Trimin1|350200|estExt_Genemark1.C_Ctg_580063 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350200
Unique NameTrimin1|350200|estExt_Genemark1.C_Ctg_580063
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1679
Homology
BLAST of jgi.p|Trimin1|350200 vs. uniprot
Match: A0A836CAR2_9STRA (RanBP2-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAR2_9STRA)

HSP 1 Score: 2551 bits (6611), Expect = 0.000e+0
Identity = 1678/1678 (100.00%), Postives = 1678/1678 (100.00%), Query Frame = 0
Query:    1 MSKDDSTXXXXXXXXXXXXXXXXXXXXXXXGGTLDAFLTIGAAAQRSKQAPERAAPAXXXXXXXXXXXXXXXXXXXXXXTSIFDGESGSDVDDPDPADDEGRLADPCATAAAPPCSRASAAQLGSTALLLCELGHARLPLPRPLSNATAXXXXXXXXXXXXXAQATTPCAHPNVSKDSTDAQHSDPVPARAAGSSGSSAAAPTSAAPATQPPSVGSADNGAPRVAPRKRKLSLSRKKNEQQRSVPRAVAPTAADIGQESGAGACSAGVEAGVRSSDQQTLTRALFPEGGQSHAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPFLPAAGSESGLRSMAPGTAAAGEHSSSDQSGGYKQQRKPLEMDLGSDSEEYASAQDGEGGAEAAEYRGGLGAVERGMLGTAAAQDQTDAANATAQQTPSPPAALSLLSYSADPSGREWACPRCTFANRLRSRACEACEAPKPAAAALLELPLQGHRGXXXXXXXXXXXXXXXAALLMDLGSDEEDTATAAAPAARGPPASPTRMPAIAAALLPAHRPLSLXXXXXXXXXXXXXXXXXXXXPQPRLRYGAADASAXXXXXXXXXXXXTPDXXXXXXXXXXXXXXTDIALPWAVVSPPKVPAAVPPHLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWWTCVHCDGSANAPRLWACGACGADRIPDCTQDAYGGDAYGGXXXXXAFTTQAEFRLSQGPSQADSAGDNSALRNVASGHEPVLDSASKPHARGQHAAAYGSGGAAAMHGNGDDGYSGASVPWERASGFGGSAPRNGSXXXXXXXXXXXXXXXXXSGRRSLDGVQPPELKRARLRLHGRAPLSAPPADACGSGEEHGAGDFGGSGGASDGRVGRHEEVLRQANGAHARSHARARAPSPLPPDDDMVRDAEEEAEWDDEHSLAQEQHQGRYYGAEPPEDELSDAPQXXXXXXXXXXXXXXXXXXXXXXXXXXVIRTAQQRYHTSDNDEFEDSDGCDENAEVNEDVDGGDDSDEVVDLTATQAPLSAAXXXXXXXXXXXXHADVEELSDDSDGDVAVMAAPKRPRMEAVTAPXXXXXXXXXXXXXXXXXXXRDARFPHFESVVDSTRRLALEGLPHIDFTKLRQEPAGNYQKSYAKRKAARAAKREAGKTVRKGSKKRKGKAAAARPYSSKGAHAAAVSDEGEADGISGGXXXXXXXXXXXSMTRAGHGRALSCCISEIQTKGDFCYNAGPAFAVNPAAAYEVKAWAGKFMQQMHSNYTSAALFQNSLKTQGANTDKQLENFYRRCVTSGATIHIGILGGSISVDKEGYVGMFANRVREMCPSAYVAVHSGARNAAGSLTLGMCASTAMLTTKLDLFVADFTLNDSYKYKHTIKGIFTSTPYEIMLRNVLTQFEVPPAVFNLYFWGGAFTYDTQQDELDTLAKLYSTTGISLRDLVWPFYTSGTLPFSTKDHIVKDIHHPNRRVCQLTGDLLVLYMAERFVGWVDTALAGQASAVAGTFPVALPPPRNAQLADWNFTFKFDCALVADAYRANGRTPYMVASNEMAVVTSPEPCVTFGSANASAVVPVHSNQGRVFFSNCMLETILFPIIGGTAGAAMQVYNVDGGGRVPLALRPMLNGSIEMFTIDPPLTPGWHMLEEQLRRLPLLLLVLLLPQVLPQP 1678
            MSKDDSTXXXXXXXXXXXXXXXXXXXXXXXGGTLDAFLTIGAAAQRSKQAPERAAPAXXXXXXXXXXXXXXXXXXXXXXTSIFDGESGSDVDDPDPADDEGRLADPCATAAAPPCSRASAAQLGSTALLLCELGHARLPLPRPLSNATAXXXXXXXXXXXXXAQATTPCAHPNVSKDSTDAQHSDPVPARAAGSSGSSAAAPTSAAPATQPPSVGSADNGAPRVAPRKRKLSLSRKKNEQQRSVPRAVAPTAADIGQESGAGACSAGVEAGVRSSDQQTLTRALFPEGGQSHAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPFLPAAGSESGLRSMAPGTAAAGEHSSSDQSGGYKQQRKPLEMDLGSDSEEYASAQDGEGGAEAAEYRGGLGAVERGMLGTAAAQDQTDAANATAQQTPSPPAALSLLSYSADPSGREWACPRCTFANRLRSRACEACEAPKPAAAALLELPLQGHRGXXXXXXXXXXXXXXXAALLMDLGSDEEDTATAAAPAARGPPASPTRMPAIAAALLPAHRPLSLXXXXXXXXXXXXXXXXXXXXPQPRLRYGAADASAXXXXXXXXXXXXTPDXXXXXXXXXXXXXXTDIALPWAVVSPPKVPAAVPPHLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWWTCVHCDGSANAPRLWACGACGADRIPDCTQDAYGGDAYGGXXXXXAFTTQAEFRLSQGPSQADSAGDNSALRNVASGHEPVLDSASKPHARGQHAAAYGSGGAAAMHGNGDDGYSGASVPWERASGFGGSAPRNGSXXXXXXXXXXXXXXXXXSGRRSLDGVQPPELKRARLRLHGRAPLSAPPADACGSGEEHGAGDFGGSGGASDGRVGRHEEVLRQANGAHARSHARARAPSPLPPDDDMVRDAEEEAEWDDEHSLAQEQHQGRYYGAEPPEDELSDAPQXXXXXXXXXXXXXXXXXXXXXXXXXXVIRTAQQRYHTSDNDEFEDSDGCDENAEVNEDVDGGDDSDEVVDLTATQAPLSAAXXXXXXXXXXXXHADVEELSDDSDGDVAVMAAPKRPRMEAVTAPXXXXXXXXXXXXXXXXXXXRDARFPHFESVVDSTRRLALEGLPHIDFTKLRQEPAGNYQKSYAKRKAARAAKREAGKTVRKGSKKRKGKAAAARPYSSKGAHAAAVSDEGEADGISGGXXXXXXXXXXXSMTRAGHGRALSCCISEIQTKGDFCYNAGPAFAVNPAAAYEVKAWAGKFMQQMHSNYTSAALFQNSLKTQGANTDKQLENFYRRCVTSGATIHIGILGGSISVDKEGYVGMFANRVREMCPSAYVAVHSGARNAAGSLTLGMCASTAMLTTKLDLFVADFTLNDSYKYKHTIKGIFTSTPYEIMLRNVLTQFEVPPAVFNLYFWGGAFTYDTQQDELDTLAKLYSTTGISLRDLVWPFYTSGTLPFSTKDHIVKDIHHPNRRVCQLTGDLLVLYMAERFVGWVDTALAGQASAVAGTFPVALPPPRNAQLADWNFTFKFDCALVADAYRANGRTPYMVASNEMAVVTSPEPCVTFGSANASAVVPVHSNQGRVFFSNCMLETILFPIIGGTAGAAMQVYNVDGGGRVPLALRPMLNGSIEMFTIDPPLTPGWHMLEEQLRRLPLLLLVLLLPQVLPQP
Sbjct:    1 MSKDDSTXXXXXXXXXXXXXXXXXXXXXXXGGTLDAFLTIGAAAQRSKQAPERAAPAXXXXXXXXXXXXXXXXXXXXXXTSIFDGESGSDVDDPDPADDEGRLADPCATAAAPPCSRASAAQLGSTALLLCELGHARLPLPRPLSNATAXXXXXXXXXXXXXAQATTPCAHPNVSKDSTDAQHSDPVPARAAGSSGSSAAAPTSAAPATQPPSVGSADNGAPRVAPRKRKLSLSRKKNEQQRSVPRAVAPTAADIGQESGAGACSAGVEAGVRSSDQQTLTRALFPEGGQSHAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPFLPAAGSESGLRSMAPGTAAAGEHSSSDQSGGYKQQRKPLEMDLGSDSEEYASAQDGEGGAEAAEYRGGLGAVERGMLGTAAAQDQTDAANATAQQTPSPPAALSLLSYSADPSGREWACPRCTFANRLRSRACEACEAPKPAAAALLELPLQGHRGXXXXXXXXXXXXXXXAALLMDLGSDEEDTATAAAPAARGPPASPTRMPAIAAALLPAHRPLSLXXXXXXXXXXXXXXXXXXXXPQPRLRYGAADASAXXXXXXXXXXXXTPDXXXXXXXXXXXXXXTDIALPWAVVSPPKVPAAVPPHLPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWWTCVHCDGSANAPRLWACGACGADRIPDCTQDAYGGDAYGGXXXXXAFTTQAEFRLSQGPSQADSAGDNSALRNVASGHEPVLDSASKPHARGQHAAAYGSGGAAAMHGNGDDGYSGASVPWERASGFGGSAPRNGSXXXXXXXXXXXXXXXXXSGRRSLDGVQPPELKRARLRLHGRAPLSAPPADACGSGEEHGAGDFGGSGGASDGRVGRHEEVLRQANGAHARSHARARAPSPLPPDDDMVRDAEEEAEWDDEHSLAQEQHQGRYYGAEPPEDELSDAPQXXXXXXXXXXXXXXXXXXXXXXXXXXVIRTAQQRYHTSDNDEFEDSDGCDENAEVNEDVDGGDDSDEVVDLTATQAPLSAAXXXXXXXXXXXXHADVEELSDDSDGDVAVMAAPKRPRMEAVTAPXXXXXXXXXXXXXXXXXXXRDARFPHFESVVDSTRRLALEGLPHIDFTKLRQEPAGNYQKSYAKRKAARAAKREAGKTVRKGSKKRKGKAAAARPYSSKGAHAAAVSDEGEADGISGGXXXXXXXXXXXSMTRAGHGRALSCCISEIQTKGDFCYNAGPAFAVNPAAAYEVKAWAGKFMQQMHSNYTSAALFQNSLKTQGANTDKQLENFYRRCVTSGATIHIGILGGSISVDKEGYVGMFANRVREMCPSAYVAVHSGARNAAGSLTLGMCASTAMLTTKLDLFVADFTLNDSYKYKHTIKGIFTSTPYEIMLRNVLTQFEVPPAVFNLYFWGGAFTYDTQQDELDTLAKLYSTTGISLRDLVWPFYTSGTLPFSTKDHIVKDIHHPNRRVCQLTGDLLVLYMAERFVGWVDTALAGQASAVAGTFPVALPPPRNAQLADWNFTFKFDCALVADAYRANGRTPYMVASNEMAVVTSPEPCVTFGSANASAVVPVHSNQGRVFFSNCMLETILFPIIGGTAGAAMQVYNVDGGGRVPLALRPMLNGSIEMFTIDPPLTPGWHMLEEQLRRLPLLLLVLLLPQVLPQP 1678          
