Trimin1|152835|gw1.54.197.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|152835
Unique Name	Trimin1\|152835\|gw1.54.197.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	124

Homology

[Close]

BLAST of jgi.p|Trimin1|152835 vs. uniprot
Match: A0A836CB25_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB25_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.220e-37
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0

Query:    1 PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIRELGCPMWTD 59
            PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIRELGCPMWTD
Sbjct:    1 PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIRELGCPMWTD 59

[Close]

BLAST of jgi.p|Trimin1|152835 vs. uniprot
Match: A0A835YXV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXV6_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.390e-20
Identity = 44/52 (84.62%), Postives = 46/52 (88.46%), Query Frame = 0

Query:    1 PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIREL 52
            PWGTSTVKLACD GH   A WLIN+NCP DDTVAVSAAAQGSVPLLTR+REL
Sbjct:  268 PWGTSTVKLACDNGHLAIAAWLINHNCPVDDTVAVSAAAQGSVPLLTRLREL 319

[Close]

BLAST of jgi.p|Trimin1|152835 vs. uniprot
Match: A0A836CB53_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB53_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 1.270e-18
Identity = 39/51 (76.47%), Postives = 44/51 (86.27%), Query Frame = 0

Query:    1 PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIRE 51
            PWG+STVK ACD GHH  A WLI+N+CP DDTVAVSAAAQG+VPLL R+RE
Sbjct:   30 PWGSSTVKSACDHGHHGIAEWLIDNDCPVDDTVAVSAAAQGNVPLLRRLRE 80

[Close]

BLAST of jgi.p|Trimin1|152835 vs. uniprot
Match: A0A836CAH4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAH4_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.140e-11
Identity = 30/59 (50.85%), Postives = 32/59 (54.24%), Query Frame = 0

Query:    1 PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIRELGCPMWTD 59
            PWGT TVKLAC+KGH DTAMWL N+NCP                       L CPMWTD
Sbjct:   24 PWGTGTVKLACEKGHRDTAMWLFNHNCP-----------------------LRCPMWTD 59

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|152835 vs. uniprot

BLAST of jgi.p|Trimin1|152835 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A836CB25_9STRA	1.220e-37	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835YXV6_9STRA	1.390e-20	84.62	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CB53_9STRA	1.270e-18	76.47	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CAH4_9STRA	3.140e-11	50.85	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SUPERFAMILY	140860	Pseudo ankyrin repeat-like	coord: 9..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_54	contig	Contig_54:104637..105008 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|152835	mRNA_7009	Tribonema minus UTEX_B_3156	mRNA	Contig_54 104637..105008 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|152835|gw1.54.197.1 ID=Trimin1|152835|gw1.54.197.1|Name=jgi.p|Trimin1|152835|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=124bp
PWGTSTVKLACDKGHHDTAMWLINNNCPADDTVAVSAAAQGSVPLLTRIR
ELGCPMWTDTCAAAARHGHLAALQYLRTQHIPMDELTPAAAARGGHIDVL
QWTFAIECVVDESACEEAARGGQV