Trimin1|350151|estExt_Genemark1.C_Ctg_570067 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350151
Unique NameTrimin1|350151|estExt_Genemark1.C_Ctg_570067
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length528
Homology
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BLAST of jgi.p|Trimin1|350151 vs. uniprot
Match: A0A836CBF2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBF2_9STRA)

HSP 1 Score: 667 bits (1720), Expect = 1.040e-235
Identity = 527/527 (100.00%), Postives = 527/527 (100.00%), Query Frame = 0 
Query:    1 MEGFAQHYGVRAQTIKDYIGRFQFRRRGALVRGDPPRTFMLWHHPDFVRGCDASQIELRGTYSQSPSAALGGGGYAGMSLGRTRSNGARGGGSYAFAAGGADAMEVQYGSFGGHALVRENSSSGGRGGSGGGDGFVCVKQESQGVALNGAGXXXXXXXXXXXXXXXXXXXXTGIPSENNEVEAFVLEQLAHAVRAQVARSGFRRADAAAKRRAAANGIAAIANIAAQMGERVRAHPVATPDAAAALRALTVSLARQLGQVEAALSAWCALSGGANALVARLQGAVAQGVESGAREEKGAXXXXXXXXXIGRTGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDSGXXXXXXXXXXXXXXXXDGREPNPICSGVSSPRSPHTPGKRPRSDGGSGSGDEGGAAKRAATSPSKTPTPSAVTAVGGGGVGVPAAPRAPPDAATXXXXXXXTASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKAAAAPAVTSRHIEEV 527
            MEGFAQHYGVRAQTIKDYIGRFQFRRRGALVRGDPPRTFMLWHHPDFVRGCDASQIELRGTYSQSPSAALGGGGYAGMSLGRTRSNGARGGGSYAFAAGGADAMEVQYGSFGGHALVRENSSSGGRGGSGGGDGFVCVKQESQGVALNGAGXXXXXXXXXXXXXXXXXXXXTGIPSENNEVEAFVLEQLAHAVRAQVARSGFRRADAAAKRRAAANGIAAIANIAAQMGERVRAHPVATPDAAAALRALTVSLARQLGQVEAALSAWCALSGGANALVARLQGAVAQGVESGAREEKGAXXXXXXXXXIGRTGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDSGXXXXXXXXXXXXXXXXDGREPNPICSGVSSPRSPHTPGKRPRSDGGSGSGDEGGAAKRAATSPSKTPTPSAVTAVGGGGVGVPAAPRAPPDAATXXXXXXXTASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKAAAAPAVTSRHIEEV
Sbjct:    1 MEGFAQHYGVRAQTIKDYIGRFQFRRRGALVRGDPPRTFMLWHHPDFVRGCDASQIELRGTYSQSPSAALGGGGYAGMSLGRTRSNGARGGGSYAFAAGGADAMEVQYGSFGGHALVRENSSSGGRGGSGGGDGFVCVKQESQGVALNGAGXXXXXXXXXXXXXXXXXXXXTGIPSENNEVEAFVLEQLAHAVRAQVARSGFRRADAAAKRRAAANGIAAIANIAAQMGERVRAHPVATPDAAAALRALTVSLARQLGQVEAALSAWCALSGGANALVARLQGAVAQGVESGAREEKGAXXXXXXXXXIGRTGGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDSGXXXXXXXXXXXXXXXXDGREPNPICSGVSSPRSPHTPGKRPRSDGGSGSGDEGGAAKRAATSPSKTPTPSAVTAVGGGGVGVPAAPRAPPDAATXXXXXXXTASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIKAAAAPAVTSRHIEEV 527
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350151 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CBF2_9STRA1.040e-235100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000104Antifreeze protein, type IPRINTSPR00308ANTIFREEZEIcoord: 445..459
score: 70.0
coord: 472..481
score: 78.75
coord: 459..470
score: 50.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 292..429

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_57contigContig_57:490810..494242 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350151mRNA_8615Tribonema minus UTEX_B_3156 mRNAContig_57 490810..494271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350151|estExt_Genemark1.C_Ctg_570067 ID=Trimin1|350151|estExt_Genemark1.C_Ctg_570067|Name=jgi.p|Trimin1|350151|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=528bp
MEGFAQHYGVRAQTIKDYIGRFQFRRRGALVRGDPPRTFMLWHHPDFVRG
CDASQIELRGTYSQSPSAALGGGGYAGMSLGRTRSNGARGGGSYAFAAGG
ADAMEVQYGSFGGHALVRENSSSGGRGGSGGGDGFVCVKQESQGVALNGA
GGGGGGGGSGSSGGCGGSGGSTGIPSENNEVEAFVLEQLAHAVRAQVARS
GFRRADAAAKRRAAANGIAAIANIAAQMGERVRAHPVATPDAAAALRALT
VSLARQLGQVEAALSAWCALSGGANALVARLQGAVAQGVESGAREEKGAG
GGGGGGGGIGRTGGGSGDSGGDSGIGSSGGGSGDGGGDSGIGSSGGGGGG
GDSGGGGGGGDGSSGGSGSGDGREPNPICSGVSSPRSPHTPGKRPRSDGG
SGSGDEGGAAKRAATSPSKTPTPSAVTAVGGGGVGVPAAPRAPPDAATAA
AAAAATASATAAAAASAAAATDAAAAAAATIAAAAIAAAAPAFAAAPVAS
AAPVSAAMPPIKAAAAPAVTSRHIEEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000104Antifreeze_1