BLAST of jgi.p|Trimin1|350200 vs. uniprot
Match: A0A835YI83_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI83_9STRA)

HSP 1 Score: 319 bits (818), Expect = 2.250e-92
Identity = 176/397 (44.33%), Postives = 236/397 (59.45%), Query Frame = 0
Query: 1261 EVKAWAGKFMQQMHSNYTSAALFQNSLKTQGANTDKQLENFYRRCVTSGATIHIGILGGSISVDKEGYVGMFANRVREMCPSAYVAVHSGARNAAGSLTLGMCASTAMLTTKLDLFVADFTLNDSYKYKHTIKGIFTSTPYEIMLRNVLTQFEVPPAVFNLYFWGGAFTYDTQQDELDTLAKLYSTTGISLRDLVWPFYTSGTLPFSTKDHIVKDIHHPNRRVCQLTGDLLVLYMAERFVGWVDTALAGQASAVAGTFPVALPPPRNAQLADWNFT-FKFDCALVADAYRANGRTPYMVASNEMAVVTSPEPCVTFGSANASAVVPVHSNQGRVFFSNCMLETILFPIIGGTAGAAMQVYNVDGGGRVPLALRPMLNGSIEMFTIDPPLTPGWHMLE 1656
            E+  +A  F+  M +++    LF+NSLK  GA TD+QLEN +R+CV  G TI +G                      EMCP + V +H+G+R + GSLTLGMCA+TAM T  +D+F+A+F LND+ +Y  T+K  F+S PYE+MLR+ LT FEVPPA+FNLYFWG   TY T Q E   L K Y  TGIS+RDLVWPFY+    P++ +  +  DIHHP R++ Q T DLL LYM+  F  W   A+ G A+       + LPPP N  LA +N     F C LV +  R NG  P +  +  + V T   PC+   S +A A + V + +G VF SNC+L    + I    AG+A+++++V GG RV L L P+L GSIEMF + P LTPG H  E
Sbjct:   63 EIGIYASDFITMMQASFPPDLLFKNSLKDDGAVTDRQLENVFRKCV-KGDTIRLG----------------------EMCPLSEVILHNGSRGSTGSLTLGMCATTAMDTKAVDIFIAEFALNDTTQY--TLKTGFSSLPYELMLRDALTAFEVPPAIFNLYFWGPGLTYKTGQPEYVALEKKYQLTGISIRDLVWPFYSHHRAPYALRSDVAVDIHHPTRQIHQHTADLLTLYMSFHFNAWAGKAVTGAAALALDKSQLELPPPANPPLAKFNLADAHFQCGLVPNVDRVNGVVPVLAGATGVKVTTR-FPCINVVSPDARARLSVSTREGWVFLSNCVLNKSKYRIAPDAAGSAVRLFDVTGGQRVRLFLVPVLPGSIEMFVVQPKLTPGRHTFE 433          
BLAST of jgi.p|Trimin1|350200 vs. uniprot
Match: A0A836C984_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C984_9STRA)

HSP 1 Score: 281 bits (719), Expect = 2.960e-80
Identity = 155/374 (41.44%), Postives = 223/374 (59.63%), Query Frame = 0
Query: 1285 NSLKTQGANTDKQLENFYRRCVTSGATIHIGILGGSISVDKEGYVGMFANRVREMCPSAYVAVHSGARNAAGSLTLGMCASTAML-TTKLDLFVADFTLNDSYKYKHTIKGIFTSTPYEIMLRNVLTQFEVPPAVFNLYFWGGAFTYDTQQDELDTLAKLYSTTGISLRDLVWPFYTSGTLPFSTKDHIVKDIHHPNRRVCQLTGDLLVLYMAERFVGWVDTALAGQASAVAGTFPVALPPPRNAQLADWNFT-FKFDCALVADAYRANGRTPYMVASNEMAVVTSPE-PCVTFGSANASAVVPVHSNQGRVFFSNCMLETILFPIIGGTAGAAMQVYNVDGGGRVPLALRPMLNGSIEMFTIDPPLTPGWHML 1655
            N L   GA TD QL+NF+R+CVT G+TI++GILGGSIS    GY   +   +++MCP++ V +++GAR + GS+TLG CA T++    ++DLFV +FTLND  KY  T  G F+S  YE +LRN LT F+  PA+  L+ WG  F YD+ Q  L  LA+ Y+ + IS+RD VWP+YT+   P ++K  +  D  HP+  V +   DLL  Y+  +F+ WVD+A+ G AS  AGT PVALP   N+ L  +     K DCA+V    R +GR P ++  +  ++  + +  CV F S      V V +  GR+F SNC      F + G    +A+ V+NV  G  +PL L  +++G  E F ++PPL PG + L
