Trimin1|350032|estExt_Genemark1.C_Ctg_540096 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350032
Unique NameTrimin1|350032|estExt_Genemark1.C_Ctg_540096
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1060
Homology
BLAST of jgi.p|Trimin1|350032 vs. uniprot
Match: A0A836CCN0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCN0_9STRA)

HSP 1 Score: 1543 bits (3994), Expect = 0.000e+0
Identity = 1059/1059 (100.00%), Postives = 1059/1059 (100.00%), Query Frame = 0
Query:    1 MKLRLVVVPSLSLRESRRILLASVLVVGQWRLPFSAHVLRACSAYQSSGQAQGRASGMLERPPLEKGTLDTEEVLSFKSRTKHGSGLKETYSLVHCTDFRLDATARSKRSPDYMKTTGLAMLRWECRGGGGVGKKEGTEDSGDATASGDVEVLEEMLAVNNVGDSLLFARYRSDEAVTPPTSALPQPPPDNRGXXXXXXXXXXXXXXXXAPLPQPHXXXXXXXXXXXXXXXXXXXYGRAPPPFPRAWRFDRFSFQAKPTCQDFLGTGRRPATARSALRGSSXXXXXXXXXXXXDGGSERAHWSDPAMPDCTLVVGFDSGALATLEPHDGRGRFRVRALHNRDGRACRGGAAARCVRLVPRCARALRFVAAFDTGEILTFDIDLDQQTGSHSGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARQQNADGASEQHDSGQGPLLHMTVLPCVEGQNPVKRWRVCRDGGRRIGQHVTALAFSPDSYRKGGRRLLACASRDGGLRVIDYDKQELVVGFQPWFGGLLCVDWSPDSRYLVTGGEDDSVCLWSLETQQCVMRGTGHGGWVAGXXXXXXXXXXXXXXVAFDPWATRAPTPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTYRFVSVGQDASLCLWEHGALSQQQRSSAHHRKSSLGLNSNLNSFXXXXXXXXXAAGAAATALVTAGETADSDAPRYKSSGNLSGTALGLNGRAGXXXXXXXXXVFAAAFGGDAAMAEAGEGAGGTAPESKFNPPLKITETPTGTPLCCKQLARLPLTQVAVLRCGIVTLCEEGLLKVWQRPVIPPPQPPASYSARGASPEARSAALSPELSTDDYEEPRADLSDSDTGEGSAELPKLTLSASVLLREDGDANTGDXXXXTGVLITPLAGQRGISHAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMMTSMPVAASIGLVPAVGIKDSTPATPLGMGGRPRTSKSXXXXXXXXXXXXXXXXXXGDAHAPRKPSRLGRSSGHD 1059
            MKLRLVVVPSLSLRESRRILLASVLVVGQWRLPFSAHVLRACSAYQSSGQAQGRASGMLERPPLEKGTLDTEEVLSFKSRTKHGSGLKETYSLVHCTDFRLDATARSKRSPDYMKTTGLAMLRWECRGGGGVGKKEGTEDSGDATASGDVEVLEEMLAVNNVGDSLLFARYRSDEAVTPPTSALPQPPPDNRGXXXXXXXXXXXXXXXXAPLPQPHXXXXXXXXXXXXXXXXXXXYGRAPPPFPRAWRFDRFSFQAKPTCQDFLGTGRRPATARSALRGSSXXXXXXXXXXXXDGGSERAHWSDPAMPDCTLVVGFDSGALATLEPHDGRGRFRVRALHNRDGRACRGGAAARCVRLVPRCARALRFVAAFDTGEILTFDIDLDQQTGSHSGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARQQNADGASEQHDSGQGPLLHMTVLPCVEGQNPVKRWRVCRDGGRRIGQHVTALAFSPDSYRKGGRRLLACASRDGGLRVIDYDKQELVVGFQPWFGGLLCVDWSPDSRYLVTGGEDDSVCLWSLETQQCVMRGTGHGGWVAGXXXXXXXXXXXXXXVAFDPWATRAPTPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTYRFVSVGQDASLCLWEHGALSQQQRSSAHHRKSSLGLNSNLNSFXXXXXXXXXAAGAAATALVTAGETADSDAPRYKSSGNLSGTALGLNGRAGXXXXXXXXXVFAAAFGGDAAMAEAGEGAGGTAPESKFNPPLKITETPTGTPLCCKQLARLPLTQVAVLRCGIVTLCEEGLLKVWQRPVIPPPQPPASYSARGASPEARSAALSPELSTDDYEEPRADLSDSDTGEGSAELPKLTLSASVLLREDGDANTGDXXXXTGVLITPLAGQRGISHAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMMTSMPVAASIGLVPAVGIKDSTPATPLGMGGRPRTSKSXXXXXXXXXXXXXXXXXXGDAHAPRKPSRLGRSSGHD
