Trimin1|350138|estExt_Genemark1.C_Ctg_570037 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350138
Unique NameTrimin1|350138|estExt_Genemark1.C_Ctg_570037
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1058
Homology
BLAST of jgi.p|Trimin1|350138 vs. uniprot
Match: A0A836CC96_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC96_9STRA)

HSP 1 Score: 1483 bits (3838), Expect = 0.000e+0
Identity = 1057/1057 (100.00%), Postives = 1057/1057 (100.00%), Query Frame = 0
Query:    1 MRTGRRKRPAESADGELYLDDLGEVDGEAIRLVYEPLEDDDGYSFALLHKDARVPLPLAERVGEGFASALEQALNGKLEALLKHVRLRKRQLTTAQPALSSDTEPEPQKTAAXXXXXXXXXXXXXXXXXGARAEQRRGSTGSSKSGXXXXXXXAAPLLAAEGARPKAHLKALALLQSRAPAAAGVRRSVARPLPAEWQTFEEETAAVHAKNLKRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEQHYLSVFVHEFLQLVPIMDEAPLRAALVRTSSPKSPTSFDHGAAAAXXXXFDDAAAWCAVAVGAALQGADDAHVRAYARRSXXXXXXXXXXXXXAQDTDAALLGRVRLQLLRSCVADCLGDAAGFAAETAAAGALWDRLAARARMGSQTVSAGDTAAAVRYLLRASQLRADSPSAWAAAVADAAGAAAAHVPPEEWDDARVDALLPPLPAALRALPAALLQPLQRRDARAFVVALQEALAASACSQLRGAAAPPGGDVLVHCVEAVQLALSLLTAAPQAAQCGVLLRTALSGWLGFFKLLVGDEDGALSALRAAVVDFEGLPGAARWPPAAHQLEVTALLLLRRGRAQEYRRLRAVHAAFARGRAPLPPAERCEPRRDACAHPLCRHVLLRAGALPAAAAGFGDHAEPRQLPSPPPQLQQPFLQQLLQMPFPMQSSADAQDGAGYDMDAAAVPWPQHQFHFGGDCSSGGGSSDALQQLLAPGALPPPPHAPLQRDAAAEYAYGARRCSLPAVPFGHAASSCGGIDADGCLSGEWRHSSSHYPGEQLGGTVRRASFEPIGSMDLCGSIEXXXXXXXXXXXXXXXXXXXXXXIGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHFASSARRTSATSXXXDMPQAXXXXXXXXAGSGADDDFAFLAATADIFMGGEGPLDALDVTDAAFEPPSGDAMPLALDPQLFPYLDWG 1057
            MRTGRRKRPAESADGELYLDDLGEVDGEAIRLVYEPLEDDDGYSFALLHKDARVPLPLAERVGEGFASALEQALNGKLEALLKHVRLRKRQLTTAQPALSSDTEPEPQKTAAXXXXXXXXXXXXXXXXXGARAEQRRGSTGSSKSGXXXXXXXAAPLLAAEGARPKAHLKALALLQSRAPAAAGVRRSVARPLPAEWQTFEEETAAVHAKNLKRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEQHYLSVFVHEFLQLVPIMDEAPLRAALVRTSSPKSPTSFDHGAAAAXXXXFDDAAAWCAVAVGAALQGADDAHVRAYARRSXXXXXXXXXXXXXAQDTDAALLGRVRLQLLRSCVADCLGDAAGFAAETAAAGALWDRLAARARMGSQTVSAGDTAAAVRYLLRASQLRADSPSAWAAAVADAAGAAAAHVPPEEWDDARVDALLPPLPAALRALPAALLQPLQRRDARAFVVALQEALAASACSQLRGAAAPPGGDVLVHCVEAVQLALSLLTAAPQAAQCGVLLRTALSGWLGFFKLLVGDEDGALSALRAAVVDFEGLPGAARWPPAAHQLEVTALLLLRRGRAQEYRRLRAVHAAFARGRAPLPPAERCEPRRDACAHPLCRHVLLRAGALPAAAAGFGDHAEPRQLPSPPPQLQQPFLQQLLQMPFPMQSSADAQDGAGYDMDAAAVPWPQHQFHFGGDCSSGGGSSDALQQLLAPGALPPPPHAPLQRDAAAEYAYGARRCSLPAVPFGHAASSCGGIDADGCLSGEWRHSSSHYPGEQLGGTVRRASFEPIGSMDLCGSIEXXXXXXXXXXXXXXXXXXXXXXIGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHFASSARRTSATSXXXDMPQAXXXXXXXXAGSGADDDFAFLAATADIFMGGEGPLDALDVTDAAFEPPSGDAMPLALDPQLFPYLDWG
