIFMSAPSQWAYGVLGWTGSRTFLRQMRRYASD--GFT------------------REEQVFEMLGLEFIPPEFRNT 492
            +ACQRRTPL+HHN  +   L  L    +  ++  RS+AF + A+VLK+LPR VR+  +LK +  +G+ ++  + EI+  G  + +E  R + +  A+K L+ V+ VG   A+RW+  GL   +++   K+    Q     +E G +   +L+   T K                       + GG+RRGKE+  D+D + T    G         V W      +L  K     Y++         CN+                   D      S ++G+ +G  +  G   WR    RVD+ +S  SQ+A+  LGWTGS+ F R++RR+A    G +                   EE++F +LGLE+IPP  RN 
Sbjct:  138 YACQRRTPLKHHNSVLTDALEILALNAEFTKNEGRSVAFRRAASVLKALPRGVRTMDDLKDLPCLGEHSLRVIKEILDAGTSSEVEWTRQSEQFQAMKALTGVFGVGVRTADRWFREGLR-NHLDLIHKS----QKLNRAQEAGVQYYNDLNTPVTKKEAMVITVIVEKAVNDVLPGAIITLTGGFRRGKEVGHDVDFLITHPDEGAEEKLMPKIVNWLEDQGLLLYQKTTRNSYLENKDGPARPACNMDRFERCFSIFKLERSKLDSDTRIEDSSYNSGVTDGTQTHSGS-TWRAV--RVDLVVSPYSQFAFATLGWTGSKLFERELRRWAGQEKGMSLSSHALYDSKQQRYLPANSEEEIFTLLGLEYIPPSERNA 507          
BLAST of jgi.p|Trimin1|350228 vs. uniprot
Match: A0A6J2UVU8_CHACN (DNA-directed DNA/RNA polymerase mu n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2UVU8_CHACN)

HSP 1 Score: 145 bits (365), Expect = 2.560e-34
Identity = 109/386 (28.24%), Postives = 176/386 (45.60%), Query Frame = 0
Query:  177 EAPLPYVPPFACQRRTPLRHHNEDIVALLHELIDYYDAERDSKRSLAFTQVAAVLKSLPRRVRSGAELKPIKFIGKSAIEAVDEIVKTGHLTRLEAMRANPRLTAIKELSEVWMVGPTIAERWYDAGL-GITNIETAQKALESGQLA--------------KEWEEVGW---EVCRELDPKGTIKFMIGGGYRRGKELTSDLDIIATFERHGGSPHGCGDHVRWAH----MLADKMEERGYI-----------------------KVCNLPD--GMNNKKSEDTGMYEGNT---SLLGLYPWRGKMRRVDIFMSAPSQWAYGVLGWTGSRTFLRQMRRYASDG--------------------FTREEQVFEMLGLEFIPPEFRNT 492
            ++P   +  +ACQRRTPL+HHN  +   L  L    +   +  RS+AF + AAVLK+LPR VR   +LK +  +G+ ++  + EI++ G  + +E+ R + +  A+K L+ ++ VG   AERW+  G+  + +++T    L   Q A               E   +G    E  R + P   I   + GG+RRGKE+  D+D + T    G         V W      +L  K     Y+                       K+   P+  G +N+ +    + EG+      +   P   +  RVD+ +S  SQ+A+ +LGWTGS+ F R++RR+A                        + EE++F +LGLE+IPP  RN 
Sbjct:  126 DSPTFAIESYACQRRTPLKHHNASLTEALELLAQNAEFTDNEGRSVAFRRAAAVLKTLPRAVRRLDDLKGLPCLGEHSLRVIKEILEDGVSSEVESTRQSEQYKAMKVLTGIFGVGTKTAERWFREGIRSLADLKTRGGRLNREQQAGLDYYDDLNRPVSKAEAHAIGQIVGEAVRAVLPGAEIT--LTGGFRRGKEVGHDVDFLITHPEEGKEEGLMPKIVSWLETKGLLLYQKTTRNSYLESKDGPVRPSHNMDRFERCFSIFKLKRTPEVCGTSNQSAGQNDVTEGSDVRQQEVQSEPSDWRAVRVDLVVSPYSQFAFALLGWTGSKLFERELRRWAGQEKSMSLSSHVLYDRAQNRYLRASSEEEIFALLGLEYIPPSQRNA 509          
BLAST of jgi.p|Trimin1|350228 vs. uniprot
