Trimin1|350107|estExt_Genemark1.C_Ctg_560025 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350107
Unique NameTrimin1|350107|estExt_Genemark1.C_Ctg_560025
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length507
Homology
BLAST of jgi.p|Trimin1|350107 vs. uniprot
Match: A0A835YXJ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXJ4_9STRA)

HSP 1 Score: 835 bits (2156), Expect = 1.020e-302
Identity = 506/506 (100.00%), Postives = 506/506 (100.00%), Query Frame = 0
Query:    1 MHYFRRPKEALHRRRSYVADRGFQDHYSEGLADGLGVSWPPSGVSRRWHRHANATFVALVIVFVCVCVTDFVLTVRARLSPPVSLSRDPAATQLKMPYFTVCRPLLLIGNDVAGWGDWQGIPYATSVGCLRTVLYGADGVESDDGTVRHRVNCTATHWPITTSKGDGCEVIGIDQAIASGQSXXXXXXXXXXXXXXXXXXXDIDVNKDLRYAVEFITPRAGMDMXXXXXXXXXXXXXXXXQPQDTFNWANYYVTDEAPPDGIDWNTSELRYDFGGVKVGNHYAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPPPPQITEKRDVHSERATITKERDVHLACTRGGLDSAEFTRSHEGXXXXXXXXXXXXXXXXSCTRTTTYSYGAEMTMLSSDEGNTTLVFDFTSDALGLMILAEQDPVDWLNLVSNAYSYLGYCLAAFTLLFGFARTARLRELEEAKTLHILKQHLAAVERQQRMLTECHAPVDTVVDDARHSAVQLV 506
            MHYFRRPKEALHRRRSYVADRGFQDHYSEGLADGLGVSWPPSGVSRRWHRHANATFVALVIVFVCVCVTDFVLTVRARLSPPVSLSRDPAATQLKMPYFTVCRPLLLIGNDVAGWGDWQGIPYATSVGCLRTVLYGADGVESDDGTVRHRVNCTATHWPITTSKGDGCEVIGIDQAIASGQSXXXXXXXXXXXXXXXXXXXDIDVNKDLRYAVEFITPRAGMDMXXXXXXXXXXXXXXXXQPQDTFNWANYYVTDEAPPDGIDWNTSELRYDFGGVKVGNHYAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPPPPQITEKRDVHSERATITKERDVHLACTRGGLDSAEFTRSHEGXXXXXXXXXXXXXXXXSCTRTTTYSYGAEMTMLSSDEGNTTLVFDFTSDALGLMILAEQDPVDWLNLVSNAYSYLGYCLAAFTLLFGFARTARLRELEEAKTLHILKQHLAAVERQQRMLTECHAPVDTVVDDARHSAVQLV
Sbjct:    1 MHYFRRPKEALHRRRSYVADRGFQDHYSEGLADGLGVSWPPSGVSRRWHRHANATFVALVIVFVCVCVTDFVLTVRARLSPPVSLSRDPAATQLKMPYFTVCRPLLLIGNDVAGWGDWQGIPYATSVGCLRTVLYGADGVESDDGTVRHRVNCTATHWPITTSKGDGCEVIGIDQAIASGQSXXXXXXXXXXXXXXXXXXXDIDVNKDLRYAVEFITPRAGMDMXXXXXXXXXXXXXXXXQPQDTFNWANYYVTDEAPPDGIDWNTSELRYDFGGVKVGNHYAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPPPPQITEKRDVHSERATITKERDVHLACTRGGLDSAEFTRSHEGXXXXXXXXXXXXXXXXSCTRTTTYSYGAEMTMLSSDEGNTTLVFDFTSDALGLMILAEQDPVDWLNLVSNAYSYLGYCLAAFTLLFGFARTARLRELEEAKTLHILKQHLAAVERQQRMLTECHAPVDTVVDDARHSAVQLV 506          
BLAST of jgi.p|Trimin1|350107 vs. uniprot
Match: A0A835YRY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRY4_9STRA)

HSP 1 Score: 474 bits (1221), Expect = 1.490e-162
Identity = 273/509 (53.63%), Postives = 305/509 (59.92%), Query Frame = 0