Sbjct:    1 MRTGRRKRPAESADGELYLDDLGEVDGEAIRLVYEPLEDDDGYSFALLHKDARVPLPLAERVGEGFASALEQALNGKLEALLKHVRLRKRQLTTAQPALSSDTEPEPQKTAAXXXXXXXXXXXXXXXXXGARAEQRRGSTGSSKSGXXXXXXXAAPLLAAEGARPKAHLKALALLQSRAPAAAGVRRSVARPLPAEWQTFEEETAAVHAKNLKRKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAEQHYLSVFVHEFLQLVPIMDEAPLRAALVRTSSPKSPTSFDHGAAAAXXXXFDDAAAWCAVAVGAALQGADDAHVRAYARRSXXXXXXXXXXXXXAQDTDAALLGRVRLQLLRSCVADCLGDAAGFAAETAAAGALWDRLAARARMGSQTVSAGDTAAAVRYLLRASQLRADSPSAWAAAVADAAGAAAAHVPPEEWDDARVDALLPPLPAALRALPAALLQPLQRRDARAFVVALQEALAASACSQLRGAAAPPGGDVLVHCVEAVQLALSLLTAAPQAAQCGVLLRTALSGWLGFFKLLVGDEDGALSALRAAVVDFEGLPGAARWPPAAHQLEVTALLLLRRGRAQEYRRLRAVHAAFARGRAPLPPAERCEPRRDACAHPLCRHVLLRAGALPAAAAGFGDHAEPRQLPSPPPQLQQPFLQQLLQMPFPMQSSADAQDGAGYDMDAAAVPWPQHQFHFGGDCSSGGGSSDALQQLLAPGALPPPPHAPLQRDAAAEYAYGARRCSLPAVPFGHAASSCGGIDADGCLSGEWRHSSSHYPGEQLGGTVRRASFEPIGSMDLCGSIEXXXXXXXXXXXXXXXXXXXXXXIGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEHFASSARRTSATSXXXDMPQAXXXXXXXXAGSGADDDFAFLAATADIFMGGEGPLDALDVTDAAFEPPSGDAMPLALDPQLFPYLDWG 1057          
BLAST of jgi.p|Trimin1|350138 vs. uniprot
Match: A0A835ZE19_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE19_9STRA)

HSP 1 Score: 156 bits (395), Expect = 6.970e-35
Identity = 147/365 (40.27%), Postives = 191/365 (52.33%), Query Frame = 0
Query:  398 WCAVAVGAALQGADDAHVRAYARRSXXXXXXXXXXXXX------------AQDTDAALLGRVRLQLLRSCVADCLGDAAGFAAETAAAGALWDRLAARARMGSQTVSA--------GDTAAAVRYLLRASQL----RADSPSAWAAAVADAAGAAAAHVPPEEWDDARVDALLPPLPAALRALPAALLQPLQRRDARAFVVALQEALAASACSQLRGAAAPPGGDVLVHCVEAVQLALSLLTAAPQAAQCGVLLRTALSGWLGFFKLLVGDEDGALSALRAAVVDFEGLPGAARWPPAAHQLEVTALLLLRRGRAQEYRRLRAVHAAFAR--GRAPLPPAERCEPRRDACAHPLCRHVLLRAGAL 736
            W  +A+GA LQGAD+      A  S  XXXXXXXXXXX             + T +++L  V+  +LR+ V+DCLGD  GF A  A A  LW  L A  R  +   +A        G T  ++ +++R  +L    R  SP+ W        GAAA           R   L     A    LP ALL+PL RRDAR F++AL+E  AA+   +L   AA    +VL H    +  AL+ L A+  A++ G LL + L  WLGF KLL+GD  G L   R  +  +E +PGA RW  AAH+ E  A+ LL RG A EY R+R VHA FA   GR  + PAERC   + +CAH LC+  L RAGAL
