Trimin1|350001|estExt_Genemark1.C_Ctg_530085 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|350001
Unique NameTrimin1|350001|estExt_Genemark1.C_Ctg_530085
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1198
Homology
BLAST of jgi.p|Trimin1|350001 vs. uniprot
Match: A0A835YSP0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSP0_9STRA)

HSP 1 Score: 2266 bits (5871), Expect = 0.000e+0
Identity = 1197/1197 (100.00%), Postives = 1197/1197 (100.00%), Query Frame = 0
Query:    1 MDAYPAEVPDKLHPLVAVIASDGPYRFPPRKQGRWLTPDGARVSDSFTPGGILKKRWLDKHSYRSPSVVLHVAKMDLSLSPGSWAQVEAAVVADVQRLAAELAPRDARVMLCLLQQGATTALGRDSHEIVEQRLLSMRRLGVDPHMLTTLAEYDLGLGSMPLRRLGLQLKELAARHYEAAITRLRRQEKLLLSTQSHPRLLPLLARVHFKLGCMSEALGGDDRAVAAFHECARVLGDMMALTKRANADAAALPGTAGEALLRIEQLGMMITKKDAVDSTGLLLEGDHVGQIRGVAEVQHHVLATMLLEHTQRFPMMSGGQANVMHHLLAAASHAVRRRKVAAKLLVDPSFKLSDHATQEYPWVGAGLQLLAPTMGEELLKAQEAGLPHADISAALLKKALALMTDHSSGGALHKALKAWSAVPEALQDSSWNTIAAAVLPRICRCAAACGLDGTGLTAHQAHVIAASAVDAGLRLAGRTLQQLVPPAVRQEALTTALTATFNLAAALSPDPAQQSATALALPCGPLSAAIDGGLEVALGHHHDMIVCAAGFAVGSATAGESVLLHLFVKNFAGQALPVREVQLQFSSPLVGCRIVNASAVPNGEPPAHLSGNYVQCSCLASVDAGAPLGLAKQQFTCNTLSQVLAASTCIRVTLDVRLPSALASQMEPLSVTGVRFMLSPPHLNTPSVTLAVPAREASLLQREVPPDAGLTSQHEEVRVLPPVARAQLGVLSSGDPALVGALTPITLTIASHGDHVEGGHLYLECNPAPASYASSHAFFWQQQXXXXXXXXXXXXXQQPQTPLSPSRAGLRGFEPLPLGSNLQPAKLALTAGMRVRHAAAYTHAVTIWARALSTVPVAISFRLEYGAAGVKGGLPHNSQLLHVLQAQPPLVATAEVISRRMGNDSNSSSTDAERPASDAAAPATAAVPVAHRASLGAVPDASSPLPVFAHEPFEVRLALTTSHSLPLRIKCIELVPPSCAAAAAAAGAPAQLIGAQTILYGAPTDREGHSTPAAAGALLCQNDVISAGARMIMAAPGLSTLGVLRVRWCAEEMPPAMSVSSIQEQQRPPHLPVAGTVITELPLPTADAVEATIMVDQRNPSEAFYGGEFEVVWRITNCTNLHQEVTMQASGGEGFVWSGSGTHAMQLQPGESTEFAHALVPLALGHVALPQTSFTCKSTGNVLLRSQNPSSSIFVVP 1197
            MDAYPAEVPDKLHPLVAVIASDGPYRFPPRKQGRWLTPDGARVSDSFTPGGILKKRWLDKHSYRSPSVVLHVAKMDLSLSPGSWAQVEAAVVADVQRLAAELAPRDARVMLCLLQQGATTALGRDSHEIVEQRLLSMRRLGVDPHMLTTLAEYDLGLGSMPLRRLGLQLKELAARHYEAAITRLRRQEKLLLSTQSHPRLLPLLARVHFKLGCMSEALGGDDRAVAAFHECARVLGDMMALTKRANADAAALPGTAGEALLRIEQLGMMITKKDAVDSTGLLLEGDHVGQIRGVAEVQHHVLATMLLEHTQRFPMMSGGQANVMHHLLAAASHAVRRRKVAAKLLVDPSFKLSDHATQEYPWVGAGLQLLAPTMGEELLKAQEAGLPHADISAALLKKALALMTDHSSGGALHKALKAWSAVPEALQDSSWNTIAAAVLPRICRCAAACGLDGTGLTAHQAHVIAASAVDAGLRLAGRTLQQLVPPAVRQEALTTALTATFNLAAALSPDPAQQSATALALPCGPLSAAIDGGLEVALGHHHDMIVCAAGFAVGSATAGESVLLHLFVKNFAGQALPVREVQLQFSSPLVGCRIVNASAVPNGEPPAHLSGNYVQCSCLASVDAGAPLGLAKQQFTCNTLSQVLAASTCIRVTLDVRLPSALASQMEPLSVTGVRFMLSPPHLNTPSVTLAVPAREASLLQREVPPDAGLTSQHEEVRVLPPVARAQLGVLSSGDPALVGALTPITLTIASHGDHVEGGHLYLECNPAPASYASSHAFFWQQQXXXXXXXXXXXXXQQPQTPLSPSRAGLRGFEPLPLGSNLQPAKLALTAGMRVRHAAAYTHAVTIWARALSTVPVAISFRLEYGAAGVKGGLPHNSQLLHVLQAQPPLVATAEVISRRMGNDSNSSSTDAERPASDAAAPATAAVPVAHRASLGAVPDASSPLPVFAHEPFEVRLALTTSHSLPLRIKCIELVPPSCAAAAAAAGAPAQLIGAQTILYGAPTDREGHSTPAAAGALLCQNDVISAGARMIMAAPGLSTLGVLRVRWCAEEMPPAMSVSSIQEQQRPPHLPVAGTVITELPLPTADAVEATIMVDQRNPSEAFYGGEFEVVWRITNCTNLHQEVTMQASGGEGFVWSGSGTHAMQLQPGESTEFAHALVPLALGHVALPQTSFTCKSTGNVLLRSQNPSSSIFVVP
