mRNA_8187 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|349994
Unique NamemRNA_8187
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: A0A835YQF4_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF4_9STRA)

HSP 1 Score: 884 bits (2284), Expect = 0.000e+0
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 3 
Query:  156 MALRLVARGARGAAGQASNLLVGRVNGAAACQARLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFEIA 1520
            MALRLVARGARGAAGQASNLLVGRVNGAAACQARLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFEIA
Sbjct:    1 MALRLVARGARGAAGQASNLLVGRVNGAAACQARLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFEIA 455
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BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: D7G0B9_ECTSI (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0B9_ECTSI)

HSP 1 Score: 595 bits (1533), Expect = 2.640e-207
Identity = 304/451 (67.41%), Postives = 362/451 (80.27%), Query Frame = 3 
Query:  177 RGARGAAGQASNLLVGR---VNGAAACQARLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFEIA 1520
            R  RG   + S LL G+     G A  Q R LNVHEYVSM+++  H++  P S MA +PE+AE AC EIM     G    DVVIKAQVLSGGRG GHF+NGF+ GVHMC  P++A+ YA +MLG KLITKQTG  GLPC KVLLMER+YMRREMYLSIMMDR  +GPV+VAC  GGTSIEDLAE +PEL+MK  V I  GLT+ QA KIA+HL+L    P+Y+ G T+LKN+Y MFI++DCTLVE+NPLAETP+GRV+ACDAKLNFDDNA +RQKD F  RDY+QED REVEAAKYDLNYIGLTGNIGCMVNGAGLAM+TMDIIKLKGGDPANFLDVGGGATE QVQKA ELL+AD  V  I++NIFGGIMRCD+IASGV+NA K++G+KKPI++RLQGTNV+QA ++IA+S FKMI++++L+DAAEKAVAVA +   A   G++V  + A
Sbjct:   15 RNPRGLVARNSPLLSGKPISATGGAGQQVRRLNVHEYVSMQIMAEHDIDIPASKMAETPEDAEKACAEIMG----GNAMKDVVIKAQVLSGGRGRGHFDNGFESGVHMCLKPSDAKHYASEMLGQKLITKQTGEDGLPCDKVLLMERMYMRREMYLSIMMDRGSQGPVIVACPDGGTSIEDLAESNPELIMKEEVDIMTGLTDAQAGKIAEHLKLSSDGPSYEAGKTLLKNMYAMFIERDCTLVEINPLAETPEGRVMACDAKLNFDDNAEWRQKDTFQFRDYTQEDTREVEAAKYDLNYIGLTGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVQKAFELLNADPKVATILVNIFGGIMRCDVIASGVINAAKSIGMKKPIVIRLQGTNVEQANELIANSGFKMIISNDLDDAAEKAVAVAEIYSQATKVGIDVELQTA 461
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BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: A0A7S3XRL5_HETAK (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRL5_HETAK)

HSP 1 Score: 522 bits (1345), Expect = 1.050e-179
Identity = 260/409 (63.57%), Postives = 330/409 (80.68%), Query Frame = 3 
Query:  294 LGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFEIA 1520
            +  + V TP + +AT+P+EAE+  +++ A    G    DVVIKAQVL+GGRGLG F +GFKGGVHMC+ P +A+ YAEKMLGN L+TKQT A G+ C KV LMERVYMRREMYLS+M+DR  +GP++VA   GGTSIED+AE +PEL+   P+ I +GLT+ QA K+A +L +V G+P++ + I ++KNLY MFI+ D T VE+NPLAET  G V+  DAKLNFDDNA FRQK++   RD++QEDPREVEAAK+DLNYIGL+GNIGCMVNGAGLAM+TMDIIKLKGGDPANFLDVGGGATE QVQKA E+L+AD  V +I++NIFGGIMRCDIIA G++NA K +GL KPII+RL+GTNV+QA ++IADS +KM + D+LEDAAEKAV+++ ++ +AN  G+ VSFE A