Match: UPI001C8A97C3 (DNA-directed DNA/RNA polymerase mu n=1 Tax=Puntigrus tetrazona TaxID=1606681 RepID=UPI001C8A97C3)

HSP 1 Score: 143 bits (361), Expect = 7.620e-34
Identity = 106/371 (28.57%), Postives = 167/371 (45.01%), Query Frame = 0
Query:  186 FACQRRTPLRHHNEDIVALLHELIDYYDAERDSKRSLAFTQVAAVLKSLPRRVRSGAELKPIKFIGKSAIEAVDEIVKTGHLTRLEAMRANPRLTAIKELSEVWMVGPTIAERWYDAGLGITN--IETAQKALESGQLAKEW----------------EEVGWEVCRELDPKGTIKFMIGGGYRRGKELTSDLDIIATFERHGGSPHGCGDHVRWAH----MLADKMEERGYIKVCNLPDGMNNKKSEDTGMYEGNTSLLGLYP----------------------WRGKMRRVDIFMSAPSQWAYGVLGWTGSRTFLRQMRRYASDG-----------------FTR---EEQVFEMLGLEFIPPEFRNT 492
            +ACQRRTPL+HHN  +   L  L    +   +  RS+AF + A+VLK+LPRRVRS  +L+ +  +G  +   + EI++ G    +E+ R + +  A+K L+ ++ VG   A+RW+  GL   +  I T Q+   + Q   ++                 ++  +    + P   I+ M  GG+RRGKE+  D+D + T    G          +W      +L  K     Y++  + P     + S +   +E   S+  L                        WR    RVD+ +S  SQ+A+  LGWTGS+ F R++RR+A                    + R   EE++F  LGLEFIPP  RN 
Sbjct:  134 YACQRRTPLKHHNSFLTEALEILAQNAEYNDNEGRSVAFRRAASVLKALPRRVRSMEDLRCLPCLGDHSQRVIKEILEDGSSREVESTRQSEQYQAMKALTGIFGVGVRTADRWFREGLRSPDDLIRTGQQLNRAQQAGVQYYDDLQKPVTMAEADVISDIVEKAVHSVLPGAEIQLM--GGFRRGKEVGHDVDFLITHPEEGKEEGLMPKITKWLEEQGLLLYQKTTRNSYLEKTDGPA----RASSNMDRFERCFSIFKLQKPAVSRESNCTVSAEDAGSEASGWRAV--RVDLVVSPCSQFAFATLGWTGSKLFERELRRWAGQEKHMSLSSHALYDSTQNLYLRAKTEEEIFSYLGLEFIPPSERNA 496          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350228 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAM8_9STRA0.000e+0100.00BRCT domain-containing protein n=1 Tax=Tribonema m... [more]
A0A2U9BA38_SCOMX1.940e-3629.82DNA-directed DNA/RNA polymerase mu n=6 Tax=Scophth... [more]
A0A5A9N5M5_9TELE1.770e-3531.13DNA-directed DNA/RNA polymerase mu n=1 Tax=Triplop... [more]
UPI000E1E930D6.500e-3529.01DNA-directed DNA/RNA polymerase mu n=1 Tax=Dromaiu... [more]
W5UBD8_ICTPU1.340e-3427.78DNA-directed DNA/RNA polymerase mu n=3 Tax=Siluroi... [more]
A0A8C4CLV6_9TELE1.890e-3429.38DNA-directed DNA/RNA polymerase mu n=1 Tax=Dentice... [more]
UPI0019C493EA2.060e-3429.28DNA-directed DNA/RNA polymerase mu n=1 Tax=Silurus... [more]
A0A556U392_BAGYA2.500e-3428.57DNA-directed DNA/RNA polymerase mu n=1 Tax=Bagariu... [more]
A0A6J2UVU8_CHACN2.560e-3428.24DNA-directed DNA/RNA polymerase mu n=1 Tax=Chanos ... [more]
UPI001C8A97C37.620e-3428.57DNA-directed DNA/RNA polymerase mu n=1 Tax=Puntigr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002054DNA-directed DNA polymerase XSMARTSM00483polxneu3coord: 195..491
