Trimin1|168009|e_gw1.54.238.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|168009
Unique NameTrimin1|168009|e_gw1.54.238.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length75
Homology
BLAST of jgi.p|Trimin1|168009 vs. uniprot
Match: A0A835YSG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSG3_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.060e-45
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
Query:    1 MNTSLQNTKSRSLRYRILLTVSLLTIVRITYAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIFTNV 74
            MNTSLQNTKSRSLRYRILLTVSLLTIVRITYAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIFTNV
Sbjct:    1 MNTSLQNTKSRSLRYRILLTVSLLTIVRITYAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIFTNV 74          
BLAST of jgi.p|Trimin1|168009 vs. uniprot
Match: B6CWT4_9PHAE (PSI P700 chlorophyll a apoprotein A1 (Fragment) n=3 Tax=Phaeophyceae TaxID=2870 RepID=B6CWT4_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 5.480e-21
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0
Query:   31 YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF 71
            YAMPPYPYIATDYATQLSLFTHH+WIGGFCIVGGAAHGAIF
Sbjct:   81 YAMPPYPYIATDYATQLSLFTHHMWIGGFCIVGGAAHGAIF 121          
BLAST of jgi.p|Trimin1|168009 vs. uniprot
Match: A0A7S2LFM9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LFM9_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.420e-20
Identity = 38/41 (92.68%), Postives = 41/41 (100.00%), Query Frame = 0
Query:   31 YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF 71
            YAMPPYPY+ATDYATQLSLFTHH+WIGGFC+VGGAAHGAIF
Sbjct:   74 YAMPPYPYLATDYATQLSLFTHHMWIGGFCVVGGAAHGAIF 114          
BLAST of jgi.p|Trimin1|168009 vs. uniprot
Match: A0A060IBC1_9PHAE (Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) n=2 Tax=PX clade TaxID=569578 RepID=A0A060IBC1_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 1.500e-20
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0
Query:   31 YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF 71
            YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF
Sbjct:  305 YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF 345          
BLAST of jgi.p|Trimin1|168009 vs. uniprot
Match: A5HW74_9STRA (Photosystem I P700 chlorophyll A apoprotein A1 (Fragment) n=3 Tax=Xanthophyceae TaxID=2833 RepID=A5HW74_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.650e-20
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0
Query:   31 YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF 71
            YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF
Sbjct:  292 YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF 332          
BLAST of jgi.p|Trimin1|168009 vs. uniprot
Match: A0A0F6WGP2_9STRA (PSI P700 apoprotein A1 (Fragment) n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A0F6WGP2_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.680e-20
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0
Query:   31 YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF 71
            YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF
Sbjct:  305 YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF 345          
BLAST of jgi.p|Trimin1|168009 vs. uniprot
Match: B7ZEN0_9STRA (Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) n=3 Tax=Xanthophyceae TaxID=2833 RepID=B7ZEN0_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.690e-20
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0
Query:   31 YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF 71
            YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF
Sbjct:  281 YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF 321          
BLAST of jgi.p|Trimin1|168009 vs. uniprot
Match: A0A0F6YS29_9STRA (PSI P700 apoprotein A1 (Fragment) n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A0F6YS29_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.740e-20
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0
Query:   31 YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF 71
            YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF
Sbjct:  321 YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF 361          
BLAST of jgi.p|Trimin1|168009 vs. uniprot
Match: A5HW92_9STRA (Photosystem I P700 chlorophyll a apoprotein A1 (Fragment) n=4 Tax=Xanthophyceae TaxID=2833 RepID=A5HW92_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.920e-20
Identity = 41/41 (100.00%), Postives = 41/41 (100.00%), Query Frame = 0
Query:   31 YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF 71
            YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF
Sbjct:  325 YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF 365          
BLAST of jgi.p|Trimin1|168009 vs. uniprot
Match: D4HLT3_9PHAE (Photosystem I P700 reaction center apoprotein A1 (Fragment) n=1 Tax=Ascoseira mirabilis TaxID=76830 RepID=D4HLT3_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 2.060e-20
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0
Query:   31 YAMPPYPYIATDYATQLSLFTHHVWIGGFCIVGGAAHGAIF 71
            YAMPPYPYIATDYATQLSLFTHH+WIGGFCIVGGAAHGAIF
Sbjct:  305 YAMPPYPYIATDYATQLSLFTHHIWIGGFCIVGGAAHGAIF 345          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168009 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YSG3_9STRA1.060e-45100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B6CWT4_9PHAE5.480e-2197.56PSI P700 chlorophyll a apoprotein A1 (Fragment) n=... [more]
A0A7S2LFM9_9STRA1.420e-2092.68Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A060IBC1_9PHAE1.500e-20100.00Photosystem I P700 chlorophyll a apoprotein A1 (Fr... [more]
A5HW74_9STRA1.650e-20100.00Photosystem I P700 chlorophyll A apoprotein A1 (Fr... [more]
A0A0F6WGP2_9STRA1.680e-20100.00PSI P700 apoprotein A1 (Fragment) n=2 Tax=Bacillar... [more]
B7ZEN0_9STRA1.690e-20100.00Photosystem I P700 chlorophyll a apoprotein A1 (Fr... [more]
A0A0F6YS29_9STRA1.740e-20100.00PSI P700 apoprotein A1 (Fragment) n=3 Tax=Bacillar... [more]
A5HW92_9STRA1.920e-20100.00Photosystem I P700 chlorophyll a apoprotein A1 (Fr... [more]
D4HLT3_9PHAE2.060e-2097.56Photosystem I P700 reaction center apoprotein A1 (... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001280Photosystem I PsaA/PsaBPFAMPF00223PsaA_PsaBcoord: 23..71
e-value: 2.0E-19
score: 69.4
IPR036408Photosystem I PsaA/PsaB superfamilyGENE3D1.20.1130.10Photosystem I PsaA/PsaBcoord: 1..73
e-value: 2.6E-22
score: 80.7
IPR036408Photosystem I PsaA/PsaB superfamilySUPERFAMILY81558Photosystem I subunits PsaA/PsaBcoord: 28..71
NoneNo IPR availablePANTHERPTHR30128OUTER MEMBRANE PROTEIN, OMPA-RELATEDcoord: 24..71
IPR006243Photosystem I PsaAPANTHERPTHR30128:SF60PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A1coord: 24..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_54contigContig_54:626241..626465 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168009mRNA_7091Tribonema minus UTEX_B_3156 mRNAContig_54 626241..626465 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|168009|e_gw1.54.238.1 ID=Trimin1|168009|e_gw1.54.238.1|Name=jgi.p|Trimin1|168009|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=75bp
MNTSLQNTKSRSLRYRILLTVSLLTIVRITYAMPPYPYIATDYATQLSLF
THHVWIGGFCIVGGAAHGAIFTNV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001280PSI_PsaA/B
IPR036408PSI_PsaA/B_sf
IPR006243PSI_PsaA