Sbjct:    1 MKLRLVVVPSLSLRESRRILLASVLVVGQWRLPFSAHVLRACSAYQSSGQAQGRASGMLERPPLEKGTLDTEEVLSFKSRTKHGSGLKETYSLVHCTDFRLDATARSKRSPDYMKTTGLAMLRWECRGGGGVGKKEGTEDSGDATASGDVEVLEEMLAVNNVGDSLLFARYRSDEAVTPPTSALPQPPPDNRGXXXXXXXXXXXXXXXXAPLPQPHXXXXXXXXXXXXXXXXXXXYGRAPPPFPRAWRFDRFSFQAKPTCQDFLGTGRRPATARSALRGSSXXXXXXXXXXXXDGGSERAHWSDPAMPDCTLVVGFDSGALATLEPHDGRGRFRVRALHNRDGRACRGGAAARCVRLVPRCARALRFVAAFDTGEILTFDIDLDQQTGSHSGDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKARQQNADGASEQHDSGQGPLLHMTVLPCVEGQNPVKRWRVCRDGGRRIGQHVTALAFSPDSYRKGGRRLLACASRDGGLRVIDYDKQELVVGFQPWFGGLLCVDWSPDSRYLVTGGEDDSVCLWSLETQQCVMRGTGHGGWVAGXXXXXXXXXXXXXXVAFDPWATRAPTPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTYRFVSVGQDASLCLWEHGALSQQQRSSAHHRKSSLGLNSNLNSFXXXXXXXXXAAGAAATALVTAGETADSDAPRYKSSGNLSGTALGLNGRAGXXXXXXXXXVFAAAFGGDAAMAEAGEGAGGTAPESKFNPPLKITETPTGTPLCCKQLARLPLTQVAVLRCGIVTLCEEGLLKVWQRPVIPPPQPPASYSARGASPEARSAALSPELSTDDYEEPRADLSDSDTGEGSAELPKLTLSASVLLREDGDANTGDXXXXTGVLITPLAGQRGISHAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMMTSMPVAASIGLVPAVGIKDSTPATPLGMGGRPRTSKSXXXXXXXXXXXXXXXXXXGDAHAPRKPSRLGRSSGHD 1059          
BLAST of jgi.p|Trimin1|350032 vs. uniprot
Match: D7G1Z3_ECTSI (Catabolite repression protein creC n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z3_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 7.460e-51
Identity = 142/407 (34.89%), Postives = 182/407 (44.72%), Query Frame = 0
Query:  474 VEGQNPVKRWRVCRDGGRRIGQHVTALAFSPDSYRKGGRRLLACASRDGGLRVIDYDKQELVVGFQPWFGGLLCVDWSPDSRYLVTGGEDDSVCLWSLETQQCVMRGTGHGGWVAGXXXXXXXXXXXXXXVAFDPWATRAPTPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTYRFVSVGQDASLCLWEHGALSQQQRSSA-HHRKSSLGLNSNLNSFXXXXXXXXXAAGAAATALVTAGETADSDAPRYKSSGNLSGTALGLNGRAGXXXXXXXXXVFAAAFGGDAAMAEAGEGAGGTAPESKFN------------------------------PPLKITETPTGTPLCCKQLARLPLTQVAVLRCGIVTLCEEGLLKVWQRPVIPPPQPP 849
            V G NPV RWRV  DG     + +TA+ F+P   +  GRRL+A A+ DG +RV+DYD+Q LV GF+ WFGG+LC+DWSPD RY+VTGGEDD+V LW +ET+ CV+RG GHG WV G              VAFD W +R P                                              YRF SVG+DA LC+WEH  ++      A               S          AA A   A   +G  +      ++  G L G A+ + G+             AA+ GG+ A A                                              P L    TP G PLCCK+LA++PL+QV V+R G+VTLC EGLLK+W RP +PPP PP
Sbjct:  574 VAGANPVSRWRVSSDG-----REITAMVFAP-LQQADGRRLVALAALDGVVRVVDYDEQALVAGFKSWFGGILCLDWSPDGRYIVTGGEDDAVTLWCVETRTCVLRGEGHGSWVTG--------------VAFDYWTSRRPY---------------------------------------------YRFTSVGEDARLCMWEHDEMAGSLLHGAGXXXXXXXXXXXXXXSLQHRLRLRTLAAAAGPLAATVSGRRSRRG---FRKDGRLRGMAM-VAGKKTTQRWRERSEWRAASSGGNPAAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVYPALSRQSTPRGEPLCCKRLAQVPLSQVMVVRAGVVTLCAEGLLKLWARPTMPPPLPP 911          
