mRNA_7029 (mRNA) Tribonema minus UTEX_B_3156
|
Overview
Homology
BLAST of jgi.p|Trimin1|167830 vs. uniprot
Match: A0A835YR86_9STRA (Aspartyl/Asparaginyl beta-hydroxylase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR86_9STRA) HSP 1 Score: 456 bits (1174), Expect = 1.220e-162 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1
Query: 1 MLSCRNPPLGLNRYEYFPEANGFEAPATFAAIRAEVNTYLDSRTVPCLHETVPDIRISSAVGEGGQCWRFLPLKKLGKLDEKHRTHFPALFDLLEQDCIANAIISSLDPGTVIPAHRGYFKGFIRYHLAIEAPTDAPASITCGGIRYEWKTGEGILFDDTFIHSVINPSRSRRTVLYLDIKRRNLPPYVQRMTDAVYAAVAGNKLLQAALADQHKTQSIDE 663
MLSCRNPPLGLNRYEYFPEANGFEAPATFAAIRAEVNTYLDSRTVPCLHETVPDIRISSAVGEGGQCWRFLPLKKLGKLDEKHRTHFPALFDLLEQDCIANAIISSLDPGTVIPAHRGYFKGFIRYHLAIEAPTDAPASITCGGIRYEWKTGEGILFDDTFIHSVINPSRSRRTVLYLDIKRRNLPPYVQRMTDAVYAAVAGNKLLQAALADQHKTQSIDE
Sbjct: 1 MLSCRNPPLGLNRYEYFPEANGFEAPATFAAIRAEVNTYLDSRTVPCLHETVPDIRISSAVGEGGQCWRFLPLKKLGKLDEKHRTHFPALFDLLEQDCIANAIISSLDPGTVIPAHRGYFKGFIRYHLAIEAPTDAPASITCGGIRYEWKTGEGILFDDTFIHSVINPSRSRRTVLYLDIKRRNLPPYVQRMTDAVYAAVAGNKLLQAALADQHKTQSIDE 221
BLAST of jgi.p|Trimin1|167830 vs. uniprot
Match: A0A6C0EFH0_9ZZZZ (Asp_Arg_Hydrox domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0EFH0_9ZZZZ) HSP 1 Score: 140 bits (353), Expect = 1.030e-36 Identity = 78/224 (34.82%), Postives = 110/224 (49.11%), Query Frame = 1
Query: 1 MLSCRNPPLGLNRYEYFPEANGFEAPATFAAIRAEVNTYLDSRTVPCLHETVPDIRISSAVGEGGQ-CWRFLPLKKLGKLDEKHRTHFPALFDLLEQDCIANAIISSLDPGTVIPAHRGYFKGFIRYHLAIEAPTDAPAS--ITCGGIRYEWKTGEGILFDDTFIHSVINPSRSRRTVLYLDIKRRNLPPYVQRMTDAVYAAVAGNKLLQAALADQHKTQSIDE 663
M+ NPP + +FP FE + I+ E Y ++ + C P + + E CWR L LKK G D FP L+ I NA S LDP I H GY+KG++RYHL + P++ I CGG +YEWK G+G+LFDD F+H V NP+ +R VLYLD+KR NL + + + + L+ + +QH S+ E
Sbjct: 114 MIIIDNPPFIKDINSHFPSNELFEN--NYDTIKKEFTNYNTNKQIECFRHNNPLLSNIDTIDENKDYCWRTLYLKKKGITDNNLSKEFPNTIQLINNPQIHNAFFSILDPNVEIKPHIGYYKGYLRYHLGVIIPSEDNLKPYIICGGEKYEWKEGKGVLFDDMFVHYVNNPTNKQRVVLYLDVKRSNLNGITDALVEFGNYYIENSLLINLFIKNQHIQNSLQE 335
BLAST of jgi.p|Trimin1|167830 vs. uniprot
Match: A0A3M0YDL8_9BACT (Aspartyl/asparaginyl beta-hydroxylase domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M0YDL8_9BACT) HSP 1 Score: 130 bits (326), Expect = 2.100e-33 Identity = 83/211 (39.34%), Postives = 115/211 (54.50%), Query Frame = 1
Query: 4 LSCRNPPLGLNRYEYFPEANGFEAPATFAAIRAEVNTYL-DSRTVPCLHETVPDIRISSAVGEGGQCWRFLPLKKLGKLDEKHRTHFPALFDLL-EQDCIANAIISSLDPGTVIPAHRGYFKGFIRYHLAIEAPTDAPASITCGGIRYEWKTGEGILFDDTFIHSVINPSRSRRTVLYLDIKR-RNLPPYVQRMTDAVYAAVAGNKLLQAA 627
