mRNA_7257 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|350050
Unique Name	mRNA_7257
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|350050 vs. uniprot
Match: A0A835YP66_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP66_9STRA)

HSP 1 Score: 1186 bits (3067), Expect = 0.000e+0
Identity = 881/881 (100.00%), Postives = 881/881 (100.00%), Query Frame = 1

Query:    1 MPSEPESFEITEVDDGAAFPLEADGEDCGALQNIPTNSSRIGVSPKVSSAAAVAIKPAALNGTGSRAAATGDGHTAPVKGRSAIASAVLAAAPTNASNSQQGVAAADAVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPNAAAGERQQPGTRQRRERAGINPAFADFHVDISGAAGAEQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPKRRKCLMPDDEVNIQYIPLKPRDPQNEAPALREDTKERRIALVKVAKSRRAFWRARHAFARRFAAHPFLLHTAPPAHCGMWPMLAGQPLDLQRLFHAALQKGGYPALEADRSVPAPPVTSTXXXXXXXXXXXXXXWTGGPVASEAAQGMEPWGARWEAVYETMTKPLRSKAVTVAALDAVAFRRAKLRRVYESTLLAFEERCPQDILVAALAAGERALDPAEAVGFVRCVCGHSHQSPLPTVDAECKGCEGSGGGAAASPAGVLRRTRTDMIQCDVCAAWQHSYHMSDVGLLRVQDISDKVSLEQESHFCELCSGIYDDGFEAFYKKHAPFERRPAVSMLPKMLKFELPDAWALESLYRKDEGIKTKLDMAIYRGFLNICISRKKMIRSITALAHFVTGDGTPRPIVADRDDIPVTADVTAGIDPDTNLPHMVIPRGPVPVLRGAADAVDAGGDTAAGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXMVDDDADQAIDEVDEEETEAQDVKDTIPGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARPAAFPITPAGRRC 2643
            MPSEPESFEITEVDDGAAFPLEADGEDCGALQNIPTNSSRIGVSPKVSSAAAVAIKPAALNGTGSRAAATGDGHTAPVKGRSAIASAVLAAAPTNASNSQQGVAAADAVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPNAAAGERQQPGTRQRRERAGINPAFADFHVDISGAAGAEQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPKRRKCLMPDDEVNIQYIPLKPRDPQNEAPALREDTKERRIALVKVAKSRRAFWRARHAFARRFAAHPFLLHTAPPAHCGMWPMLAGQPLDLQRLFHAALQKGGYPALEADRSVPAPPVTSTXXXXXXXXXXXXXXWTGGPVASEAAQGMEPWGARWEAVYETMTKPLRSKAVTVAALDAVAFRRAKLRRVYESTLLAFEERCPQDILVAALAAGERALDPAEAVGFVRCVCGHSHQSPLPTVDAECKGCEGSGGGAAASPAGVLRRTRTDMIQCDVCAAWQHSYHMSDVGLLRVQDISDKVSLEQESHFCELCSGIYDDGFEAFYKKHAPFERRPAVSMLPKMLKFELPDAWALESLYRKDEGIKTKLDMAIYRGFLNICISRKKMIRSITALAHFVTGDGTPRPIVADRDDIPVTADVTAGIDPDTNLPHMVIPRGPVPVLRGAADAVDAGGDTAAGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXMVDDDADQAIDEVDEEETEAQDVKDTIPGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARPAAFPITPAGRRC
Sbjct:    1 MPSEPESFEITEVDDGAAFPLEADGEDCGALQNIPTNSSRIGVSPKVSSAAAVAIKPAALNGTGSRAAATGDGHTAPVKGRSAIASAVLAAAPTNASNSQQGVAAADAVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPNAAAGERQQPGTRQRRERAGINPAFADFHVDISGAAGAEQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPKRRKCLMPDDEVNIQYIPLKPRDPQNEAPALREDTKERRIALVKVAKSRRAFWRARHAFARRFAAHPFLLHTAPPAHCGMWPMLAGQPLDLQRLFHAALQKGGYPALEADRSVPAPPVTSTXXXXXXXXXXXXXXWTGGPVASEAAQGMEPWGARWEAVYETMTKPLRSKAVTVAALDAVAFRRAKLRRVYESTLLAFEERCPQDILVAALAAGERALDPAEAVGFVRCVCGHSHQSPLPTVDAECKGCEGSGGGAAASPAGVLRRTRTDMIQCDVCAAWQHSYHMSDVGLLRVQDISDKVSLEQESHFCELCSGIYDDGFEAFYKKHAPFERRPAVSMLPKMLKFELPDAWALESLYRKDEGIKTKLDMAIYRGFLNICISRKKMIRSITALAHFVTGDGTPRPIVADRDDIPVTADVTAGIDPDTNLPHMVIPRGPVPVLRGAADAVDAGGDTAAGRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXXXXXXMVDDDADQAIDEVDEEETEAQDVKDTIPGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARPAAFPITPAGRRC 881

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350050 vs. uniprot

BLAST of jgi.p|Trimin1|350050 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835YP66_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_55	contig	Contig_55:164368..170008 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|350050\|estExt_Genemark1.C_Ctg_550025
Hectar predicted targeting category	other localisation
TranscriptId	350372
Track	FilteredModels1
ProteinId	350050

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350050	gene_7257	Tribonema minus UTEX_B_3156	gene	Contig_55 164368..170008 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350050	Trimin1\|350050\|estExt_Genemark1.C_Ctg_550025	Tribonema minus UTEX_B_3156	polypeptide	Contig_55 164368..170008 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_7257_8	exon_7257_8	Tribonema minus UTEX_B_3156	exon	Contig_55 164368..164408 -
exon_7257_7	exon_7257_7	Tribonema minus UTEX_B_3156	exon	Contig_55 164508..164663 -
exon_7257_6	exon_7257_6	Tribonema minus UTEX_B_3156	exon	Contig_55 164704..165305 -
exon_7257_5	exon_7257_5	Tribonema minus UTEX_B_3156	exon	Contig_55 165461..165702 -
exon_7257_4	exon_7257_4	Tribonema minus UTEX_B_3156	exon	Contig_55 166385..166595 -
exon_7257_3	exon_7257_3	Tribonema minus UTEX_B_3156	exon	Contig_55 167076..167233 -
exon_7257_2	exon_7257_2	Tribonema minus UTEX_B_3156	exon	Contig_55 168022..168481 -
