Trimin1|168495|e_gw1.58.172.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|168495
Unique NameTrimin1|168495|e_gw1.58.172.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length76
Homology
BLAST of jgi.p|Trimin1|168495 vs. uniprot
Match: A0A835YNT2_9STRA (BRCT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNT2_9STRA)

HSP 1 Score: 160 bits (406), Expect = 3.000e-50
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0
Query:    1 PQLQIFRGIRLYFNGRTGERSAHYLAKLVQQHGGGAAPNYAVRKVTYVIAENLNGSKTHKVLHAHGKYLVVHPDW 75
            PQLQIFRGIRLYFNGRTGERSAHYLAKLVQQHGGGAAPNYAVRKVTYVIAENLNGSKTHKVLHAHGKYLVVHPDW
Sbjct:    1 PQLQIFRGIRLYFNGRTGERSAHYLAKLVQQHGGGAAPNYAVRKVTYVIAENLNGSKTHKVLHAHGKYLVVHPDW 75          
BLAST of jgi.p|Trimin1|168495 vs. uniprot
Match: A0A067BX51_SAPPC (BRCT domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BX51_SAPPC)

HSP 1 Score: 82.8 bits (203), Expect = 2.350e-18
Identity = 35/71 (49.30%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    5 IFRGIRLYFNGRTGERSAHYLAKLVQQHGGGAAPNYAVRKVTYVIAENLNGSKTHKVLHAHGKYLVVHPDW 75
            IF+G  LYF+GRTG  S++Y+ K+V++HG   +  +   +VT+++AENLNGSKT  +L + GK L VHP+W
Sbjct:   48 IFQGCNLYFDGRTGNVSSYYMTKMVKEHGASVSIMHRKTRVTHIVAENLNGSKTEALLKSRGKILCVHPNW 118          
BLAST of jgi.p|Trimin1|168495 vs. uniprot
Match: A0A484DRF5_BRELC (BRCT domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRF5_BRELC)

HSP 1 Score: 75.5 bits (184), Expect = 2.550e-15
Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = 0
Query:    2 QLQIFRGIRLYFNGRTGERSAHYLAKLVQQHGGGAAPNYAVRKVTYVIAENLNGSKTHKVLHAHGKYLVVHPDW 75
            Q  IF+G  + FNGRTG  S++YLAKLVQ+HGG  A      +VT+++  NLNGSK  K+L    K   V P+W
Sbjct:   63 QSDIFKGCHIVFNGRTGNVSSYYLAKLVQEHGGIVAAALTTTRVTHMVGLNLNGSKADKLLKNFSKVKFVSPEW 136          
BLAST of jgi.p|Trimin1|168495 vs. uniprot
Match: A0A0N7L3M4_PLAHL (BRCT domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L3M4_PLAHL)

HSP 1 Score: 72.8 bits (177), Expect = 3.710e-14
Identity = 34/69 (49.28%), Postives = 44/69 (63.77%), Query Frame = 0
Query:    5 IFRGIRLYFNGRTGERSAHYLAKLVQQHGGGAAPNYAVRKVTYVIAENLNGSKTHKVLHAHGKYLVVHP 73
            IF+G R+ FNGRTG  +++YLAKLVQ+HGG         +VT++I  NLNGSK  K L  + K   V P
Sbjct:   69 IFKGCRIVFNGRTGNVTSYYLAKLVQEHGGSVGSTLTTSRVTHMIGSNLNGSKADKALMGNAKVKFVRP 137          
BLAST of jgi.p|Trimin1|168495 vs. uniprot
Match: A0A0G4IYX9_PLABS (BRCT domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYX9_PLABS)

HSP 1 Score: 61.2 bits (147), Expect = 8.280e-10
Identity = 33/74 (44.59%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    4 QIFRGIRLYFNGRTGERSAHYLAKLVQQHGGGAAPNYAVRKVTYVIAENLNGSKTHKVLHAHGKYLV--VHPDW 75
            Q+F+G+ +YFNGR+GE SA  L   V+  GG  AP  +V+ VT+V+ ENL+  K+ KV+ +  K  V  V P+W
Sbjct:   61 QVFQGVCVYFNGRSGEFSALQLKSFVRLCGGRIAPMLSVKVVTHVVCENLSAIKSAKVVASGPKSRVHFVRPEW 134          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168495 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835YNT2_9STRA3.000e-50100.00BRCT domain-containing protein n=1 Tax=Tribonema m... [more]
A0A067BX51_SAPPC2.350e-1849.30BRCT domain-containing protein n=2 Tax=Saprolegnia... [more]
A0A484DRF5_BRELC2.550e-1548.65BRCT domain-containing protein n=1 Tax=Bremia lact... [more]
A0A0N7L3M4_PLAHL3.710e-1449.28BRCT domain n=1 Tax=Plasmopara halstedii TaxID=478... [more]
A0A0G4IYX9_PLABS8.280e-1044.59BRCT domain-containing protein n=1 Tax=Plasmodioph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001357BRCT domainPFAMPF12738PTCB-BRCTcoord: 10..60
e-value: 5.3E-6
score: 26.3
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 1..75
score: 16.483261
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190BRCT domaincoord: 1..75
e-value: 7.7E-13
score: 50.5
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 3..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_58contigContig_58:75415..75642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168495mRNA_9361Tribonema minus UTEX_B_3156 mRNAContig_58 75415..75642 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|168495|e_gw1.58.172.1 ID=Trimin1|168495|e_gw1.58.172.1|Name=jgi.p|Trimin1|168495|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=76bp
PQLQIFRGIRLYFNGRTGERSAHYLAKLVQQHGGGAAPNYAVRKVTYVIA
ENLNGSKTHKVLHAHGKYLVVHPDW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
IPR036420BRCT_dom_sf