Sbjct:   15 NCLNNTGATTDTQLQNFFRKCVTPGSTINLGILGGSISQMLAGYQVTWLAYLQQMCPTSTVKLYNGARPSTGSMTLGYCAKTSVGGPEQVDLFVTEFTLNDGSKY--TTDGQFSSQSYEFLLRNTLTAFQYAPAIITLHLWGFPFVYDSPQPALVALAQRYALSAISIRDAVWPYYTAQREPLASKSEVTVDGIHPSAYVHKFAADLLHTYVVGKFLEWVDSAIDGTASQTAGTEPVALPEASNSPLNKYKVEEAKIDCAIVPSKDREDGRAPVLIDPSGFSIDPADQLACVKFTSDAPRTKVQVTTQTGRIFISNCYFGDRTFRMYGAERASAISVHNVVAGEWLPLMLIQLVDGIAEGFEVEPPLAPGTYTL 386          
BLAST of jgi.p|Trimin1|350200 vs. uniprot
Match: A0A835ZKB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKB1_9STRA)

HSP 1 Score: 272 bits (695), Expect = 7.280e-71
Identity = 163/421 (38.72%), Postives = 236/421 (56.06%), Query Frame = 0
Query: 1256 PAAAYEVKAWAGKFMQQMHSNYTSAALFQNSLKTQGANTDKQLENFYRRCVTSGATIHIGILGGSISVDKEGYVGMFANRVREMCPSAYVAVHSGARNAAGSLTLGMCASTAMLTTKLDLFVADFTLNDSYKYKHTIKGIFTSTPYEIMLRNVLTQFEVPPAVFNLYFWGGAFTYDTQQDELDTLAKLYSTTGISLRDLVWPFYTSGTLPFSTKDHIVKDIHHPNRRVCQLTGDLLVLYMAERFVGWVDTALAGQASAVAGTFPVALPPPRNAQLADWNF-TFKFDCALV--------ADAYRAN---GRTPYMVASNEMAVVTSPEPCVTFGSAN-ASAVVPVHSNQGRVFFSNCMLETILFPIIGGTAGAAMQVYNVD---GGG----RVPLALRPMLNGSIEMFTIDPPLTPGWHMLE 1656
            P AA   + W  K ++ MH+ Y    LF+NSLK +GA TD+QL   + +C+T G+TI IG LGGSI+     Y+      + +MCP A V   +GAR++ G+LTLGMCA T +    LDL V++F+LND   Y     G F++ P+E++ R +L+ ++  PAVFNL+FWG +F++D+ Q   + + + Y  TGISLRDLVWP+Y +   P++ +  +  D HHPN R  + T +LL+LY+A+RF  W   A  G   A  G  P+ LPPP    L  ++  + KFDCA+V        A A +     GR P M       V++ P PC+       A A++P+H+ QG V  SNC       P+  G+ G     + V+   G G    RVP  L  M++G+ E F +DP L PG  +LE
Sbjct:   50 PDAATATQLWVAKHIRHMHTTYPPDRLFENSLKHRGAITDQQLHPLFLKCITPGSTIRIGALGGSITHLPSSYIWPVGRLIAQMCPEATVETFNGARSSHGALTLGMCART-VTAPALDLAVSEFSLNDRAHYTAD-DGTFSALPFELLTRTLLSAYDPAPAVFNLFFWGMSFSHDSAQPWHEAVGEHYDVTGISLRDLVWPYYETSKAPYARRQDVCVDGHHPNDRFQKFTAELLLLYVAQRFQEWAAGAAKGGVDASIGRTPLRLPPPLAPDLERFDLESAKFDCAIVGGSKDFGSAQAKQRGVLRGRLPEMSVMEGWQVLSDP-PCIQVTDMQGAQALLPLHTQQGHVIMSNCHR-----PVPWGSKGNQGPAFGVNLLRGDGEPYERVPQRLVSMVDGNFEAFRVDPLLPPGDVLLE 462          
BLAST of jgi.p|Trimin1|350200 vs. uniprot
Match: A0A835YLT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLT4_9STRA)

HSP 1 Score: 231 bits (590), Expect = 5.550e-61
Identity = 159/476 (33.40%), Postives = 238/476 (50.00%), Query Frame = 0
Query: 1252 FAVNPAAAYEVKAWAGKFMQQMHSNYTSAALFQNSLKTQGANTDKQLENFYRRCVTSGATIHIGILGGSISVDKEGYVGMFANRVREMCPSAYVAVHSGARNAAGSLTLGMCASTAMLTTKLDLFVADFTLNDSYKYKHT---IKGIFTSTPYEIMLRNVLTQFEVPPAVFNLYFWGGAFTYDTQQDELDTLAKLYSTTGISLRDLVWPFYTSGTLPFSTKDHIVKDIHHPNRRVCQLTGDLLVLYMAERFVGWVDTALAGQAS-AVAGTFPVALPPPRNAQLADWNFTFK-FDCALV-ADAYRANGRTPYMVASNEMAVVTSPEP-----------CVTF----------------------GSA--------------------------NASAVVPVHSNQGRVFFSNCMLETILFPIIGGTAGAAMQVYNVDGGG----RVPLALRPMLNGSIEMFTIDPPLTPGWHMLEEQ 1658
