Trimin1|168448|e_gw1.58.44.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|168448
Unique NameTrimin1|168448|e_gw1.58.44.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length67
Homology
BLAST of jgi.p|Trimin1|168448 vs. uniprot
Match: A0A835YNQ5_9STRA (WD repeat-containing protein 24 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNQ5_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.310e-49
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0
Query:    1 RCEKCAQALSRCALCEQPVRSLYVWCPGCGHGGHLHHMHEWFTQASACPTGCGHHCNLNLVLCEVP 66
            RCEKCAQALSRCALCEQPVRSLYVWCPGCGHGGHLHHMHEWFTQASACPTGCGHHCNLNLVLCEVP
Sbjct:    1 RCEKCAQALSRCALCEQPVRSLYVWCPGCGHGGHLHHMHEWFTQASACPTGCGHHCNLNLVLCEVP 66          
BLAST of jgi.p|Trimin1|168448 vs. uniprot
Match: I2CPR4_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPR4_NANGC)

HSP 1 Score: 98.6 bits (244), Expect = 5.790e-25
Identity = 37/56 (66.07%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    2 CEKCAQALSRCALCEQPVRSLYVWCPGCGHGGHLHHMHEWFTQASACPTGCGHHCN 57
            C KC   +S+CALC QPVR +YVWCPGCGHGGH+ H+ EWF   S CPTGCGH C+
Sbjct:   76 CGKCRALVSQCALCLQPVRGVYVWCPGCGHGGHIDHLQEWFAANSECPTGCGHRCH 131          
BLAST of jgi.p|Trimin1|168448 vs. uniprot
Match: A0A7S0K0D3_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K0D3_CAFRO)

HSP 1 Score: 92.8 bits (229), Expect = 8.580e-23
Identity = 36/64 (56.25%), Postives = 44/64 (68.75%), Query Frame = 0
Query:    2 CEKCAQALSRCALCEQPVRSLYVWCPGCGHGGHLHHMHEWFTQASA-CPTGCGHHCNLNLVLCE 64
            CE+C +    C+LC+ PV  L+VWC GCGHGGHL HM EWF  +S  CP GCGH CNL  ++ E
Sbjct:   27 CERCKRTAPICSLCQMPVSGLFVWCQGCGHGGHLEHMQEWFASSSTVCPAGCGHACNLRPLVAE 90          
BLAST of jgi.p|Trimin1|168448 vs. uniprot
Match: A0A4D9DDY3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDY3_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 1.770e-22
Identity = 37/56 (66.07%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    2 CEKCAQALSRCALCEQPVRSLYVWCPGCGHGGHLHHMHEWFTQASACPTGCGHHCN 57
            C KC   +S+CALC QPVR +YVWCPGCGHGGH+ H+ EWF   S CPTGCGH C+
Sbjct:  957 CGKCRALVSQCALCLQPVRGVYVWCPGCGHGGHIDHLQEWFAANSECPTGCGHRCH 1012          
BLAST of jgi.p|Trimin1|168448 vs. uniprot
Match: A0A2R5GG06_9STRA (GATOR complex protein WDR24 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GG06_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.570e-21
Identity = 36/60 (60.00%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    2 CEKCAQALSRCALCEQPVRSLYVWCPGCGHGGHLHHMHEWFTQASACPTGCGHHCNLNLV 61
            CE C   +SRCA+CEQ V+ +YVWC GCGH GHL HM EWF     CPTGCGH+C L+ +
Sbjct: 1404 CETCKHTVSRCAICEQVVKGVYVWCQGCGHAGHLDHMTEWFRTEKTCPTGCGHNCTLSDI 1463          
BLAST of jgi.p|Trimin1|168448 vs. uniprot
Match: A0A1X2GBD5_9FUNG (WD40 repeat-like protein n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GBD5_9FUNG)

HSP 1 Score: 94.7 bits (234), Expect = 3.960e-21
Identity = 35/57 (61.40%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    2 CEKCAQALSRCALCEQPVRSLYVWCPGCGHGGHLHHMHEWFTQASACPTGCGHHCNL 58
            C+KC + L+ C++C Q V+SLYVWC GC HGGHL HMH+WF     CPTGCGH C L
Sbjct:  683 CDKCHRLLNPCSICHQTVKSLYVWCQGCNHGGHLDHMHDWFADEKECPTGCGHQCVL 739          
BLAST of jgi.p|Trimin1|168448 vs. uniprot
Match: A0A7S2R7E5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2R7E5_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 6.580e-20
Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    2 CEKCAQALSRCALCEQPVRSLYVWCPGCGHGGHLHHMHEWFTQASACPTGCGHHCNL 58
            C  C   +SRC++C+Q VR +YVWC GCGHGGHL H+ +WF   + CPTGCGH C+L
Sbjct: 1087 CGTCKNTISRCSICQQAVRGVYVWCQGCGHGGHLDHLTQWFKTETECPTGCGHTCSL 1143          
BLAST of jgi.p|Trimin1|168448 vs. uniprot
Match: K3X200_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X200_GLOUD)