L +NPP ++ YEYFP A E F IRAE+ L + VP HE R SA E WR +K GK E + P LL E + A+ S L+ G IP H G+++G RYHLA+ P DAP I GG +Y+WK GE +LFDDT++H V N S+ +R VL+ D+ R ++LP +++ + +Y +A +K LQ A
Sbjct: 39 LFVKNPPF-VDVYEYFPNAKKLEE--HFEEIRAELEEVLKEEDKVPKFHEVDGIQRFISARDEVP--WRTFIIKAYGKWIESNAERVPKTAALLREMPEVTTAMFSILEGGKHIPPHMGFYRGVWRYHLALIVPDDAPCYIIVGGQKYQWKEGESVLFDDTYMHEVWNKSQKKRVVLFCDVFREKSLPAWLRPLNRWLYNLLANSKRLQRA 244
BLAST of jgi.p|Trimin1|167830 vs. uniprot
Match: A0A7C5QXQ6_9BACT (Aspartyl/asparaginyl beta-hydroxylase domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7C5QXQ6_9BACT) HSP 1 Score: 127 bits (320), Expect = 1.190e-32 Identity = 82/212 (38.68%), Postives = 112/212 (52.83%), Query Frame = 1
Query: 4 LSCRNPPLGLNRYEYFPEANGFEAPATFAAIRAEVNTYL-DSRTVPCLHETVPDIRISSAVGEGGQCWRFLPLKKLGKLDEKHRTHFPALFDLLEQ-DCIANAIISSLDPGTVIPAHRGYFKGFIRYHLAIEAPTDAPASITCGGIRYEWKTGEGILFDDTFIHSVINPSRSRRTVLYLDIKR-RNLPPYVQRMTDAVYAAVAGNKLLQAAL 630
L +NPP L+ EYFP+ + + AIR E+ L + + VP HE R SA WR +K GK + + P LL+Q I A+ S LD G IP H G+FKG +RYHL + PTDAP I GGI+Y WK GE +LFDDT++H V N S+ RR VL+ D+ R + LP + ++ +A + L+ AL
Sbjct: 39 LFVKNPPY-LDLEEYFPQHRLLQE--NWEAIRDELLEVLKNEQNVPKFHEIDSIQRFISA--RDNVPWRTFIIKAYGKWSDVNAEKVPLTAGLLKQMPQITTALFSILDGGKHIPPHMGFFKGVLRYHLGLIVPTDAPCYIIVGGIKYNWKEGEDVLFDDTYMHEVHNKSQHRRAVLFCDLYREKGLPRWAHYFNRKIFKILASSNRLKKAL 245
BLAST of jgi.p|Trimin1|167830 vs. uniprot
Match: A0A7C7NPL4_9FLAO (Aspartyl/asparaginyl beta-hydroxylase domain-containing protein n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A7C7NPL4_9FLAO) HSP 1 Score: 110 bits (276), Expect = 5.550e-26 Identity = 64/177 (36.16%), Postives = 92/177 (51.98%), Query Frame = 1
Query: 43 EYFPEANGFEAPATFAAIRAEVNTYLDSRTVPCLHETVPDIRISSAVGEGGQCWRFLPLKKLGKLDEKHRTHFPALFDLLEQ--DCIANAIISSLDPGTVIPAHRGYFKGFIRYHLAIEAPTDAPASITCGGIRYEWKTGEGILFDDTFIHSVINPSRSRRTVLYLDIKRRNLPPYV 567
EYF E+ E + IR E++ L + V + + + +GG WR LK GK +K P LL+Q I++A S L+PG IP H G F+ RYHL ++ P A+IT +Y W+ GEG+LFDDTF+HS N ++ R VL++D+ R +LP V
Sbjct: 68 EYFKESEILED--NWQCIREELDALLSNMNVIPQFDEIDPLEKRLVASDGGIPWRMYGLKIYGKYMKKAMNECPKTIALLKQVEHKISHAFFSILEPGKDIPPHFGPFRSVYRYHLGLKIPKSGGAAITVDDKKYVWREGEGVLFDDTFLHSAKNDTKEIRVVLFIDVYRNDLPKRV 242
BLAST of jgi.p|Trimin1|167830 vs. uniprot
Match: UPI001F1C63BC (aspartyl/asparaginyl beta-hydroxylase domain-containing protein n=1 Tax=Pelomonas sp. P8 TaxID=2906762 RepID=UPI001F1C63BC) HSP 1 Score: 103 bits (257), Expect = 1.610e-23 Identity = 71/193 (36.79%), Postives = 97/193 (50.26%), Query Frame = 1