            FA+ P+A+   + WA   +++M ++Y    LF+NSLK +G  TD QLE F+R+CVT G+ + +G +GGSI+     YV      + EMCP A V   +GAR++ G+LTLG+CA  A+    LD+ VA+F LND  +Y       +G F++ PYE+M+RN                   AFT+++ Q+  + + + Y  TG+SLRDLVWP++T+   P++ +  +  D+HHPN +    T +L++LY+AERFV W     +G+AS A  G  P+ALPPP + +L  ++ T   F+CALV A + +  GR P M   +   V   P+            C  F                      G+A                           ASA +PVH+ QG V  SNC       P +    G A  +  + G      R+PL L  +L G+ E F ++PPL  G H LE++
Sbjct:   40 FALPPSAS-ATEQWANAHIERMRAHYPPDRLFENSLKLRGEVTDLQLEPFFRKCVTPGSAVRVGAIGGSITHAPTSYVWSLGALLGEMCPHANVTALNGARSSHGALTLGLCAR-AVTHAALDVAVAEFALNDLGQYTRAEGAFRGQFSALPYELMMRN-------------------AFTHESAQEAHEEVGRRYGVTGLSLRDLVWPYFTAKRAPYAARGDVCSDLHHPNAQFQHFTAELVLLYIAERFVEWATRVRSGEASNATRGLAPLALPPPLHPELERFDLTHGGFECALVGAPSIKMPGRLPEMPVMSGWRVTEFPQCIQRHLYAYLSFCELFCTLHIHRVFEPARGPERTLPPRGAAPAAHAVDTVASTRKTGETCAQITDLRKASAFLPVHTEQGVVMLSNCFRPGP--PAMPKDHGPAFNLNLLVGDAPPYRRLPLELVSVLAGNYETFQVEPPLPAGNHTLEQR 492          
BLAST of jgi.p|Trimin1|350200 vs. uniprot
Match: A0A835YK35_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK35_9STRA)

HSP 1 Score: 206 bits (524), Expect = 7.850e-57
Identity = 104/213 (48.83%), Postives = 144/213 (67.61%), Query Frame = 0
Query: 1291 GANTDKQLENFYRRCVTSGATIHIGILGGSISVDKEGYVGMFANRVREMCPSAYVAVHSGARNAAGSLTLGMCASTAML-TTKLDLFVADFTLNDSYKYKHTIKGIFTSTPYEIMLRNVLTQFEVPPAVFNLYFWGGAFTYDTQQDELDTLAKLYSTTGISLRDLVWPFYTSGTLPFSTKDHIVKDIHHPNRRVCQLTGDLLVLYMAERFVGW 1502
            G++ D Q++NF+R+CVT GA I++GILGGSIS    GY   F  ++ EMCPSA V +++GAR++  S+TLG CA TAM   ++LDLF+++FT ND  KY  T  G F+S PYE+MLR+VLT F   P+V  L+FWG  FT+ T Q  L  LA+ Y  + +S+RD++WP+YT+G  P+ +KD    D  HP+  V QLT DLL  +   RF+ W
Sbjct:    1 GSSADVQMQNFFRKCVTPGAVINVGILGGSISQFGYGYQVTFIKQLAEMCPSAEVKLYNGARSSTPSMTLGYCAVTAMGGPSELDLFISEFTYNDGVKY--TTDGAFSSLPYELMLRSVLTAFPYSPSVLTLHFWGLDFTHKTPQAALVKLARRYKVSALSIRDVIWPYYTAGRDPYGSKDKCTIDGRHPSLAVHQLTADLLQTHFVTRFLAW 211          
BLAST of jgi.p|Trimin1|350200 vs. uniprot
Match: A0A836CKC8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKC8_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.720e-56
Identity = 141/391 (36.06%), Postives = 211/391 (53.96%), Query Frame = 0
Query: 1282 LFQNSLKTQGANTDKQLENFYRRCVTSGATIHIGILGGSISVDKE-GYVGMFANRVREMCPSAYVAVHSGARNAAGSLTLGMCASTAMLTTKLDLFVADFTLND-SYKYKHTIKGIFTSTPYEIMLRNVLTQFEVPPAVFNLYFWGGAFTYDTQQDELDTLAKLYSTTGISLRDLVWPFYTSGTLPFSTKDHIVKDIHHPNRRVCQLTGDLLVLYMAERFVGWVD----TALAGQASAVAGTFPVALPPPRNAQLADWNFTF-KFDCALVADAYRANGRTPYMVASNEMAVVTSPEPCVTFGSANASAVVPVHSNQGRVFFSNCMLETILFPIIGGTAGAAMQVYNVDGG---------GRVPLALRPMLNGSIEMFTIDPPLTPGWHMLE 1656
