Trimin1|350131|estExt_Genemark1.C_Ctg_570024 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350131
Unique NameTrimin1|350131|estExt_Genemark1.C_Ctg_570024
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length388
Homology
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: A0A835YP68_9STRA (DUF2431 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP68_9STRA)

HSP 1 Score: 647 bits (1670), Expect = 1.120e-232
Identity = 387/387 (100.00%), Postives = 387/387 (100.00%), Query Frame = 0
Query:    1 MAHVLSPYLSRHTVCGGEVNDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFVHGGAAAGGVATRDAPAYQHELHLVGAPPEDPDAVARAVRSVAGAGNVLAVRLVHTYAPPQQPLFPQHDSGGQAGSGXXXXXXXXXXXXXXXXXXXXAAIANCAYEITYASRTAALSRGAADELRAAVEAQVPALLGGRALRPGKSGRGVSRAVPAHLLGFHG 387
            MAHVLSPYLSRHTVCGGEVNDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFVHGGAAAGGVATRDAPAYQHELHLVGAPPEDPDAVARAVRSVAGAGNVLAVRLVHTYAPPQQPLFPQHDSGGQAGSGXXXXXXXXXXXXXXXXXXXXAAIANCAYEITYASRTAALSRGAADELRAAVEAQVPALLGGRALRPGKSGRGVSRAVPAHLLGFHG
Sbjct:    1 MAHVLSPYLSRHTVCGGEVNDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFVHGGAAAGGVATRDAPAYQHELHLVGAPPEDPDAVARAVRSVAGAGNVLAVRLVHTYAPPQQPLFPQHDSGGQAGSGXXXXXXXXXXXXXXXXXXXXAAIANCAYEITYASRTAALSRGAADELRAAVEAQVPALLGGRALRPGKSGRGVSRAVPAHLLGFHG 387          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: A0A3M6UI79_POCDA (FDX-ACB domain-containing protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UI79_POCDA)

HSP 1 Score: 94.4 bits (233), Expect = 2.910e-17
Identity = 74/208 (35.58%), Postives = 96/208 (46.15%), Query Frame = 0
Query:   20 NDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFVHG 227
            N++L++GDGNFSF+  L S L +                                +A LS+F+   +LH VDAT L         +R FDRVI+NFPH  GK N  ++R LL    AS A    R +G+ CV+L  GQGGT  +    +    SWQ   +AA+AGL L  V  F   D+  Y  A  R   G        L H FVHG
Sbjct:   11 NNVLVVGDGNFSFTVCLASALSKTS-------VKIVATSLDSRAALASNDFALGNIAKLSSFENVEILHEVDATDLCQK----FGSRTFDRVIFNFPHTGGKSNIAKSRDLLERFFASAAHHVERFKGDICVSLCQGQGGTPLDNPRRE-LGNSWQVVYRAAKAGLILNDVYPFKSEDYTSYRSAGFRGQLGKGFHTVNGLTHVFVHG 206          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: A0A8J5XRQ9_DIALT (DUF2431 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XRQ9_DIALT)

HSP 1 Score: 93.2 bits (230), Expect = 4.160e-17
Identity = 100/286 (34.97%), Postives = 122/286 (42.66%), Query Frame = 0
Query:   11 RHTVCGGEVNDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGA-------FSPGAAPLLHTFVHGGAAAG-GVATRDAPAYQHELHL----VGAPPEDPDAVARAVRSVAGAGNVLAVRLVHTYAPP 284
            + T  G  V  +L++GD +FSF+  L  +L    +                           + LA L A     V HGVDATRL +   P    R    +IYNFPHV GK N RRNR LL D L +   + L   G+ CVAL  GQGGTS E    D +  +WQA  QA  A   L     ++     GYA  C R  G A       F  G   L+H F    AAA  GV+  D P Y HEL L    VG+       + R V  V G     AV    TY  P
Sbjct:   26 QRTALGAAVQRVLVVGDADFSFAAGLQRVLAASGRPVELIATGYEPERGLDERFPR----AREHLAFLRASG-ARVEHGVDATRLPERFAPGSACR----IIYNFPHVVGKSNLRRNRDLLRDFLRATT-SVLAPGGDVCVALCEGQGGTSLERAPCD-WAMTWQATVQANRAAHVLVDAVPWAEMAVEGYA-PC-RAKGSAESAFSLSFELGEGALVHIFAPAHAAAERGVSCADGPLYLHELQLARSAVGSSALSAAELLRFVEPVVGRNLARAVHHRETYDHP 298          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: A0A2B4RVJ2_STYPI (Ferredoxin-fold anticodon-binding domain-containing protein 1-like n=4 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RVJ2_STYPI)