exon_7257_1	exon_7257_1	Tribonema minus UTEX_B_3156	exon	Contig_55 169233..170008 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_7257	CDS_7257	Tribonema minus UTEX_B_3156	CDS	Contig_55 169233..170008 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_55:164368..170008-
coding sequence from alignment at Contig_55:164368..170008-

spliced messenger RNA

>mRNA_7257 ID=mRNA_7257|Name=jgi.p|Trimin1|350050|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2646bp|location=Sequence derived from alignment at Contig_55:164368..170008- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCCTCCGAACCTGAGAGTTTCGAAATCACTGAGGTCGACGACGGCGC
TGCATTCCCTCTGGAGGCTGACGGCGAGGACTGCGGCGCCCTACAAAACA
TCCCCACGAATTCAAGCAGGATAGGCGTGTCGCCCAAGGTATCGTCTGCA
GCTGCTGTTGCTATCAAACCTGCTGCTCTGAACGGCACCGGCAGCCGTGC
GGCCGCAACCGGCGATGGCCACACCGCGCCAGTCAAGGGGCGATCCGCTA
TTGCCTCTGCCGTCCTGGCTGCCGCTCCCACAAATGCTAGCAACAGTCAG
CAGGGCGTCGCAGCGGCTGATGCTGTGGGCGCGCAACAGGCGCCGCCGCA
GTCGCTTCCGCCACGGCCGCAGCAGCCGCCCCCGCAGCAGCAGCAGCAGC
AGCTGCGGCAGCCGCAGCTGCCGCCGCTGTCGCTGGTGCTCCCTGCCGCA
GCCAACAAGCGCAGGAGGTCCTCGCCGCCGCCGCCGCCGCTGCCCAACGC
GGCCGCCGGCGAGCGACAGCAACCGGGCACGCGGCAGCGGCGCGAGCGCG
CGGGCATCAACCCCGCGTTTGCCGACTTCCACGTGGACATTAGTGGGGCA
GCGGGTGCGGAGCAGCCGCCCAGTCCGCCTTGTCCGCCGGCGGGCAGGGC
GTACAGTGGCGGCGGGGGAGGCGGTGGTGGCGGCGGCGGCAAGGGCGGGA
AGGGCCAGCCGAAGCGGCGCAAGTGCCTCATGCCGGACGACGAAGTCAAC
ATCCAGTACATACCGCTGAAGCCCAGGGACCCGCAGAACGAGGCGCCCGC
GCTGCGCGAGGACACCAAGGAGCGCCGCATCGCGCTCGTCAAGGTCGCCA
AGAGCCGCCGCGCGTTCTGGCGCGCGCGCCACGCCTTCGCGCGCCGCTTC
GCCGCGCACCCGTTCCTCCTGCACACCGCGCCGCCCGCGCACTGCGGCAT
GTGGCCGATGCTCGCGGGGCAGCCGTTAGACCTGCAGCGCCTGTTCCACG
CGGCGCTGCAGAAGGGCGGCTACCCGGCGCTCGAGGCGGACCGGAGCGTC
CCCGCGCCGCCCGTAACTTCAACTTCAAGTTCAAGTTCTCCGCGCGGGGG
CGAGGGGGGCGGGGGGTGGACGGGGGGGCCCGTGGCGAGCGAGGCGGCGC
AGGGGATGGAGCCGTGGGGGGCGCGGTGGGAGGCGGTGTACGAGACGATG
ACCAAGCCGCTGCGCAGCAAGGCGGTCACGGTGGCGGCGCTGGACGCGGT
CGCGTTCCGGCGCGCCAAGCTGCGGCGCGTCTACGAGTCCACGCTGCTGG
CCTTTGAGGAGCGCTGCCCCCAGGACATACTCGTTGCGGCGCTGGCGGCG
GGCGAGCGCGCGCTGGACCCCGCGGAGGCGGTCGGGTTTGTGAGGTGCGT
GTGCGGCCACAGCCACCAGTCGCCGCTGCCCACGGTCGACGCGGAGTGCA
AGGGGTGCGAGGGGTCGGGCGGCGGCGCGGCGGCGTCGCCCGCGGGTGTC
CTGCGGCGCACGCGCACGGACATGATCCAGTGCGACGTCTGCGCCGCGTG
GCAGCATTCGTACCACATGAGCGATGTGGGGCTGCTGAGGGTGCAGGACA
TCTCGGACAAGGTCTCCCTCGAACAGGAGAGCCACTTCTGCGAGCTCTGC
AGCGGCATCTACGATGACGGCTTCGAGGCGTTCTACAAGAAGCACGCGCC
GTTTGAGCGCCGCCCCGCTGTCAGCATGCTGCCCAAGATGTTGAAGTTTG
AGCTGCCCGATGCGTGGGCGCTGGAGAGTCTCTACCGCAAGGACGAGGGC
ATCAAGACGAAGCTCGACATGGCCATCTACAGAGGGTTTCTCAACATCTG
CATCAGCCGTAAGAAGATGATCCGCTCCATCACCGCGCTCGCGCACTTTG
TCACGGGCGACGGCACGCCTCGCCCCATCGTCGCTGACCGCGACGACATC
CCCGTAACCGCCGACGTAACCGCCGGCATCGACCCCGACACCAACCTGCC
ACACATGGTCATACCGCGCGGCCCCGTGCCCGTGCTGCGCGGCGCCGCCG
ACGCAGTCGACGCCGGCGGCGACACCGCCGCTGGCAGGCGCGCGCGCGCT
GCGGCGCTCGCCGCCGCCGGCAGCAGCCGCAACCTGGACGTCGCGGCGGC
GCCGCCGCCCAAAAAGCAGCGCGCCGCGCCGGTGCAGAAGCGGCGCGGCA
GCGGCGGCGGCCGCAGCAGCGTTGGCAGCGGCGGCGGCGGCAGCAGCGGC
GGCAGCGGCGGCGGCGGCAGCGACGGCGGCGGCGCCATGGTCGACGATGA
TGCTGATCAAGCCATAGATGAGGTGGATGAGGAGGAGACGGAGGCGCAGG
ACGTCAAGGACACAATTCCCGGCGGTCGCGGCGGTGGCAGCGGCGGCGGC
CGTGGCAGCGGCAGCGGTGGCAGCGGCGCCGGCAGCAGCAGTGGCCGCAC
AGCAGCGGCGGCGGCGGCAGCAGTGGCGGCGGCGGCGGCAGCAGCGGCGG
CGGCGGCGGCGGCAGCGCTGCGGCTGCAGATGCGGCTGCAGCTGCGGCTG
CGGCTGCGGCTGCTGCCGCCGCAGCGGCAGCAGCAGCGGCAGCACCAGGC
GCGGCCAGCAGCGTTCCCCATCACGCCCGCTGGCCGCCGCTGCTAG

protein sequence of jgi.p|Trimin1|350050

>Trimin1|350050|estExt_Genemark1.C_Ctg_550025 ID=Trimin1|350050|estExt_Genemark1.C_Ctg_550025|Name=jgi.p|Trimin1|350050|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=882bp
MPSEPESFEITEVDDGAAFPLEADGEDCGALQNIPTNSSRIGVSPKVSSA
AAVAIKPAALNGTGSRAAATGDGHTAPVKGRSAIASAVLAAAPTNASNSQ
QGVAAADAVGAQQAPPQSLPPRPQQPPPQQQQQQLRQPQLPPLSLVLPAA
ANKRRRSSPPPPPLPNAAAGERQQPGTRQRRERAGINPAFADFHVDISGA
AGAEQPPSPPCPPAGRAYSGGGGGGGGGGGKGGKGQPKRRKCLMPDDEVN
IQYIPLKPRDPQNEAPALREDTKERRIALVKVAKSRRAFWRARHAFARRF
AAHPFLLHTAPPAHCGMWPMLAGQPLDLQRLFHAALQKGGYPALEADRSV
PAPPVTSTSSSSSPRGGEGGGGWTGGPVASEAAQGMEPWGARWEAVYETM
TKPLRSKAVTVAALDAVAFRRAKLRRVYESTLLAFEERCPQDILVAALAA
GERALDPAEAVGFVRCVCGHSHQSPLPTVDAECKGCEGSGGGAAASPAGV
LRRTRTDMIQCDVCAAWQHSYHMSDVGLLRVQDISDKVSLEQESHFCELC
SGIYDDGFEAFYKKHAPFERRPAVSMLPKMLKFELPDAWALESLYRKDEG
IKTKLDMAIYRGFLNICISRKKMIRSITALAHFVTGDGTPRPIVADRDDI
PVTADVTAGIDPDTNLPHMVIPRGPVPVLRGAADAVDAGGDTAAGRRARA
AALAAAGSSRNLDVAAAPPPKKQRAAPVQKRRGSGGGRSSVGSGGGGSSG
GSGGGGSDGGGAMVDDDADQAIDEVDEEETEAQDVKDTIPGGRGGGSGGG
RGSGSGGSGAGSSSGRTAAAAAAAVAAAAAAAAAAAAAALRLQMRLQLRL
RLRLLPPQRQQQRQHQARPAAFPITPAGRRC*

mRNA from alignment at Contig_55:164368..170008-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_7257 ID=mRNA_7257|Name=jgi.p|Trimin1|350050|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5641bp|location=Sequence derived from alignment at Contig_55:164368..170008- (Tribonema minus UTEX_B_3156 )
ATGCCCTCCGAACCTGAGAGTTTCGAAATCACTGAGGTCGACGACGGCGC
TGCATTCCCTCTGGAGGCTGACGGCGAGGACTGCGGCGCCCTACAAAACA
TCCCCACGAATTCAAGCAGGATAGGCGTGTCGCCCAAGGTATCGTCTGCA
GCTGCTGTTGCTATCAAACCTGCTGCTCTGAACGGCACCGGCAGCCGTGC
GGCCGCAACCGGCGATGGCCACACCGCGCCAGTCAAGGGGCGATCCGCTA
TTGCCTCTGCCGTCCTGGCTGCCGCTCCCACAAATGCTAGCAACAGTCAG
CAGGGCGTCGCAGCGGCTGATGCTGTGGGCGCGCAACAGGCGCCGCCGCA
GTCGCTTCCGCCACGGCCGCAGCAGCCGCCCCCGCAGCAGCAGCAGCAGC
AGCTGCGGCAGCCGCAGCTGCCGCCGCTGTCGCTGGTGCTCCCTGCCGCA
GCCAACAAGCGCAGGAGGTCCTCGCCGCCGCCGCCGCCGCTGCCCAACGC
GGCCGCCGGCGAGCGACAGCAACCGGGCACGCGGCAGCGGCGCGAGCGCG
CGGGCATCAACCCCGCGTTTGCCGACTTCCACGTGGACATTAGTGGGGCA
GCGGGTGCGGAGCAGCCGCCCAGTCCGCCTTGTCCGCCGGCGGGCAGGGC
GTACAGTGGCGGCGGGGGAGGCGGTGGTGGCGGCGGCGGCAAGGGCGGGA
AGGGCCAGCCGAAGCGGCGCAAGTGCCTCATGCCGGACGACGAAGTCAAC
ATCCAGTACATACCGCTGAAGCCCAGGTGAGCGTCGCTCCGCAGTTGTGC
GCAGCCGCGGCTGCTGAGCAGCAACTGATGTTCGCAGGCGGATCATGCAG
CTGTTAGGAAGCAGGCATTGCAACTAGTTTGAAGCGCACTGATAGTCTAG
TCCACCAGTTGCAAGCCATCACTCATGGCAACTGAGCAGCGCTGAGCATC
CAAAGCGGTGCATCTGACCTGTGTGAAGTGACGCAGCTGCCAGTAGTCCG
ACATCTGCCGAAGACTTTGAAGATGCTGGCTGCGTTTGTAGCTTTTCATA
GGCTCCAGAAGCGACACTTTAAAATAGTAATCAACGAGCCAAGACCGGCA
TGCAACAGTGCATCGAGCCACTGCTCAACCTGTCCCTCGCTGTTGTATAG
GCTTTTTTGTACAATCTTTTTTGCGCAAACTTTTCGAAGCATCCAATGTC
TGCAAGTGCGCAGATGCAAGCTTGGACATGCTTGCGTTGACGCATTGAAC
TTGCACGAGTCGCTCGCAGTCCGCAGCGTCATTTACAAACGCGAGCTACG
TTTTACGGCGGGCCTGATGCGCTGTTACAGCACACGGCGCCATCACCGTC
TTCCCACCGTCGCTTCGCAAGGCAGCCGGGTGTGCGCCTTGTGGCGCTTG
CCACGGCCGCCGCCGCCACCTACCGTACGCGCGCACGCGCCAGCTCCTGT
GCGCGCTACACAGCGTCGAGGCAGCACTCCAACCCTAGCGAACACTCTCT
CCCGTGTGCTCGCCCCGCGCGCGCCAGGGACCCGCAGAACGAGGCGCCCG
CGCTGCGCGAGGACACCAAGGAGCGCCGCATCGCGCTCGTCAAGGTCGCC
AAGAGCCGCCGCGCGTTCTGGCGCGCGCGCCACGCCTTCGCGCGCCGCTT
CGCCGCGCACCCGTTCCTCCTGCACACCGCGCCGCCCGCGCACTGCGGCA
TGTGGCCGATGCTCGCGGGGCAGCCGTTAGACCTGCAGCGCCTGTTCCAC
GCGGCGCTGCAGAAGGGCGGCTACCCGGCGCTCGAGGCGGACCGGAGCGT
CCCCGCGCCGCCCGTAACTTCAACTTCAAGTTCAAGTTCTCCGCGCGGGG
GCGAGGGGGGCGGGGGGTGGACGGGGGGGCCCGTGGCGAGCGAGGCGGCG
CAGGGGATGGAGCCGTGGGGGGCGCGGTGGGAGGCGGTGTACGAGACGAT
GACCAAGCCGCTGCGCAGCAAGGCGGTCACGGTGGCGGTGAGCAACGCGG
CAGCGCTCTGCGCACGTGTATGGCGTGTTTGGCGCGGTGTGCCGGGGGAT
TACTGTGTGCGTTTGCGTGCAGGGAAAGATGAGCGAATTCATGCCATATG
CTTTTTGCCCTCGGAGTACACGGCAGAGCGTGCGCCGTGCAGCATTAAAC
ATCCTGATGGTTCCCATTGCCAGAGACCGGTATGTATGCTTCTTTCTGAG
TCTACGTGCGCGTGCGAGCCATGCCGTGCGAAGACACAGCTGACCGGTTG
TCGCGCCCGCACTGAGCACCTTGTGCTGCGGTATCCTGTTCTGCAAGAGT
GCGCGCTCGCATTGCGCAACGGCACCGCGCCAGCAGAGTTGCGCCAGCAC
AACACAGCGATGGAGCCTGTTCTGCGCATGTGTGCCGTGCGGTGAGGCCA
TGACGCAGCGCGCTCGCTGAGCACTGTCGCAGCGTCGGCGCGCGGATGCA
GCAGGGGGTACATATAGTGTCGGGGCATCTGTGTGAGCGCTCGGTGACTT
TGTGCAATGACAGCAGGGCAGTGCTCTACGTACTCTGTGCTGTCCATCGG
TGGAGCCTGCTGCGACGGTGCGCGAGCCGCAGACTTGCATCGCAAGGGTC
TAGGGTTCGGGTTACGGTGTAGGTCACGGCGGCGGTCATGTTACTGGCGC
CTCAGGCAGCGTTGTTCGGTATCCCAAGCGAGGCCGCCCTTTGCTGACGC
GGTGATCGCGACGCGCCTCACGACTCATGCGCGTTATGACTCATGACTTG
ACTCATGTCTCGCACACGGCTACAGGCGCTGGACGCGGTCGCGTTCCGGC
GCGCCAAGCTGCGGCGCGTCTACGAGTCCACGCTGCTGGCCTTTGAGGAG
CGCTGCCCCCAGGACATACTCGTTGCGGCGCTGGCGGCGGGCGAGCGCGC
GCTGGACCCCGCGGAGGCGGTCGGGTTTGTGAGGTGCGCTTGCGGAGCGT
CACATGTTGAGCATCGCTGTAGCTGATCAGCGACAGTACGGGCATGCGCA
GCGCCTTGGGTTGAAGTTGGAGCGACTCGCGCGCAGCAGTGCGGCTGTGC
ATATGTAGCGCGGTCACAGGTGGCGTTGAAGCTTCACAGCTGCACAATGC
GCACTTGTCTGCAGTCAGCCAATGTGTAGAGTGGTTGCAGCCATGGCGAA
TGACTCACAACCCCGTCCTGAGTCAGCCTCTTCGGTTCGAAAGCGACGCT
CAGCAGCGGCGCCACAAAATGCACTCCTGTGACATACCGCTTGTCACTAC
GAGCACACAATGGCGTCTACCTGTACTTATTGCGCCGCGCCGCAACCGCG
CGCGGCCACGACATACGCTGCGCAACACACTCCTTTCACGTACCGCTCGC
CACCGCAAACACATCGCAACACTCACCCGCGTTCTCCGCGCCGCGCCGCC
ACCGCGCGCACAGGTGCGTGTGCGGCCACAGCCACCAGTCGCCGCTGCCC
ACGGTCGACGCGGAGTGCAAGGGGTGCGAGGGGTCGGGCGGCGGCGCGGC
GGCGTCGCCCGCGGGTGTCCTGCGGCGCACGCGCACGGACATGATCCAGT
GCGACGTCTGCGCCGCGTGGCAGCATTCGTACCACATGAGCGATGTGGGG
CTGCTGAGGGTGCAGGACATCTCGGTGAGAGGGGCCGCGGCACTTGAAGT
TGAAGTTGTGCACGCGCTTGTGTCGCTGTTGCGGTGTGGAGTGGTGGGCG
TTGTGGGCGGCGGCGGCGGCTTTGTGGGGCGCGGAGGCGGAGACTGCGGG
TTAAAGTTATGGCTGGGCGCTAGCACGGATCGGTTGTTGTTTGATAGAGG
TCCTCAAAGGCCTGTGTGCATGCCGGAAGTTCAAGCGGATTGCCACTAGA
TACCTCAGCATCAAGTTTTGAGGTAGGTCGGGCGACCACTGCCAGACGGA
ACGCTGTCACTAGTCGAGCTGTTAGAGCGTTCAGGACAAGCAGAGTTGCG
GACGCATACAGGCCTGTTTACAAGGGCATTGCTGTGTGAGACGAGCGCGT
TTTACTCGCTGGCCATGTATCGCTATGTTCATTCACAGAGCACCGTGCCT
CTACCAGAATGGCCCCAACTCCTCTCTCCTGATCTGCCACTGCCGCTCAT
GAGTCTCCTCTCTTCTTTCTGGGTAGAGTGTCACGTTTGCAAGTGCTACA
GTTCATCGCGAGAACGTCGTGCCCTCAAGACTGAAGTTGCCACATGGCAG
CTGCACAAACATCTGCCACCGCAACAAGTCAGCCTTCACCTCACGCACTG
TCGTCGGCTGCCAGTCTCACAGCTCTCATCTCTCTCCCACTCTGCCGTGC
TCACAGGACAAGGTCTCCCTCGAACAGGAGAGCCACTTCTGCGAGCTCTG
CAGCGGCATCTACGATGACGGCTTCGAGGCGTTCTACAAGAAGCACGCGC
CGTTTGAGCGCCGCCCCGCTGTCAGCATGCTGCCCAAGATGTTGAAGTTT
GAGCTGCCCGATGCGTGGGCGCTGGAGAGTCTCTACCGCAAGGACGAGGG
CATCAAGACGAAGCTCGACATGGCCATCTACAGAGGGTTTCTCAACATGT
GAGTGCATTGCGCTTCGAGGTTACGACGCAGTCACGCAGCGACGGTGCGA
CTTCTTGCATCGCAAGTGTCAAGGCGTCAAAGACGAAACACGCGAAGACT
ATGTCGTTCACGCTGCTGCACGCCCCGCCCCCCCCGTGTGCGCGCGTGCG
CAGCTGCATCAGCCGTAAGAAGATGATCCGCTCCATCACCGCGCTCGCGC
ACTTTGTCACGGGCGACGGCACGCCTCGCCCCATCGTCGCTGACCGCGAC
GACATCCCCGTAACCGCCGACGTAACCGCCGGCATCGACCCCGACACCAA
CCTGCCACACATGGTCATACCGCGCGGCCCCGTGCCCGTGCTGCGCGGCG
CCGCCGACGCAGTCGACGCCGGCGGCGACACCGCCGCTGGCAGGCGCGCG
CGCGCTGCGGCGCTCGCCGCCGCCGGCAGCAGCCGCAACCTGGACGTCGC
GGCGGCGCCGCCGCCCAAAAAGCAGCGCGCCGCGCCGGTGCAGAAGCGGC
GCGGCAGCGGCGGCGGCCGCAGCAGCGTTGGCAGCGGCGGCGGCGGCAGC
AGCGGCGGCAGCGGCGGCGGCGGCAGCGACGGCGGCGGCGCCATGGTCGA
CGATGATGCTGATCAAGCCATAGATGAGGTGGATGAGGAGGAGACGGAGG
CGCAGGACGTCAAGGACACAATTCCCGGCGGTCGCGGCGGTGGCAGCGGC
GGCGGCCGTGGCAGCGGCAGCGGTGGCAGCGGCGCCGGCAGCAGCAGTGG
CCGCAGTGGCGGCGGCGGCAGCGTCAGTGATGCTCGCCGGGGCAGCAGCA
GCGGCGGCGGCGGCAGCAGTGGCGGCGGCGGCGGCAGCAGCGGCGGCGGC
GGCGGCGGCAGCGCTGCGGCTGCAGATGCGGCTGCAGCTGCGGCTGCGGC
TGCGGCTGCTGCCGCCGCAGCGGCAGCAGCAGCGGCAGCACCAGGCGCGG
CGTTTGTCTTTTCGCATGCACTGCTGAATCAGCCCTTTTGCACAGTGCCT
GCATCTGCAGTTAAGCCTTCCAGCTAGGTGCTGCACCGCTGCGCGCCGAG
CAGCAGCGTTCCCCATCACGCCCGCTGGCCGCCGCTGCTAG

Coding sequence (CDS) from alignment at Contig_55:164368..170008-

>mRNA_7257 ID=mRNA_7257|Name=jgi.p|Trimin1|350050|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2646bp|location=Sequence derived from alignment at Contig_55:164368..170008- (Tribonema minus UTEX_B_3156 )
ATGCCCTCCGAACCTGAGAGTTTCGAAATCACTGAGGTCGACGACGGCGC
TGCATTCCCTCTGGAGGCTGACGGCGAGGACTGCGGCGCCCTACAAAACA
TCCCCACGAATTCAAGCAGGATAGGCGTGTCGCCCAAGGTATCGTCTGCA
GCTGCTGTTGCTATCAAACCTGCTGCTCTGAACGGCACCGGCAGCCGTGC
GGCCGCAACCGGCGATGGCCACACCGCGCCAGTCAAGGGGCGATCCGCTA
TTGCCTCTGCCGTCCTGGCTGCCGCTCCCACAAATGCTAGCAACAGTCAG
CAGGGCGTCGCAGCGGCTGATGCTGTGGGCGCGCAACAGGCGCCGCCGCA
GTCGCTTCCGCCACGGCCGCAGCAGCCGCCCCCGCAGCAGCAGCAGCAGC
AGCTGCGGCAGCCGCAGCTGCCGCCGCTGTCGCTGGTGCTCCCTGCCGCA
GCCAACAAGCGCAGGAGGTCCTCGCCGCCGCCGCCGCCGCTGCCCAACGC
GGCCGCCGGCGAGCGACAGCAACCGGGCACGCGGCAGCGGCGCGAGCGCG
CGGGCATCAACCCCGCGTTTGCCGACTTCCACGTGGACATTAGTGGGGCA
GCGGGTGCGGAGCAGCCGCCCAGTCCGCCTTGTCCGCCGGCGGGCAGGGC
GTACAGTGGCGGCGGGGGAGGCGGTGGTGGCGGCGGCGGCAAGGGCGGGA
AGGGCCAGCCGAAGCGGCGCAAGTGCCTCATGCCGGACGACGAAGTCAAC
ATCCAGTACATACCGCTGAAGCCCAGGGACCCGCAGAACGAGGCGCCCGC
GCTGCGCGAGGACACCAAGGAGCGCCGCATCGCGCTCGTCAAGGTCGCCA
AGAGCCGCCGCGCGTTCTGGCGCGCGCGCCACGCCTTCGCGCGCCGCTTC
GCCGCGCACCCGTTCCTCCTGCACACCGCGCCGCCCGCGCACTGCGGCAT
GTGGCCGATGCTCGCGGGGCAGCCGTTAGACCTGCAGCGCCTGTTCCACG
CGGCGCTGCAGAAGGGCGGCTACCCGGCGCTCGAGGCGGACCGGAGCGTC
CCCGCGCCGCCCGTAACTTCAACTTCAAGTTCAAGTTCTCCGCGCGGGGG
CGAGGGGGGCGGGGGGTGGACGGGGGGGCCCGTGGCGAGCGAGGCGGCGC
AGGGGATGGAGCCGTGGGGGGCGCGGTGGGAGGCGGTGTACGAGACGATG
ACCAAGCCGCTGCGCAGCAAGGCGGTCACGGTGGCGGCGCTGGACGCGGT
CGCGTTCCGGCGCGCCAAGCTGCGGCGCGTCTACGAGTCCACGCTGCTGG
CCTTTGAGGAGCGCTGCCCCCAGGACATACTCGTTGCGGCGCTGGCGGCG
GGCGAGCGCGCGCTGGACCCCGCGGAGGCGGTCGGGTTTGTGAGGTGCGT
GTGCGGCCACAGCCACCAGTCGCCGCTGCCCACGGTCGACGCGGAGTGCA
AGGGGTGCGAGGGGTCGGGCGGCGGCGCGGCGGCGTCGCCCGCGGGTGTC
CTGCGGCGCACGCGCACGGACATGATCCAGTGCGACGTCTGCGCCGCGTG
GCAGCATTCGTACCACATGAGCGATGTGGGGCTGCTGAGGGTGCAGGACA
TCTCGGACAAGGTCTCCCTCGAACAGGAGAGCCACTTCTGCGAGCTCTGC
AGCGGCATCTACGATGACGGCTTCGAGGCGTTCTACAAGAAGCACGCGCC
GTTTGAGCGCCGCCCCGCTGTCAGCATGCTGCCCAAGATGTTGAAGTTTG
AGCTGCCCGATGCGTGGGCGCTGGAGAGTCTCTACCGCAAGGACGAGGGC
ATCAAGACGAAGCTCGACATGGCCATCTACAGAGGGTTTCTCAACATCTG
CATCAGCCGTAAGAAGATGATCCGCTCCATCACCGCGCTCGCGCACTTTG
TCACGGGCGACGGCACGCCTCGCCCCATCGTCGCTGACCGCGACGACATC
CCCGTAACCGCCGACGTAACCGCCGGCATCGACCCCGACACCAACCTGCC
ACACATGGTCATACCGCGCGGCCCCGTGCCCGTGCTGCGCGGCGCCGCCG
ACGCAGTCGACGCCGGCGGCGACACCGCCGCTGGCAGGCGCGCGCGCGCT
GCGGCGCTCGCCGCCGCCGGCAGCAGCCGCAACCTGGACGTCGCGGCGGC
GCCGCCGCCCAAAAAGCAGCGCGCCGCGCCGGTGCAGAAGCGGCGCGGCA
GCGGCGGCGGCCGCAGCAGCGTTGGCAGCGGCGGCGGCGGCAGCAGCGGC
GGCAGCGGCGGCGGCGGCAGCGACGGCGGCGGCGCCATGGTCGACGATGA
TGCTGATCAAGCCATAGATGAGGTGGATGAGGAGGAGACGGAGGCGCAGG
ACGTCAAGGACACAATTCCCGGCGGTCGCGGCGGTGGCAGCGGCGGCGGC
CGTGGCAGCGGCAGCGGTGGCAGCGGCGCCGGCAGCAGCAGTGGCCGCAC
AGCAGCGGCGGCGGCGGCAGCAGTGGCGGCGGCGGCGGCAGCAGCGGCGG
CGGCGGCGGCGGCAGCGCTGCGGCTGCAGATGCGGCTGCAGCTGCGGCTG
CGGCTGCGGCTGCTGCCGCCGCAGCGGCAGCAGCAGCGGCAGCACCAGGC
GCGGCCAGCAGCGTTCCCCATCACGCCCGCTGGCCGCCGCTGCTAG