Sbjct:    1 MDAYPAEVPDKLHPLVAVIASDGPYRFPPRKQGRWLTPDGARVSDSFTPGGILKKRWLDKHSYRSPSVVLHVAKMDLSLSPGSWAQVEAAVVADVQRLAAELAPRDARVMLCLLQQGATTALGRDSHEIVEQRLLSMRRLGVDPHMLTTLAEYDLGLGSMPLRRLGLQLKELAARHYEAAITRLRRQEKLLLSTQSHPRLLPLLARVHFKLGCMSEALGGDDRAVAAFHECARVLGDMMALTKRANADAAALPGTAGEALLRIEQLGMMITKKDAVDSTGLLLEGDHVGQIRGVAEVQHHVLATMLLEHTQRFPMMSGGQANVMHHLLAAASHAVRRRKVAAKLLVDPSFKLSDHATQEYPWVGAGLQLLAPTMGEELLKAQEAGLPHADISAALLKKALALMTDHSSGGALHKALKAWSAVPEALQDSSWNTIAAAVLPRICRCAAACGLDGTGLTAHQAHVIAASAVDAGLRLAGRTLQQLVPPAVRQEALTTALTATFNLAAALSPDPAQQSATALALPCGPLSAAIDGGLEVALGHHHDMIVCAAGFAVGSATAGESVLLHLFVKNFAGQALPVREVQLQFSSPLVGCRIVNASAVPNGEPPAHLSGNYVQCSCLASVDAGAPLGLAKQQFTCNTLSQVLAASTCIRVTLDVRLPSALASQMEPLSVTGVRFMLSPPHLNTPSVTLAVPAREASLLQREVPPDAGLTSQHEEVRVLPPVARAQLGVLSSGDPALVGALTPITLTIASHGDHVEGGHLYLECNPAPASYASSHAFFWQQQXXXXXXXXXXXXXQQPQTPLSPSRAGLRGFEPLPLGSNLQPAKLALTAGMRVRHAAAYTHAVTIWARALSTVPVAISFRLEYGAAGVKGGLPHNSQLLHVLQAQPPLVATAEVISRRMGNDSNSSSTDAERPASDAAAPATAAVPVAHRASLGAVPDASSPLPVFAHEPFEVRLALTTSHSLPLRIKCIELVPPSCAAAAAAAGAPAQLIGAQTILYGAPTDREGHSTPAAAGALLCQNDVISAGARMIMAAPGLSTLGVLRVRWCAEEMPPAMSVSSIQEQQRPPHLPVAGTVITELPLPTADAVEATIMVDQRNPSEAFYGGEFEVVWRITNCTNLHQEVTMQASGGEGFVWSGSGTHAMQLQPGESTEFAHALVPLALGHVALPQTSFTCKSTGNVLLRSQNPSSSIFVVP 1197          
BLAST of jgi.p|Trimin1|350001 vs. uniprot
Match: A0A7S2V3J5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3J5_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 5.170e-9
Identity = 33/99 (33.33%), Postives = 54/99 (54.55%), Query Frame = 0
Query: 1100 PSEAFYGGEFEVVWRITNCTNLHQEVTMQASGGEGFVWSGSGTHAMQLQPGESTEFAHALVPLALGHVALPQTS-FTCKSTGNVLLRSQNPSSSIFVVP 1197
            PS+A  G  F + W + N    H ++ +  +GG  F+W+G     +Q+ PGE  + ++ LVPLA GH+ LPQ   ++ +   +V+  S +    IFV P
Sbjct:    1 PSQAKVGEAFSMCWEVLNRGRYHDQLNLAGAGGGNFLWAGHRHCTLQVAPGELHKVSYTLVPLATGHLELPQFDIYSHRHRAHVVKPSSSAHRHIFVKP 99          
BLAST of jgi.p|Trimin1|350001 vs. uniprot
Match: A0A1Y1I9V9_KLENI (Trafficking protein particle complex subunit 11 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I9V9_KLENI)

HSP 1 Score: 58.9 bits (141), Expect = 6.600e-5
Identity = 55/170 (32.35%), Postives = 73/170 (42.94%), Query Frame = 0
Query: 1036 PGLS-TLGVLRVRWCAEEMPPAMSVSSIQEQQRPPHLPVAGT-------VITELPLPTADAVEATIMVDQRNPSEAFYGGEFEVVWRITNCTNLHQEVTMQASGGEGFVWSGSGTHAMQLQPGESTEFAHALVPLALGHVALPQTSFTCKSTGNVLLRSQNPSSSIFVVP 1197