BLAST of jgi.p|Trimin1|350032 vs. uniprot
Match: A0A6H5L471_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L471_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 3.010e-40
Identity = 148/510 (29.02%), Postives = 191/510 (37.45%), Query Frame = 0
Query:  474 VEGQNPVKRWRVCRDGGRRIGQHVTALAFSPDSYRKGGRRLLACASRDGGLRVIDYDKQELVVGFQPWFGGLLCVDWSPDSRYLVTGGEDDSVCLWSLETQQCVMRGTGHGGWVAGXXXXXXXXXXXXXXVAFDPWATRAPTPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTYRFVSVGQDASLCLWEHGALSQQQRSSA------------------HHRKSSLGLNSNLNSFXXXXXXXXXAAGAAATALVTAGETADSDA---------PRYKSS---GNLSGT--------ALGLNGRAGXXXXXXXXXVFAAAFGGDAAMAEAGEGA-----------------------------------------GGTA-------------------------------------------------------PESKFNPPLKITETPTGTPLCCKQLARLPLTQVAVLRCGIVTLCEEGLLKVWQRPVIPPPQPP 849
            V G NPV  WRV  DG     + +TA+ F+P   +  GRRL+A A+ DG +RV+DYD+Q LV GF+ WFGG+LC+DWSPD RY+VTGGEDD+V LW +ET+ CV+RG GHG WV G              VAFD W +R P                                              YRF SVG+DA LC+WEH  ++      A                  H  KSS  L+   +            A A++  L   G  A  +          P  +SS   G+  G         A+G                +    GG A +   G G+                                         GG A                                                             P L    TP G PLCCK+LA++PL+QV V+R G+VTLC +GLLK+W RP +PPP PP
Sbjct:  605 VAGANPVSMWRVSSDG-----REITAMVFAP-LQQADGRRLVALAALDGVVRVVDYDEQALVAGFKSWFGGILCLDWSPDMRYIVTGGEDDAVTLWCVETRTCVLRGEGHGSWVTG--------------VAFDYWTSRRPY---------------------------------------------YRFTSVGEDARLCMWEHDEMAGSLLHGAGXXXXXXXXXXXXXXGFQHRYKSSENLSRQRSKSSESLALSHSLAEASSKNLSRRGGAAGGEGVGLPVSTGVPEGRSSPRDGDGGGEEDDAEAAGAVGAPSSLPPDEPLRGDSTWPVLGGGLARLGRGGSGSAXXXXXXXXXXXXXXXXXXXXXXXXXXRAPLSLPSRGALFFGGAARXXXXXXXXXXPXXXXXXXXXRRGKXXXXXXXXXREAAEEGXXXXXXXXXXXXXXXAGHVYPALSRQLTPRGEPLCCKRLAQVPLSQVMVVRAGVVTLCADGLLKLWARPTMPPPLPP 1049          
BLAST of jgi.p|Trimin1|350032 vs. uniprot
Match: UPI0020199E4F (dystrophia myotonica WD repeat-containing protein isoform X1 n=3 Tax=Perognathus longimembris pacificus TaxID=214514 RepID=UPI0020199E4F)

HSP 1 Score: 122 bits (305), Expect = 1.140e-24
Identity = 138/403 (34.24%), Postives = 169/403 (41.94%), Query Frame = 0
Query:  477 QNPVKRWRVCRDGGRRIGQHVTALAFSPDSYRKGGRRLLACASRDGGLRVIDYDKQELVVGFQPWFGGLLCVDWSPDSRYLVTGGEDDSVCLWSLETQQCVMRGTGHGGWVAGXXXXXXXXXXXXXXVAFDPWATRAPTPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTYRFVSVGQDASLCLWE--------HGALSQQQRSSAHHRKSSLGLNSNLNSFXXXXXXXXXAAG--------AAATALV--TAGETA------------DSDAPRYKSSGNLSGTALGLNGRAGXXXXXXXXXVFAAAFGGDAAMAEAGEGAGGTAPESKFNPPL--------KITETPTGTPLCCKQLARLPLTQVAVLRCGIVTLCEEGLLKVWQRP 841