Sbjct:    1 MAKYGVKTPPAQVATTPDEAESIYQKMTA----GDPNKDVVIKAQVLAGGRGLGTFTSGFKGGVHMCTRPGQAKDYAEKMLGNYLVTKQTTAEGVLCSKVFLMERVYMRREMYLSLMLDRGTQGPLMVASPCGGTSIEDVAEQTPELIFTQPIDIMEGLTDAQASKMATNLGMVEGSPSHSDAIALMKNLYTMFIETDATQVEINPLAETSTGEVMCADAKLNFDDNAEFRQKEVHAYRDFTQEDPREVEAAKFDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEGQVQKAFEILNADPKVSSILVNIFGGIMRCDIIAGGIINAAKEIGLGKPIIIRLEGTNVEQANRLIADSGYKMTVCDDLEDAAEKAVSISNIMAEANKIGVKVSFESA 405
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BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: A0A1Z5K8M0_FISSO (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8M0_FISSO)

HSP 1 Score: 517 bits (1332), Expect = 3.870e-177
Identity = 261/420 (62.14%), Postives = 329/420 (78.33%), Query Frame = 3 
Query:  255 RLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFE 1514
            R LNVHEYVSM+++ +H + TP   +A++PEEAE      + KPG      DVVIKAQVLSGGRGLGHF++GFKGGVHM +   +AR +A+ MLG +L+TKQ    G+ C+KVLLMER+YMR EMYLSI+MDR  +GP++VA   GGTSIED+A  +PE++   P+ IT GLT+EQA ++A +L L PG+  +   +T++KNLY MFI  DCT VEVNPLAETP G ++ CDAK+NFDDNA FRQ  IF  RD +QEDPREV A++YDLNYIGL GNIGCMVNGAGLAM+TMDII+LKGG PANFLDVGGGA+E QVQKA E+L+AD  V+AI++NIFGGIMRCD+IA+G+LNAVK +G+ KPI++RLQGTNVD+AK +I  S ++MI+ D+LE AAEKAV VA +V  A    ++V FE
Sbjct:   23 RHLNVHEYVSMEIMQAHGIKTPNCSVASTPEEAEQIFVHKLNKPGT--PLQDVVIKAQVLSGGRGLGHFKSGFKGGVHMVTKAGQARDFAKSMLGEELVTKQA-PNGIICNKVLLMERMYMRNEMYLSILMDRASQGPLMVASPRGGTSIEDVAATNPEVIFTQPIDITVGLTDEQAQRMAGNLGLEPGSEGHAQAVTLMKNLYNMFIACDCTQVEVNPLAETPSGDIVVCDAKVNFDDNAEFRQTGIFARRDTTQEDPREVAASEYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGSPANFLDVGGGASEQQVQKAFEILNADPKVKAILVNIFGGIMRCDVIANGILNAVKEIGISKPIVIRLQGTNVDKAKTLIEGSPYRMILADDLEAAAEKAVGVAEIVAQAEKIEVDVKFE 439
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BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: W7TUJ9_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUJ9_9STRA)

HSP 1 Score: 514 bits (1325), Expect = 4.600e-176
Identity = 257/419 (61.34%), Postives = 326/419 (77.80%), Query Frame = 3 
Query:  249 QARLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNV 1505
            QAR+LNVHEY+SM ++  + + TP   + +S +EAE     ++ K        D V+KAQVLSGGRGLG F+NGFKGGVH+ +T  + +K+ E MLG  L+TKQ+G  G+ C+KVLL+ER+YMRREMYLSIMMDRT +GP++VA   GGTSIED+A  +PE +   P+ I +GL+EE A  IA  + L PGT  +  G  ++K LY+M I  D TLVE+NPLAET DGR++A DAKLNFDDNA +RQK IF +RDY+QEDPREVEA KYDLNYIGL+GNIGCMVNGAGLAM+TMDIIKLKGGDPANFLDVGGGATE QV KA E+L+AD  V+ I++NIFGGIMRCD+IA+G+L+A K +G+KKPI++RLQGTNVD+A+K+I  S F+MI+ D LE+AA KAVA+A +VK A    ++V
Sbjct:   24 QARMLNVHEYISMDIMKGYGIATPTGQVVSSVDEAEHVYVNMLNKG-------DAVVKAQVLSGGRGLGTFKNGFKGGVHLATTLGDVKKFTESMLGQHLVTKQSGPAGIVCNKVLLVERLYMRREMYLSIMMDRTTQGPMIVASPVGGTSIEDVAASNPEKIFTEPIDIMEGLSEEAAAGIATKIGLEPGTATHAAGADLVKRLYKMMIATDATLVEINPLAETNDGRIVAADAKLNFDDNAEYRQKQIFAKRDYTQEDPREVEAHKYDLNYIGLSGNIGCMVNGAGLAMSTMDIIKLKGGDPANFLDVGGGATEEQVHKAFEILNADPKVKTILVNIFGGIMRCDVIAAGILSAAKQIGMKKPIVIRLQGTNVDEAQKLIQASGFRMIVVDELEEAATKAVAIANIVKQAEDVKIDV 435