Query: 85 FAAIRAEVNTYLDSRT-VPCLHETVPDIRISSAVGEGGQCWRFLPLKKLGKLDEKHRTHFPALFDLL-EQDCIANAIISSLDPGTVIPAHRGYFKGFIRYHLAIEAPTDAPASITCGGIRYEWKTGEGILFDDTFIHSVINPSRSRRTVLYLDIKRRNLPPYVQRMTD-----AVYAAVAGNKLLQAALADQH 642
+A IRAE + L R +P H+ SA G W+ L+ LG +R PA L E + A S LDPG IPAH G + G++RYHL + P P I G RYEWK GEG+LFDD++ H VIN + R VL +D+ R P + R+ + + A + G K++Q A D+H
Sbjct: 43 YALIRAECDALLAERVDMPRYHDVNRPATAISATTPGD--WKVFMLELLGHRPGTNRALCPATCAALAEVPGVLQAFFSVLDPGKSIPAHDGPYLGYLRYHLGVRVPRRNPPIIRVAGQRYEWKEGEGVLFDDSWPHEVINEASEPRVVLIVDVPRPL--PLLPRLVNHFVLWGLAAPLYGKKVVQKA--DRH 229
BLAST of jgi.p|Trimin1|167830 vs. uniprot
Match: UPI0012FB798C (aspartyl/asparaginyl beta-hydroxylase domain-containing protein n=1 Tax=Singulisphaera acidiphila TaxID=466153 RepID=UPI0012FB798C) HSP 1 Score: 102 bits (255), Expect = 2.210e-23 Identity = 64/180 (35.56%), Postives = 92/180 (51.11%), Query Frame = 1
Query: 94 IRAEVNTYL-DSRTVPCLHETVPDIRISSAVGEGGQCWRFLPLKKLGKLDEKHRTHFPALFDLLEQ-DCIANAIISSLDPGTVIPAHRGYFKGFIRYHLAIEAPTDAPASITCGGIRYEWKTGEGILFDDTFIHSVINPSRSRRTVLYLDIKRRNLPPYV--QRMTDAVYAAVAGNKLLQ 621
IR E+ L D +P H+ + SAVG+ + W+ L +G+ ++R P LL+Q + A S LD G IPAHRG ++G++RYHL + P P SI Y WK GE ILFDD++ H V N R VL +DI+R P+ R ++V V G ++L+
Sbjct: 37 IREELLALLPDKSQIPRYHDLDQMQKRISAVGDPEKSWKIFYLYIMGEKPAENRAKCPETSRLLDQVPGLFQAFFSILDGGKAIPAHRGPYRGYLRYHLGLVVPETNPPSIRIKDEHYTWKVGESILFDDSWNHEVYNECAGDRVVLIVDIRRPMPLPFALFNRFVESVMRLVYGKQILK 216
BLAST of jgi.p|Trimin1|167830 vs. uniprot
Match: L0DKC7_SINAD (Aspartyl/asparaginyl beta-hydroxylase-like dioxygenase n=3 Tax=Singulisphaera TaxID=466152 RepID=L0DKC7_SINAD) HSP 1 Score: 102 bits (255), Expect = 2.900e-23 Identity = 64/180 (35.56%), Postives = 92/180 (51.11%), Query Frame = 1
Query: 94 IRAEVNTYL-DSRTVPCLHETVPDIRISSAVGEGGQCWRFLPLKKLGKLDEKHRTHFPALFDLLEQ-DCIANAIISSLDPGTVIPAHRGYFKGFIRYHLAIEAPTDAPASITCGGIRYEWKTGEGILFDDTFIHSVINPSRSRRTVLYLDIKRRNLPPYV--QRMTDAVYAAVAGNKLLQ 621
IR E+ L D +P H+ + SAVG+ + W+ L +G+ ++R P LL+Q + A S LD G IPAHRG ++G++RYHL + P P SI Y WK GE ILFDD++ H V N R VL +DI+R P+ R ++V V G ++L+
Sbjct: 49 IREELLALLPDKSQIPRYHDLDQMQKRISAVGDPEKSWKIFYLYIMGEKPAENRAKCPETSRLLDQVPGLFQAFFSILDGGKAIPAHRGPYRGYLRYHLGLVVPETNPPSIRIKDEHYTWKVGESILFDDSWNHEVYNECAGDRVVLIVDIRRPMPLPFALFNRFVESVMRLVYGKQILK 228
BLAST of jgi.p|Trimin1|167830 vs. uniprot
Match: A0A0U5JA17_9BACT (Peptide aspartate b-dioxygenase n=1 Tax=Candidatus Protochlamydia naegleriophila TaxID=389348 RepID=A0A0U5JA17_9BACT) HSP 1 Score: 99.8 bits (247), Expect = 4.720e-22 Identity = 56/157 (35.67%), Postives = 85/157 (54.14%), Query Frame = 1