e-value: 8.1E-31
score: 118.4
IPR043519Nucleotidyltransferase superfamilyGENE3D3.30.460.10Beta Polymerase, domain 2coord: 320..446
e-value: 4.8E-10
score: 41.5
IPR043519Nucleotidyltransferase superfamilySUPERFAMILY81301Nucleotidyltransferasecoord: 327..491
IPR027421DNA polymerase lambda lyase domain superfamilyGENE3D1.10.150.110coord: 180..276
e-value: 5.2E-25
score: 89.6
IPR027421DNA polymerase lambda lyase domain superfamilySUPERFAMILY47802DNA polymerase beta, N-terminal domain-likecoord: 183..273
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 54..124
e-value: 8.0E-7
score: 30.8
IPR010996DNA polymerase beta-like, N-terminal domainPFAMPF14716HHH_8coord: 198..262
e-value: 4.0E-11
score: 43.1
IPR037160DNA polymerase, thumb domain superfamilyGENE3D3.30.210.10DNA polymerase, thumb domaincoord: 447..491
e-value: 3.0E-6
score: 28.9
NoneNo IPR availablePIRSRPIRSR000817-1PIRSR000817-1coord: 431..467
e-value: 3.3E-8
score: 30.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..171
IPR022312DNA polymerase family XPANTHERPTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERcoord: 57..491
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 58..107
score: 9.19442

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_59contigContig_59:484953..503837 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350228mRNA_11136Tribonema minus UTEX_B_3156 mRNAContig_59 484953..503837 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350228|estExt_Genemark1.C_Ctg_590043 ID=Trimin1|350228|estExt_Genemark1.C_Ctg_590043|Name=jgi.p|Trimin1|350228|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=493bp
MSLQAVPKWGGAVTVWRKPTAGVSAASLLQHTLSPPHKKRRSATPGAASA
ATGAPSSGGNWTPPEGLTHVVAGDGTSTAEVKQELGVTKVPSKVKLVSKA
WLTQCLQVGVESRAKVPEYPFLLLDPSEQKPPRTLASPFATDVSSGGSAN
NSDTDGGDSDRDVGVADLMGGTGGGGEAPLPYVPPFACQRRTPLRHHNED
IVALLHELIDYYDAERDSKRSLAFTQVAAVLKSLPRRVRSGAELKPIKFI
GKSAIEAVDEIVKTGHLTRLEAMRANPRLTAIKELSEVWMVGPTIAERWY
DAGLGITNIETAQKALESGQLAKEWEEVGWEVCRELDPKGTIKFMIGGGY
RRGKELTSDLDIIATFERHGGSPHGCGDHVRWAHMLADKMEERGYIKVCN
LPDGMNNKKSEDTGMYEGNTSLLGLYPWRGKMRRVDIFMSAPSQWAYGVL
GWTGSRTFLRQMRRYASDGFTREEQVFEMLGLEFIPPEFRNT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002054DNA-dir_DNA_pol_X
IPR043519NT_sf
IPR027421DNA_pol_lamdba_lyase_dom_sf
IPR036420BRCT_dom_sf
IPR010996DNA_pol_b-like_N
IPR037160DNA_Pol_thumb_sf
IPR022312DNA_pol_X
IPR001357BRCT_dom