Query:    1 MHYFRRPKEALHRRRSYVADRGFQDHYS--EGLADGLGVSWPPSGVSRRWHRHANATFVALVIVFVCVCVTDFVLTVRARLSPPVSLSRDPAATQLKMPYFTVCRPLLLIGNDVAGWGDWQGIPYATSVGCLRTVLYGADGVESDDGTVRHRVNCTAT--HWPITTSKGDGCEVIGIDQAIASGQSXXXXXXXXXXXXXXXXXXXDIDVNKDLRYAVEFITPRAGMDMXXXXXXXXXXXXXXXXQPQDTFNWANYYVTDEAPPDGIDWNTSELRYDFGGVKVGNHYAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPPPPQITEKRDVHSERATITKERDVHLACTRGGLDSAEFTRSHEGXXXXXXXXXXXXXXXXSCTRTTTYSYGAEMTMLSSDEGNTTLVFDFTSDALGLMILAEQDPVDWLNLVSNAYSYLGYCLAAFTLLFGFARTARLRELEEAKTLHILKQHLAAVERQQRMLTECHAPVDTVVDDARHSAVQL 505
            M Y RRPKE LHRR   + ++ FQD Y   +GLADGL VSWPPSGVSRRWHRHANATFVALVIVFVCVCVTDF LTVRARLSPPVSLSR+ AATQL MP FTVCRPLLL GND A WGDWQGIPY T V C+RT  Y A G  +DDG VRHR+N T       ITT  GD C++I I   I                        DID+NKDLRY ++F T                       +  DT++WA+YYV+D+ P D IDWN +E++YDFG VK+GNHY AK                                                    ITK+RD+HL CT GGL                           SC  TT+ SY AE+TML+++     +VFDFTSDALGLMIL EQDPVDWLNLVSNAYSYLGYCLAAFTLLF  ARTARLRELEEAKTLHILKQHLA V  QQR LTEC+APVDTV  DAR   VQL
Sbjct:    1 MQYIRRPKETLHRRHGSIDNQSFQDQYGNLKGLADGLTVSWPPSGVSRRWHRHANATFVALVIVFVCVCVTDFALTVRARLSPPVSLSRNAAATQLNMPNFTVCRPLLLRGNDEANWGDWQGIPYTTQVRCVRTARYDAGGTPADDGAVRHRINITTAVEQQAITTFTGDRCDIISIKNGI------------------------DIDINKDLRYEIQFDT-----------------------RGNDTYDWASYYVSDKRPWDAIDWNANEVQYDFGAVKMGNHYRAK----------------------------------------------------ITKQRDIHLNCTHGGL---------------------------SCAPTTSDSYSAEVTMLATETKPDIVVFDFTSDALGLMILEEQDPVDWLNLVSNAYSYLGYCLAAFTLLFSCARTARLRELEEAKTLHILKQHLATV--QQRALTECYAPVDTV--DARQD-VQL 378          
BLAST of jgi.p|Trimin1|350107 vs. uniprot
Match: A0A836CBG7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG7_9STRA)

HSP 1 Score: 303 bits (775), Expect = 1.730e-95
Identity = 184/454 (40.53%), Postives = 223/454 (49.12%), Query Frame = 0
Query:   27 YSEGLADGLGVSWPPSGVSRRWHRHANATFVALVIVFVCVCVTDFVLTVRARLSPPVSLSRDPAATQLKMPYFTVCRPLLLIGNDVAGWG-DWQGIPYATSVGCLRTVLYGADGVESDDGTVRHRVNCTATHWPIT----TSKGDGCEVIGIDQAIASGQSXXXXXXXXXXXXXXXXXXXDIDVNKDLRYAVEFITPRAGMDMXXXXXXXXXXXXXXXXQPQDTFNWANYYVTDEAPPDGIDWNTSELRYDFGGVKVGNHYAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPPPPQITEKRDVHSERATITKERDVHLACTRGGLDSAEFTRSHEGXXXXXXXXXXXXXXXXSCTRTTTYSYGAEMTMLSSDEGNTTLVFDFTSDALGLMILAEQDPVDWLNLVSNAYSYLGYCLAAFTLLFGFARTARLRELEEAKTLHILKQHLA 475
            Y EGLADGL VSWPP+GV RRWH  ANA FV+L++  + VC  D   TV AR SP VS SRDP  T ++MP +TVCRPLL   +D  G+G DWQG PYAT V CL T      GV ++ G VRHR  C     PI     T KGD C+VI  +                           +IDV++DLR  V  +                         P DT++W +YYVT++ P  G DW TS+  YDFG VK+GN YA +                                                    IT+ER   L C+ GGL      RS                           SY A  ++++ +    ++VF FTSD LG+ +L EQDPVDWLNL+SN YSY GYCLAAF LLFGFART RLRELEEAKTLHIL+QHLA