            L  N+LK  GA+T++QL+  + +C+T GA I +G+LGGSIS  ++  Y       +R +CP A V VH+GAR A GSLT+GMCA    L   +D+ + +F+LND S+ ++H      +   YE+ LR  LT F+  PAV  L+FWG  FT  + QD  + L K Y  TGIS+RDLVWP+  +   P++ +  +  D HHP   V   T +L+ LY++  F+ W      TA   + S++    P+ALP P + +L   +    K  C    D+   +     +  +   +V T P PCV F SAN++ +VPV + QG +  SNC      +    G A   ++VY ++            R  + L P+++ S E F  DPPL+PG H+LE
Sbjct:   57 LLLNALKNHGASTERQLQVLFWKCITPGARIVLGVLGGSISAFEDVSYQYPLGKFLRGLCPFATVEVHNGARAAHGSLTVGMCARCG-LGQHVDMLILEFSLNDWSHYHRHNETACAS---YELALRTALTSFQHAPAVLGLFFWGPYFTKQSAQDYHEPLCKHYGVTGISMRDLVWPYIEAQKAPWTKRTDVCSDSHHPTPAVHLYTANLIALYVSGVFLDWSKNVTVTAPTRRLSSLLP--PLALPEPISPELGRLDLIRGKLKCKWSIDSVYGSESRLELYENEGWSVQTRP-PCVHFTSANSTVLVPVETQQGVLIMSNCFRVPGYWET--GPAFQVLEVYLLEQAVDDNDKPVVSRSRVNLEPLVHQSGESFIADPPLSPGRHVLE 438          
BLAST of jgi.p|Trimin1|350200 vs. uniprot
Match: A0A836C8S8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8S8_9STRA)

HSP 1 Score: 200 bits (509), Expect = 9.230e-55
Identity = 98/217 (45.16%), Postives = 144/217 (66.36%), Query Frame = 0
Query: 1287 LKTQGANTDKQLENFYRRCVTSGATIHIGILGGSISVDKEGYVGMFANRVREMCPSAYVAVHSGARNAAGSLTLGMCASTAMLTTK-LDLFVADFTLNDSYKYKHTIKGIFTSTPYEIMLRNVLTQFEVPPAVFNLYFWGGAFTYDTQQDELDTLAKLYSTTGISLRDLVWPFYTSGTLPFSTKDHIVKDIHHPNRRVCQLTGDLLVLYMAERFVGW 1502
            L   G  TD QL NF+R+CVT G+TI++GILGGSIS    GY   + +R+++MCP + + ++ GAR++ GS+TLG CA  ++ + + +DLFV++FTLND  +Y  TI G F S  YE +LRNV+T F+  PA+  L+FWG  F Y++ Q +L  LA+ Y  + IS+RD VWP+YT+   P +T +   KD  HP+  V +L  DLL  Y+ ++F+ W
Sbjct:    1 LANTGTTTDTQLNNFFRKCVTPGSTINLGILGGSISQFSTGYQVKWISRLKQMCPVSSINLYDGARSSTGSMTLGFCAKASIGSPEEVDLFVSEFTLNDGSRY--TIDGAFNSQSYEFLLRNVITTFKYAPAIITLHFWGSPFVYESAQPDLVALAQRYKLSAISMRDAVWPYYTAQREPLATVEECTKDGIHPSDYVQKLAADLLHKYIVDKFLAW 215          
BLAST of jgi.p|Trimin1|350200 vs. uniprot
Match: A0A836CAJ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAJ4_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.630e-50
Identity = 105/268 (39.18%), Postives = 147/268 (54.85%), Query Frame = 0
Query: 1391 TIKGIFTSTPYEIMLRNVLTQFEVPPAVFNLYFWGGAFTYDTQQDELDTLAKLYSTTGISLRDLVWPFYTSGTLPFSTKDHIVKDIHHPNRRVCQLTGDLLVLYMAERFVGWVDTALAGQASAVAGTFPVALPPPRNAQLADWNFT-FKFDCALVADAYRANGRTPYMVASNEMAVVTSPE-PCVTFGSANASAVVPVHSNQGRVFFSNCMLETILFPIIGGTAGAAMQVYNV-DGGGRVPLALRPMLNGSIEMFTIDPPLTPGWHML 1655
            T  G+F+S PYE +LRN L  F+  PA+  L+ WG  F YD+ Q  L  LAK Y+ + IS+RD VWP+YT+   P +TK  +  D  HP+  V +LT DLL  Y+  +F+ WVD+A+ G  S   GT PV+LP   N +L ++     K DCA+V    R NG  P ++  N  ++  +    CV F     +  V V +  GR+F SNC      F   G    +A+ VY V +G   VPL L  +++G  E F +DPPL PG + L
Sbjct:   10 TTDGVFSSQPYEFLLRNTLAAFKYAPAINTLHVWGFPFVYDSPQPALVALAKRYALSAISIRDAVWPYYTAQREPLATKSEVTMDGIHPSPYVQRLTADLLHTYVVGKFLEWVDSAIDGTVSTTTGTAPVSLPEASNNRLNEYKVEEAKIDCAIVPSMGRDNGHAPALIDPNGFSIDPADRLACVKFTCDATNTKVQVTTQTGRIFISNCYFADRTFRTYGAERASAISVYRVVEGDVWVPLMLSQLVDGIAEGFEVDPPLAPGTYTL 277          
