Trimin1|168671|e_gw1.59.50.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|168671
Unique NameTrimin1|168671|e_gw1.59.50.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length263
Homology
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BLAST of jgi.p|Trimin1|168671 vs. uniprot
Match: A0A836CC32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC32_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 3.040e-10
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0 
Query:  234 PRLKRVTTLGCLGQYGKCGPHMQQRKTCL 262
            PRLKRVTTLGCLGQYGKCGPHMQQRKTCL
Sbjct:  234 PRLKRVTTLGCLGQYGKCGPHMQQRKTCL 262
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168671 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CC32_9STRA3.040e-10100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 140..160
e-value: 1.8
score: 9.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 100..245
e-value: 3.8E-31
score: 109.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..96
e-value: 1.3E-20
score: 75.2
NoneNo IPR availablePANTHERPTHR16083LEUCINE RICH REPEAT CONTAINING PROTEINcoord: 8..151
coord: 129..239
NoneNo IPR availablePANTHERPTHR16083:SF25SUBFAMILY NOT NAMEDcoord: 8..151
coord: 129..239
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 4..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_59contigContig_59:179562..180350 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168671mRNA_11105Tribonema minus UTEX_B_3156 mRNAContig_59 179562..180350 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|168671|e_gw1.59.50.1 ID=Trimin1|168671|e_gw1.59.50.1|Name=jgi.p|Trimin1|168671|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=263bp
MRHCVSLTSLPESLNDLPALTTLNLESCTRLTCLPNHNGNLRALTNLNLR
HCAALTRLPDSIGSLTALPTLQLSFCKALEALPDRIADMRAVTNIKLRAC
TALTAVPEAIGALTALTALNLQTCMLLTRLPDAIGQLAALRTLDVSNCRR
LACLPDSIGGLVSLTMLNLDFCRALTCLPDAIGSLAALTTLNLGNCSQLR
SLPSTVDGLTALTALNLHNCKALSGLPRALGELPRLKRVTTLGCLGQYGK
CGPHMQQRKTCL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf