mRNA_8637 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|350160
Unique Name	mRNA_8637
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A835YPP1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP1_9STRA)

HSP 1 Score: 455 bits (1171), Expect = 2.580e-157
Identity = 259/260 (99.62%), Postives = 259/260 (99.62%), Query Frame = 2

Query:   20 MAFMRCCAVLALAAGAAGFSLRGAEQQEQHGRKLAPKLCLKEWKACKADAICNNCLENGNVPEKPKIDNATCATVDKWWDQIAFKGIAGCDDYDIGKSKLSKLLYCRYDSYAAEAKIKCELGSIAPSTAPSMXXXXMPFQYATDAPAATVGPTVEGSAGGTLAGTQDVPVDKKGCALLYGQCAGVGFGEYCCTAGSVCIATGGIYYSQCQPPVAATQPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANAATPAPPVV 799
            MAFMRCCAVLALAAGAAGFSLRGAEQQEQHGRKLAPKLCLKEWKACKADAICNNCLENGNVPEKPKIDNATCATVDKWWDQIAFKGIAGCDDYDIGKSKLSKLLYCRYDSYAAEAKIKCELGSIAPSTAPSMXXXXMPFQYATDAPAATVGPTVEGSAGGTLAGTQDVPVDKKGCALLYGQCAGVGFGEYCCTAGSVCIATGGIYYSQCQPPVAATQPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXX ANAATPAPPVV
Sbjct:    1 MAFMRCCAVLALAAGAAGFSLRGAEQQEQHGRKLAPKLCLKEWKACKADAICNNCLENGNVPEKPKIDNATCATVDKWWDQIAFKGIAGCDDYDIGKSKLSKLLYCRYDSYAAEAKIKCELGSIAPSTAPSMXXXXMPFQYATDAPAATVGPTVEGSAGGTLAGTQDVPVDKKGCALLYGQCAGVGFGEYCCTAGSVCIATGGIYYSQCQPPVAATQPPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANAATPAPPVV 260

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BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A836CPQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPQ4_9STRA)

HSP 1 Score: 221 bits (562), Expect = 4.150e-66
Identity = 113/166 (68.07%), Postives = 127/166 (76.51%), Query Frame = 2

Query:   32 RCCAVLAL--AAGAAGFSLRGAEQQEQHGRKLAPKLCLKEWKACKADAICNNCLENGNVPEKPKIDNATCATVDKWWDQIAFKGIAGCDDYDIGKSKLSKLLYCRYDSYAAEAKIKCELGSIAPSTAPSMXXXXMPFQYATDAPAA-----TVGPTVEGSAGGTLA 508
            RCC VLAL    GAA +SLRG +++EQHGR LAPKLCLKEWK CKAD +CNNCLENGNVPEKP++  A+C TVDKWW QI F G+A CDDY+IGKSKLS LLYCRYDSY+AEAK+KCE+     S APSM    MPF YATDAPA      T GPTVE +A  TLA
Sbjct:    4 RCC-VLALLFVGGAAAYSLRGLQEKEQHGRNLAPKLCLKEWKKCKADVVCNNCLENGNVPEKPQLKGASCNTVDKWWAQIDFTGLANCDDYEIGKSKLSLLLYCRYDSYSAEAKLKCEVDE---SAAPSMVPTTMPFMYATDAPAGATDAPTAGPTVEVTAQETLA 165

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BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A836CNI0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNI0_9STRA)

HSP 1 Score: 160 bits (404), Expect = 8.630e-43
Identity = 84/147 (57.14%), Postives = 99/147 (67.35%), Query Frame = 2

Query:   35 CCAVLALAAGAAGFSLRGAEQQEQHGRKLAPKLCLKEWKACKADAICNNCLENGNVPEKPKIDNATCATVDKWWDQIAFKGIAGCDDYDIGKSKLSKLLYCRYDSYAAEAKIKCELGSIAPSTAPSMXXXX----MPFQYATDAPAA 463
            C   L   +GAA FSL G E+Q    R+L P LC KEWK CKADA+CNNCL+NGNVP+KPKI  ATC T DKWW ++ F G+ GC  +D GKS LS LLYCR+DSYA EA +KCE+ + APS     XXXX    MP  +A  AP A
Sbjct:    5 CVLALLFVSGAAAFSLHGYEKQH---RELIPALCQKEWKHCKADAVCNNCLKNGNVPQKPKIKGATCHTFDKWWYELDFTGVPGCATFDQGKSLLSLLLYCRFDSYAEEAGVKCEVATFAPSAXXXXXXXXXXXXMPLLFADGAPGA 148

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BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A836CPS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPS2_9STRA)

HSP 1 Score: 160 bits (404), Expect = 2.340e-38
Identity = 93/161 (57.76%), Postives = 107/161 (66.46%), Query Frame = 2

Query:   29 MRCCAVLALAAGAAGFSLRGAEQQ---EQH-GRKLAPKLCLKEWKACKADAICNNCLENGNVPEKPKIDN--ATCATVDKWWDQIAFKGIAGCDDYDIGKSKLSKLLYCRYDSYAAEAKIKCEL--GSIAPSTAPSMXXXXMPFQYA----TDAPAATVGP 475
            MR C +L  A GAA  SLRG E+    EQH  RKL PKLC+ EW  CKA+AICNNCLE G++PEKP +    ATC TVDKWW QIA   + GC  +D GK+ LS LLYCRYDSYAAEAK+KC++  GS APS     XXX MPF +A    T  P   VGP
Sbjct:    1 MRPCCLLLFAGGAAAVSLRGYEKGARVEQHIQRKLPPKLCVAEWTDCKANAICNNCLEKGDIPEKPTLKGPTATCDTVDKWWAQIALDDVPGCAKWDEGKTLLSLLLYCRYDSYAAEAKLKCDVADGSAAPSXXXXXXXXTMPFVFAPEDETPPPKLPVGP 161

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BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A835ZH51_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH51_9STRA)

HSP 1 Score: 117 bits (293), Expect = 4.250e-27
Identity = 63/161 (39.13%), Postives = 85/161 (52.80%), Query Frame = 2

Query:   44 VLALAAGAAGFSLRGAEQQEQHGRKLAP-----------------------------------------KLCLKEWKACKADAICNNCLENGNVPEKPKIDNATCATVDKWWDQIAFKGIAGCDDYDIGKSKLSKLLYCRYDSYAAEAKIKCELGSIAPST 403
            +LALAA    +SLRG ++Q+Q  R LAP                                         K+C KEW ACKAD +C+ CL+ G++P KP +  A C  +  WWD+I FKG   C DY  G+S +SKLLYCR+DS+  + K++CE G+ APST
Sbjct:   12 LLALAADCGAWSLRGGQRQKQK-RALAPAAGKXXXXXXXXXXXXXXXXXXXXXXXXXXLVGPDGEILPVKVCGKEWLACKADDVCSLCLKKGDIPPKPSLKAADCDLLTNWWDEIDFKGEPACADYMEGESLISKLLYCRFDSWGQQVKLQCEAGTFAPST 171

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BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A836CLS7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLS7_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 3.850e-11
Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = 2

Query:  131 LCLKEWKACKADAICNNCLENGNVPEKPKIDNATCATVDKWWDQIAFKGIAGCDDYDIGKSKLSKLLYCRYDSYAAEAKIKC 376
            +CL++  AC+AD  C+ C+++G +P +P  D   C  + KW   ++F   A C  +  G +KLS L+YCR+D+YA EA +KC
Sbjct:   38 VCLQQTAACEADPTCSACVQSGTIPPRP-ADVTACVDLQKWLAAVSFPQPAKCK-FLFGGTKLSDLIYCRFDTYAEEAGLKC 117

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BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A835YQS7_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS7_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.580e-10
Identity = 30/42 (71.43%), Postives = 35/42 (83.33%), Query Frame = 2

Query:  527 VDKKGCALLYGQCAGVGFGEYCCTAGSVCIATGGIYYSQCQP 652
            +D  GCAL Y QCAGVGFG++CCT G+ C+ TGGIYYSQCQP
Sbjct:  579 LDANGCALEYAQCAGVGFGKFCCTKGTQCVQTGGIYYSQCQP 620

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BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A836CBI5_9STRA (Putative kinesin family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI5_9STRA)

HSP 1 Score: 828 bits (2138), Expect = 1.970e-298
Identity = 523/523 (100.00%), Postives = 523/523 (100.00%), Query Frame = 1

Query:    1 MVVPAAAARPSRLPTPQAEEQLTALAAAKEGLEQLLTEEKAVALLQQTRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKFDGAHVYNETLRDLLASESSSGDCTARTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPCDSARGESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSARTHKRHA 1569
            MVVPAAAARPSRLPTPQAEEQLTALAAAKEGLEQLLTEEKAVALLQQTRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKFDGAHVYNETLRDLLASESSSGDCTARTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPCDSARGESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSARTHKRHA
Sbjct:    1 MVVPAAAARPSRLPTPQAEEQLTALAAAKEGLEQLLTEEKAVALLQQTRLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKFDGAHVYNETLRDLLASESSSGDCTARTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPCDSARGESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSARTHKRHA 523

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BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A7J9HPY3_9ROSI (Kinesin-like protein (Fragment) n=1 Tax=Gossypium harknessii TaxID=34285 RepID=A0A7J9HPY3_9ROSI)

HSP 1 Score: 352 bits (902), Expect = 1.610e-111
Identity = 207/398 (52.01%), Postives = 264/398 (66.33%), Query Frame = 1

Query:  397 KIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKF----DGAHVYNETLRDLLASESSSGDCTARTLD--------IKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPCDSARGESR-RGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSAR 1551
            ++A++E   I  E  R++LHNTI ELKGNIRVF RVRPLL    D  A AEDA         ++ P++         LG   D +       + + F FD+VF   ASQ+DVF +ISQLVQS LDGYKVC+FAYGQTGSGKT+TM  G PEA E +G+IPR++ QIF + +A++E GWK+        +YNET+RDLL++  SSG  + R  +        IKH   GNT V+ L+  +++S  +++ LLR+AA++R+ G T  N  SSRSH VF L +   +   E + +G L ++DLAGSERL +SGA G RLKETQAINKSLS L DVIFALA  E HVP+RNSKLTYLLQ  LGGDSK LM VNVSP+P    E+LCSLRFA +VN+CEIG  R
Sbjct:  121 RLADMEHRLIDGENLRKKLHNTILELKGNIRVFCRVRPLLP---DDGAAAEDA--------IVSYPTSTES------LGRGVDLIQS----GQKYPFTFDKVFNHEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTM-MGRPEASEQKGLIPRSLEQIFQSSQALREQGWKYKMQASMLEIYNETIRDLLSNNRSSGSDSTRPENSVSGKQYTIKHDANGNTYVSDLTIVDVSSISEISSLLRQAAQSRSVGRTQMNEQSSRSHMVFTLRISGINESTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSCLSDVIFALARKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNVSPDPSSVGESLCSLRFAARVNACEIGVPR 496

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BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A1R3I267_COCAP (Kinesin-like protein n=2 Tax=Corchorus TaxID=93758 RepID=A0A1R3I267_COCAP)

HSP 1 Score: 357 bits (916), Expect = 2.700e-110
Identity = 204/392 (52.04%), Postives = 263/392 (67.09%), Query Frame = 1

Query:  397 KIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKF----DGAHVYNETLRDLLASE---SSSGDCTARTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVP-CDSARGESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSA 1548
            ++AE+E   I  E+ R+RLHNTI ELKGNIRVF RVRPLL             D AAT    ++ P++      +  LG   D +         + F FD+VF   ASQ+D+F +ISQLVQS LDGYKVC+FAYGQTGSGKT+TM  G PEA+E +G+IPR++ QIF + ++++  GWK+        +YNET+RDLL+     +S    + +   IKH   GNT V+ L+  +++S  +++ LLR+AA++R+ G TH N  SSRSH VF L +   + A  +  +G L ++DLAGSERL +SGA G RLKETQAINKSLS+L DVIFALA  E HVPYRNSKLTYLLQ  LGGDSK LM VNVSP+P    E+LCSLRFA +VNSCEIG+A
Sbjct:  411 RLAEMEQKLIEGEDLRKRLHNTILELKGNIRVFCRVRPLLPD-----------DGAATEAPVISYPTS------VESLGRGIDLIQS----GNKYPFTFDKVFDHEASQQDIFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTM-MGRPEAQEEKGLIPRSLEQIFQSSQSLQAQGWKYKMQASMLEIYNETIRDLLSINRPIASESAVSGKQYTIKHDANGNTHVSDLTVVDVSSIAEISSLLRQAAQSRSVGRTHMNEQSSRSHMVFTLRISGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEEHVPYRNSKLTYLLQPCLGGDSKTLMFVNVSPDPTSVGESLCSLRFAARVNSCEIGTA 780

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BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A4P9WYM2_9FUNG (Kinesin-like protein (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9WYM2_9FUNG)

HSP 1 Score: 342 bits (876), Expect = 2.750e-109
Identity = 213/394 (54.06%), Postives = 253/394 (64.21%), Query Frame = 1

Query:  400 IAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAK--SWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEE--HRGMIPRAVAQIFATMEAMKEGGWKFDGA----HVYNETLRDLLASESSSGDCTARTLDIKH-GREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPC-DSARGESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSAR 1551
            +A+LE     HE  RRR+HNTI ELKGNIRVF RVRP L    +    A+D   A    +             LTL+    D+V GDR  AK   + FQFDRVF P + Q +VF +ISQLVQS LDGY VC+FAYGQTGSGKT+TM  G  +A +  HRGMIPRAVAQIF     +K  GW +        +YNE LRDLLA  +S      + LDIKH      TTV   +  ++AS   V  LL RA   RA  AT+ N  SSRSHSVF L +   +   GE   G L ++DLAGSERL  SG+ G RLKETQAINKSLS+LGDVI ALAN + H+PYRNSKLTYLLQ+SLGG+SK LM VN+SP P +  ETLCSLRFA KVN+C+IG+AR
Sbjct:   13 VADLEAKLRDHEMIRRRMHNTILELKGNIRVFCRVRPPLPR--EQALAAQDGHAAPLSHI-----------HSLTLVQTV-DSVQGDRASAKRREFPFQFDRVFRPESEQSEVFDEISQLVQSALDGYNVCIFAYGQTGSGKTFTM-EGPEDANDLRHRGMIPRAVAQIFEHANELKSKGWTYTFEITFLEIYNEQLRDLLAVHASE----PKRLDIKHLPGTTKTTVTEATVVQVASPAAVTVLLNRARANRAVAATNMNERSSRSHSVFTLRLAGKNQITGEDGEGVLNLIDLAGSERLSASGSTGDRLKETQAINKSLSSLGDVIMALANKDPHIPYRNSKLTYLLQNSLGGNSKTLMFVNISPLPVNLQETLCSLRFATKVNNCQIGTAR 387

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BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: E1ZMP5_CHLVA (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZMP5_CHLVA)

HSP 1 Score: 340 bits (873), Expect = 5.600e-109
Identity = 211/392 (53.83%), Postives = 256/392 (65.31%), Query Frame = 1

Query:  397 KIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPS-NDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKFDGA----HVYNETLRDLLASESSSGDCTARTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPCDSAR-GESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGG-DSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSAR 1551
            ++AE E   +  E  RRRLHNTIQELKGNIRVF RVRP         AE E A+ AA G   +A P+  D   R L L  P      G+R +A++  F FD+VF P ASQ +VF +ISQLVQS LDGYKVC+FAYGQTGSGKT TM  GS   ++  GMIPRA+ Q+FA  + +   GW+++       +YNE LRDLL     +G   A    + H  +G TTV+ L   +++  E V  LL RA R R+ GAT  N  SSRSH VFQL +   +A  G+  +G L ++DLAGSERL +S   G RLKETQAINKSL+ALGDVI AL N E HVPYRNSKLTYLLQ SLGG +SK LM VNVSP  +   ETLCSLRFA KVN+CEIG+A+
Sbjct:    6 QLAEAERKVVEGEAVRRRLHNTIQELKGNIRVFCRVRP--------AAEGEGAE-AAPGRPVVAYPAAGDLVGRGLELCQPGGGAGKGER-DAQAHSFGFDKVFAPGASQGEVFEEISQLVQSALDGYKVCIFAYGQTGSGKTHTM-MGS---QQEPGMIPRAMNQVFAAAKELAAQGWRYEMRAAMLEIYNEELRDLLGKGPPAGKKHA----VSHDDKGGTTVSHLDYVDVSQPERVAALLERAMRQRSVGATAMNDQSSRSHMVFQLQIEGANAETGQKAKGLLNLIDLAGSERLSRSAVTGERLKETQAINKSLAALGDVIAALGNKEAHVPYRNSKLTYLLQTSLGGANSKTLMFVNVSPSAESAQETLCSLRFAAKVNACEIGTAK 379

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BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A137P3Y5_CONC2 (Kinesin-like protein (Fragment) n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137P3Y5_CONC2)

HSP 1 Score: 342 bits (876), Expect = 9.920e-109
Identity = 193/375 (51.47%), Postives = 248/375 (66.13%), Query Frame = 1

Query:  442 RRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKF--DGAHV--YNETLRDLLASESSSGDCTARTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPC-DSARGESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSAR 1551
            RR+LHNTIQELKGNIRVF RVRP L++   +  E     +          P  D + +++ +   + +  +G     K   F FDRVFGP   Q  VF +I+QL+QS LDGY VC+FAYGQTGSGKT+TM   +       GMIPRAV QIF T  A+KE GW +  +G +V  YNE + DLL + + +     +  DI+H   G TTV+ ++   + S E V+ LL +A + RA  AT+SN  SSRSHSVF L +   +S  GES  G L ++DLAGSERL +SG+ G RLKETQAINKSLS+LGDVI ALA+   H+PYRNSKLTYLLQ+SLGG+SK LM VN+SP  +H  ET+CSLRFA KVN+C+IG+A+
Sbjct:   65 RRKLHNTIQELKGNIRVFCRVRPPLDSEIKSNVENPPLSH-------FKFPDLDLDSKQIEI-NQSYENALGKTISGKPLPFAFDRVFGPSTDQAQVFEEINQLIQSALDGYPVCIFAYGQTGSGKTFTMEGPNNHDPNLMGMIPRAVNQIFDTATALKEKGWNYSMEGQYVEIYNENIHDLLTNSNDN-----QKYDIRHDSNGKTTVSNITVANVESPESVHKLLDKARKNRAVAATNSNERSSRSHSVFTLRLSGKNSITGESSEGVLNLIDLAGSERLAQSGSTGDRLKETQAINKSLSSLGDVIGALASQASHIPYRNSKLTYLLQNSLGGNSKTLMFVNISPLTEHCGETICSLRFATKVNNCQIGTAK 426

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BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A2I0WMP0_9ASPA (Kinesin-1 n=3 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0WMP0_9ASPA)

HSP 1 Score: 353 bits (906), Expect = 2.180e-108
Identity = 207/402 (51.49%), Postives = 263/402 (65.42%), Query Frame = 1

Query:  400 IAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKF----DGAHVYNETLRDLLA-SESSSGDCTA--RTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVP-CDSARGESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSARTHKRHA*SDS 1581
            + +LE   +  E+ R++LHNTI ELKGNIRVF RVRP+L           D DY    G+ ++ P++      +  LG   D +      A++  F FD+VFG  ASQEDVF +ISQLVQS LDGYKVC+FAYGQTGSGKT+TM  G PEA E +G+IPR++ QIF T +A+K  GWK+        +YNET+RDLL+ +   S D T   +   IKH   GNT V+ L+  ++ S  +V+ LL +AA++R+ G T  N  SSRSH VF L +   + A  +  +G L ++DLAGSERL KSG+ G RLKETQAINKSLS L DVIFA+A  E HVPYRNSKLTYLLQ  LGGDSK LM VN+SPE     E++CSLRFA +VN+CEIG  R H +    DS
Sbjct:  452 VIDLEYQLVEAEKLRKKLHNTILELKGNIRVFCRVRPVLP----------DIDYRGDDGIVVSYPTS------VECLGRGIDLMHN----AQNHSFTFDKVFGHEASQEDVFFEISQLVQSALDGYKVCIFAYGQTGSGKTYTM-MGKPEAHEQKGLIPRSLEQIFETSQALKYQGWKYKMQASMLEIYNETIRDLLSPNRCGSTDATHANKQYSIKHDSTGNTLVSDLTVVDVCSINEVSFLLNQAAQSRSVGKTQMNEQSSRSHFVFTLRISGMNDATEQQVQGILNLIDLAGSERLAKSGSTGDRLKETQAINKSLSCLSDVIFAIAKKEDHVPYRNSKLTYLLQPCLGGDSKTLMFVNISPEASSANESICSLRFAARVNACEIGVPRRHTQMRPLDS 832

[Close]

BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A8J4V2I7_9ROSI (Kinesin-like protein n=2 Tax=Castanea mollissima TaxID=60419 RepID=A0A8J4V2I7_9ROSI)

HSP 1 Score: 343 bits (879), Expect = 4.270e-108
Identity = 202/398 (50.75%), Postives = 258/398 (64.82%), Query Frame = 1

Query:  397 KIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKF----DGAHVYNETLRDLLASESSSGDCTARTLD--------IKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPCDSARGESR-RGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSAR 1551
            ++A+ E   I  E+ R++LHNTI ELKGNIRVF RVRPLL             D   T    +A P++         LG   D V   +   + + F FD+VF   ASQ+DVF +ISQLVQS LDGYKVC+FAYGQTGSGKT+TM  G PE    +G+IPR++ QIF T ++++  GWK+        +YNET+RDLL++  SSG   +RT +        IKH   GNT V+ L+  ++ S  +++ LL++AA +R+ G T  N  SSRSH VF L +   +   E + +G L ++DLAGSERL KSG+ G RLKETQAINKSLS+L DVIFALA  E HVP+RNSKLTYLLQ  LGGDSK LM VN+SP+P    E+LCSLRFA +VNSCEIG  R
Sbjct:  121 RLADAEFQLIEGEKLRKKLHNTILELKGNIRVFCRVRPLLPE-----------DGVGTEATVIAYPTS------TETLGRGIDLV---QSAGQRYPFTFDKVFSHEASQQDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTM-MGRPETSVQKGLIPRSLEQIFQTSQSLQAQGWKYKMQASMLEIYNETIRDLLSTNRSSGLDMSRTENGAPGKQYTIKHDVNGNTHVSDLTIVDVCSINEISSLLQQAAHSRSVGRTQMNEQSSRSHFVFTLRISGVNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLADVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSVGESLCSLRFAARVNSCEIGIPR 497

[Close]

BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A453C4F4_AEGTS (Kinesin-like protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453C4F4_AEGTS)

HSP 1 Score: 339 bits (870), Expect = 6.920e-108
Identity = 197/391 (50.38%), Postives = 251/391 (64.19%), Query Frame = 1

Query:  397 KIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKF----DGAHVYNETLRDLLA-SESSSGDCTARTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHV-PCDSARGESRRGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSAR 1551
            ++ E E   +  E+ R++LHNTI ELKGNIRVF RVRPLL   +                  ++ P+N     R   L              +S+ F FD+VF   ASQEDVF +ISQLVQS LDGYKVC+FAYGQTGSGKT TM  G+PE  + +G+IPR++ QIF T + +   GWK+        +YNET+RDLLA S +S  D  A   +IKH   GNT V+ L+  ++ S  +V+ LL+RAA++R+ G T  N  SSRSH VF L +   +    +  +G L ++DLAGSERL+KSGA G RLKETQAINKSLS L DVIF++A  E H+P+RNSKLTYLLQ  LGGDSK LM VN+SPE    +E++CSLRFA +VNSCEIG  R
Sbjct:   53 RLTEAEQKIVDGEKLRKKLHNTILELKGNIRVFCRVRPLLSNESGA----------------VSYPNNGENIGRGVEL----------MHNTQSYSFAFDKVFDHSASQEDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTHTM-MGNPEFNDQKGLIPRSLEQIFQTSQCLMSQGWKYKMQASMLEIYNETIRDLLATSRTSIQDGAASKYNIKHDANGNTQVSDLTIVDVRSINEVSSLLKRAAQSRSVGKTQMNEESSRSHCVFTLRIFGVNEGTDQQVQGVLNLIDLAGSERLNKSGATGDRLKETQAINKSLSCLSDVIFSIAKKEEHIPFRNSKLTYLLQPCLGGDSKTLMFVNLSPEVSSTSESICSLRFAARVNSCEIGVPR 416

[Close]

BLAST of jgi.p|Trimin1|350160 vs. uniprot
Match: A0A0V0IUK2_SOLCH (Putative kinesin-1-like n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0IUK2_SOLCH)

HSP 1 Score: 344 bits (882), Expect = 7.400e-108
Identity = 200/401 (49.88%), Postives = 260/401 (64.84%), Query Frame = 1

Query:  397 KIAELEGTEIAHEEERRRLHNTIQELKGNIRVFARVRPLLEASTDTTAEAEDADYAATGGLTLAIPSNDPEHRRLTLLGPARDTVVGDRGEAKSWDFQFDRVFGPHASQEDVFRDISQLVQSVLDGYKVCLFAYGQTGSGKTWTMGTGSPEAEEHRGMIPRAVAQIFATMEAMKEGGWKFDGA----HVYNETLRDLLAS-ESSSGDCTARTLDIKHGREGNTTVAGLSKHEIASAEDVNGLLRRAARARATGATHSNAHSSRSHSVFQLHVPCDSARGESR-RGCLTMVDLAGSERLDKSGAEGGRLKETQAINKSLSALGDVIFALANGERHVPYRNSKLTYLLQHSLGGDSKVLMLVNVSPEPQHQAETLCSLRFAHKVNSCEIGSARTHKRHA*SDS 1581
            ++ + E   +  E+ R++LHNTI ELKGNIRVF RVRPLL             D        ++ PS+        +    R   +   G+  S  F FD+VF P ASQEDVF +ISQLVQS LDGYKVC+FAYGQTGSGKT TM  G+PE+ E++G+IPR + Q+F T ++++  GWK++       +YNET+RDLL+  + S  +   +   IKH   G+T V+ L+  ++ S+  V+ LLRRAA++R+ G T  N +SSRSH VF L +   +   E + +G L ++DLAGSERL KSG+ G RLKETQAINKSLS+L DVIFALA  E HVP+RNSKLTYLLQ  LGGDSK LM VNV+P+P    E+LCSLRFA +VN+CEIG  R       SDS
Sbjct:  183 RLVDAETKVVEGEKLRKKLHNTILELKGNIRVFCRVRPLLSE-----------DGVGAEANVVSFPSS--------MEAQGRGIDLAQNGQKHS--FTFDKVFTPEASQEDVFVEISQLVQSALDGYKVCIFAYGQTGSGKTHTM-MGNPESAENKGLIPRTLEQVFETRQSLQAQGWKYEMQVSMLEIYNETIRDLLSGFDXSRPENGGKQYTIKHDANGHTHVSDLTVVDVQSSSKVSSLLRRAAQSRSVGKTQMNENSSRSHFVFTLRISGVNESTEQQVQGILNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEEHVPFRNSKLTYLLQPCLGGDSKTLMFVNVAPDPSSTGESLCSLRFAARVNACEIGIPRRQTSMRSSDS 561

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350160 vs. uniprot
BLAST of jgi.p|Trimin1|350160 vs. uniprot

BLAST of jgi.p|Trimin1|350160 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7


Match Name	E-value	Identity	Description
A0A835YPP1_9STRA	2.580e-157	99.62	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CPQ4_9STRA	4.150e-66	68.07	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CNI0_9STRA	8.630e-43	57.14	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CPS2_9STRA	2.340e-38	57.76	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZH51_9STRA	4.250e-27	39.13	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CLS7_9STRA	3.850e-11	40.24	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YQS7_9STRA	2.580e-10	71.43	Glycoside hydrolase superfamily n=1 Tax=Tribonema ...	[more]

BLAST of jgi.p|Trimin1|350160 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CBI5_9STRA	1.970e-298	100.00	Putative kinesin family protein n=1 Tax=Tribonema ...	[more]
A0A7J9HPY3_9ROSI	1.610e-111	52.01	Kinesin-like protein (Fragment) n=1 Tax=Gossypium ...	[more]
A0A1R3I267_COCAP	2.700e-110	52.04	Kinesin-like protein n=2 Tax=Corchorus TaxID=93758...	[more]
A0A4P9WYM2_9FUNG	2.750e-109	54.06	Kinesin-like protein (Fragment) n=1 Tax=Caulochytr...	[more]
E1ZMP5_CHLVA	5.600e-109	53.83	Kinesin motor domain-containing protein (Fragment)...	[more]
A0A137P3Y5_CONC2	9.920e-109	51.47	Kinesin-like protein (Fragment) n=1 Tax=Conidiobol...	[more]
A0A2I0WMP0_9ASPA	2.180e-108	51.49	Kinesin-1 n=3 Tax=Dendrobium catenatum TaxID=90668...	[more]
A0A8J4V2I7_9ROSI	4.270e-108	50.75	Kinesin-like protein n=2 Tax=Castanea mollissima T...	[more]
A0A453C4F4_AEGTS	6.920e-108	50.38	Kinesin-like protein n=2 Tax=Aegilops tauschii sub...	[more]
A0A0V0IUK2_SOLCH	7.400e-108	49.88	Putative kinesin-1-like n=1 Tax=Solanum chacoense ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_57	contig	Contig_57:672818..677901 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|350160\|estExt_Genemark1.C_Ctg_570088
Hectar predicted targeting category	signal peptide
TranscriptId	350482
Track	FilteredModels1
ProteinId	350160