BLAST of jgi.p|Trimin1|350200 vs. uniprot
Match: A0A835Z775_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z775_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.090e-48
Identity = 90/200 (45.00%), Postives = 132/200 (66.00%), Query Frame = 0
Query: 1291 GANTDKQLENFYRRCVTSGATIHIGILGGSISVDKEGYVGMFANRVREMCPSAYVAVHSGARNAAGSLTLGMCASTAMLTTKLDLFVADFTLNDSYKYKHTIKGIFTSTPYEIMLRNVLTQFEVPPAVFNLYFWGGAFTYDTQQDELDTLAKLYSTTGISLRDLVWPFYTSGTLPFSTKDHIVKDIHHPNRRVCQLTGDL 1490
            GA+T+ QL N + +CVT GA I++G +GGSI+   + + G F+  +  +CP A V +H+GAR + G+LTLG+CA  A++  +LD+ + +F+LND  +Y     G F+S PYE+  R VLT  +  PAVF + FWG +FTYD+ Q   + + KLY  TGISLRD+VWP+++ G  PF+TK  +  D+HHPN  V  LT  +
Sbjct:   11 GASTEAQLRNVFLKCVTPGADINVGAIGGSITEHDDSWAGNFSALLSHLCPRAQVRMHNGARASHGALTLGLCAR-AVMAPELDIAMLEFSLNDQGQYTLP-NGTFSSLPYELATRTVLTGTDPTPAVFGISFWGRSFTYDSAQPYHEEVHKLYGVTGISLRDMVWPYFSKGRAPFATKADVCSDVHHPNAFVHGLTAQV 208          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350200 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A836CAR2_9STRA0.000e+0100.00RanBP2-type domain-containing protein n=1 Tax=Trib... [more]
A0A835YI83_9STRA2.250e-9244.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C984_9STRA2.960e-8041.44Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZKB1_9STRA7.280e-7138.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YLT4_9STRA5.550e-6133.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YK35_9STRA7.850e-5748.83Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CKC8_9STRA1.720e-5636.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C8S8_9STRA9.230e-5545.16Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CAJ4_9STRA1.630e-5039.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z775_9STRA1.090e-4845.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 681..706
e-value: 9.6
score: 4.1
coord: 445..469
e-value: 2.0E-5
score: 34.0
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 444..471
e-value: 7.2E-7
score: 28.4
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 447..466
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 442..472
score: 9.80014
NoneNo IPR availableGENE3D4.10.1060.10coord: 437..477
e-value: 4.5E-8
score: 34.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1009..1033
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 952..966
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 587..602
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1094..1110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 797..1128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1147..1222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 733..754