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BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: A0A067CEF9_SAPPC (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CEF9_SAPPC)

HSP 1 Score: 513 bits (1321), Expect = 1.450e-175
Identity = 259/423 (61.23%), Postives = 329/423 (77.78%), Query Frame = 3 
Query:  249 QARLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFEI 1517
            Q R LN+HEY SM+++ S  V  P S+ AT+P EAE A   +      G    DVVIKAQ L+GGRGLGHF+NGFKGGVHMC+ P +A+ +AEKMLG  L+TKQTG  G+   KV LMERVYMRREMY SI+MDR   GPV+VA  +GGTSIED+A  +PEL+ K  V+IT G T EQ +++A ++ L     +   G+ ++ NLY MFI  D TLVE+NPLAETP+G V ACDAK+NFDDNA+FR KDIF +RD +QEDPREVEA+ YDLNYIGL GNIGC+VNGAGLAMATMDII L GG PANFLDVGGGATESQV+KA E+L+AD  V++I++NIFGGIMRCD+IA+GV+ A K++G+KKPI++RLQGTNV++A+++I +S F+MI+ ++L+DAA+KAV +A +V  A    +NVSFE+
Sbjct:   20 QVRRLNLHEYQSMEIMKSFGVAIPASLHATTPAEAEAAYNTLKG----GDATKDVVIKAQALTGGRGLGHFKNGFKGGVHMCTKPEDAKNFAEKMLGETLVTKQTGEKGIEVAKVFLMERVYMRREMYFSILMDRASNGPVLVASPAGGTSIEDVAHATPELIFKEAVNITTGPTSEQLNRLAANMGL--SGESQKRGVELMNNLYNMFIGTDATLVEINPLAETPEGNVYACDAKINFDDNASFRHKDIFAKRDKTQEDPREVEASAYDLNYIGLDGNIGCLVNGAGLAMATMDIISLFGGSPANFLDVGGGATESQVKKAFEILNADPQVKSILVNIFGGIMRCDVIAAGVIAAAKDLGMKKPIVIRLQGTNVEKARQLIENSGFRMIVANDLDDAAQKAVKIADIVAQAEEVHVNVSFEL 436
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BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: B7FXA2_PHATC (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FXA2_PHATC)

HSP 1 Score: 512 bits (1319), Expect = 3.470e-175
Identity = 254/420 (60.48%), Postives = 328/420 (78.10%), Query Frame = 3 
Query:  255 RLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFE 1514
            R LNVHEY+SM+++ +H + TP   +A++PEEAE      + +PG    K D+VIKAQVLSGGRGLG F+NGFKGGVHM + P +AR++A  MLGN+L+TKQ    G+ C+KVLLMER+YMRREMYLSI+MDR  +GP++VA   GGTSIED+A  +PE++   P+ IT+GLT E A ++A +L L  G+  +D  + +++NLY MFI  DCT VEVNPLAETP+G ++ CDAK+NFDDNA FRQ  IF  RD SQED REV+A+KYDLNYIGL G IGCMVNGAGLAM+TMDII+LKGG PANFLDVGGGA E+QVQKA E+L++D+ V+AI++NIFGGIMRCD+IA+G++NA K +G+ KPI++RLQGTNV++AK +I    F+MI+ ++LEDAAEKAV VA +   A    + V FE
Sbjct:   23 RNLNVHEYISMEIMKNHGIQTPECYVASNPEEAENIFLNSLNRPGA--PKKDIVIKAQVLSGGRGLGTFKNGFKGGVHMVTKPGQAREFAAAMLGNELVTKQA-PNGIVCNKVLLMERMYMRREMYLSILMDRGSQGPLLVASPRGGTSIEDVAATNPEVIFTQPIDITEGLTPEGAHRMASNLGLEEGSTGHDKAVILMQNLYSMFIACDCTQVEVNPLAETPEGDIVVCDAKVNFDDNAEFRQSSIFARRDTSQEDVREVDASKYDLNYIGLEGTIGCMVNGAGLAMSTMDIIQLKGGSPANFLDVGGGANETQVQKAFEILNSDSQVKAILVNIFGGIMRCDVIATGIINAAKEIGINKPIVIRLQGTNVNEAKTLIEGCGFRMILAEDLEDAAEKAVGVAEIAAQAEKIQVGVKFE 439
