Trimin1|168561|e_gw1.58.33.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|168561
Unique NameTrimin1|168561|e_gw1.58.33.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length276
Homology
BLAST of jgi.p|Trimin1|168561 vs. uniprot
Match: A0A835YSK0_9STRA (Initiator tRNA phosphoribosyl transferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSK0_9STRA)

HSP 1 Score: 563 bits (1451), Expect = 4.610e-203
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
Query:    1 MADHVLWTEEECEPSVWTEADLAVLQDADFRADGKAPSVGKIARRLQQQSRHDLLNYLRSIQHDSHYITSALQAIRSRPGCTAFPAFANLRNGQWYGPPSAWEGTCYFKSADGHCGQWAFSYTRLNLHVACKAAMAGGCVVVDSTRRGKRFPDALTATVPLWCAVINSTLASIRGPDWDCSLHTPPWLSPSEASQIADRIAPSVAGLGTAADALRAQLGQHLARPLRPLWQAPGVPLSTEEGDLGDMGGLPFVPVICISASEVSSVAFVEQLALL 275
            MADHVLWTEEECEPSVWTEADLAVLQDADFRADGKAPSVGKIARRLQQQSRHDLLNYLRSIQHDSHYITSALQAIRSRPGCTAFPAFANLRNGQWYGPPSAWEGTCYFKSADGHCGQWAFSYTRLNLHVACKAAMAGGCVVVDSTRRGKRFPDALTATVPLWCAVINSTLASIRGPDWDCSLHTPPWLSPSEASQIADRIAPSVAGLGTAADALRAQLGQHLARPLRPLWQAPGVPLSTEEGDLGDMGGLPFVPVICISASEVSSVAFVEQLALL
Sbjct:    1 MADHVLWTEEECEPSVWTEADLAVLQDADFRADGKAPSVGKIARRLQQQSRHDLLNYLRSIQHDSHYITSALQAIRSRPGCTAFPAFANLRNGQWYGPPSAWEGTCYFKSADGHCGQWAFSYTRLNLHVACKAAMAGGCVVVDSTRRGKRFPDALTATVPLWCAVINSTLASIRGPDWDCSLHTPPWLSPSEASQIADRIAPSVAGLGTAADALRAQLGQHLARPLRPLWQAPGVPLSTEEGDLGDMGGLPFVPVICISASEVSSVAFVEQLALL 275          
BLAST of jgi.p|Trimin1|168561 vs. uniprot
Match: R1FCU2_EMIHU (Rit1_C domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FCU2_EMIHU)

HSP 1 Score: 170 bits (431), Expect = 1.720e-48
Identity = 94/200 (47.00%), Postives = 121/200 (60.50%), Query Frame = 0
Query:   38 SVGKIARRLQQQSRHDLLNYLRSIQHDSHYITSALQAIRSRPGCTAFPAFANLRNGQWYGPPSAWEGTCYFKSADGHCGQWAFSYTRLNLHVACKAAMAGGCVVVDSTRRGKRFPDALTATVPLWCAVINSTLASI---RGPDWDCSLHTPPWLSPSEASQIADRIAPSVAGLGTAA-DALRAQLGQHLARPLRPLWQAP 233
            S+ ++ R L ++ R D + +LRSI HD++++  A  A+  +P        ANLR G WY   +   G CYFKS DGH G WAFS +R+N+ VA  A+  GG +VVDSTR GKRFPD+L+ TVP+WC V+N   A +   R  DWD  LH PPW+ PSEASQI  RI   VA L   A  A+ A   + L  PLRP W  P
Sbjct:    8 SISRVLRTLHKERRADRIAHLRSIDHDANFVAGAHAAL-GKPAL-----LANLRCGVWYVDQALSAGNCYFKSTDGHAGGWAFSLSRINMQVALAASAHGGAMVVDSTRSGKRFPDSLSKTVPIWCCVVNRACAELSADRRADWDTDLHLPPWVPPSEASQIEARIGGWVAALRRPAMAAVLAGFARALDAPLRPGWLCP 201          
BLAST of jgi.p|Trimin1|168561 vs. uniprot
Match: D8RSU0_SELML (Uncharacterized protein (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RSU0_SELML)

