Trimin1|350160|estExt_Genemark1.C_Ctg_570088 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350160
Unique NameTrimin1|350160|estExt_Genemark1.C_Ctg_570088
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length261
Homology
BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A835YPP1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP1_9STRA)

HSP 1 Score: 456 bits (1172), Expect = 4.900e-161
Identity = 260/260 (100.00%), Postives = 260/260 (100.00%), Query Frame = 0
Query:    1 MAFMRCCAVLALAAGAAGFSLRGAEQQEQHGRKLAPKLCLKEWKACKADAICNNCLENGNVPEKPKIDNATCATVDKWWDQIAFKGIAGCDDYDIGKSKLSKLLYCRYDSYAAEAKIKCELGSIAPSTAPSMXXXXMPFQYATDAPAATVGPTVEGSAGGTLAGTQDVPVDKKGCALLYGQCAGVGFGEYCCTAGSVCIATGGIYYSQCQPPVAATQPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANAATPAPPVV 260
            MAFMRCCAVLALAAGAAGFSLRGAEQQEQHGRKLAPKLCLKEWKACKADAICNNCLENGNVPEKPKIDNATCATVDKWWDQIAFKGIAGCDDYDIGKSKLSKLLYCRYDSYAAEAKIKCELGSIAPSTAPSMXXXXMPFQYATDAPAATVGPTVEGSAGGTLAGTQDVPVDKKGCALLYGQCAGVGFGEYCCTAGSVCIATGGIYYSQCQPPVAATQPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANAATPAPPVV
Sbjct:    1 MAFMRCCAVLALAAGAAGFSLRGAEQQEQHGRKLAPKLCLKEWKACKADAICNNCLENGNVPEKPKIDNATCATVDKWWDQIAFKGIAGCDDYDIGKSKLSKLLYCRYDSYAAEAKIKCELGSIAPSTAPSMXXXXMPFQYATDAPAATVGPTVEGSAGGTLAGTQDVPVDKKGCALLYGQCAGVGFGEYCCTAGSVCIATGGIYYSQCQPPVAATQPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANAATPAPPVV 260          
BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A836CPQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPQ4_9STRA)

HSP 1 Score: 219 bits (558), Expect = 2.200e-68
Identity = 113/166 (68.07%), Postives = 127/166 (76.51%), Query Frame = 0
Query:    5 RCCAVLAL--AAGAAGFSLRGAEQQEQHGRKLAPKLCLKEWKACKADAICNNCLENGNVPEKPKIDNATCATVDKWWDQIAFKGIAGCDDYDIGKSKLSKLLYCRYDSYAAEAKIKCELGSIAPSTAPSMXXXXMPFQYATDAPAA-----TVGPTVEGSAGGTLA 163
            RCC VLAL    GAA +SLRG +++EQHGR LAPKLCLKEWK CKAD +CNNCLENGNVPEKP++  A+C TVDKWW QI F G+A CDDY+IGKSKLS LLYCRYDSY+AEAK+KCE+     S APSM    MPF YATDAPA      T GPTVE +A  TLA
Sbjct:    4 RCC-VLALLFVGGAAAYSLRGLQEKEQHGRNLAPKLCLKEWKKCKADVVCNNCLENGNVPEKPQLKGASCNTVDKWWAQIDFTGLANCDDYEIGKSKLSLLLYCRYDSYSAEAKLKCEVDE---SAAPSMVPTTMPFMYATDAPAGATDAPTAGPTVEVTAQETLA 165          
BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A836CNI0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNI0_9STRA)

HSP 1 Score: 158 bits (400), Expect = 1.450e-44
Identity = 84/147 (57.14%), Postives = 99/147 (67.35%), Query Frame = 0
Query:    6 CCAVLALAAGAAGFSLRGAEQQEQHGRKLAPKLCLKEWKACKADAICNNCLENGNVPEKPKIDNATCATVDKWWDQIAFKGIAGCDDYDIGKSKLSKLLYCRYDSYAAEAKIKCELGSIAPSTAPSMXXXX----MPFQYATDAPAA 148
            C   L   +GAA FSL G E+Q    R+L P LC KEWK CKADA+CNNCL+NGNVP+KPKI  ATC T DKWW ++ F G+ GC  +D GKS LS LLYCR+DSYA EA +KCE+ + APS     XXXX    MP  +A  AP A
Sbjct:    5 CVLALLFVSGAAAFSLHGYEKQH---RELIPALCQKEWKHCKADAVCNNCLKNGNVPQKPKIKGATCHTFDKWWYELDFTGVPGCATFDQGKSLLSLLLYCRFDSYAEEAGVKCEVATFAPSAXXXXXXXXXXXXMPLLFADGAPGA 148          
BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A836CPS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPS2_9STRA)