            PG S +LGVL V W                 QR   +P AGT       V++ LPL       + ++V+   P+ A  G  F V  RITN T L QEV    +    FV  GS    M + P       + LVP+  G + LPQ  F+    G  L  +Q  ++ IFV P
Sbjct:  714 PGESVSLGVLEVTW-----------------QRHVEVP-AGTWDTHPAPVVSVLPLAPVSVEGSHVLVETELPACATLGKPFSVAVRITNATELLQEVAFSVTDSPSFVLGGSHNGQMIVLPRSVKALLYELVPIQAGLLTLPQIKFSTVRHGAKLNPTQG-NAKIFVYP 864          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|350001 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835YSP0_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V3J5_9STRA5.170e-933.33Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1Y1I9V9_KLENI6.600e-532.35Trafficking protein particle complex subunit 11 n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 783..815
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 783..805
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 899..914
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 899..923
NoneNo IPR availablePANTHERPTHR14374FOIE GRAScoord: 19..1197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_53contigContig_53:687756..695736 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|350001mRNA_8213Tribonema minus UTEX_B_3156 mRNAContig_53 687756..695815 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|350001|estExt_Genemark1.C_Ctg_530085 ID=Trimin1|350001|estExt_Genemark1.C_Ctg_530085|Name=jgi.p|Trimin1|350001|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1198bp
MDAYPAEVPDKLHPLVAVIASDGPYRFPPRKQGRWLTPDGARVSDSFTPG
GILKKRWLDKHSYRSPSVVLHVAKMDLSLSPGSWAQVEAAVVADVQRLAA
ELAPRDARVMLCLLQQGATTALGRDSHEIVEQRLLSMRRLGVDPHMLTTL
AEYDLGLGSMPLRRLGLQLKELAARHYEAAITRLRRQEKLLLSTQSHPRL
LPLLARVHFKLGCMSEALGGDDRAVAAFHECARVLGDMMALTKRANADAA
ALPGTAGEALLRIEQLGMMITKKDAVDSTGLLLEGDHVGQIRGVAEVQHH
VLATMLLEHTQRFPMMSGGQANVMHHLLAAASHAVRRRKVAAKLLVDPSF
KLSDHATQEYPWVGAGLQLLAPTMGEELLKAQEAGLPHADISAALLKKAL
ALMTDHSSGGALHKALKAWSAVPEALQDSSWNTIAAAVLPRICRCAAACG
LDGTGLTAHQAHVIAASAVDAGLRLAGRTLQQLVPPAVRQEALTTALTAT
FNLAAALSPDPAQQSATALALPCGPLSAAIDGGLEVALGHHHDMIVCAAG
FAVGSATAGESVLLHLFVKNFAGQALPVREVQLQFSSPLVGCRIVNASAV
PNGEPPAHLSGNYVQCSCLASVDAGAPLGLAKQQFTCNTLSQVLAASTCI
RVTLDVRLPSALASQMEPLSVTGVRFMLSPPHLNTPSVTLAVPAREASLL
QREVPPDAGLTSQHEEVRVLPPVARAQLGVLSSGDPALVGALTPITLTIA
SHGDHVEGGHLYLECNPAPASYASSHAFFWQQQQQQQQQQQQQQRHQQPQ
TPLSPSRAGLRGFEPLPLGSNLQPAKLALTAGMRVRHAAAYTHAVTIWAR
ALSTVPVAISFRLEYGAAGVKGGLPHNSQLLHVLQAQPPLVATAEVISRR
MGNDSNSSSTDAERPASDAAAPATAAVPVAHRASLGAVPDASSPLPVFAH
EPFEVRLALTTSHSLPLRIKCIELVPPSCAAAAAAAGAPAQLIGAQTILY
GAPTDREGHSTPAAAGALLCQNDVISAGARMIMAAPGLSTLGVLRVRWCA
EEMPPAMSVSSIQEQQRPPHLPVAGTVITELPLPTADAVEATIMVDQRNP
SEAFYGGEFEVVWRITNCTNLHQEVTMQASGGEGFVWSGSGTHAMQLQPG
ESTEFAHALVPLALGHVALPQTSFTCKSTGNVLLRSQNPSSSIFVVP*
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