Trimin1|349994|estExt_Genemark1.C_Ctg_530061 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349994
Unique NameTrimin1|349994|estExt_Genemark1.C_Ctg_530061
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length456
Homology
BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: A0A835YQF4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF4_9STRA)

HSP 1 Score: 883 bits (2281), Expect = 0.000e+0
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 0
Query:    1 MALRLVARGARGAAGQASNLLVGRVNGAAACQARLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFEIA 455
            MALRLVARGARGAAGQASNLLVGRVNGAAACQARLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFEIA
Sbjct:    1 MALRLVARGARGAAGQASNLLVGRVNGAAACQARLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFEIA 455          
BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: D7G0B9_ECTSI (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0B9_ECTSI)

HSP 1 Score: 594 bits (1532), Expect = 2.500e-209
Identity = 304/451 (67.41%), Postives = 362/451 (80.27%), Query Frame = 0
Query:    8 RGARGAAGQASNLLVGR---VNGAAACQARLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFEIA 455
            R  RG   + S LL G+     G A  Q R LNVHEYVSM+++  H++  P S MA +PE+AE AC EIM     G    DVVIKAQVLSGGRG GHF+NGF+ GVHMC  P++A+ YA +MLG KLITKQTG  GLPC KVLLMER+YMRREMYLSIMMDR  +GPV+VAC  GGTSIEDLAE +PEL+MK  V I  GLT+ QA KIA+HL+L    P+Y+ G T+LKN+Y MFI++DCTLVE+NPLAETP+GRV+ACDAKLNFDDNA +RQKD F  RDY+QED REVEAAKYDLNYIGLTGNIGCMVNGAGLAM+TMDIIKLKGGDPANFLDVGGGATE QVQKA ELL+AD  V  I++NIFGGIMRCD+IASGV+NA K++G+KKPI++RLQGTNV+QA ++IA+S FKMI++++L+DAAEKAVAVA +   A   G++V  + A
Sbjct:   15 RNPRGLVARNSPLLSGKPISATGGAGQQVRRLNVHEYVSMQIMAEHDIDIPASKMAETPEDAEKACAEIMG----GNAMKDVVIKAQVLSGGRGRGHFDNGFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKTLLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDDAAEKAVAVAEIYSQATKVGIDVELQTA 461          
BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: A0A7S3XRL5_HETAK (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRL5_HETAK)

HSP 1 Score: 522 bits (1344), Expect = 1.140e-181
Identity = 260/409 (63.57%), Postives = 330/409 (80.68%), Query Frame = 0
Query:   47 LGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFEIA 455
            +  + V TP + +AT+P+EAE+  +++ A    G    DVVIKAQVL+GGRGLG F +GFKGGVHMC+ P +A+ YAEKMLGN L+TKQT A G+ C KV LMERVYMRREMYLS+M+DR  +GP++VA   GGTSIED+AE +PEL+   P+ I +GLT+ QA K+A +L +V G+P++ + I ++KNLY MFI+ D T VE+NPLAET  G V+  DAKLNFDDNA FRQK++   RD++QEDPREVEAAK+DLNYIGL+GNIGCMVNGAGLAM+TMDIIKLKGGDPANFLDVGGGATE QVQKA E+L+AD  V +I++NIFGGIMRCDIIA G++NA K +GL KPII+RL+GTNV+QA ++IADS +KM + D+LEDAAEKAV+++ ++ +AN  G+ VSFE A
Sbjct:    1 MAKYGVKTPPAQVATTPDEAESIYQKMTA----GDPNKDVVIKAQVLAGGRGLGTFTSGFKGGVHMCTRPGQAKDYAEKMLGNYLVTKQTTAEGVLCSKVFLMERVYMRREMYLSLMLDRGTQGPLMVASPCGGTSIEDVAEQTPELIFTQPIDIMEGLTDAQASKMATNLGMVEGSPSHSDAIALMKNLYTMFIETDATQVEINPLAETSTGEVMCADAKLNFDDNAEFRQKEVHAYRDFTQEDPREVEAAKFDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEGQVQKAFEILNADPKVSSILVNIFGGIMRCDIIAGGIINAAKEIGLGKPIIIRLEGTNVEQANRLIADSGYKMTVCDDLEDAAEKAVSISNIMAEANKIGVKVSFESA 405          
BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: A0A1Z5K8M0_FISSO (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8M0_FISSO)