HSP 1 Score: 169 bits (427), Expect = 1.940e-45
Identity = 99/229 (43.23%), Postives = 140/229 (61.14%), Query Frame = 0
Query:   38 SVGKIARRLQQQSRHDLLNYLRSIQHDSHYITSALQAIRSRPGCTAFPAFANLRNGQWYGPPSAWEGTCYFKSADGHCGQWAFSYTRLNLHVACKAAMAGGCVVVDSTRRGKRFPDALTATVPLWCAVINSTLASIRGPD----WDCSLHTPPWLSPSEASQIADRIAPSVAGLGTAADALRAQLGQHLARPLRPLWQAPGVPLSTEEGDLGDMGGLPFVPVICISASE 262
            S+ KIAR ++++ +  L N LRSI  D+ ++   ++A+R      A P  ANLR G WY     ++ TCYFKS DGH G W F+  RLN+H+A  AA +GGC++VDSTR+GKRFPD+++ T+P+W  V+N  ++ +  PD    WDC LH P W+S +E S I  R+   V G+  A+ A  A L   L RPLRPLW +    +  +E  + + G L F PVI +SAS 
Sbjct:   15 SIYKIARSIKRKEQ-SLYNALRSIYDDAGFVAE-IRALRP-----ALPLVANLRCGLWYA--RKFDDTCYFKSTDGHTGNWGFNPARLNIHIAAIAARSGGCMIVDSTRKGKRFPDSMSKTIPIWTCVMNRGISMLLDPDKRKSWDCELHLPSWVSETEKSCIQARLDQWV-GVLLASGADLAGLAASLERPLRPLWISQRSLIWLDE--IPEPGSLDFTPVILVSASR 231          
BLAST of jgi.p|Trimin1|168561 vs. uniprot
Match: A0A7S2T9V9_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S2T9V9_9CHLO)

HSP 1 Score: 167 bits (422), Expect = 7.260e-45
Identity = 97/229 (42.36%), Postives = 129/229 (56.33%), Query Frame = 0
Query:   40 GKIARRLQQQSRHDLLNYLRSIQHDSHYITSALQAIRSRPGCTAFPAFANLRNGQWYGPPSAWEGTCYFKSADGHCGQWAFSYTRLNLHVACKAAMAGGCVVVDSTRRG-KRFPDALTATVPLWCAVINSTLASIRGP----DWDCSLHTPPWLSPSEASQIADRIAPSVAGLGTAADALRAQLGQHLARPLRPLWQAPGVPLSTEEGDLGDMGGLPFVPVICISASEV 263
            G + R+L+++ R  L N LRSI  DS ++    + I   PG    P  ANLR G WY P   ++G CYFKS DGHCG+W FS+TRLN HVA  AA AGG ++VDST+   KRFPD+   TVP+WC V+N  +A  RG     DWD  +H P W+  SE S +   +      L      L  +L + LA+PLRPLW +   P+  +     D  G  FVPV  +  S++
Sbjct:   10 GNLLRKLKRRERAGLYNVLRSIYEDSLFVRELREDIL--PG---IPVLANLRCGAWYSP--RFDGDCYFKSTDGHCGKWQFSFTRLNAHVARTAAGAGGALLVDSTKSAVKRFPDSFARTVPIWCGVLNRAVAIARGEGDDRDWDREVHLPSWIPDSERSALEPLVEGWSQKLAKTQPGLLEELSEILAKPLRPLWVSDDSPM-WQHVTREDRDGFSFVPVYLLCCSKL 230          
BLAST of jgi.p|Trimin1|168561 vs. uniprot
Match: A0A7S1WBG7_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WBG7_ALECA)