            +NP+ +W V           +   AFSPD       R LAC S+DG LRV  +D   L    + +FGGLLCV WSPD RY+VTGGEDD V +WS    + V RG GH  WV                VAFDP+ TRA  P S        XXXX  XXXXXXXXX                  TYRF S GQD   CLW+        H  L++ +        +  G        XXXXX    A G        AAA A V  + G  A            D +  RY S GN+S       G AG                        G+   G AP S+ +P          +I E P   PL CK++A+  LT +  L   I+T C+EGL+  W RP
Sbjct:  272 RNPLAKWAVGEGP-------LNEFAFSPDG------RHLACVSQDGCLRVFHFDSMLLRGLMKSYFGGLLCVCWSPDGRYVVTGGEDDLVTVWSFTEGRVVARGHGHKSWV--------------NAVAFDPYTTRAEEPASASRDGDNGXXXXRSXXXXXXXXXAGSGGGAPLSSLPRAGSVTYRFGSAGQDTQFCLWDLTEDVLSPHPPLARARTLPGTPGATPPGPXXXXXXXXXXXXLPHPAGGGGKAGAPGAAAEAGVPFSIGRFATLTLQERRERGTDKEHKRYHSLGNIS------RGGAGGG----------------------GDKPSGPAPRSRLDPAKVLGTALCPRIHEVPLLEPLVCKKIAQERLTVLLFLEDCIITACQEGLICTWARP 619          
BLAST of jgi.p|Trimin1|350032 vs. uniprot
Match: A0A4X2K7K2_VOMUR (Uncharacterized protein n=1 Tax=Vombatus ursinus TaxID=29139 RepID=A0A4X2K7K2_VOMUR)

HSP 1 Score: 119 bits (298), Expect = 3.620e-24
Identity = 113/404 (27.97%), Postives = 146/404 (36.14%), Query Frame = 0
Query:  477 QNPVKRWRVCRDGGRRIGQHVTALAFSPDSYRKGGRRLLACASRDGGLRVIDYDKQELVVGFQPWFGGLLCVDWSPDSRYLVTGGEDDSVCLWSLETQQCVMRGTGHGGWVAGXXXXXXXXXXXXXXVAFDPWATRAPTPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTYRFVSVGQDASLCLWE----------------------------HGALSQ---QQRSSAHHRKSSLGLNSNLNSFXXXXXXXXXAAGAAATALVTAGETADSDAPRYKSSGNLSGTALGLNGRAGXXXXXXXXXVFAAAFGGDAAMAEAGEGAGGTAPESKFNPPL--------KITETPTGTPLCCKQLARLPLTQVAVLRCGIVTLCEEGLLKVWQRP 841
            +NP+ +W V           +   AFSPD       R LAC S+DG LRV  +D   L    + +FGGLLCV WSPD RY+VTGGEDD V +WS    + V RG GH  WV                VAFDP+ TR+                                              TYRF S GQD   CLW+                             G L +   +  S  H   S  G  ++                A  T      + AD +  RY S GN+S    G +G                           G+  GG AP  + +P          +I E P   PL CK++A+  LT +  L   I+T C+EGL+  W RP
Sbjct:  209 RNPMAKWAVGEGP-------LNEFAFSPDG------RHLACVSQDGCLRVFHFDSMLLRGLMKSYFGGLLCVCWSPDGRYVVTGGEDDLVTVWSFTEARVVARGHGHKSWV--------------NAVAFDPYTTRSEEEPEGEGTTGGSEREAGSLPRLPPPAV------------------TYRFGSAGQDTQFCLWDLTEDVLYPRPPLARPRALAGSTEATPITPGPLPRSLSRSNSLPHPAVSGKGAGASTGGVTEPGTPFSIGKFATLTLQERRDKGADKEHKRYHSLGNISRGGGGGSG---------------------------GDKLGGPAPRGRLDPAKVLGTALCPRIHEVPLLEPLVCKKIAQERLTVLLFLEDCIITACQEGLICTWARP 540          
BLAST of jgi.p|Trimin1|350032 vs. uniprot
Match: UPI001CFECBB3 (dystrophia myotonica WD repeat-containing protein n=1 Tax=Gracilinanus agilis TaxID=191870 RepID=UPI001CFECBB3)

HSP 1 Score: 118 bits (295), Expect = 6.170e-24
Identity = 113/404 (27.97%), Postives = 146/404 (36.14%), Query Frame = 0