HSP 1 Score: 92.4 bits (228), Expect = 1.260e-16
Identity = 73/208 (35.10%), Postives = 96/208 (46.15%), Query Frame = 0
Query:   20 NDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFVHG 227
            + +L++GDGNFSF+  L S L +                              + +  LSAF+   +LH VDAT L         +R+FDRVI+NFPH  GK N  ++R LL    AS A    R  G+ CV+L  GQGGT  +    +    SWQ   +AA+AGL L AV  F   ++  Y  A  R   G        L H FVHG
Sbjct:   11 DSVLVVGDGNFSFTVCLASALSKTS-------VKIVATSFDSRTALASNEFALENIEKLSAFENIEILHEVDATDLRRK----FGSRKFDRVIFNFPHTGGKSNIAKSRDLLERFFASAAHHVERFEGDICVSLCQGQGGTPLDNPRRE-LGNSWQVVCRAAKAGLILNAVYPFKSEEYTAYRSAGFRGQLGKGFHTINGLTHVFVHG 206          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: UPI0009E2B79D (uncharacterized protein LOC110043430 n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E2B79D)

HSP 1 Score: 88.6 bits (218), Expect = 3.010e-15
Identity = 74/208 (35.58%), Postives = 96/208 (46.15%), Query Frame = 0
Query:   20 NDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFVHG 227
            N++L++GDGNFSF+  L S L                                + +  LSAF    +LH VDAT L     P    R FDRVI+NFPH  GK N  ++R LL    AS A   + + G+ CV+L  GQGGT  +    + +  +WQ  +QAA+AGL L AV  F   D+  Y  A  R   G        L H FV G
Sbjct:   11 NNVLVVGDGNFSFTVCLASALSETS-------VKIVATSLDSRAALANNDFAVENIDKLSAFKNVEILHEVDATNLTGNFGP----RIFDRVIFNFPHTGGKSNIGKSRELLERFFASAAHH-VDSNGDICVSLCQGQGGTPLDNPRRE-HGNTWQVVSQAAKAGLILNAVYPFRSVDYTSYRSAGFRGQLGKGFHTINGLTHVFVPG 205          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: UPI001CF27E77 (ferredoxin-fold anticodon-binding domain-containing protein 1-like n=4 Tax=Acropora TaxID=6127 RepID=UPI001CF27E77)

HSP 1 Score: 87.8 bits (216), Expect = 4.180e-15
Identity = 71/207 (34.30%), Postives = 95/207 (45.89%), Query Frame = 0
Query:   21 DILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFVHG 227
            D+LI+GDGNFSF+  L S L                                + +A LS ++   + H VDAT ++        +R FDR+I+NFPH+ GK N  ++R LL    AS  +      GE CV+L  GQGGT  +    +    SWQ   QAA++ L L AV  F+ AD+  Y  A  R   G        L H FVHG
Sbjct:   12 DVLIVGDGNFSFTLCLASALSYSS-------VKIVATSLDSLPQLANNDFAVENIAKLSEYENVEMFHEVDATNISKT----FGSRVFDRIIFNFPHLGGKSNIGKSRKLLELFFASAVKHVEPFEGEICVSLCQGQGGTPMDNPRRE-LGNSWQVVYQAAKSDLILRAVYPFTSADYDCYRSAGFRGQLGKGFHTVNGLTHVFVHG 206          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: A0A8J7NTZ3_ATRSP (FDXA1 protein (Fragment) n=1 Tax=Atractosteus spatula TaxID=7917 RepID=A0A8J7NTZ3_ATRSP)

