Trimin1|352146|estExt_Genemark1.C_Ctg_1100033 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|352146
Unique NameTrimin1|352146|estExt_Genemark1.C_Ctg_1100033
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length126
Homology
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BLAST of jgi.p|Trimin1|352146 vs. uniprot
Match: A0A835ZEX8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEX8_9STRA)

HSP 1 Score: 251 bits (640), Expect = 2.280e-84
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 
Query:    1 MKAAGVISIALAAAAPVSGFVAPSSRSWCQQHTAVALRPVLSMKWDGKSEPKKNPLLEQLAADASWDRQNDRVEVWEDKPNPTFDWISAYLPTDEEREAAAAGYDFANPEAWLEKQKAKDSQAQT 125
            MKAAGVISIALAAAAPVSGFVAPSSRSWCQQHTAVALRPVLSMKWDGKSEPKKNPLLEQLAADASWDRQNDRVEVWEDKPNPTFDWISAYLPTDEEREAAAAGYDFANPEAWLEKQKAKDSQAQT
Sbjct:    1 MKAAGVISIALAAAAPVSGFVAPSSRSWCQQHTAVALRPVLSMKWDGKSEPKKNPLLEQLAADASWDRQNDRVEVWEDKPNPTFDWISAYLPTDEEREAAAAGYDFANPEAWLEKQKAKDSQAQT 125
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BLAST of jgi.p|Trimin1|352146 vs. uniprot
Match: A0A836CII1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CII1_9STRA)

HSP 1 Score: 158 bits (399), Expect = 2.470e-42
Identity = 75/103 (72.82%), Postives = 84/103 (81.55%), Query Frame = 0 
Query:   10 ALAAAAPVSGFVAPSSRSWCQQHTAVALRPVLSMKWDGKSEPKKNPLLEQLAADASWDRQNDRVEVWEDKPNPTFDWISAYLPTDEEREAAAAGYDFANPEAW 112
            AL A  P   FVA S   WC+ H++ +  P LSMKWDGKSEPKKNPLLE+L+ADASWDR+NDR EVWED+PNP FDWISAYLPTDEEREAAAAGYDF +PE W
Sbjct:   12 ALLALLPAHAFVATS---WCRAHSSCSRSPALSMKWDGKSEPKKNPLLEKLSADASWDRENDRKEVWEDEPNPNFDWISAYLPTDEEREAAAAGYDFNDPEGW 111
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BLAST of jgi.p|Trimin1|352146 vs. uniprot
Match: A0A6V1PLK3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PLK3_HETAK)

HSP 1 Score: 97.8 bits (242), Expect = 1.790e-23
Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 0 
Query:   38 RPVLSMKWDGKSEPKKNPLLEQLAADASWDRQNDRVEVWEDKPNPTFDWISAYLPTDEEREAAAAGYDFANPEAWLEKQK 117
            R  + MKW G   PK NP  ++L  DASW R ++RV+V+EDKPNPT+ W   Y PT+EE EAAA GYDF NPE WL + K
Sbjct:   40 RSNMVMKWPGDRPPKTNPKRKELLMDASWARADERVDVFEDKPNPTYPWWETYFPTEEEIEAAAQGYDFENPEKWLAENK 119
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352146 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835ZEX8_9STRA2.280e-84100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CII1_9STRA2.470e-4272.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1PLK3_HETAK1.790e-2356.25Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_110contigContig_110:233791..237723 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352146mRNA_10715Tribonema minus UTEX_B_3156 mRNAContig_110 233659..238012 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|352146|estExt_Genemark1.C_Ctg_1100033 ID=Trimin1|352146|estExt_Genemark1.C_Ctg_1100033|Name=jgi.p|Trimin1|352146|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=126bp
MKAAGVISIALAAAAPVSGFVAPSSRSWCQQHTAVALRPVLSMKWDGKSE
PKKNPLLEQLAADASWDRQNDRVEVWEDKPNPTFDWISAYLPTDEEREAA
AAGYDFANPEAWLEKQKAKDSQAQT*
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