Query:  477 QNPVKRWRVCRDGGRRIGQHVTALAFSPDSYRKGGRRLLACASRDGGLRVIDYDKQELVVGFQPWFGGLLCVDWSPDSRYLVTGGEDDSVCLWSLETQQCVMRGTGHGGWVAGXXXXXXXXXXXXXXVAFDPWATRAPTPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTYRFVSVGQDASLCLWE----------------------------HGALSQ---QQRSSAHHRKSSLGLNSNLNSFXXXXXXXXXAAGAAATALVTAGETADSDAPRYKSSGNLSGTALGLNGRAGXXXXXXXXXVFAAAFGGDAAMAEAGEGAGGTAPESKFNPPL--------KITETPTGTPLCCKQLARLPLTQVAVLRCGIVTLCEEGLLKVWQRP 841
            +NP+ +W V           +   AFSPD       R LAC S+DG LRV  +D   L    + +FGGLLCV WSPD RY+VTGGEDD V +WS    + V RG GH  WV                VAFDP+ TR+                                              TYRF S GQD   CLW+                             G+L +   +  S  H   S  G  +                 A  T      + AD +  RY S GN+S       G  G                       +G+  GG AP  + +P          +I E P   PL CK++A+  LT +  L   I+T C+EGL+  W RP
Sbjct:  169 RNPLAKWAVGEGP-------LNEFAFSPDG------RHLACVSQDGCLRVFHFDSMLLRGLMKSYFGGLLCVCWSPDGRYVVTGGEDDLVTVWSFTEARVVARGHGHKSWV--------------NAVAFDPYTTRSEEEPEEEGAPQSGSELEAGSLPRLPPPAV-----------------TYRFGSAGQDTQFCLWDLTEDVLYPRPPLARPRALAGGAEATPVTPGSLPRSLSRSNSLPHPAVSGKGAGAGTGGATEPGTPFSIGKFATLTLQERRDKGADKEHKRYHSLGNIS------RGSGGGG--------------------SSGDKLGGPAPRGRLDPAKVLGTALCPRIHEVPLLEPLVCKKIAQERLTVLLFLEDCIITACQEGLICTWARP 502          
BLAST of jgi.p|Trimin1|350032 vs. uniprot
Match: A0A0L0G8X0_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G8X0_9EUKA)

HSP 1 Score: 110 bits (275), Expect = 6.710e-24
Identity = 58/151 (38.41%), Postives = 79/151 (52.32%), Query Frame = 0
Query:  459 DSGQGPLLHMTVLPCVEGQNPVKRWRVCRDGGRRIGQHVTALAFSPDSYRKGGRRLLACASRDGGLRVIDYDKQELVVGFQPWFGGLLCVDWSPDSRYLVTGGEDDSVCLWSLETQQCVMRGTGHGGWVAGXXXXXXXXXXXXXXVAFDPW 609
            ++G+       V+   +  NP+ RWRV +         + A  FSPD      ++ +A  S+DG LR++D     L+V  Q +FG LLCV WSPD +Y+VTGGEDD V +WS+E +  V RG GH  WV                VAFDPW
Sbjct:   20 EAGRNVFNGFAVMHPRKISNPITRWRVGKGS-------INAFQFSPD------QQSVAIVSQDGCLRIVDVKADRLIVTLQSYFGALLCVSWSPDGKYIVTGGEDDLVSIWSVENKGLVARGEGHSSWVVA--------------VAFDPW 143          
BLAST of jgi.p|Trimin1|350032 vs. uniprot
Match: A0A8C0XDN8_CASCN (DM1 locus, WD repeat containing n=7 Tax=Rodentia TaxID=9989 RepID=A0A8C0XDN8_CASCN)

HSP 1 Score: 119 bits (297), Expect = 9.220e-24
Identity = 117/412 (28.40%), Postives = 149/412 (36.17%), Query Frame = 0
Query:  477 QNPVKRWRVCRDGGRRIGQHVTALAFSPDSYRKGGRRLLACASRDGGLRVIDYDKQELVVGFQPWFGGLLCVDWSPDSRYLVTGGEDDSVCLWSLETQQCVMRGTGHGGWVAGXXXXXXXXXXXXXXVAFDPWATRAPTPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTYRFVSVGQDASLCLWE--------HGALSQQQR----------SSAHHRKSSLGLNSNLNSFXXXXXXXXXAAGAAATALVTAGETA---------------------DSDAPRYKSSGNLSGTALGLNGRAGXXXXXXXXXVFAAAFGGDAAMAEAGEGAGGTAPESKFNPPL--------KITETPTGTPLCCKQLARLPLTQVAVLRCGIVTLCEEGLLKVWQRP 841