HSP 1 Score: 160 bits (404), Expect = 8.720e-45
Identity = 95/190 (50.00%), Postives = 116/190 (61.05%), Query Frame = 0
Query:   85 PAFANLRNGQWYGPPSAWEGTCYFKSADGHCGQWAFSYTRLNLHVACKAAMAGGCVVVDSTRRGKRFPDALTATVPLWCAVINSTLAS----IRGPDWDCSLHTPPWLSPSEASQIADRI---APSVAGL--GTAADALRAQLGQHLARPLRPLWQAPGVPLST---EEGDLGDMGGLPFVPVICISASE 262
            P  ANLR G WY  P+A +G+CYFKS DGH G W FS TRLNLHVA  A+  GG ++VDSTRRGKRFPD+L  TVP+WCAV+N  LA      RG +  C LH PPW+  SE  QI  ++   A  +A L    A + L A LG  L RPLRPLW +P   L+    E   L +      +PV+CI+AS 
Sbjct:   15 PLLANLRAGAWYCQPTALDGSCYFKSTDGHTGHWDFSTTRLNLHVASLASSRGGVLLVDSTRRGKRFPDSLAKTVPIWCAVLNQVLADHSAGSRG-EVGCHLHLPPWVPASERDQIERKLPAWARRLASLVPAQALEELAAGLGTRL-RPLRPLWISPSDDLAACARESAALSET----CLPVVCITASR 198          
BLAST of jgi.p|Trimin1|168561 vs. uniprot
Match: I0YZL8_COCSC (Initiator tRNA phosphoribosyl transferase (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZL8_COCSC)

HSP 1 Score: 164 bits (416), Expect = 1.850e-44
Identity = 103/248 (41.53%), Postives = 133/248 (53.63%), Query Frame = 0
Query:   37 PSVGKIARRLQQQSRHDLLNYLRSIQHDSHYITSALQAIRSRPGCTAFPAFANLRNGQWYGPPSAWEGTCYFKSADGHCGQWAFSYTRLNLHVACKAAMAGGCVVVDSTRRGKRFPDALTATVPLWCAVINSTLASIR--------------------GPDWDCSLHTPPWLSPSEASQIADRI---APSVAGLGTAADALRAQLGQHLARPLRPLWQAPGVPLSTEEGDLGDMGGLPFVPVICISAS 261
            PSV K+ R L+++    L N + S+  D  ++        S          ANLR G WY P  A  GTCYFKS DGH G W FS TRLNLHVA  AA  GGC++VD+TRRGK FPDA T T+P+W AVIN  ++ +R                     P+WD  LH PPW+S +EA+QI+ R+   A  +  +G  AD   A L   L +PLRPLW +    +   E  +     LPF P+I +SAS
Sbjct:   16 PSVNKLLRHLKKEE-SGLYNCINSVIEDVIFVKEIASIYPS------LSLIANLRCGLWYAPDCA--GTCYFKSTDGHYGNWGFSITRLNLHVAHLAACEGGCLIVDATRRGKTFPDAFTKTIPIWAAVINHAVSLVRKQRTDTGAACATDDGRSSPEAPEWDTELHVPPWISANEANQISMRLDGWAQELLAVG--ADV--AGLALALTKPLRPLWVSQRSQIWLNE--VTQPADLPFTPLILVSAS 248          
BLAST of jgi.p|Trimin1|168561 vs. uniprot
Match: A0A0L0D870_THETB (Initiator tRNA phosphoribosyl transferase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D870_THETB)

HSP 1 Score: 162 bits (409), Expect = 5.640e-43
Identity = 107/237 (45.15%), Postives = 131/237 (55.27%), Query Frame = 0
Query:   32 ADGKAPSVGKIARRLQQQSRHDLLNYLRSIQHDSHYITSALQAIRSRPGCTAFPAFANLRNGQWYGPPSAWEGTCYFKSADGHCGQWAFSYTRLNLHVACKAAMAGGCVVVDSTRRGKRFPDALTATVPLWCAVINSTLASIRGPDWD------CSLHTPPWLSPSEASQIADRIAPSVAGLGTAADALRAQLGQHLA-RPLRPLWQAPGVPLSTEEGDLGDMGGLPFVPVICISAS 261
            A    PS+    RRL     H L   + SI  D+ ++ +  +     P  T  P FANLR G WY P  A   TCYFKS DGH GQWAFS  RLN HVA +AA AG  ++VD+TRRGK  PDAL+ TVPLW AV+N      R   WD       +LHTPP +  SEA  +A  +AP+   L  AAD   +QL   LA +PLR LW A      +E   L     LPF+P+IC+SAS
Sbjct:    8 ATAATPSLSTTLRRLHSAD-HSLAARILSIAADADWVAAVAELA---PHGT--PVFANLRCGAWYAPQGA--PTCYFKSTDGHTGQWAFSLRRLNAHVAIEAAAAGAALIVDATRRGKPLPDALSKTVPLWAAVLN------RAAGWDPAANSHAALHTPPAIPASEAHDMAACVAPAADALAAAADL--SQLTTALAHKPLRVLWVAQTHRNLSEWPALTHPATLPFIPIICVSAS 228          
BLAST of jgi.p|Trimin1|168561 vs. uniprot
Match: A0A0D9WR65_9ORYZ (Uncharacterized protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9WR65_9ORYZ)