HSP 1 Score: 87.0 bits (214), Expect = 7.110e-15
Identity = 70/208 (33.65%), Postives = 95/208 (45.67%), Query Frame = 0
Query:   18 EVNDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFV 225
            +  D+L++G+GNFSF+ +LC       + T                       GA+    L       V  GVD TRL + P   L  + FDR+I+NFPH   K   +RNR+LL     S A+  L+  GE  V L  GQGGT A+ + +  +  SWQA   AAEAG  L+ +  F  A + GY    +R     F    A L H F 
Sbjct:    6 DPQDVLLVGEGNFSFAAALCQAAGGSARVTATCYQPEEAVLQQE---------GAEENIQLLRDHGAEVHFGVDTTRLGECPA--LARQLFDRIIFNFPHCGRKAGVKRNRSLLAKFFLSCAQV-LKDSGEVHVTLCNGQGGTPAD-QPMREWHNSWQAVAMAAEAGFILSEIRPFDCAKYRGYRSTGYRSQDKTFHVEGA-LTHVFT 199          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: W5LZN9_LEPOC (Ferredoxin-fold anticodon binding domain containing 1 n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5LZN9_LEPOC)

HSP 1 Score: 84.3 bits (207), Expect = 7.110e-15
Identity = 81/251 (32.27%), Postives = 106/251 (42.23%), Query Frame = 0
Query:   18 EVNDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTFVHGGAAAGGVATRDAPAYQHELHLVGAPPEDPDAVARAVRSVAG 268
            +  D+L+LG+GNFSF+ +LC       + T                       GA+    L       V   VD+TRL + P   L  + FD +I+NFPH   K   +RNR+LL     S A+  L+  GE  V L  GQGGT A+ + +  +  SWQA   AAEAG  L+ +  F  A + GY    +R     F    A L H F           TR  P          APPE   A AR  R   G
Sbjct:   10 DPRDVLLLGEGNFSFAAALCQAGGGSPRVTATCYQAEEAVLQQE---------GAEENIQLLREHGAEVHFAVDSTRLGECPA--LAGQLFDHIIFNFPHCGRKAGVKRNRSLLAKFFLSCAQV-LKDSGEVHVTLCNGQGGTPAD-QPMREWHNSWQAVAMAAEAGFILSEIRPFDGAKYHGYRSTGYRSQDKTFHAEGA-LTHVF-----------TRSLPC---------APPESVQAEARLARGSVG 226          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: A0A7D9H712_PARCT (Ferredoxin-fold anticodon-binding domain-containing 1-like n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9H712_PARCT)

HSP 1 Score: 85.5 bits (210), Expect = 2.410e-14
Identity = 68/209 (32.54%), Postives = 95/209 (45.45%), Query Frame = 0
Query:   22 ILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPG---AAPLLHTFVHG 227
            +L++GDGNFSFS SL        +D                            L  L A++   +LH +DAT+L++  P     R+FDR+I+NFPH  GK N ++ R LL D   S         G+ CV L  GQGGT  +      +  SWQ    AA+AGL L  +  F  +D+  Y    +R   G  + G   A  L+H F+ G
Sbjct:   22 VLVVGDGNFSFSLSLAVF-----RDELGLNTHLALTSFDSKDILTQDEFTRVNLERLQAYENVEILHNIDATKLSEYFP----TRKFDRIIFNFPHTGGKSNIKKCRKLLEDFFISAIEHIESYDGDICVTLCKGQGGTPVD-EPQRSHGNSWQIVNNAAKAGLILHQLHPFLDSDYAHYTSVGYR---GKLAKGFHTAGGLIHIFIPG 217          
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Match: UPI001604327A (ferredoxin-fold anticodon-binding domain-containing protein 1 homolog n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI001604327A)