Sbjct:  289 WACMALGAMLQGADEQQSCRCADLSAAXXXXXXXXXXXXXXXXXXXXXXXGERTLSSVLQLVQNLVLRAVVSDCLGDMEGFRASGADAVQLWSDLGALIRAPATLATAAEAACDHLGTTLGSLAHVMRRLKLVVSCRPASPADWD-------GAAAVE---------RCHRLAAAGGAQRGGLPQALLEPLLRRDARQFLLALEEGFAATEYQRLTSPAAAAADNVLAHAAAPLLAALTDLRASA-ASRSGALLLSTLLAWLGFIKLLLGDVAGWLIVHRELIALYEAVPGALRWSGAAHRAETVAMALLSRGYAAEYERVRRVHARFAEPCGRPAMAPAERCSIAQHSCAHFLCQAALRRAGAL 636          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350138 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CC96_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZE19_9STRA6.970e-3540.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 972..988
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 957..971
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 813..833
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 940..1004
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_57contigContig_57:231325..235733 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350138mRNA_8586Tribonema minus UTEX_B_3156 mRNAContig_57 231213..235733 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350138|estExt_Genemark1.C_Ctg_570037 ID=Trimin1|350138|estExt_Genemark1.C_Ctg_570037|Name=jgi.p|Trimin1|350138|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1058bp
MRTGRRKRPAESADGELYLDDLGEVDGEAIRLVYEPLEDDDGYSFALLHK
DARVPLPLAERVGEGFASALEQALNGKLEALLKHVRLRKRQLTTAQPALS
SDTEPEPQKTAAAKAAAAAAAALEAAAPAGARAEQRRGSTGSSKSGAAAR
APAAAPLLAAEGARPKAHLKALALLQSRAPAAAGVRRSVARPLPAEWQTF
EEETAAVHAKNLKRKEPPPPPPQRAASAAADATSPLRSPSARRRRSCGPA
QVAGAEAAAAAVAKEEEEEATTLRAVPPSPPLAVLVEEKRLGGKKLRAVQ
RHYHQHHQQQQQQDELVVRQAVAAVEETAAAAAQMAAGAAEQHYLSVFVH
EFLQLVPIMDEAPLRAALVRTSSPKSPTSFDHGAAAAAAASFDDAAAWCA
VAVGAALQGADDAHVRAYARRSAAAAAAAAHGGGGAQDTDAALLGRVRLQ
LLRSCVADCLGDAAGFAAETAAAGALWDRLAARARMGSQTVSAGDTAAAV
RYLLRASQLRADSPSAWAAAVADAAGAAAAHVPPEEWDDARVDALLPPLP
AALRALPAALLQPLQRRDARAFVVALQEALAASACSQLRGAAAPPGGDVL
VHCVEAVQLALSLLTAAPQAAQCGVLLRTALSGWLGFFKLLVGDEDGALS
ALRAAVVDFEGLPGAARWPPAAHQLEVTALLLLRRGRAQEYRRLRAVHAA
FARGRAPLPPAERCEPRRDACAHPLCRHVLLRAGALPAAAAGFGDHAEPR
QLPSPPPQLQQPFLQQLLQMPFPMQSSADAQDGAGYDMDAAAVPWPQHQF
HFGGDCSSGGGSSDALQQLLAPGALPPPPHAPLQRDAAAEYAYGARRCSL
PAVPFGHAASSCGGIDADGCLSGEWRHSSSHYPGEQLGGTVRRASFEPIG
SMDLCGSIEHLGAMERRSSFEPSSNVERCGSIGRCNSIEHLGNAGHRGGS
EHPSSIQHRGSIERRGSAEHFASSARRTSATSSSSDMPQALLPPPPPLAG
SGADDDFAFLAATADIFMGGEGPLDALDVTDAAFEPPSGDAMPLALDPQL
FPYLDWG*
back to top