Trimin1|352153|estExt_Genemark1.C_Ctg_1100043 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|352153
Unique Name	Trimin1\|352153\|estExt_Genemark1.C_Ctg_1100043
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	1750

Homology

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BLAST of jgi.p|Trimin1|352153 vs. uniprot
Match: A0A836CMA2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMA2_9STRA)

HSP 1 Score: 2500 bits (6480), Expect = 0.000e+0
Identity = 1749/1749 (100.00%), Postives = 1749/1749 (100.00%), Query Frame = 0

Query:    1 MQIQSLQQLVDQLLAEQSSNAQQLEQRVAQVTELQAQLDAAAADPADARGAADAATNEQLRQVTKKYKAAAAAKKAADGLNAALQERLDAANRTINELRSDAGPDPAAXXXXXXXXXXXXXXTXXXXXXXETMRTELAAARAXXXXAANXXXXXXXXXXALQAERXXXXXXXXXXXXETANARQDAXXXXXXXXXXXXXXXXXXXXAAAAAQQQAVEVNDLCAEVARLICANEALQSSHDALESQLDEQNAAAAQLQAQLADLGSCERAVVRGSSGGSSSSAQRDAGEVSMLRAALADAAALLAEARGQHAAVVAELEAIQQXXXXXXXXXXXXXXXXXXXXXXXQGWVGRFMGWPPSRKRQRPWPNSQGAEEARAFSLGADQELCERRNARVHAAAEQLQSGRIVVADEGPEASGVPGRDMNPVQAETDADWFTYRKRQDSFDLHAADKAYLKACGMQQEGAEGRCSLDLLVEATTAQLQELHKGAQVRVSDVPQRRSLRGSSLRGSFAASNHASARQSFLVRLDSAEDGDNVSSNPASAASATAXXXXXXXXXXXXXXXXEPVQRRAAQQHIRRATRGCEIHPPPAPAAPDAVCEFQRVAAAVLQGRMARAEQRQPRPTHRHVKSLSVERDAAPLLRQLALHDAADAGGAAAGDARRDALARAPSAXXXXXXXXXXXXXXXXXXXXXXXSLHRRPVSMGAAAIEDLIRETRRRLAPVGRMSAXXXXXXGAEAGVPPLPTASSVERCDSDDARAAEAERAMEARSACTDVVSTRAGERCGAGSGGEGGSSVGRTHVPPAALAGADATXXXXXXXXXXXXXXXVSGVDAERPADADDGSAQAHNTEHDGQEPDTVTRCRGEEADGARSPLAQHRSQGGAHAAAAGSARHGGAAPAAQASAVLAPLPDPLQGVYGGGSVSDADAQRTRPHACGGEAEAEVCCSGGXXXXRAXQTXXXXXXGSDAHPPECTGGSDIAKGHDAVLAAAVAEVLGRPRSDGDEAQAAADGACGDAVMPQCAQDVDAKAEEGGAXXXXXXXXXXXXXXXXXXXXXXTELGELRGASGAGALPTTARQVAVLSSSGILQSSTHDNAVACSPRHEEHGSDPGAAXXXXXXXXXXXXXXXXXXLSGQSAAAPLRNVEGIAKRGSETPNLDASAHLPLPPPLSPKHALQVTPDCTRLSGAAAAGRTADAGTKRAPFSTSPPASPRSAAAEQRCGTPTAAAHIVHFLRPASPAGAAXXXXXXXXVTLAARSGSTSPPASPRSAAAEQRCGTPTAAVQNVRFLRPASPASAARGGTAGAXXXSTTLSSGGSSAAEGSALKSSARTEDCTALASSASGACCDAGQAQSVPQDASSXXXXXXXXXXXXXGSSDGGRRADAVLCPSAAPPTPWTAGASICGGDNAGAEPWLHRCFSHAHYSLGAAPDATALSRSISPEPDGVRSHAAAXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXCSAAVAVEQCHTLNMEAAAGELEAXXXXXXXXXXXXAQQAVRDGEAGVLQPSAPCIDAAERAAEEXXXXXXXXXXXXXXXXXXXXXXXXGAAEAAEPCDMPQAVAPQLKHDASGGSERVLCADSGPLGGGTEAATACELRGPSAEQLPCGAATAQQPLCASHVPASIRGAQPSEAGKAPADAAEXXXXXXXXXXXXXXXXXXXXXXXXXXLVPWPKDVVQYHRGFQRFGRQLGTLDLYMWPGITRHELQELYAAAAAADGADEEHGG 1749
            MQIQSLQQLVDQLLAEQSSNAQQLEQRVAQVTELQAQLDAAAADPADARGAADAATNEQLRQVTKKYKAAAAAKKAADGLNAALQERLDAANRTINELRSDAGPDPAAXXXXXXXXXXXXXXTXXXXXXXETMRTELAAARAXXXXAANXXXXXXXXXXALQAERXXXXXXXXXXXXETANARQDAXXXXXXXXXXXXXXXXXXXXAAAAAQQQAVEVNDLCAEVARLICANEALQSSHDALESQLDEQNAAAAQLQAQLADLGSCERAVVRGSSGGSSSSAQRDAGEVSMLRAALADAAALLAEARGQHAAVVAELEAIQQXXXXXXXXXXXXXXXXXXXXXXXQGWVGRFMGWPPSRKRQRPWPNSQGAEEARAFSLGADQELCERRNARVHAAAEQLQSGRIVVADEGPEASGVPGRDMNPVQAETDADWFTYRKRQDSFDLHAADKAYLKACGMQQEGAEGRCSLDLLVEATTAQLQELHKGAQVRVSDVPQRRSLRGSSLRGSFAASNHASARQSFLVRLDSAEDGDNVSSNPASAASATAXXXXXXXXXXXXXXXXEPVQRRAAQQHIRRATRGCEIHPPPAPAAPDAVCEFQRVAAAVLQGRMARAEQRQPRPTHRHVKSLSVERDAAPLLRQLALHDAADAGGAAAGDARRDALARAPSAXXXXXXXXXXXXXXXXXXXXXXXSLHRRPVSMGAAAIEDLIRETRRRLAPVGRMSAXXXXXXGAEAGVPPLPTASSVERCDSDDARAAEAERAMEARSACTDVVSTRAGERCGAGSGGEGGSSVGRTHVPPAALAGADATXXXXXXXXXXXXXXXVSGVDAERPADADDGSAQAHNTEHDGQEPDTVTRCRGEEADGARSPLAQHRSQGGAHAAAAGSARHGGAAPAAQASAVLAPLPDPLQGVYGGGSVSDADAQRTRPHACGGEAEAEVCCSGGXXXXRAXQTXXXXXXGSDAHPPECTGGSDIAKGHDAVLAAAVAEVLGRPRSDGDEAQAAADGACGDAVMPQCAQDVDAKAEEGGAXXXXXXXXXXXXXXXXXXXXXXTELGELRGASGAGALPTTARQVAVLSSSGILQSSTHDNAVACSPRHEEHGSDPGAAXXXXXXXXXXXXXXXXXXLSGQSAAAPLRNVEGIAKRGSETPNLDASAHLPLPPPLSPKHALQVTPDCTRLSGAAAAGRTADAGTKRAPFSTSPPASPRSAAAEQRCGTPTAAAHIVHFLRPASPAGAAXXXXXXXXVTLAARSGSTSPPASPRSAAAEQRCGTPTAAVQNVRFLRPASPASAARGGTAGAXXXSTTLSSGGSSAAEGSALKSSARTEDCTALASSASGACCDAGQAQSVPQDASSXXXXXXXXXXXXXGSSDGGRRADAVLCPSAAPPTPWTAGASICGGDNAGAEPWLHRCFSHAHYSLGAAPDATALSRSISPEPDGVRSHAAAXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXCSAAVAVEQCHTLNMEAAAGELEAXXXXXXXXXXXXAQQAVRDGEAGVLQPSAPCIDAAERAAEEXXXXXXXXXXXXXXXXXXXXXXXXGAAEAAEPCDMPQAVAPQLKHDASGGSERVLCADSGPLGGGTEAATACELRGPSAEQLPCGAATAQQPLCASHVPASIRGAQPSEAGKAPADAAEXXXXXXXXXXXXXXXXXXXXXXXXXXLVPWPKDVVQYHRGFQRFGRQLGTLDLYMWPGITRHELQELYAAAAAADGADEEHGG
Sbjct:    1 MQIQSLQQLVDQLLAEQSSNAQQLEQRVAQVTELQAQLDAAAADPADARGAADAATNEQLRQVTKKYKAAAAAKKAADGLNAALQERLDAANRTINELRSDAGPDPAAXXXXXXXXXXXXXXTXXXXXXXETMRTELAAARAXXXXAANXXXXXXXXXXALQAERXXXXXXXXXXXXETANARQDAXXXXXXXXXXXXXXXXXXXXAAAAAQQQAVEVNDLCAEVARLICANEALQSSHDALESQLDEQNAAAAQLQAQLADLGSCERAVVRGSSGGSSSSAQRDAGEVSMLRAALADAAALLAEARGQHAAVVAELEAIQQXXXXXXXXXXXXXXXXXXXXXXXQGWVGRFMGWPPSRKRQRPWPNSQGAEEARAFSLGADQELCERRNARVHAAAEQLQSGRIVVADEGPEASGVPGRDMNPVQAETDADWFTYRKRQDSFDLHAADKAYLKACGMQQEGAEGRCSLDLLVEATTAQLQELHKGAQVRVSDVPQRRSLRGSSLRGSFAASNHASARQSFLVRLDSAEDGDNVSSNPASAASATAXXXXXXXXXXXXXXXXEPVQRRAAQQHIRRATRGCEIHPPPAPAAPDAVCEFQRVAAAVLQGRMARAEQRQPRPTHRHVKSLSVERDAAPLLRQLALHDAADAGGAAAGDARRDALARAPSAXXXXXXXXXXXXXXXXXXXXXXXSLHRRPVSMGAAAIEDLIRETRRRLAPVGRMSAXXXXXXGAEAGVPPLPTASSVERCDSDDARAAEAERAMEARSACTDVVSTRAGERCGAGSGGEGGSSVGRTHVPPAALAGADATXXXXXXXXXXXXXXXVSGVDAERPADADDGSAQAHNTEHDGQEPDTVTRCRGEEADGARSPLAQHRSQGGAHAAAAGSARHGGAAPAAQASAVLAPLPDPLQGVYGGGSVSDADAQRTRPHACGGEAEAEVCCSGGXXXXRAXQTXXXXXXGSDAHPPECTGGSDIAKGHDAVLAAAVAEVLGRPRSDGDEAQAAADGACGDAVMPQCAQDVDAKAEEGGAXXXXXXXXXXXXXXXXXXXXXXTELGELRGASGAGALPTTARQVAVLSSSGILQSSTHDNAVACSPRHEEHGSDPGAAXXXXXXXXXXXXXXXXXXLSGQSAAAPLRNVEGIAKRGSETPNLDASAHLPLPPPLSPKHALQVTPDCTRLSGAAAAGRTADAGTKRAPFSTSPPASPRSAAAEQRCGTPTAAAHIVHFLRPASPAGAAXXXXXXXXVTLAARSGSTSPPASPRSAAAEQRCGTPTAAVQNVRFLRPASPASAARGGTAGAXXXSTTLSSGGSSAAEGSALKSSARTEDCTALASSASGACCDAGQAQSVPQDASSXXXXXXXXXXXXXGSSDGGRRADAVLCPSAAPPTPWTAGASICGGDNAGAEPWLHRCFSHAHYSLGAAPDATALSRSISPEPDGVRSHAAAXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXCSAAVAVEQCHTLNMEAAAGELEAXXXXXXXXXXXXAQQAVRDGEAGVLQPSAPCIDAAERAAEEXXXXXXXXXXXXXXXXXXXXXXXXGAAEAAEPCDMPQAVAPQLKHDASGGSERVLCADSGPLGGGTEAATACELRGPSAEQLPCGAATAQQPLCASHVPASIRGAQPSEAGKAPADAAEXXXXXXXXXXXXXXXXXXXXXXXXXXLVPWPKDVVQYHRGFQRFGRQLGTLDLYMWPGITRHELQELYAAAAAADGADEEHGG 1749

[Close]

BLAST of jgi.p|Trimin1|352153 vs. uniprot
Match: A0A836CQD0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQD0_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 8.920e-17
Identity = 74/129 (57.36%), Postives = 85/129 (65.89%), Query Frame = 0

Query:  242 LESQLDEQNAAAAQLQAQLADLGSCER--AVVRGSSGGSSSSAQRDAGEVSMLRAALADAAALLAEARGQHAAVVAELEAIQQXXXXXXXXXXXXXXXXXXXXXXXQ-----GWVGRFMGWPPSRKRQR 363
            L  +L+EQ AAAAQL+AQLA+    +   A +     GS SSAQRDAGE+++LRAAL DA ALLAEAR QH AVVAEL+AIQQ                XXXXXXX      GW GRF+GWPPSRKRQR
Sbjct:  169 LHKELEEQKAAAAQLRAQLAERRHRDHHDAAIHD---GSRSSAQRDAGEIAILRAALGDATALLAEAREQHLAVVAELKAIQQRQQHWQQWIELQVEAEXXXXXXXXXXXXXGWAGRFLGWPPSRKRQR 294

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352153 vs. uniprot

BLAST of jgi.p|Trimin1|352153 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CMA2_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CQD0_9STRA	8.920e-17	57.36	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 130..192
None	No IPR available	COILS	Coil	Coil	coord: 74..101
None	No IPR available	COILS	Coil	Coil	coord: 303..341
None	No IPR available	COILS	Coil	Coil	coord: 14..41
None	No IPR available	COILS	Coil	Coil	coord: 232..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1087..1107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1247..1281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 561..586
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1247..1261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1652..1695
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1556..1599
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 828..891
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..194
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 722..736
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1143..1215
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 830..868
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 673..696
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1666..1680
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1019..1066
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 716..743

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_110	contig	Contig_110:297704..304621 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352153	mRNA_10728	Tribonema minus UTEX_B_3156	mRNA	Contig_110 297704..304621 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|352153|estExt_Genemark1.C_Ctg_1100043 ID=Trimin1|352153|estExt_Genemark1.C_Ctg_1100043|Name=jgi.p|Trimin1|352153|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1750bp
MQIQSLQQLVDQLLAEQSSNAQQLEQRVAQVTELQAQLDAAAADPADARG
AADAATNEQLRQVTKKYKAAAAAKKAADGLNAALQERLDAANRTINELRS
DAGPDPAAAAAAAAAVAAAAEETARAAAAAETMRTELAAARAEAATAANA
QQAAAAARTALQAERRRATAARQEAAQETANARQDAETARSEAAAAVQAR
DAARADAAAAAQQQAVEVNDLCAEVARLICANEALQSSHDALESQLDEQN
AAAAQLQAQLADLGSCERAVVRGSSGGSSSSAQRDAGEVSMLRAALADAA
ALLAEARGQHAAVVAELEAIQQQLQQQQQQRTERVAEEQQQPQQQQGWVG
RFMGWPPSRKRQRPWPNSQGAEEARAFSLGADQELCERRNARVHAAAEQL
QSGRIVVADEGPEASGVPGRDMNPVQAETDADWFTYRKRQDSFDLHAADK
AYLKACGMQQEGAEGRCSLDLLVEATTAQLQELHKGAQVRVSDVPQRRSL
RGSSLRGSFAASNHASARQSFLVRLDSAEDGDNVSSNPASAASATATAAA
TAAPATAAAAAAEPVQRRAAQQHIRRATRGCEIHPPPAPAAPDAVCEFQR
VAAAVLQGRMARAEQRQPRPTHRHVKSLSVERDAAPLLRQLALHDAADAG
GAAAGDARRDALARAPSAAALSGGGAHWGDGGGGGSGGRRESLHRRPVSM
GAAAIEDLIRETRRRLAPVGRMSAAPPPPPGAEAGVPPLPTASSVERCDS
DDARAAEAERAMEARSACTDVVSTRAGERCGAGSGGEGGSSVGRTHVPPA
ALAGADATAAAAAAAAAATAAAAVSGVDAERPADADDGSAQAHNTEHDGQ
EPDTVTRCRGEEADGARSPLAQHRSQGGAHAAAAGSARHGGAAPAAQASA
VLAPLPDPLQGVYGGGSVSDADAQRTRPHACGGEAEAEVCCSGGGGGARA
AQTCSGSGTGSDAHPPECTGGSDIAKGHDAVLAAAVAEVLGRPRSDGDEA
QAAADGACGDAVMPQCAQDVDAKAEEGGAGGASGGNAADAAATPAPPEHP
RTELGELRGASGAGALPTTARQVAVLSSSGILQSSTHDNAVACSPRHEEH
GSDPGAAATAAAATAAAAATAAAVLLSGQSAAAPLRNVEGIAKRGSETPN
LDASAHLPLPPPLSPKHALQVTPDCTRLSGAAAAGRTADAGTKRAPFSTS
PPASPRSAAAEQRCGTPTAAAHIVHFLRPASPAGAAGGGAASATVTLAAR
SGSTSPPASPRSAAAEQRCGTPTAAVQNVRFLRPASPASAARGGTAGAAS
ASTTLSSGGSSAAEGSALKSSARTEDCTALASSASGACCDAGQAQSVPQD
ASSSGSGGGCGCSGSGGSSDGGRRADAVLCPSAAPPTPWTAGASICGGDN
AGAEPWLHRCFSHAHYSLGAAPDATALSRSISPEPDGVRSHAAAAKAGGA
TANDGGAAAAAAAAAAVTEVALDGAAAADESSCSAAVAVEQCHTLNMEAA
AGELEAAAAAAAAAAAASAQQAVRDGEAGVLQPSAPCIDAAERAAEEPCC
SAESAVAAAATDDGEREPPAAGAAEAAEPCDMPQAVAPQLKHDASGGSER
VLCADSGPLGGGTEAATACELRGPSAEQLPCGAATAQQPLCASHVPASIR
GAQPSEAGKAPADAAEEEEASEEIASMESEEQGDDAAASPPPLVPWPKDV
VQYHRGFQRFGRQLGTLDLYMWPGITRHELQELYAAAAAADGADEEHGG*