HSP 1 Score: 517 bits (1332), Expect = 3.020e-179
Identity = 261/420 (62.14%), Postives = 329/420 (78.33%), Query Frame = 0
Query:   34 RLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFE 453
            R LNVHEYVSM+++ +H + TP   +A++PEEAE      + KPG      DVVIKAQVLSGGRGLGHF++GFKGGVHM +   +AR +A+ MLG +L+TKQ    G+ C+KVLLMER+YMR EMYLSI+MDR  +GP++VA   GGTSIED+A  +PE++   P+ IT GLT+EQA ++A +L L PG+  +   +T++KNLY MFI  DCT VEVNPLAETP G ++ CDAK+NFDDNA FRQ  IF  RD +QEDPREV A++YDLNYIGL GNIGCMVNGAGLAM+TMDII+LKGG PANFLDVGGGA+E QVQKA E+L+AD  V+AI++NIFGGIMRCD+IA+G+LNAVK +G+ KPI++RLQGTNVD+AK +I  S ++MI+ D+LE AAEKAV VA +V  A    ++V FE
Sbjct:   23 RHLNVHEYVSMEIMQAHGIKTPNCSVASTPEEAEQIFVHKLNKPGT--PLQDVVIKAQVLSGGRGLGHFKSGFKGGVHMVTKAGQARDFAKSMLGEELVTKQA-PNGIICNKVLLMERMYMRNEMYLSILMDRASQGPLMVASPRGGTSIEDVAATNPEVIFTQPIDITVGLTDEQAQRMAGNLGLEPGSEGHAQAVTLMKNLYNMFIACDCTQVEVNPLAETPSGDIVVCDAKVNFDDNAEFRQTGIFARRDTTQEDPREVAASEYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGSPANFLDVGGGASEQQVQKAFEILNADPKVKAILVNIFGGIMRCDVIANGILNAVKEIGISKPIVIRLQGTNVDKAKTLIEGSPYRMILADDLEAAAEKAVGVAEIVAQAEKIEVDVKFE 439          
BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: W7TUJ9_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUJ9_9STRA)

HSP 1 Score: 514 bits (1325), Expect = 3.610e-178
Identity = 257/419 (61.34%), Postives = 326/419 (77.80%), Query Frame = 0
Query:   32 QARLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNV 450
            QAR+LNVHEY+SM ++  + + TP   + +S +EAE     ++ K        D V+KAQVLSGGRGLG F+NGFKGGVH+ +T  + +K+ E MLG  L+TKQ+G  G+ C+KVLL+ER+YMRREMYLSIMMDRT +GP++VA   GGTSIED+A  +PE +   P+ I +GL+EE A  IA  + L PGT  +  G  ++K LY+M I  D TLVE+NPLAET DGR++A DAKLNFDDNA +RQK IF +RDY+QEDPREVEA KYDLNYIGL+GNIGCMVNGAGLAM+TMDIIKLKGGDPANFLDVGGGATE QV KA E+L+AD  V+ I++NIFGGIMRCD+IA+G+L+A K +G+KKPI++RLQGTNVD+A+K+I  S F+MI+ D LE+AA KAVA+A +VK A    ++V
Sbjct:   24 QARMLNVHEYISMDIMKGYGIATPTGQVVSSVDEAEHVYVNMLNKG-------DAVVKAQVLSGGRGLGTFKNGFKGGVHLATTLGDVKKFTESMLGQHLVTKQSGPAGIVCNKVLLVERLYMRREMYLSIMMDRTTQGPMIVASPVGGTSIEDVAASNPEKIFTEPIDIMEGLSEEAAAGIATKIGLEPGTATHAAGADLVKRLYKMMIATDATLVEINPLAETNDGRIVAADAKLNFDDNAEYRQKQIFAKRDYTQEDPREVEAHKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVHKAFEILNADPKVKTILVNIFGGIMRCDVIAAGILSAAKQIGMKKPIVIRLQGTNVDEAQKLIQASGFRMIVVDELEEAATKAVAIANIVKQAEDVKIDV 435          
BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: A0A067CEF9_SAPPC (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CEF9_SAPPC)