            +NP+ +W V           +   AFSPD       R LAC S+DG LRV  +D   L    + +FGGLLCV WSPD RY+VTGGEDD V +WS    + V RG GH  WV                VAFDP+ TRA   TS                                         TYRF S GQD   CLW+        H  L++ +           ++   R    GL     S          A G  A    TA E                       + +  RY S GN+S    G                              G+   G AP S+ +P          +I E P   PL CK++A+  LT +  L   I+T C+EGL+  W RP
Sbjct:  272 RNPLAKWAVGEGP-------LNEFAFSPDG------RHLACVSQDGCLRVFHFDSMLLRGLMKSYFGGLLCVCWSPDGRYVVTGGEDDLVTVWSFTEGRVVARGHGHKSWV--------------NAVAFDPYTTRAEEATSATGGGDRSGEEELPEAPGTSSGGGAPLSPLPKAGSI-----TYRFGSAGQDTQFCLWDLTEDVLSPHPPLARTRTLPGTPGATPPATGSSRAGEPGLGPLPRSLSRSNSLPHPAGGGKAGGPGTATEPGTPFSIGRFATLTLQERRDRGTEKEHKRYHSLGNISRGGSG------------------------------GDKPSGPAPRSRLDPAKVLGTALCPRIHEVPLLEPLVCKKIAQERLTVLLFLEDCIITACQEGLICTWARP 621          
BLAST of jgi.p|Trimin1|350032 vs. uniprot
Match: UPI000FFD8644 (dystrophia myotonica WD repeat-containing protein-like n=1 Tax=Vombatus ursinus TaxID=29139 RepID=UPI000FFD8644)

HSP 1 Score: 119 bits (298), Expect = 1.030e-23
Identity = 113/404 (27.97%), Postives = 146/404 (36.14%), Query Frame = 0
Query:  477 QNPVKRWRVCRDGGRRIGQHVTALAFSPDSYRKGGRRLLACASRDGGLRVIDYDKQELVVGFQPWFGGLLCVDWSPDSRYLVTGGEDDSVCLWSLETQQCVMRGTGHGGWVAGXXXXXXXXXXXXXXVAFDPWATRAPTPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTYRFVSVGQDASLCLWE----------------------------HGALSQ---QQRSSAHHRKSSLGLNSNLNSFXXXXXXXXXAAGAAATALVTAGETADSDAPRYKSSGNLSGTALGLNGRAGXXXXXXXXXVFAAAFGGDAAMAEAGEGAGGTAPESKFNPPL--------KITETPTGTPLCCKQLARLPLTQVAVLRCGIVTLCEEGLLKVWQRP 841
            +NP+ +W V           +   AFSPD       R LAC S+DG LRV  +D   L    + +FGGLLCV WSPD RY+VTGGEDD V +WS    + V RG GH  WV                VAFDP+ TR+                                              TYRF S GQD   CLW+                             G L +   +  S  H   S  G  ++                A  T      + AD +  RY S GN+S    G +G                           G+  GG AP  + +P          +I E P   PL CK++A+  LT +  L   I+T C+EGL+  W RP
Sbjct:  429 RNPMAKWAVGEGP-------LNEFAFSPDG------RHLACVSQDGCLRVFHFDSMLLRGLMKSYFGGLLCVCWSPDGRYVVTGGEDDLVTVWSFTEARVVARGHGHKSWV--------------NAVAFDPYTTRSEEEPEGEGTTGGSEREAGSLPRLPPPAV------------------TYRFGSAGQDTQFCLWDLTEDVLYPRPPLARPRALAGSTEATPITPGPLPRSLSRSNSLPHPAVSGKGAGASTGGVTEPGTPFSIGKFATLTLQERRDKGADKEHKRYHSLGNISRGGGGGSG---------------------------GDKLGGPAPRGRLDPAKVLGTALCPRIHEVPLLEPLVCKKIAQERLTVLLFLEDCIITACQEGLICTWARP 760          
BLAST of jgi.p|Trimin1|350032 vs. uniprot
Match: A0A8C5K049_JACJA (DM1 locus, WD repeat containing n=2 Tax=Eutheria TaxID=9347 RepID=A0A8C5K049_JACJA)