HSP 1 Score: 162 bits (410), Expect = 1.150e-42
Identity = 99/265 (37.36%), Postives = 140/265 (52.83%), Query Frame = 0
Query:   23 AVLQDADFRADGKAP-SVGKIARRLQQQSRHDLLNYLRSIQHDSHYITSALQAIRSRPGCTAFPAFANLRNGQWYGPPSAWEGTCYFKSADGHCGQWAFSYTRLNLHVACKAAMAGGCVVVDSTRRGKRFPDALTATVPLWCAVINSTLASIR--------------------GPDWDCSLHTPPWLSPSEASQIADRIAPSVAGLGTAADALRAQLGQHLARPLRPLWQAPGVPLSTEEGDLGDMGGLPFVPVICISASEVSSV 266
            A  +  D+ A G +  S+ K ARR++++    L N LRS+  D+ ++   + A+       A P  ANLR G WY PP A   TCYFKS DGH G WAFS  RLNLH+A  A   GGC++VDSTRRGKRFPD+++ T+P+WC V+N  +   R                      +WD S+H P W+  +E + I  RI    A   +    +R+ L   L +PLRPLW +    +   E  + ++    F P+I +SAS   +V
Sbjct:    4 AAAESPDYAAGGPSTLSIYKAARRIKRRE-STLYNALRSVADDAAFVAE-IAAL-----WPALPLVANLRCGLWYAPPRALAATCYFKSTDGHAGNWAFSTARLNLHLALLAGERGGCIIVDSTRRGKRFPDSMSKTIPIWCCVLNRAIERYRLQTINRSAAVPNRDSERISCSSNWDNSVHLPVWVLDTERNAIEGRIEEWTAQFESCGADIRS-LSLSLQKPLRPLWISQRTRIWLNE--VPELESWDFTPIILVSASASGAV 258          
BLAST of jgi.p|Trimin1|168561 vs. uniprot
Match: A0A7S3UNI5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UNI5_HETAK)

HSP 1 Score: 152 bits (384), Expect = 1.590e-42
Identity = 74/123 (60.16%), Postives = 84/123 (68.29%), Query Frame = 0
Query:   48 QQSRHDLLNYLRSIQHDSHYITSALQAIRS---RPGCTAFPAFANLRNGQWYGPPSAWEGTCYFKSADGHCGQWAFSYTRLNLHVACKAAMAGGCVVVDSTRRGKRFPDALTATVPLWCAVIN 167
            QQ R  + N+ +SIQHDS ++   L   RS      C  F  FAN RNG WY P   W+G CYFKSADGH G+W FS  RLNLHVA  AA AGG VVVDSTRRGK  PD+LTATVP+WCAV+N
Sbjct:    2 QQERTSIYNHCKSIQHDSEFVVDVLGVYRSWAFEKKCLPFTCFANKRNGVWYAPEEEWDGLCYFKSADGHEGRWTFSQGRLNLHVARAAAEAGGVVVVDSTRRGKDCPDSLTATVPIWCAVLN 124          
BLAST of jgi.p|Trimin1|168561 vs. uniprot
Match: A0A2K1L8Q2_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L8Q2_PHYPA)