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..216
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 486..673
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..432
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1169..1183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 349..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 549..566
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 732..781
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 442..470

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_58contigContig_58:497599..515010 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350200mRNA_9415Tribonema minus UTEX_B_3156 mRNAContig_58 497599..515010 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350200|estExt_Genemark1.C_Ctg_580063 ID=Trimin1|350200|estExt_Genemark1.C_Ctg_580063|Name=jgi.p|Trimin1|350200|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1679bp
MSKDDSTGGGSSSGGGSGGGGGGASSAGGNGGTLDAFLTIGAAAQRSKQA
PERAAPAPRKRGSGGGGGSGSGGSGGGGGTSIFDGESGSDVDDPDPADDE
GRLADPCATAAAPPCSRASAAQLGSTALLLCELGHARLPLPRPLSNATAA
APTQQQQQQQRRAQATTPCAHPNVSKDSTDAQHSDPVPARAAGSSGSSAA
APTSAAPATQPPSVGSADNGAPRVAPRKRKLSLSRKKNEQQRSVPRAVAP
TAADIGQESGAGACSAGVEAGVRSSDQQTLTRALFPEGGQSHAGAAAAAS
AGAQRTDSDAASDRGGVAAAAAASAAAAPFLPAAGSESGLRSMAPGTAAA
GEHSSSDQSGGYKQQRKPLEMDLGSDSEEYASAQDGEGGAEAAEYRGGLG
AVERGMLGTAAAQDQTDAANATAQQTPSPPAALSLLSYSADPSGREWACP
RCTFANRLRSRACEACEAPKPAAAALLELPLQGHRGGGGGGGARSGARKR
GAALLMDLGSDEEDTATAAAPAARGPPASPTRMPAIAAALLPAHRPLSLQ
LPPRLPPRPPSPQQTQQQSPQPRLRYGAADASAAASAAASTVISQTPDGG
AGGSSSGGRGGGTDIALPWAVVSPPKVPAAVPPHLPSSESSAERAAAPSP
PRTSPPQEARMAASLFAQQAEGGGGEEGGALWWTCVHCDGSANAPRLWAC
GACGADRIPDCTQDAYGGDAYGGGGGGGAFTTQAEFRLSQGPSQADSAGD
NSALRNVASGHEPVLDSASKPHARGQHAAAYGSGGAAAMHGNGDDGYSGA
SVPWERASGFGGSAPRNGSSGGGSSSGGGGGGGGGGSGRRSLDGVQPPEL
KRARLRLHGRAPLSAPPADACGSGEEHGAGDFGGSGGASDGRVGRHEEVL
RQANGAHARSHARARAPSPLPPDDDMVRDAEEEAEWDDEHSLAQEQHQGR
YYGAEPPEDELSDAPQQRRRGGQQASGTRGGGGGGSSGGHGGVIRTAQQR
YHTSDNDEFEDSDGCDENAEVNEDVDGGDDSDEVVDLTATQAPLSAAARQ
QQRQRHPPPHADVEELSDDSDGDVAVMAAPKRPRMEAVTAPPLQQRQRHA
QQQQPPPQQQRDARFPHFESVVDSTRRLALEGLPHIDFTKLRQEPAGNYQ
KSYAKRKAARAAKREAGKTVRKGSKKRKGKAAAARPYSSKGAHAAAVSDE
GEADGISGGGGSSGGSSSGSSMTRAGHGRALSCCISEIQTKGDFCYNAGP
AFAVNPAAAYEVKAWAGKFMQQMHSNYTSAALFQNSLKTQGANTDKQLEN
FYRRCVTSGATIHIGILGGSISVDKEGYVGMFANRVREMCPSAYVAVHSG
ARNAAGSLTLGMCASTAMLTTKLDLFVADFTLNDSYKYKHTIKGIFTSTP
YEIMLRNVLTQFEVPPAVFNLYFWGGAFTYDTQQDELDTLAKLYSTTGIS
LRDLVWPFYTSGTLPFSTKDHIVKDIHHPNRRVCQLTGDLLVLYMAERFV
GWVDTALAGQASAVAGTFPVALPPPRNAQLADWNFTFKFDCALVADAYRA
NGRTPYMVASNEMAVVTSPEPCVTFGSANASAVVPVHSNQGRVFFSNCML
ETILFPIIGGTAGAAMQVYNVDGGGRVPLALRPMLNGSIEMFTIDPPLTP
GWHMLEEQLRRLPLLLLVLLLPQVLPQP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2
IPR036443Znf_RanBP2_sf