HSP 1 Score: 84.7 bits (208), Expect = 4.440e-14
Identity = 78/216 (36.11%), Postives = 97/216 (44.91%), Query Frame = 0
Query:    9 LSRHTVCGGEVNDILILGDGNFSFSQSLCSLLRRQHQDTXXXXXXXXXXXXXXXXXXXXXXXGADTLAALSAFDFCTVLHGVDATRLADAPPPPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEACVALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPGYALACHRPHGGAFSPGAAPLLHTF 224
            ++   VC G+V   L+LGDGNFSFS +L   +      T                         D  A        TV+ GVDAT L   P   L+ ++FD +I+NFPHV  K   +RNR LL     S A   L A G   V L  GQGGT A+ +    +  SWQA   AAEAGL L  V  F   D+  YA + +R    AF    A L H F
Sbjct:    1 MNMERVCEGKV---LVLGDGNFSFSVALVQRMATPAHLTATALGGEEEALKQHSEAGNNIQALQDKGA--------TVMFGVDATALTACPR--LQGQKFDHIIFNFPHVGRKAPIKRNRELLRKVFISCAEL-LCAEGHVYVTLCQGQGGTPAD-QPQRAWHNSWQAVAMAAEAGLILGEVVPFCAEDWEVYAPSGYRSRDKAFHTEGA-LTHIF 200          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350131 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YP68_9STRA1.120e-232100.00DUF2431 domain-containing protein n=1 Tax=Tribonem... [more]
A0A3M6UI79_POCDA2.910e-1735.58FDX-ACB domain-containing protein n=1 Tax=Pocillop... [more]
A0A8J5XRQ9_DIALT4.160e-1734.97DUF2431 domain-containing protein n=1 Tax=Diacrone... [more]
A0A2B4RVJ2_STYPI1.260e-1635.10Ferredoxin-fold anticodon-binding domain-containin... [more]
UPI0009E2B79D3.010e-1535.58uncharacterized protein LOC110043430 n=1 Tax=Orbic... [more]
UPI001CF27E774.180e-1534.30ferredoxin-fold anticodon-binding domain-containin... [more]
A0A8J7NTZ3_ATRSP7.110e-1533.65FDXA1 protein (Fragment) n=1 Tax=Atractosteus spat... [more]
W5LZN9_LEPOC7.110e-1532.27Ferredoxin-fold anticodon binding domain containin... [more]
A0A7D9H712_PARCT2.410e-1432.54Ferredoxin-fold anticodon-binding domain-containin... [more]
UPI001604327A4.440e-1436.11ferredoxin-fold anticodon-binding domain-containin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR01944625S rRNA (uridine-N(3))-methyltransferase BMT5-likePFAMPF10354DUF2431coord: 23..202
e-value: 1.7E-29
score: 103.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..310
NoneNo IPR availablePANTHERPTHR11538:SF26FERREDOXIN-FOLD ANTICODON-BINDING DOMAIN-CONTAINING PROTEIN 1coord: 20..202
NoneNo IPR availablePANTHERPTHR11538PHENYLALANYL-TRNA SYNTHETASEcoord: 20..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_57contigContig_57:147899..149528 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350131mRNA_8574Tribonema minus UTEX_B_3156 mRNAContig_57 147889..149528 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350131|estExt_Genemark1.C_Ctg_570024 ID=Trimin1|350131|estExt_Genemark1.C_Ctg_570024|Name=jgi.p|Trimin1|350131|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=388bp
MAHVLSPYLSRHTVCGGEVNDILILGDGNFSFSQSLCSLLRRQHQDTPPP
NVVTTTLDSEEWFSALYGGGGADTLAALSAFDFCTVLHGVDATRLADAPP
PPLRARRFDRVIYNFPHVNGKQNARRNRALLCDTLASVARAALRARGEAC
VALVTGQGGTSAEARTLDGYTQSWQAATQAAEAGLTLAAVELFSVADFPG
YALACHRPHGGAFSPGAAPLLHTFVHGGAAAGGVATRDAPAYQHELHLVG
APPEDPDAVARAVRSVAGAGNVLAVRLVHTYAPPQQPLFPQHDSGGQAGS
GGGGGSARSGGGSSSGGCSGGAAIANCAYEITYASRTAALSRGAADELRA
AVEAQVPALLGGRALRPGKSGRGVSRAVPAHLLGFHG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019446BMT5-like