HSP 1 Score: 162 bits (411), Expect = 2.780e-42
Identity = 107/279 (38.35%), Postives = 144/279 (51.61%), Query Frame = 0
Query:   14 PSVWTEADLAVLQDAD---FRADGKAPSVGKIARRLQQQSRHDLLNYLRSIQHDSHYITSALQAIRSRPGCTAFPAFANLRNGQWYGPPSAWEGTCYFKSADGHCGQWAFSYTRLNLHVACKAAMAGGCVVVDSTRRGKRFPDALTATVPLWCAVINSTLASIRGP---------------------------DWDCSLHTPPWLSPSEASQIADRIAPSVAGLGTAADALRAQLGQHLARPLRPLWQAPGVPLSTEEGDLGDMGGLPFVPVICISASE 262
            PS   EA L+  Q  D    RA     S+ K++R+++Q+  H L N LRSI HDS ++   + A+  R      P  ANLR G WY     +   CYFKS DGH G W+F+ TRLNLHVA  AA  GGC++VD+TR+GKRFPD+++ T+P+W  VIN  LA +R                             DWDC LH P W+S +E + I +R+   V  L      L   L Q L +PLR LW +    +   E  + D   L F P+  +SAS+
Sbjct:   48 PSCGAEACLSKEQRRDCWGLRAGESMESIYKVSRQIKQKE-HSLYNALRSIYHDSLFVAE-IAALWPR-----LPLLANLRCGLWYS--QHFYDVCYFKSTDGHNGNWSFNVTRLNLHVAELAAQKGGCIIVDATRKGKRFPDSMSKTLPIWACVINRALADLRKSLDENPNHLKPEEDFLDSEENSLRRHSLDWDCQLHLPIWVSETEKNNIVNRLDTWVEDLKNCGANL-IPLAQMLRKPLRTLWVSQKTVIWLNE--IVDTETLDFTPIFLVSASQ 314          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168561 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YSK0_9STRA4.610e-203100.00Initiator tRNA phosphoribosyl transferase-domain-c... [more]
R1FCU2_EMIHU1.720e-4847.00Rit1_C domain-containing protein n=1 Tax=Emiliania... [more]
D8RSU0_SELML1.940e-4543.23Uncharacterized protein (Fragment) n=4 Tax=Selagin... [more]
A0A7S2T9V9_9CHLO7.260e-4542.36Hypothetical protein n=1 Tax=Chloropicon roscoffen... [more]
A0A7S1WBG7_ALECA8.720e-4550.00Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
I0YZL8_COCSC1.850e-4441.53Initiator tRNA phosphoribosyl transferase (Fragmen... [more]
A0A0L0D870_THETB5.640e-4345.15Initiator tRNA phosphoribosyl transferase n=1 Tax=... [more]
A0A0D9WR65_9ORYZ1.150e-4237.36Uncharacterized protein n=1 Tax=Leersia perrieri T... [more]
A0A7S3UNI5_HETAK1.590e-4260.16Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2K1L8Q2_PHYPA2.780e-4238.35Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033449Rit1, N-terminal domainPFAMPF17184Rit1_Ccoord: 49..265
e-value: 2.0E-59
score: 201.1
IPR007306tRNA A64-2'-O-ribosylphosphate transferasePANTHERPTHR31811TRNA A64-2'-O-RIBOSYLPHOSPHATE TRANSFERASEcoord: 35..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_58contigContig_58:657789..659558 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168561mRNA_9426Tribonema minus UTEX_B_3156 mRNAContig_58 657789..659558 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|168561|e_gw1.58.33.1 ID=Trimin1|168561|e_gw1.58.33.1|Name=jgi.p|Trimin1|168561|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=276bp
MADHVLWTEEECEPSVWTEADLAVLQDADFRADGKAPSVGKIARRLQQQS
RHDLLNYLRSIQHDSHYITSALQAIRSRPGCTAFPAFANLRNGQWYGPPS
AWEGTCYFKSADGHCGQWAFSYTRLNLHVACKAAMAGGCVVVDSTRRGKR
FPDALTATVPLWCAVINSTLASIRGPDWDCSLHTPPWLSPSEASQIADRI
APSVAGLGTAADALRAQLGQHLARPLRPLWQAPGVPLSTEEGDLGDMGGL
PFVPVICISASEVSSVAFVEQLALL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033449Rit1_N
IPR007306Rit1