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350160	gene_8637	Tribonema minus UTEX_B_3156	gene	Contig_57 672818..677901 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350160	Trimin1\|350160\|estExt_Genemark1.C_Ctg_570088	Tribonema minus UTEX_B_3156	polypeptide	Contig_57 672837..677267 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_8637_1	exon_8637_1	Tribonema minus UTEX_B_3156	exon	Contig_57 672818..672917 +
exon_8637_2	exon_8637_2	Tribonema minus UTEX_B_3156	exon	Contig_57 673772..673801 +
exon_8637_3	exon_8637_3	Tribonema minus UTEX_B_3156	exon	Contig_57 674383..674723 +
exon_8637_4	exon_8637_4	Tribonema minus UTEX_B_3156	exon	Contig_57 675624..675763 +
exon_8637_5	exon_8637_5	Tribonema minus UTEX_B_3156	exon	Contig_57 677077..677901 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_8637	UTR5_8637	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_57 672818..672836 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_8637	CDS_8637	Tribonema minus UTEX_B_3156	CDS	Contig_57 672837..672917 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_8637	UTR3_8637	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_57 677268..677901 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_57:672818..677901+
coding sequence from alignment at Contig_57:672818..677901+

spliced messenger RNA

>mRNA_8637 ID=mRNA_8637|Name=jgi.p|Trimin1|350160|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1436bp|location=Sequence derived from alignment at Contig_57:672818..677901+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GTTCTAGCAGCAGGAACAGATGGCGTTCATGCGGTGTTGTGCTGTCCTCG
CCCTGGCTGCCGGAGCTGCGGGTTTCTCGCTGAGGGGGGCGGAACAGCAG
GAGCAACATGGCAGGAAGCTTGCACCGAAGCTCTGCCTGAAGGAGTGGAA
GGCGTGCAAAGCGGACGCCATCTGCAACAACTGTCTGGAGAACGGCAATG
TACCTGAGAAGCCCAAGATTGACAACGCCACCTGCGCGACCGTCGACAAG
TGGTGGGACCAGATCGCCTTCAAGGGCATCGCTGGCTGTGACGACTACGA
CATTGGCAAGAGCAAGCTGTCCAAGCTGCTGTACTGCCGTTACGACAGCT
ACGCTGCTGAGGCCAAGATCAAGTGTGAACTCGGCAGCATTGCTCCGAGC
ACCGCCCCGTCCATGGTCCCCACGACCATGCCCTTCCAGTACGCCACGGA
CGCGCCCGCGGCGACCGTCGGGCCCACAGTTGAGGGCTCTGCGGGCGGCA
CGCTGGCGGGCACGCAGGATGTGCCCGTGGACAAGAAGGGCTGCGCGCTG
CTGTACGGACAGTGCGCGGGCGTCGGCTTTGGCGAATACTGCTGCACCGC
TGGCTCAGTATGCATTGCCACTGGCGGCATCTACTACTCCCAGTGCCAGC
CCCCGGTGGCCGCCACCCAGCCCCCGCAGCCGCCTGCCACCAGCGGCGCC
ACCAGCGGCGGCGGCAGCGGCAGCAGCAACAGCGGCACACTCGGCGGCAG
CAGCGCTTCTAGCGGCGCAAACGCAGCCACCCCCGCGCCCCCTGTAGTTT
AGAATCCTTCCGGTAGAGAGAGTTGGAGAGCGCCCTCGCGAGGGGCGGCG
GCTTCGCTGAGTTGAGCGCTGAGACGATAGCGGAGCGTCGCCGCCGCCCA
TTTCTGCGGCGGCGCGGCTCATAGTTGAAGTAGAGGCGCGCAACCCACTT
CCACACGCAAACACACACACACACATGCGCGCTTTCCCCGGCCAGTCGGC
CGTGCGCGCTGCGCTGCCGCCGCTGCCGCTGCTGCAGGGAGCGAGCGCGT
GCTGCTGCCGCGGCGGCGGCCGCGCCAGTCCCGCCCACGTTTACTATCAT
GATCGAAGACGCCTCTCGCACGAGGTTTTTTGTGTTTGCGAGCGAGCCGG
CCGCTTGCGGCATTGCTCAGGACTATCTCCTTTTGGTTATTGGACACACC
GTCGCCACCCCCCCGCTGTCCTATGCGCCCCCCCCCCCCACCCCCTTCTT
CGCACACTTTTGTTTATGAGGTCACGAGTTGCATTGGGCCAATGCCTACA
AGACGTGTGCATGCTCCAAGCGTGTGCATGTCTCAAGTGCATGCCACCAA
AGTGGCACCCGCGAGCGCGGTGGCAGGTGCAGCACACCCCACGTTACAAC
CCGAATTTGTCATAATACACCCACATGTTTAACATA

protein sequence of jgi.p|Trimin1|350160

>Trimin1|350160|estExt_Genemark1.C_Ctg_570088 ID=Trimin1|350160|estExt_Genemark1.C_Ctg_570088|Name=jgi.p|Trimin1|350160|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=261bp
MAFMRCCAVLALAAGAAGFSLRGAEQQEQHGRKLAPKLCLKEWKACKADA
ICNNCLENGNVPEKPKIDNATCATVDKWWDQIAFKGIAGCDDYDIGKSKL
SKLLYCRYDSYAAEAKIKCELGSIAPSTAPSMVPTTMPFQYATDAPAATV
GPTVEGSAGGTLAGTQDVPVDKKGCALLYGQCAGVGFGEYCCTAGSVCIA
TGGIYYSQCQPPVAATQPPQPPATSGATSGGGSGSSNSGTLGGSSASSGA
NAATPAPPVV*

mRNA from alignment at Contig_57:672818..677901+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_8637 ID=mRNA_8637|Name=jgi.p|Trimin1|350160|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5084bp|location=Sequence derived from alignment at Contig_57:672818..677901+ (Tribonema minus UTEX_B_3156 )
GTTCTAGCAGCAGGAACAGATGGCGTTCATGCGGTGTTGTGCTGTCCTCG
CCCTGGCTGCCGGAGCTGCGGGTTTCTCGCTGAGGGGGGCGGAACAGCAG
GTGAGGCGCTGAGGTTTTGATTTCCGATTTCCCGGGCTAATCAAAGGTCT
CGTTAGCATGCAGCATCGCGCGAGATCAGAGAGAGCGCCACTTGCTGAGA
GTGTCTCAGACTAAGTGGCAGAGCATGCAAGACTTTGCGGGAGCTGCGGA
TCACGTGAAGAGCAACTTCGGCTTTGCGCAGGCGTCAGCAGAGATGTGCT
GAAGAAAGCCTTCGCGACGCACCTGCCTTATCGCAATGAGCCGCATGACA
GCTGGCCATACGTTGACATTCGCGCAGCTTGCAGTCGGCACGGCTAAGCT
ACCTGCTCAAGTTCTCGGTGCTTTGTCAGGTAGTACTATACTAGTACGTT
GCCGCTCATGAAGCCATCAGCAGGTGCGGCGATGCTTGTGCCGATTGGTC
ACTTTGCCTACGCTAGCGCATATTTAAGCTGTGTATGTAACACGCCACAC
AAGTGTGTAGCGCTCCTGTTCGAGTCTTCATCTCCGCCGGCCAGTGGCGT
CTCTCTGGCCGCTCCCGAGCTGCTGAATGCGTTGACCTATGCGCTTGCCA
AACGAAAGCGACTCTAGTCTTGCACGAAGTGCATGCGATTTCTGGTGGGA
AGCATTATAAGACGGCTCGTTGCAGCTTAGTCGAATAGTGATTGGTCTCC
AGGCGCTTCGGAAATGATGTACCATTAGTACCTCATGTGTCCGTGTTCCA
GAGGGGCATCTGCAGCAATGTGCCTCCTGCTCTGCTAGACGGCGCCATTG
TTGTGAGATTTCACACTGCAAGGTCTGCCACTCTCACATGTGGCTAAATG
GCTACCTCATTTTTTTGTGTATTGCTTTGCTCTCCCCTCGGCTCCCATGC
ACAGGAGCAACATGGCAGGAAGCTTGCACCGAAGGTGGGTCAACTCAGAT
GCATGCTGCGCGCCGCTTCTGCTTCACCTGTGTGCAGATTAAATTGCAGC
AGAAGTACTCGCTCTGACACCTTGTGGATTTGAGCGGCAGCTGCAGCTGT
TGTTGTCCATGTCAGAGCAGCACTCCCATGCATGTACATCTATGTAAGAT
AATTGCATCATTGAAGGGGTCATCAGCCGTATTGTGCGGTGGTGTGTATG
GGGGGCGGGGGGGGGGTGAAAGGGTGTGTGTGTGTGTGTGTGCTGCCCCT
TCATAGACAAAAGTGGTTTGTCTGCCTCTGACAGTTGCTGCTGACGAGGA
AGCATGCAGGGGGCTGGGCAAGCCAGAACTGCTGACGGGGGGGGTTTCCA
TTATGCATGAACTGGAAAACATGCCTGCTACTGCAATCACACTCAGCTAC
TGTTTGTTTACGACACGGTGTGGCGCAGCGTGTTTGACGGGATGCAACCA
AAAAGCGTCACCGCATCCTGTGTAGGAGCGTACGTAACTTCAACCGCACG
TTGAAATACTTCAGGTGACTCACCTCTCCCCCCCCCCCCCGCTTCATTCC
TCCCCTCTGTAACAGCTCTGCCTGAAGGAGTGGAAGGCGTGCAAAGCGGA
CGCCATCTGCAACAACTGTCTGGAGAACGGCAATGTACCTGAGAAGCCCA
AGATTGACAACGCCACCTGCGCGACCGTCGACAAGTGGTGGGACCAGATC
GCCTTCAAGGGCATCGCTGGCTGTGACGACTACGACATTGGCAAGAGCAA
GCTGTCCAAGCTGCTGTACTGCCGTTACGACAGCTACGCTGCTGAGGCCA
AGATCAAGTGTGAACTCGGCAGCATTGCTCCGAGCACCGCCCCGTCCATG
GTCCCCACGACCATGCCCTTCCAGTACGCCACGGACGCGCCCGCGGCGAC
CGTCGGGTGAGTACCATACCTACATGCCCTGGTGCACACTAGATGTACTT
GACAGCATACATTATTATTACAGCTACCCCTCGTGCACTAGTTATGCTTT
GAAGTTTCTACAGATTTTGTTGTATAGAAGCATCCACCTTCATGCACGAG
ATCACTTGACAGGACACACTGTGTTATTTTGTGGCTATGTGAATGTATGG
GCTCAAGTTATCCAGTGCACCACCGACGCACCCACGGCGACTGTCAGGTG
ACTACCCACATGCATGCCCTCATGCACACTGAATGCGCTTGAAATTGAAG
AGTACTTTTTTATGTTGTGGAATAACAGCTACGTCTACACAGTGTTTTCT
GAAAAATGTTTACGTGGGTGAGCGCACACATGCCCTTGTGCACAACATAC
CGCCAAGTAACCCAAACTCAAGTGTATGTATGCACAGCACAGATTCATGT
AGTTACAGTCTTCTGGGTAGACATTATTGTCACTCTACTGAGGGTCAGGG
TTAGGGTTAGGGTTACATGTCCCTGGGTCAGCGATGCGCGCTTCCATTCA
TCCACTGCTCTGAGCAATTCACCGCCTGTGAGAGGTGCGCCGTGTGTGTT
TACGCCTGACGAGCCTGCAGTTGAGAGCATGCGTGTAGCGAAGCGCTGCT
GTCATTCAATTACTGCGCGCGCTACTGTACTCTCAACCCTGCTCTGAGCA
ACAACAACTTACCTACCCCGACTACGTGTCACAACGCTCAACAGGCCAAC
GGTTGAGGGCTCTGCGGGCGGCACGAGTGACTTGTGAATCGCCTCACCGA
CTCTTGTCATCCTATGAATATGCGCATTTCTACTTCAAACTGTAGTCTAT
CCTGCTCTGAGCAACGACCTACCTACCTACCCCTACTATGTCACAACGAT
TAACAGGCCCACAGTTGAGGGCTCTGCGGGCGGCACGCTGGCGGGCACGC
AGGATGTGCCCGTGGACAAGAAGGGCTGCGCGCTGCTGTACGGACAGTGC
GCGGGCGTCGGCTTTGGCGAATACTGCTGCACCGCTGGCTCAGTATGTGA
GTACCTGCAGTATCTACCTATTTACATGTAGGGTTTGTTAGCGTCGGCCT
TGGCGAATACTGTTGCACCGCTGGCCCAGTATGTGAGTGAGTCCCTGCAG
TTTTTATCATGTAGGGATCAGCGCCGGCTTTGGCGAATGCTGCTGCGAGT
TCCTACAGCATGTATGTTATGCCCAATGTAGAGGGCGCGTTGTTGTCGGC
TTTTGTGGATACTGCTGTGAGTACCTGCAGTACCTATTCGCATGTATGTA
GGGGTTGTTAGTTATTCTGGTCGCTGTGATTGTTGAGGCATGTGGCTGGA
CAGCCGCAAATGTGAAGCTGACAGCTCACAGTTTTATAAGTTCAAGTCAC
AGTTCAACTGATATTTTGTTCAAAGGGTTGAGGTTCAAAAAGTATGACAG
GGCCGAGGTGATGCGCTGGGCGCACATGAAGCTTGCACTGTGAACTTCAA
GCAGTTGAGGCAGGGTCACAAGTGGGTTTCGGCAACAGCCTCACTGCTTC
TGAAGTTGAACACATTGTGCAAGCGTGAAGTTGCTGGTGCCACGTTTGTG
TTGTAGAGAGCAGCTTCATCTCCAAAGCTTGGTCTTCAGCAAATTGTGCG
GTGTGGTTGTCAAGTTTTTGTTTTCTTTTGTGGCTCTTGCAGTCGGTGCA
TTGCACTGCATGTGCCGGTGCTTTGCCTAGTTCTTAGTGGGGGGGGGGGG
GGGGGGGGGGGGCACTGCGCTTTTGCCACCGTCTCTGGGTTAGGGTTAAG
GTTAGGGTTAGGGTTAGGGTTAGGGCAGTTGCTGTAGACCGCGTTTGCAC
ACAATCTCATTGTCATAGTCCTCACACGTGACCGCAGTCATGGAGGCTCT
CATGAAGGCTGAACACACCAAGTACTCACCGGCACTGAAATGGGCTGTCG
CTTGTTTGATCACACTGGAAAATGTTGTAAAGGAGGGTGGGAGCCTCAAT
TTCTGTCGTCATGCTACCCTTGAAAGTATATGCATGTAGCCAGAAGTCAT
CACGCACCTACTTCAGTTCACATGTTCAACTTGAAGTGTTCTCAACAGTC
AGCAAACGTGCACTGCAGCATGCCAACAAACTGTGCAGCACTGGTGCTCG
ATGATGCACTGGACTTTCATATGTGCTGAAAACGCCAGTCATTATTAGTG
CAAGGCCCCACACAGTCAAGTCGCCCCTTGATGAACTGTGTGAAAGAGCC
TTTGCTGTCCTTAACACTGACAAAGTTCATTACCCCCCCCTCCCCCCACC
ACCCCACCCCGTGCATGCCGGCTCACCCCCCCCTACCCTCTTCATTGCCC
CCCCACCAGGCATTGCCACTGGCGGCATCTACTACTCCCAGTGCCAGCCC
CCGGTGGCCGCCACCCAGCCCCCGCAGCCGCCTGCCACCAGCGGCGCCAC
CAGCGGCGGCGGCAGCGGCAGCAGCAACAGCGGCACACTCGGCGGCAGCA
GCGCTTCTAGCGGCGCAAACGCAGCCACCCCCGCGCCCCCTGTAGTTTAG
AATCCTTCCGGTAGAGAGAGTTGGAGAGCGCCCTCGCGAGGGGCGGCGGC
TTCGCTGAGTTGAGCGCTGAGACGATAGCGGAGCGTCGCCGCCGCCCATT
TCTGCGGCGGCGCGGCTCATAGTTGAAGTAGAGGCGCGCAACCCACTTCC
ACACGCAAACACACACACACACATGCGCGCTTTCCCCGGCCAGTCGGCCG
TGCGCGCTGCGCTGCCGCCGCTGCCGCTGCTGCAGGGAGCGAGCGCGTGC
TGCTGCCGCGGCGGCGGCCGCGCCAGTCCCGCCCACGTTTACTATCATGA
TCGAAGACGCCTCTCGCACGAGGTTTTTTGTGTTTGCGAGCGAGCCGGCC
GCTTGCGGCATTGCTCAGGACTATCTCCTTTTGGTTATTGGACACACCGT
CGCCACCCCCCCGCTGTCCTATGCGCCCCCCCCCCCCACCCCCTTCTTCG
CACACTTTTGTTTATGAGGTCACGAGTTGCATTGGGCCAATGCCTACAAG
ACGTGTGCATGCTCCAAGCGTGTGCATGTCTCAAGTGCATGCCACCAAAG
TGGCACCCGCGAGCGCGGTGGCAGGTGCAGCACACCCCACGTTACAACCC
GAATTTGTCATAATACACCCACATGTTTAACATA