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BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: A0A6T6HZE5_9STRA (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6HZE5_9STRA)

HSP 1 Score: 511 bits (1317), Expect = 8.020e-175
Identity = 251/420 (59.76%), Postives = 331/420 (78.81%), Query Frame = 3 
Query:  255 RLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFE 1514
            R LNVHEY+SM+++ +H + TP   +A++P+EAE   + I+ KPG      D VIKAQVLSGGRGLG F+NGFKGGV M + P +A+ +A  MLG +L+TKQ    G+ C+KV LMER+YMRREMYLSI+MDR  +GP++V    GGT+IED+A+ +PE++   P+ I +G+ ++Q +++A +L L  G+P+++N IT++KNLY MF + DCT VEVNPLAETP+G V+ CDAK+NFD NA +RQ  IF +RD++QED REVEA+KYDLNYIGL GNIGCMVNGAGLAM+TMDII+LKGG PANFLDVGGGATE QVQKA E+L+AD  V AI++NIFGGIMRCD+IASG++NA K +G++KPI++RLQGTNV++AK +I    FKMI+ ++LEDAAEKAV VA +V  A+   + V F+
Sbjct:   27 RNLNVHEYLSMELMNAHQIATPAGHVASTPDEAEHIFQNILNKPGE--PLKDAVIKAQVLSGGRGLGTFKNGFKGGVQMVTKPGQAKDFAASMLGEELVTKQA-PNGIICNKVFLMERMYMRREMYLSILMDRASQGPLLVGSPRGGTAIEDIAKSNPEVIFTEPIDIVEGIQQDQCERMATNLGLEAGSPSHENAITLMKNLYSMFTQCDCTQVEVNPLAETPEGDVVVCDAKVNFDSNAEYRQSSIFDKRDFTQEDSREVEASKYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGAPANFLDVGGGATEDQVQKAFEILNADPNVHAILVNIFGGIMRCDVIASGIINAAKEIGIRKPIVIRLQGTNVNEAKTMIEGCGFKMIIAEDLEDAAEKAVGVAEIVAQADKIQVGVKFD 443
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BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: B8BS06_THAPS (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS06_THAPS)

HSP 1 Score: 510 bits (1313), Expect = 1.210e-174
Identity = 255/420 (60.71%), Postives = 323/420 (76.90%), Query Frame = 3 
Query:  255 RLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFE 1514
            R LNVHEY+SM+++  H + TP + +A SPEEAE     +M K         VVIKAQVLSGGRGLG F+NGFKGGVHM +   +A + A  MLG +L+TKQ    G+ C KVLLMER+YMR EMYLSI+MDR   GP++V    GGTSIED+A  +PEL+   P+ I  GLT E A+++A+++ L  GT ++   +T++ NLY+MF+  DCT VEVNPLAETP+G V+ CDAK+NFDDNA FRQK IF  RD+SQEDPREVEA+KYDLNYIGL GNIGCMVNGAGLAM+TMDII+LKGG PANFLDVGGGA E QVQKA ELL++D+ V+AI++NIFGGIMRCD+IA+G++NA + +G+KKP+++RLQGTNVD A+K+I    F+MI+ ++LEDAAEKAV VA +VK A    + + FE
Sbjct:    5 RNLNVHEYISMEIMNQHGIATPKNFVANSPEEAEHIFTTMMNK--------HVVIKAQVLSGGRGLGTFKNGFKGGVHMVTRKGQAAEMASSMLGQELVTKQA-PNGILCQKVLLMERMYMRNEMYLSILMDRASGGPLLVGSPRGGTSIEDVAHSNPELIFTEPIDINVGLTVEAANRMARNIGLEEGTESHAKAVTLINNLYDMFLGCDCTQVEVNPLAETPEGDVVVCDAKVNFDDNAEFRQKSIFERRDFSQEDPREVEASKYDLNYIGLDGNIGCMVNGAGLAMSTMDIIQLKGGSPANFLDVGGGANEKQVQKAFELLNSDDKVQAILVNIFGGIMRCDVIATGIINAAQEIGIKKPLVIRLQGTNVDAARKLIEGCGFRMILAEDLEDAAEKAVGVAEIVKQAQNIKVGLQFE 415
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BLAST of jgi.p|Trimin1|349994 vs. uniprot
Match: K3WN63_GLOUD (Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WN63_GLOUD)

HSP 1 Score: 509 bits (1310), Expect = 6.480e-174
Identity = 264/424 (62.26%), Postives = 330/424 (77.83%), Query Frame = 3 