Sbjct:   20 YGEGLADGLAVSWPPAGVPRRWHGRANAVFVSLILACIGVCAFDVTKTVLARQSPSVSYSRDPTTTAVRMPCWTVCRPLLKAEDDAGGFGGDWQGYPYATQVTCLMTAFSDDQGVPTEGGNVRHRARCPVE--PIVERMVTPKGDACDVIRFEDG------------------------HEIDVDQDLRLEVTIVPTT----------------------PADTYDWVSYYVTEDMPTGG-DWKTSDQAYDFGAVKLGNQYAVQ----------------------------------------------------ITQERQERLECSWGGLKCRHVARS---------------------------SYSAGTSLITQESDGLSVVFSFTSDPLGVTLLREQDPVDWLNLLSNVYSYFGYCLAAFALLFGFARTTRLRELEEAKTLHILQQHLA 345          
BLAST of jgi.p|Trimin1|350107 vs. uniprot
Match: A0A836CBH3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH3_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.360e-13
Identity = 46/100 (46.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:  336 ATITKERDVHLACTRGGLDSAEFTRSHEGXXXXXXXXXXXXXXXXSCTRTTTYSYGAEMTMLSSDEGNTTLVFDFTSDA-LGLMILAEQDPVDWLNLVSN 434
            AT+TK+RDVHLACTRGGL  A                            + T SY AE+TML+++     +VF+FTS+A LGLMIL E DPV WLNLV+ 
Sbjct:    2 ATVTKQRDVHLACTRGGLSGAP-------------------------PPSVTVSYSAEVTMLATEGNPNAIVFNFTSEAALGLMILMEHDPVHWLNLVTT 76          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350107 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YXJ4_9STRA1.020e-302100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YRY4_9STRA1.490e-16253.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CBG7_9STRA1.730e-9540.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CBH3_9STRA1.360e-1346.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_56contigContig_56:241586..248521 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350107mRNA_14091Tribonema minus UTEX_B_3156 mRNAContig_56 241586..250566 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350107|estExt_Genemark1.C_Ctg_560025 ID=Trimin1|350107|estExt_Genemark1.C_Ctg_560025|Name=jgi.p|Trimin1|350107|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=507bp
MHYFRRPKEALHRRRSYVADRGFQDHYSEGLADGLGVSWPPSGVSRRWHR
HANATFVALVIVFVCVCVTDFVLTVRARLSPPVSLSRDPAATQLKMPYFT
VCRPLLLIGNDVAGWGDWQGIPYATSVGCLRTVLYGADGVESDDGTVRHR
VNCTATHWPITTSKGDGCEVIGIDQAIASGQSYWPITTFKGDGCEAIGIH
QDIDVNKDLRYAVEFITPRAGMDMHIDVNKDLRYAVEFITQPQDTFNWAN
YYVTDEAPPDGIDWNTSELRYDFGGVKVGNHYAAKLRYDFGGVKVGNHYA
AKRKYDFGGVKVGNHYAAQPPPPQITEKRDVHSERATITKERDVHLACTR
GGLDSAEFTRSHEGITKERDVHLACTRGGLSCTRTTTYSYGAEMTMLSSD
EGNTTLVFDFTSDALGLMILAEQDPVDWLNLVSNAYSYLGYCLAAFTLLF
GFARTARLRELEEAKTLHILKQHLAAVERQQRMLTECHAPVDTVVDDARH
SAVQLV*
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