HSP 1 Score: 118 bits (295), Expect = 1.170e-23
Identity = 118/395 (29.87%), Postives = 149/395 (37.72%), Query Frame = 0
Query:  477 QNPVKRWRVCRDGGRRIGQHVTALAFSPDSYRKGGRRLLACASRDGGLRVIDYDKQELVVGFQPWFGGLLCVDWSPDSRYLVTGGEDDSVCLWSLETQQCVMRGTGHGGWVAGXXXXXXXXXXXXXXVAFDPWATRAPTPTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHTYRFVSVGQDASLCLWEHGALSQQQRSSAHHRKSSLGLNSNLNSFXXXXXXXXXAAGAAATALVTAGETADSDAPRYKSSGN-----LSGTALGLNGRAGXXXXXXXXXVFAAA-------------FGGDAAMAEAGEGAG----GTAPESKFNPPL--------KITETPTGTPLCCKQLARLPLTQVAVLRCGIVTLCEEGLLKVWQRP 841
            +NP+ +W V           +   AFSPD       R LAC S+DG LRV  +D   L    + +FGGLLCV WSPD RY+VTGGEDD V +WS    + V RG GH  WV                VAFDP+ TRA   +S                                         TYRF S GQD   CLW+   L++   S       +  L                 A   AT    AGE   S  PR  S  N       G   G  G A           FA               +     ++  G G+G    G  P S+ +P          +I E P   PL CK++A+  LT +  L   I+T C+EGL+  W RP
Sbjct:  216 RNPLAKWAVGEGP-------LNEFAFSPDG------RHLACVSQDGCLRVFHFDSMLLRGLMKSYFGGLLCVCWSPDGRYVVTGGEDDLVTVWSFTEGRVVARGHGHKSWV--------------NAVAFDPYTTRAEEASSAGADGDRGEEEAEAAGPGSNGGAPLSPLPKAGSI-------TYRFGSAGQDTQFCLWD---LTEDVLSPHPPLARTRTL------------PGTPGATPPATGSAWAGEPGPSSLPRSLSRSNSLPHPAGGGKAGGPGAATEAGPPFSIGRFATLTLQERRDRDQHKRYHSLGNISRGGSGSGDKPSGPVPRSRLDPAKVLGTALCPRIHEVPLLEPLVCKKIAQERLTVLLFLEDCIITACQEGLICTWARP 561          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350032 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CCN0_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G1Z3_ECTSI7.460e-5134.89Catabolite repression protein creC n=1 Tax=Ectocar... [more]
A0A6H5L471_9PHAE3.010e-4029.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0020199E4F1.140e-2434.24dystrophia myotonica WD repeat-containing protein ... [more]
A0A4X2K7K2_VOMUR3.620e-2427.97Uncharacterized protein n=1 Tax=Vombatus ursinus T... [more]
UPI001CFECBB36.170e-2427.97dystrophia myotonica WD repeat-containing protein ... [more]
A0A0L0G8X0_9EUKA6.710e-2438.41Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A8C0XDN8_CASCN9.220e-2428.40DM1 locus, WD repeat containing n=7 Tax=Rodentia T... [more]
UPI000FFD86441.030e-2327.97dystrophia myotonica WD repeat-containing protein-... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 476..528
e-value: 2.0
score: 15.1
coord: 531..570
e-value: 2.5E-4
score: 30.4
coord: 631..676
e-value: 0.16
score: 21.1
coord: 804..839
e-value: 190.0
score: 2.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 546..570
e-value: 2.4E-4
score: 21.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 545..579
score: 12.212779