HSP 1 Score: 513 bits (1321), Expect = 1.140e-177
Identity = 259/423 (61.23%), Postives = 329/423 (77.78%), Query Frame = 0
Query:   32 QARLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFEI 454
            Q R LN+HEY SM+++ S  V  P S+ AT+P EAE A   +      G    DVVIKAQ L+GGRGLGHF+NGFKGGVHMC+ P +A+ +AEKMLG  L+TKQTG  G+   KV LMERVYMRREMY SI+MDR   GPV+VA  +GGTSIED+A  +PEL+ K  V+IT G T EQ +++A ++ L     +   G+ ++ NLY MFI  D TLVE+NPLAETP+G V ACDAK+NFDDNA+FR KDIF +RD +QEDPREVEA+ YDLNYIGL GNIGC+VNGAGLAMATMDII L GG PANFLDVGGGATESQV+KA E+L+AD  V++I++NIFGGIMRCD+IA+GV+ A K++G+KKPI++RLQGTNV++A+++I +S F+MI+ ++L+DAA+KAV +A +V  A    +NVSFE+
Sbjct:   20 QVRRLNLHEYQSMEIMKSFGVAIPASLHATTPAEAEAAYNTLKG----GDATKDVVIKAQALTGGRGLGHFKNGFKGGVHMCTKPEDAKNFAEKMLGETLVTKQTGEKGIEVAKVFLMERVYMRREMYFSILMDRASNGPVLVASPAGGTSIEDVAHATPELIFKEAVNITTGPTSEQLNRLAANMGL--SGESQKRGVELMNNLYNMFIGTDATLVEINPLAETPEGNVYACDAKINFDDNASFRHKDIFAKRDKTQEDPREVEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIISLFGGSPANFLDVGGGATESQVKKAFEILNADPQVKSILVNIFGGIMRCDVIAAGVIAAAKDLGMKKPIVIRLQGTNVEKARQLIENSGFRMIVANDLDDAAQKAVKIADIVAQAEEVHVNVSFEL 436          
BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: B7FXA2_PHATC (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXA2_PHATC)

HSP 1 Score: 512 bits (1319), Expect = 2.740e-177
Identity = 254/420 (60.48%), Postives = 328/420 (78.10%), Query Frame = 0
Query:   34 RLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFE 453
            R LNVHEY+SM+++ +H + TP   +A++PEEAE      + +PG    K D+VIKAQVLSGGRGLG F+NGFKGGVHM + P +AR++A  MLGN+L+TKQ    G+ C+KVLLMER+YMRREMYLSI+MDR  +GP++VA   GGTSIED+A  +PE++   P+ IT+GLT E A ++A +L L  G+  +D  + +++NLY MFI  DCT VEVNPLAETP+G ++ CDAK+NFDDNA FRQ  IF  RD SQED REV+A+KYDLNYIGL G IGCMVNGAGLAM+TMDII+LKGG PANFLDVGGGA E+QVQKA E+L++D+ V+AI++NIFGGIMRCD+IA+G++NA K +G+ KPI++RLQGTNV++AK +I    F+MI+ ++LEDAAEKAV VA +   A    + V FE
Sbjct:   23 RNLNVHEYISMEIMKNHGIQTPECYVASNPEEAENIFLNSLNRPGA--PKKDIVIKAQVLSGGRGLGTFKNGFKGGVHMVTKPGQAREFAAAMLGNELVTKQA-PNGIVCNKVLLMERMYMRREMYLSILMDRGSQGPLLVASPRGGTSIEDVAATNPEVIFTQPIDITEGLTPEGAHRMASNLGLEEGSTGHDKAVILMQNLYSMFIACDCTQVEVNPLAETPEGDIVVCDAKVNFDDNAEFRQSSIFARRDTSQEDVREVDASKYDLNYIGLEGTIGCMVNGAGLAMSTMDIIQLKGGSPANFLDVGGGANETQVQKAFEILNSDSQVKAILVNIFGGIMRCDVIATGIINAAKEIGINKPIVIRLQGTNVNEAKTLIEGCGFRMILAEDLEDAAEKAVGVAEIAAQAEKIQVGVKFE 439          
BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: A0A6T6HZE5_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6HZE5_9STRA)

HSP 1 Score: 511 bits (1317), Expect = 6.330e-177
Identity = 251/420 (59.76%), Postives = 331/420 (78.81%), Query Frame = 0
Query:   34 RLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFE 453
            R LNVHEY+SM+++ +H + TP   +A++P+EAE   + I+ KPG      D VIKAQVLSGGRGLG F+NGFKGGV M + P +A+ +A  MLG +L+TKQ    G+ C+KV LMER+YMRREMYLSI+MDR  +GP++V    GGT+IED+A+ +PE++   P+ I +G+ ++Q +++A +L L  G+P+++N IT++KNLY MF + DCT VEVNPLAETP+G V+ CDAK+NFD NA +RQ  IF +RD++QED REVEA+KYDLNYIGL GNIGCMVNGAGLAM+TMDII+LKGG PANFLDVGGGATE QVQKA E+L+AD  V AI++NIFGGIMRCD+IASG++NA K +G++KPI++RLQGTNV++AK +I    FKMI+ ++LEDAAEKAV VA +V  A+   + V F+
Sbjct:   27 RNLNVHEYLSMELMNAHQIATPAGHVASTPDEAEHIFQNILNKPGE--PLKDAVIKAQVLSGGRGLGTFKNGFKGGVQMVTKPGQAKDFAASMLGEELVTKQA-PNGIICNKVFLMERMYMRREMYLSILMDRASQGPLLVGSPRGGTAIEDIAKSNPEVIFTEPIDIVEGIQQDQCERMATNLGLEAGSPSHENAITLMKNLYSMFTQCDCTQVEVNPLAETPEGDVVVCDAKVNFDSNAEYRQSSIFDKRDFTQEDSREVEASKYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGAPANFLDVGGGATEDQVQKAFEILNADPNVHAILVNIFGGIMRCDVIASGIINAAKEIGIRKPIVIRLQGTNVNEAKTMIEGCGFKMIIAEDLEDAAEKAVGVAEIVAQADKIQVGVKFD 443          
BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: B8BS06_THAPS (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS06_THAPS)

HSP 1 Score: 510 bits (1313), Expect = 9.570e-177
Identity = 255/420 (60.71%), Postives = 323/420 (76.90%), Query Frame = 0
Query:   34 RLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFE 453
            R LNVHEY+SM+++  H + TP + +A SPEEAE     +M K         VVIKAQVLSGGRGLG F+NGFKGGVHM +   +A + A  MLG +L+TKQ    G+ C KVLLMER+YMR EMYLSI+MDR   GP++V    GGTSIED+A  +PEL+   P+ I  GLT E A+++A+++ L  GT ++   +T++ NLY+MF+  DCT VEVNPLAETP+G V+ CDAK+NFDDNA FRQK IF  RD+SQEDPREVEA+KYDLNYIGL GNIGCMVNGAGLAM+TMDII+LKGG PANFLDVGGGA E QVQKA ELL++D+ V+AI++NIFGGIMRCD+IA+G++NA + +G+KKP+++RLQGTNVD A+K+I    F+MI+ ++LEDAAEKAV VA +VK A    + + FE
Sbjct:    5 RNLNVHEYISMEIMNQHGIATPKNFVANSPEEAEHIFTTMMNK--------HVVIKAQVLSGGRGLGTFKNGFKGGVHMVTRKGQAAEMASSMLGQELVTKQA-PNGILCQKVLLMERMYMRNEMYLSILMDRASGGPLLVGSPRGGTSIEDVAHSNPELIFTEPIDINVGLTVEAANRMARNIGLEEGTESHAKAVTLINNLYDMFLGCDCTQVEVNPLAETPEGDVVVCDAKVNFDDNAEFRQKSIFERRDFSQEDPREVEASKYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGSPANFLDVGGGANEKQVQKAFELLNSDDKVQAILVNIFGGIMRCDVIATGIINAAQEIGIKKPLVIRLQGTNVDAARKLIEGCGFRMILAEDLEDAAEKAVGVAEIVKQAQNIKVGLQFE 415          
BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: K3WN63_GLOUD (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WN63_GLOUD)