HSP 1 Score: 90.9 bits (224), Expect = 8.970e-20
Identity = 34/54 (62.96%), Postives = 40/54 (74.07%), Query Frame = 0
Query:   13 ALCEQPVRSLYVWCPGCGHGGHLHHMHEWFTQASACPTGCGHHCNLNLVLCEVP 66
            ++C+ PVR LYVWCP C HGGHL H+ EWF Q   CPTGC HHC+LNLV+   P
Sbjct:  954 SICQLPVRGLYVWCPVCSHGGHLEHLAEWFAQEHVCPTGCSHHCSLNLVMSMNP 1007          
BLAST of jgi.p|Trimin1|168448 vs. uniprot
Match: UPI0001EFC84D (WD repeat-containing protein 24 n=1 Tax=Trichinella spiralis TaxID=6334 RepID=UPI0001EFC84D)

HSP 1 Score: 87.4 bits (215), Expect = 2.780e-19
Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    2 CEKCAQALSRCALCEQPVRSLYVWCPGCGHGGHLHHMHEWFTQASACPTGCGHHC 56
            C  C + L  C++CE+ +R L++WCPGC HGGHL+H+  WF   S+CPTGCGH C
Sbjct:  220 CNTCQRPLQNCSVCEETIRGLFLWCPGCMHGGHLNHIESWFRSHSSCPTGCGHKC 274          
BLAST of jgi.p|Trimin1|168448 vs. uniprot
Match: A0A2R5L573_9ACAR (GATOR complex protein WDR24 (Fragment) n=2 Tax=Ornithodoros TaxID=6937 RepID=A0A2R5L573_9ACAR)

HSP 1 Score: 89.0 bits (219), Expect = 4.240e-19
Identity = 31/55 (56.36%), Postives = 39/55 (70.91%), Query Frame = 0
Query:    2 CEKCAQALSRCALCEQPVRSLYVWCPGCGHGGHLHHMHEWFTQASACPTGCGHHC 56
            C++C      CA+C +PVR LY+WC GC HGGH+HHM EWF +   CP+GCGH C
Sbjct:  749 CDRCKALAGACAVCHEPVRGLYIWCQGCCHGGHIHHMREWFQKWKMCPSGCGHLC 803          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168448 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YNQ5_9STRA1.310e-49100.00WD repeat-containing protein 24 n=1 Tax=Tribonema ... [more]
I2CPR4_NANGC5.790e-2566.07Uncharacterized protein (Fragment) n=1 Tax=Nannoch... [more]
A0A7S0K0D3_CAFRO8.580e-2356.25Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A4D9DDY3_9STRA1.770e-2266.07Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A2R5GG06_9STRA1.570e-2160.00GATOR complex protein WDR24 n=1 Tax=Hondaea fermen... [more]
A0A1X2GBD5_9FUNG3.960e-2161.40WD40 repeat-like protein n=1 Tax=Hesseltinella ves... [more]
A0A7S2R7E5_9STRA6.580e-2057.89Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
K3X200_GLOUD8.970e-2062.96Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
UPI0001EFC84D2.780e-1954.55WD repeat-containing protein 24 n=1 Tax=Trichinell... [more]
A0A2R5L573_9ACAR4.240e-1956.36GATOR complex protein WDR24 (Fragment) n=2 Tax=Orn... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF17120Zn_ribbon_17coord: 8..57
e-value: 1.2E-9
score: 37.6
IPR037590GATOR complex protein WDR24PANTHERPTHR46200GATOR COMPLEX PROTEIN WDR24coord: 2..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_58contigContig_58:285855..286055 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168448mRNA_9390Tribonema minus UTEX_B_3156 mRNAContig_58 285855..286055 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|168448|e_gw1.58.44.1 ID=Trimin1|168448|e_gw1.58.44.1|Name=jgi.p|Trimin1|168448|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=67bp
RCEKCAQALSRCALCEQPVRSLYVWCPGCGHGGHLHHMHEWFTQASACPT
GCGHHCNLNLVLCEVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037590WDR24