HSP 1 Score: 158 bits (400), Expect = 2.450e-40
Identity = 93/161 (57.76%), Postives = 107/161 (66.46%), Query Frame = 0
Query:    4 MRCCAVLALAAGAAGFSLRGAEQQ---EQH-GRKLAPKLCLKEWKACKADAICNNCLENGNVPEKPKIDN--ATCATVDKWWDQIAFKGIAGCDDYDIGKSKLSKLLYCRYDSYAAEAKIKCEL--GSIAPSTAPSMXXXXMPFQYA----TDAPAATVGP 152
            MR C +L  A GAA  SLRG E+    EQH  RKL PKLC+ EW  CKA+AICNNCLE G++PEKP +    ATC TVDKWW QIA   + GC  +D GK+ LS LLYCRYDSYAAEAK+KC++  GS APS     XXX MPF +A    T  P   VGP
Sbjct:    1 MRPCCLLLFAGGAAAVSLRGYEKGARVEQHIQRKLPPKLCVAEWTDCKANAICNNCLEKGDIPEKPTLKGPTATCDTVDKWWAQIALDDVPGCAKWDEGKTLLSLLLYCRYDSYAAEAKLKCDVADGSAAPSXXXXXXXXTMPFVFAPEDETPPPKLPVGP 161          
BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A835ZH51_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH51_9STRA)

HSP 1 Score: 117 bits (293), Expect = 7.770e-29
Identity = 50/98 (51.02%), Postives = 67/98 (68.37%), Query Frame = 0
Query:   31 GRKLAPKLCLKEWKACKADAICNNCLENGNVPEKPKIDNATCATVDKWWDQIAFKGIAGCDDYDIGKSKLSKLLYCRYDSYAAEAKIKCELGSIAPST 128
            G  L  K+C KEW ACKAD +C+ CL+ G++P KP +  A C  +  WWD+I FKG   C DY  G+S +SKLLYCR+DS+  + K++CE G+ APST
Sbjct:   74 GEILPVKVCGKEWLACKADDVCSLCLKKGDIPPKPSLKAADCDLLTNWWDEIDFKGEPACADYMEGESLISKLLYCRFDSWGQQVKLQCEAGTFAPST 171          
BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A836CLS7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLS7_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 6.210e-12
Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = 0
Query:   38 LCLKEWKACKADAICNNCLENGNVPEKPKIDNATCATVDKWWDQIAFKGIAGCDDYDIGKSKLSKLLYCRYDSYAAEAKIKC 119
            +CL++  AC+AD  C+ C+++G +P +P  D   C  + KW   ++F   A C  +  G +KLS L+YCR+D+YA EA +KC
Sbjct:   38 VCLQQTAACEADPTCSACVQSGTIPPRP-ADVTACVDLQKWLAAVSFPQPAKCK-FLFGGTKLSDLIYCRFDTYAEEAGLKC 117          
BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A835YQS7_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS7_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.550e-11
Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 0
Query:  170 VDKKGCALLYGQCAGVGFGEYCCTAGSVCIATGGIYYSQCQP 211
            +D  GCAL Y QCAGVGFG++CCT G+ C+ TGGIYYSQCQP
Sbjct:  579 LDANGCALEYAQCAGVGFGKFCCTKGTQCVQTGGIYYSQCQP 620          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350160 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A835YPP1_9STRA4.900e-161100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CPQ4_9STRA2.200e-6868.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CNI0_9STRA1.450e-4457.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CPS2_9STRA2.450e-4057.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZH51_9STRA7.770e-2951.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CLS7_9STRA6.210e-1240.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YQS7_9STRA2.550e-1171.43Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..260

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_57contigContig_57:672837..677267 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350160mRNA_8637Tribonema minus UTEX_B_3156 mRNAContig_57 672818..677901 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350160|estExt_Genemark1.C_Ctg_570088 ID=Trimin1|350160|estExt_Genemark1.C_Ctg_570088|Name=jgi.p|Trimin1|350160|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=261bp
MAFMRCCAVLALAAGAAGFSLRGAEQQEQHGRKLAPKLCLKEWKACKADA
ICNNCLENGNVPEKPKIDNATCATVDKWWDQIAFKGIAGCDDYDIGKSKL
SKLLYCRYDSYAAEAKIKCELGSIAPSTAPSMVPTTMPFQYATDAPAATV
GPTVEGSAGGTLAGTQDVPVDKKGCALLYGQCAGVGFGEYCCTAGSVCIA
TGGIYYSQCQPPVAATQPPQPPATSGATSGGGSGSSNSGTLGGSSASSGA
NAATPAPPVV*
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