HSP 1 Score: 509 bits (1310), Expect = 5.140e-176
Identity = 264/424 (62.26%), Postives = 330/424 (77.83%), Query Frame = 0
Query:   32 QARLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGT-PAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFEI 454
            Q R LN+HEY S+ ++    V TP  I AT+P EAE A  +I A    G + T     AQ L+GGRGLG F+NGFKGGVHMC+ P +A+  AEKMLG  L+TKQTGA G+   KV L+ERVYMRREMY SI+MDR  +GPV+VA  +GGTSIED+A  +PEL+    V I KG+T+EQ  ++AK+L +   + P  +    M++NLY +FI  D TLVE+NPLAET DG++ ACDAKLNFDDNA FR K+IF +RD SQEDPREVEAA+YDLNYIGL GNIGC+VNGAGLAMATMDII L GG PANFLDVGGGATESQV+KA E+L+ADN V++I++NIFGGIMRCD+IA+G++ A K++GLKKPI++RLQGTNVD+A+++IA+S FKMIMTD+L+DAAEKAV +A +V  A    +NV+FEI
Sbjct:   23 QVRRLNLHEYQSLDIMKGFGVATPQGIPATTPAEAEAAFNKIKA----GRLLT--CSAAQALTGGRGLGSFKNGFKGGVHMCTKPEQAKSIAEKMLGQTLVTKQTGAKGIEVAKVFLVERVYMRREMYFSILMDRASQGPVIVASPAGGTSIEDVAAATPELIFTEKVDIVKGVTDEQVARLAKNLGVDDSSVPKLEE---MIRNLYNLFIGVDATLVEINPLAETADGQIYACDAKLNFDDNAGFRHKEIFDQRDKSQEDPREVEAAEYDLNYIGLDGNIGCLVNGAGLAMATMDIISLYGGSPANFLDVGGGATESQVKKAFEILNADNQVKSILVNIFGGIMRCDVIAAGIVAAAKDLGLKKPIVIRLQGTNVDKARELIANSGFKMIMTDDLDDAAEKAVKIADIVAQAEKVNINVAFEI 437          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349994 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQF4_9STRA0.000e+0100.00Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
D7G0B9_ECTSI2.500e-20967.41Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A7S3XRL5_HETAK1.140e-18163.57Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A1Z5K8M0_FISSO3.020e-17962.14Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
W7TUJ9_9STRA3.610e-17861.34Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A067CEF9_SAPPC1.140e-17761.23Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
B7FXA2_PHATC2.740e-17760.48Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A6T6HZE5_9STRA6.330e-17759.76Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
B8BS06_THAPS9.570e-17760.71Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
K3WN63_GLOUD5.140e-17662.26Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005809Succinate--CoA synthetase, beta subunitPIRSFPIRSF001554SucCS_betacoord: 36..439
e-value: 8.8E-140
score: 463.6
IPR005809Succinate--CoA synthetase, beta subunitTIGRFAMTIGR01016TIGR01016coord: 37..437
e-value: 3.1E-125
score: 416.0
IPR005809Succinate--CoA synthetase, beta subunitPANTHERPTHR11815SUCCINYL-COA SYNTHETASE BETA CHAINcoord: 28..441
IPR005809Succinate--CoA synthetase, beta subunitHAMAPMF_00558Succ_CoA_betacoord: 36..438
score: 37.677311
IPR013815ATP-grasp fold, subdomain 1GENE3D3.30.1490.20coord: 56..160
e-value: 1.4E-82
score: 278.6
IPR013650ATP-grasp fold, succinyl-CoA synthetase-typePFAMPF08442ATP-grasp_2coord: 37..254
e-value: 1.8E-58
score: 197.5
NoneNo IPR availableGENE3D3.30.470.20coord: 36..286
e-value: 1.4E-82
score: 278.6
NoneNo IPR availablePANTHERPTHR11815:SF10SUCCINATE--COA LIGASE [ADP-FORMING] SUBUNIT BETA, MITOCHONDRIALcoord: 28..441
NoneNo IPR availableSUPERFAMILY56059Glutathione synthetase ATP-binding domain-likecoord: 36..290
IPR016102Succinyl-CoA synthetase-likeGENE3D3.40.50.261coord: 292..440
e-value: 6.4E-54
score: 183.9
IPR016102Succinyl-CoA synthetase-likeSUPERFAMILY52210Succinyl-CoA synthetase domainscoord: 291..437
IPR005811ATP-citrate lyase/succinyl-CoA ligasePFAMPF00549Ligase_CoAcoord: 314..434
e-value: 3.5E-24
score: 85.3
IPR017866Succinyl-CoA synthetase, beta subunit, conserved sitePROSITEPS01217SUCCINYL_COA_LIG_3coord: 309..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_53contigContig_53:462271..471229 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349994mRNA_8187Tribonema minus UTEX_B_3156 mRNAContig_53 462116..471481 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349994|estExt_Genemark1.C_Ctg_530061 ID=Trimin1|349994|estExt_Genemark1.C_Ctg_530061|Name=jgi.p|Trimin1|349994|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=456bp
MALRLVARGARGAAGQASNLLVGRVNGAAACQARLLNVHEYVSMKVLGSH
NVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLG
HFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLME
RVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVS
ITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEV
NPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKY
DLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQV
QKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMR
LQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNV
SFEIA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005809Succ_CoA_synthase_bsu
IPR013815ATP_grasp_subdomain_1
IPR013650ATP-grasp_succ-CoA_synth-type
IPR016102Succinyl-CoA_synth-like
IPR005811CoA_ligase
IPR017866Succ-CoA_synthase_bsu_CS