Trimin1|350156|estExt_Genemark1.C_Ctg_570081 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350156
Unique NameTrimin1|350156|estExt_Genemark1.C_Ctg_570081
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length128
Homology
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BLAST of jgi.p|Trimin1|350156 vs. uniprot
Match: A0A835YK52_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK52_9STRA)

HSP 1 Score: 189 bits (479), Expect = 9.330e-60
Identity = 120/127 (94.49%), Postives = 123/127 (96.85%), Query Frame = 0 
Query:    1 MSGSESEGGPAWKRFSSCSGXXXXXXXXXXXXXXXXXXGQESGVAEADAAEGRVVAEWLASTLATVPDSRGMLKRAVALPESCLRTLLLNADEMILERTRAAEREAECEPFDALASATEELEPDARD 127
            MSGSESEGGPAWKRFSSCSG XXXXXXXXXXXXXXXXXGQE GVAEADAAEGRVVAEWLASTLATVPDSRGMLKRA+ALP+SCLRTLLLNADEMILERTRAAEREAE  PFDALA+ATEELEPDARD
Sbjct:    1 MSGSESEGGPAWKRFSSCSGGXXXXXXXXXXXXXXXXXGQEDGVAEADAAEGRVVAEWLASTLATVPDSRGMLKRAIALPDSCLRTLLLNADEMILERTRAAEREAEFGPFDALANATEELEPDARD 127
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350156 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YK52_9STRA9.330e-6094.49Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_57contigContig_57:608631..609369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350156mRNA_8628Tribonema minus UTEX_B_3156 mRNAContig_57 608631..609994 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350156|estExt_Genemark1.C_Ctg_570081 ID=Trimin1|350156|estExt_Genemark1.C_Ctg_570081|Name=jgi.p|Trimin1|350156|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=128bp
MSGSESEGGPAWKRFSSCSGGGGSSGGSASSSRDSSSSGQESGVAEADAA
EGRVVAEWLASTLATVPDSRGMLKRAVALPESCLRTLLLNADEMILERTR
AAEREAECEPFDALASATEELEPDARD*
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