Query: 85 FAAIRAEVNTYLDSRT-VPCLHETVPDIRISSAVGEGGQCWRFLPLKKLGKLDEKHRTHFPALFDLLEQ-DCIANAIISSLDPGTVIPAHRGYFKGFIRYHLAIEAPTDAPASITCGGIRYEWKTGEGILFDDTFIHSVINPSRSRRTVLYLDIKRR 549
++ I+ E+ L + T +PC HE + + + + + WR L G+ E +R P +L++ I +A+ S L+PG IP H G + G +RYHL + P P + Y WK GE +LFDDT+IH VIN S S R VL++D+KR+
Sbjct: 48 YSIIKEELEGVLKTDTKIPCFHE-IDTTQTFISANQPNKNWRMFELYCYGQKPEANRRLCPKTCAILDKIPSIQHAVFSILEPGKSIPFHMGPYMGILRYHLGLIVPQVNPPYLHVKDKYYTWKEGESVLFDDTWIHQVINDSPSIRVVLFIDVKRK 203
BLAST of jgi.p|Trimin1|167830 vs. uniprot
Match: A0A2V4YB12_9FLAO (Aspartate beta-hydroxylase/beta-hydroxylase n=1 Tax=Winogradskyella epiphytica TaxID=262005 RepID=A0A2V4YB12_9FLAO) HSP 1 Score: 98.6 bits (244), Expect = 1.630e-21 Identity = 63/176 (35.80%), Postives = 85/176 (48.30%), Query Frame = 1
Query: 22 PLGLNRYEYFPEANGFEAPATFAAIRAEVNTYLDSRTVPCLHETVPDIRISSAVGEGGQCWRFLPLKKLGKLDEKHRTHFPALFDLLEQ-DCIANAIISSLDPGTVIPAHRGYFKGFIRYHLAIEAPTDAPASITCGGIRYEWKTGEGILFDDTFIHSVINPSRSRRTVLYLDIKR 546
P+ L+ FPE + E F I+AE + +P HE I S E W+ L G+ + P LLE+ I A S L+PG IPAH G ++G++RYHL I+ P ++P S Y WK EG+LFDDT+ H VIN S R VL +D+ R
Sbjct: 29 PVILDIKRIFPELSLIEE--RFQTIKAEYENVNEHFDIPAYHEIEQRIYAISGRIEQNLKWKVFLLYYSGETIDLANELCPKTCALLEEVPNIYKAFFSVLEPGKSIPAHHGPYRGYLRYHLGIKVPKESPPSFRLKDQIYHWKEKEGLLFDDTWDHEVINKSNEERVVLIIDLLR 202 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167830 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_7029 ID=mRNA_7029|Name=jgi.p|Trimin1|167830|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=666bp|location=Sequence derived from alignment at Contig_54:219519..220184- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTGTCGTGCAGGAACCCACCACTGGGCCTCAACCGATATGAATACTTback to top protein sequence of jgi.p|Trimin1|167830 >Trimin1|167830|e_gw1.54.143.1 ID=Trimin1|167830|e_gw1.54.143.1|Name=jgi.p|Trimin1|167830|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=222bp MLSCRNPPLGLNRYEYFPEANGFEAPATFAAIRAEVNTYLDSRTVPCLHEback to top mRNA from alignment at Contig_54:219519..220184- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_7029 ID=mRNA_7029|Name=jgi.p|Trimin1|167830|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=666bp|location=Sequence derived from alignment at Contig_54:219519..220184- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_54:219519..220184- >mRNA_7029 ID=mRNA_7029|Name=jgi.p|Trimin1|167830|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=666bp|location=Sequence derived from alignment at Contig_54:219519..220184- (Tribonema minus UTEX_B_3156 )back to top |