Coding sequence (CDS) from alignment at Contig_57:672818..677901+

>mRNA_8637 ID=mRNA_8637|Name=jgi.p|Trimin1|350160|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=783bp|location=Sequence derived from alignment at Contig_57:672818..677901+ (Tribonema minus UTEX_B_3156 )
ATGGCGTTCATGCGGTGTTGTGCTGTCCTCGCCCTGGCTGCCGGAGCTGC
GGGTTTCTCGCTGAGGGGGGCGGAACAGCAGGAGCAACATGGCAGGAAGC
TTGCACCGAAGCTCTGCCTGAAGGAGTGGAAGGCGTGCAAAGCGGACGCC
ATCTGCAACAACTGTCTGGAGAACGGCAATGTACCTGAGAAGCCCAAGAT
TGACAACGCCACCTGCGCGACCGTCGACAAGTGGTGGGACCAGATCGCCT
TCAAGGGCATCGCTGGCTGTGACGACTACGACATTGGCAAGAGCAAGCTG
TCCAAGCTGCTGTACTGCCGTTACGACAGCTACGCTGCTGAGGCCAAGAT
CAAGTGTGAACTCGGCAGCATTGCTCCGAGCACCGCCCCGTCCATGGTCC
CCACGACCATGCCCTTCCAGTACGCCACGGACGCGCCCGCGGCGACCGTC
GGGCCCACAGTTGAGGGCTCTGCGGGCGGCACGCTGGCGGGCACGCAGGA
TGTGCCCGTGGACAAGAAGGGCTGCGCGCTGCTGTACGGACAGTGCGCGG
GCGTCGGCTTTGGCGAATACTGCTGCACCGCTGGCTCAGTATGCATTGCC
ACTGGCGGCATCTACTACTCCCAGTGCCAGCCCCCGGTGGCCGCCACCCA
GCCCCCGCAGCCGCCTGCCACCAGCGGCGCCACCAGCGGCGGCGGCAGCG
GCAGCAGCAACAGCGGCACACTCGGCGGCAGCAGCGCTTCTAGCGGCGCA
AACGCAGCCACCCCCGCGCCCCCTGTAGTTTAG