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 617..713
e-value: 6.0E-8
score: 34.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 297..616
e-value: 6.5E-38
score: 133.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 442..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 957..986
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..410
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 872..886
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 849..893
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..300
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 962..981
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1004..1059
NoneNo IPR availablePANTHERPTHR14107:SF16AT02583Pcoord: 591..612
NoneNo IPR availablePANTHERPTHR14107WD REPEAT PROTEINcoord: 309..589
coord: 635..842
NoneNo IPR availablePANTHERPTHR14107WD REPEAT PROTEINcoord: 591..612
NoneNo IPR availablePANTHERPTHR14107:SF16AT02583Pcoord: 309..589
coord: 635..842
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 538..573
score: 8.940149
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 495..690

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_54contigContig_54:745021..765443 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350032mRNA_7110Tribonema minus UTEX_B_3156 mRNAContig_54 744939..765443 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350032|estExt_Genemark1.C_Ctg_540096 ID=Trimin1|350032|estExt_Genemark1.C_Ctg_540096|Name=jgi.p|Trimin1|350032|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1060bp
MKLRLVVVPSLSLRESRRILLASVLVVGQWRLPFSAHVLRACSAYQSSGQ
AQGRASGMLERPPLEKGTLDTEEVLSFKSRTKHGSGLKETYSLVHCTDFR
LDATARSKRSPDYMKTTGLAMLRWECRGGGGVGKKEGTEDSGDATASGDV
EVLEEMLAVNNVGDSLLFARYRSDEAVTPPTSALPQPPPDNRGDEAVTPP
TSTLQHPPPAPLPQPHLPPSHHPPGYPPPQHAPPQYGRAPPPFPRAWRFD
RFSFQAKPTCQDFLGTGRRPATARSALRGSSGGGGGGYDAASSDGGSERA
HWSDPAMPDCTLVVGFDSGALATLEPHDGRGRFRVRALHNRDGRACRGGA
AARCVRLVPRCARALRFVAAFDTGEILTFDIDLDQQTGSHSGDDSGGPPP
GMSTGAAAAAAALAASQPANSSGSLRRRPSYTSSTAAAAAAAAAKARQQN
ADGASEQHDSGQGPLLHMTVLPCVEGQNPVKRWRVCRDGGRRIGQHVTAL
AFSPDSYRKGGRRLLACASRDGGLRVIDYDKQELVVGFQPWFGGLLCVDW
SPDSRYLVTGGEDDSVCLWSLETQQCVMRGTGHGGWVAGCVMRGTGHSSW
VAGVAFDPWATRAPTPTSNCVMRGTGHGSWFAGCVMRGTGHGSWVAGVAF
DPWATRAPHTYRFVSVGQDASLCLWEHGALSQQQRSSAHHRKSSLGLNSN
LNSFNSNLNSFSSAAGAAATALVTAGETADSDAPRYKSSGNLSGTALGLN
GRAGGGGGGGGGAVFAAAFGGDAAMAEAGEGAGGTAPESKFNPPLKITET
PTGTPLCCKQLARLPLTQVAVLRCGIVTLCEEGLLKVWQRPVIPPPQPPA
SYSARGASPEARSAALSPELSTDDYEEPRADLSDSDTGEGSAELPKLTLS
ASVLLREDGDANTGDGDANTGVLITPLAGQRGISHAASSKKKGGVIAFTK
SLFFPGGGNGSDDKRNGSSHNGSSSSVPPRKRLMMTSMPVAASIGLVPAV
GIKDSTPATPLGMGGRPRTSKSSAGAAAAATAAGAAAAAAGDAHAPRKPS
RLGRSSGHD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf