Trimin1|153133|gw1.55.176.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|153133
Unique Name	Trimin1\|153133\|gw1.55.176.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	187

Homology

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BLAST of jgi.p|Trimin1|153133 vs. uniprot
Match: A0A836CBI6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBI6_9STRA)

HSP 1 Score: 368 bits (945), Expect = 7.170e-129
Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0

Query:    1 VAMSSRNDAQAAVSVSRAWQPRNCINLLIGDARRKQIMPLVVHLLPQDLAWWNASSDKLWEELQRLLKDQVITPYLATPSAVTGDEEEEKSTDAISTSRRKARRGEKCVQGEGLQFTFRFRPTKPVYSIITFNSVPAATQQQQTASKQAAPAYASLPLNEATLLAWVFKFDPANPYAPLPTETVEVF 187
            VAMSSRNDAQAAVSVSRAWQPRNCINLLIGDARRKQIMPLVVHLLPQDLAWWNASSDKLWEELQRLLKDQVITPYLATPSAVTGDEEEEKSTDAISTSRRKARRGEKCVQGEGLQFTFRFRPTKPVYSIITFNSVPAATQQQQTASKQAAPAYASLPLNEATLLAWVFKFDPANPYAPLPTETVEVF
Sbjct:    1 VAMSSRNDAQAAVSVSRAWQPRNCINLLIGDARRKQIMPLVVHLLPQDLAWWNASSDKLWEELQRLLKDQVITPYLATPSAVTGDEEEEKSTDAISTSRRKARRGEKCVQGEGLQFTFRFRPTKPVYSIITFNSVPAATQQQQTASKQAAPAYASLPLNEATLLAWVFKFDPANPYAPLPTETVEVF 187

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BLAST of jgi.p|Trimin1|153133 vs. uniprot
Match: D7G235_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G235_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 2.190e-25
Identity = 65/198 (32.83%), Postives = 112/198 (56.57%), Query Frame = 0

Query:    7 NDAQAAVSVSRAWQPRNCINLLIGDARRKQIMPLVVHLLPQDLAWWNASSDKLWEELQRLLKDQVITPYLATPSAVTGDEEEEKSTDAISTSRRKARRGEKCVQGEGLQFTFRFRPTKPVYSIITF--NSVPAATQQQQTASKQAA---------------PAYASLPLNEATLLAWVFKFDPANPYAPLPTETVEVF 187
            +D +   + +  WQ R  IN + G +R + + P+V+H+LP+D+ W++A +  L++EL+ LL+++VI+      +   GD++ E        SR++AR+ E C+QGE LQFT+R+R T P Y+++++  + +  A +   +A                    PA+  LPL+E+TLL WV+ FD  +PY P+P E    F
Sbjct:    7 DDEEETAASNVRWQGRTLINFVAGRSRLRTL-PVVIHILPKDIGWFSADAS-LFDELKLLLRERVIS------ATGNGDKDAE-----APKSRKRARKEEVCIQGERLQFTYRYRKTLPRYTVLSYTGDDIERANRGSSSAGSSKGKRCVGSNSXXXXXXXPAFRHLPLSESTLLVWVYPFDKDDPYRPVPNEAALQF 191

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|153133 vs. uniprot

BLAST of jgi.p|Trimin1|153133 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CBI6_9STRA	7.170e-129	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
D7G235_ECTSI	2.190e-25	32.83	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..102

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_55	contig	Contig_55:7273..7833 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|153133	mRNA_7234	Tribonema minus UTEX_B_3156	mRNA	Contig_55 7273..7833 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|153133|gw1.55.176.1 ID=Trimin1|153133|gw1.55.176.1|Name=jgi.p|Trimin1|153133|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=187bp
VAMSSRNDAQAAVSVSRAWQPRNCINLLIGDARRKQIMPLVVHLLPQDLA
WWNASSDKLWEELQRLLKDQVITPYLATPSAVTGDEEEEKSTDAISTSRR
KARRGEKCVQGEGLQFTFRFRPTKPVYSIITFNSVPAATQQQQTASKQAA
PAYASLPLNEATLLAWVFKFDPANPYAPLPTETVEVF