Query:  249 QARLLNVHEYVSMKVLGSHNVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLGHFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLMERVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVSITKGLTEEQADKIAKHLELVPGT-PAYDNGITMLKNLYEMFIKKDCTLVEVNPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKYDLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQVQKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMRLQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNVSFEI 1517
            Q R LN+HEY S+ ++    V TP  I AT+P EAE A  +I A    G + T     AQ L+GGRGLG F+NGFKGGVHMC+ P +A+  AEKMLG  L+TKQTGA G+   KV L+ERVYMRREMY SI+MDR  +GPV+VA  +GGTSIED+A  +PEL+    V I KG+T+EQ  ++AK+L +   + P  +    M++NLY +FI  D TLVE+NPLAET DG++ ACDAKLNFDDNA FR K+IF +RD SQEDPREVEAA+YDLNYIGL GNIGC+VNGAGLAMATMDII L GG PANFLDVGGGATESQV+KA E+L+ADN V++I++NIFGGIMRCD+IA+G++ A K++GLKKPI++RLQGTNVD+A+++IA+S FKMIMTD+L+DAAEKAV +A +V  A    +NV+FEI
Sbjct:   23 QVRRLNLHEYQSLDIMKGFGVATPQGIPATTPAEAEAAFNKIKA----GRLLT--CSAAQALTGGRGLGSFKNGFKGGVHMCTKPEQAKSIAEKMLGQTLVTKQTGAKGIEVAKVFLVERVYMRREMYFSILMDRASQGPVIVASPAGGTSIEDVAAATPELIFTEKVDIVKGVTDEQVARLAKNLGVDDSSVPKLEE---MIRNLYNLFIGVDATLVEINPLAETADGQIYACDAKLNFDDNAGFRHKEIFDQRDKSQEDPREVEAAEYDLNYIGLDGNIGCLVNGAGLAMATMDIISLYGGSPANFLDVGGGATESQVKKAFEILNADNQVKSILVNIFGGIMRCDVIAAGIVAAAKDLGLKKPIVIRLQGTNVDKARELIANSGFKMIMTDDLDDAAEKAVKIADIVAQAEKVNINVAFEI 437
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349994 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQF4_9STRA0.000e+0100.00Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
D7G0B9_ECTSI2.640e-20767.41Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A7S3XRL5_HETAK1.050e-17963.57Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A1Z5K8M0_FISSO3.870e-17762.14Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
W7TUJ9_9STRA4.600e-17661.34Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A067CEF9_SAPPC1.450e-17561.23Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
B7FXA2_PHATC3.470e-17560.48Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
A0A6T6HZE5_9STRA8.020e-17559.76Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
B8BS06_THAPS1.210e-17460.71Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]
K3WN63_GLOUD6.480e-17462.26Succinate--CoA ligase [ADP-forming] subunit beta, ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_53contigContig_53:462116..471481 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|349994|estExt_Genemark1.C_Ctg_530061
BRITEko00000,ko00001,ko00002,ko01000,ko04147
KEGG rclassRC00004,RC00014
KEGG ReactionR00432,R00727
KEGG ModuleM00009,M00011
KEGG Pathwayko00020,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map01100,map01110,map01120,map01130,map01200
KEGG koko:K01900
EC6.2.1.4,6.2.1.5
Descriptionsuccinate-CoA ligase (ADP-forming) activity
COG categoryC
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0045@1|root,KOG2799@2759|Eukaryota
Evalue4.1e-210
Seed ortholog2880.D7G0B9
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionSuccinate:CoA ligase (ADP-forming)
Ec32 orthologEc-02_001020.1
TranscriptId350316
TrackFilteredModels1
ProteinId349994
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349994gene_8187Tribonema minus UTEX_B_3156 geneContig_53 462116..471481 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8187_1exon_8187_1Tribonema minus UTEX_B_3156 exonContig_53 462116..462318 +
exon_8187_2exon_8187_2Tribonema minus UTEX_B_3156 exonContig_53 462780..462888 +
exon_8187_3exon_8187_3Tribonema minus UTEX_B_3156 exonContig_53 463229..463303 +
exon_8187_4exon_8187_4Tribonema minus UTEX_B_3156 exonContig_53 463607..463647 +
exon_8187_5exon_8187_5Tribonema minus UTEX_B_3156 exonContig_53 463940..464010 +
exon_8187_6exon_8187_6Tribonema minus UTEX_B_3156 exonContig_53 464712..464802 +
exon_8187_7exon_8187_7Tribonema minus UTEX_B_3156 exonContig_53 465482..465730 +
exon_8187_8exon_8187_8Tribonema minus UTEX_B_3156 exonContig_53 466635..466731 +
exon_8187_9exon_8187_9Tribonema minus UTEX_B_3156 exonContig_53 467212..467297 +
exon_8187_10exon_8187_10Tribonema minus UTEX_B_3156 exonContig_53 468125..468200 +
exon_8187_11exon_8187_11Tribonema minus UTEX_B_3156 exonContig_53 468749..468828 +
exon_8187_12exon_8187_12Tribonema minus UTEX_B_3156 exonContig_53 469300..469362 +
exon_8187_13exon_8187_13Tribonema minus UTEX_B_3156 exonContig_53 469715..469875 +
exon_8187_14exon_8187_14Tribonema minus UTEX_B_3156 exonContig_53 470323..470410 +
exon_8187_15exon_8187_15Tribonema minus UTEX_B_3156 exonContig_53 471197..471481 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_8187UTR5_8187Tribonema minus UTEX_B_3156 five_prime_UTRContig_53 462116..462270 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8187CDS_8187Tribonema minus UTEX_B_3156 CDSContig_53 462271..462318 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_8187UTR3_8187Tribonema minus UTEX_B_3156 three_prime_UTRContig_53 471230..471481 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349994Trimin1|349994|estExt_Genemark1.C_Ctg_530061Tribonema minus UTEX_B_3156 polypeptideContig_53 462271..471229 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8187 ID=mRNA_8187|Name=jgi.p|Trimin1|349994|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1775bp|location=Sequence derived from alignment at Contig_53:462116..471481+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGATTGGATACGAGCGGCGAGGCATTTGTACGAGGAAAGTGGACAGCGGC
GCTCTATACTACTGCCGGTATCAGCTGCTGAGGGGAAAGGACTACCAGCC
AGGATACTCCCAGCCGATCAACAGCACGCACGCCAGATTTTGAGATTGTG
AGAAGATGGCCTTACGACTCGTAGCCAGGGGAGCCAGGGGAGCTGCTGGA
CAGGCGAGCAACTTGCTGGTTGGGCGTGTGAATGGAGCTGCAGCTTGCCA
AGCGCGCCTGCTGAACGTTCATGAATATGTGTCCATGAAGGTGCTTGGCA
GCCACAATGTTGGCACTCCGATTTCTATAATGGCGACTTCGCCGGAGGAA
GCGGAGACGGCATGCAAGGAGATCATGGCCAAGCCAGGACCGGGGGGCAT
GAAGACTGATGTTGTCATCAAGGCACAGGTGCTGAGTGGCGGGAGGGGAC
TGGGCCACTTTGAGAATGGATTCAAGGGCGGCGTGCACATGTGTTCGACC
CCTGCTGAGGCGCGCAAGTATGCGGAGAAGATGCTGGGCAACAAGCTCAT
CACCAAGCAGACAGGTGCTGGTGGCCTGCCCTGCCACAAGGTCCTGCTGA
TGGAGCGCGTGTACATGCGTCGCGAGATGTACCTGAGCATCATGATGGAC
AGGACATACAAGGGCCCCGTTGTGGTGGCCTGCGCCAGCGGCGGCACCTC
CATTGAGGACCTTGCAGAGCATAGCCCTGAGCTGGTGATGAAGATGCCAG
TGAGCATCACTAAGGGGCTTACGGAGGAGCAGGCGGACAAGATTGCTAAG
CATTTGGAGCTGGTGCCTGGCACGCCCGCCTACGATAATGGCATCACCAT
GCTCAAGAACCTGTATGAGATGTTCATCAAGAAGGACTGCACCCTGGTGG
AGGTCAACCCCCTGGCAGAGACGCCTGACGGCAGAGTTCTGGCCTGTGAT
GCCAAGCTGAACTTCGATGACAACGCCGCATTCAGACAGAAGGACATATT
TACCGAGCGGGATTACTCCCAGGAGGACCCTCGTGAGGTGGAGGCAGCCA
AGTATGACCTCAACTACATTGGCCTCACTGGCAACATTGGCTGCATGGTG
AATGGCGCCGGCCTGGCAATGGCCACAATGGACATCATCAAGCTCAAGGG
AGGCGACCCAGCCAACTTCCTCGATGTGGGAGGTGGTGCGACCGAGTCGC
AGGTGCAGAAAGCCTTGGAGCTGCTTGACGCCGACAATGGGGTGGAGGCC
ATCATGATCAACATTTTTGGTGGCATCATGCGCTGCGACATCATTGCCAG
CGGCGTGCTGAATGCTGTCAAGAACGTGGGCCTGAAGAAGCCCATCATCA
TGCGCCTGCAGGGGACCAACGTGGACCAGGCCAAGAAGATCATTGCGGAC
AGTGATTTCAAGATGATCATGACAGACAACCTGGAGGATGCGGCTGAGAA
GGCTGTGGCGGTGGCGCGCGTTGTCAAGGATGCCAATGTGGCTGGCCTGA
ATGTGAGCTTTGAGATTGCATAGGCGCAGCCCAAGTCCCAAGAGCGCATT
CCGCAAAGTGTGATATCATGTGCCCTTCAGCGCCAACTTCAATTTTTGAA
CGGGAGAGATAATTTTGGGTCAGTCAGGGCGGCAGCGCGCCCGTAGCAAG
GAAACTGGATGGCACTACTGCTGCACTATCAACAACAGTCATTGGAGATT
GGCTGGGCCATGTGGTAGTGATTTGACCATGGCGTGGTCTGTAGCGCTAC
ACGGCAATGCAATCTATGTACCATC
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protein sequence of jgi.p|Trimin1|349994

>Trimin1|349994|estExt_Genemark1.C_Ctg_530061 ID=Trimin1|349994|estExt_Genemark1.C_Ctg_530061|Name=jgi.p|Trimin1|349994|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=456bp
MALRLVARGARGAAGQASNLLVGRVNGAAACQARLLNVHEYVSMKVLGSH
NVGTPISIMATSPEEAETACKEIMAKPGPGGMKTDVVIKAQVLSGGRGLG
HFENGFKGGVHMCSTPAEARKYAEKMLGNKLITKQTGAGGLPCHKVLLME
RVYMRREMYLSIMMDRTYKGPVVVACASGGTSIEDLAEHSPELVMKMPVS
ITKGLTEEQADKIAKHLELVPGTPAYDNGITMLKNLYEMFIKKDCTLVEV
NPLAETPDGRVLACDAKLNFDDNAAFRQKDIFTERDYSQEDPREVEAAKY
DLNYIGLTGNIGCMVNGAGLAMATMDIIKLKGGDPANFLDVGGGATESQV
QKALELLDADNGVEAIMINIFGGIMRCDIIASGVLNAVKNVGLKKPIIMR
LQGTNVDQAKKIIADSDFKMIMTDNLEDAAEKAVAVARVVKDANVAGLNV
SFEIA*
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mRNA from alignment at Contig_53:462116..471481+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8187 ID=mRNA_8187|Name=jgi.p|Trimin1|349994|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9366bp|location=Sequence derived from alignment at Contig_53:462116..471481+ (Tribonema minus UTEX_B_3156 )
GGATTGGATACGAGCGGCGAGGCATTTGTACGAGGAAAGTGGACAGCGGC
GCTCTATACTACTGCCGGTATCAGCTGCTGAGGGGAAAGGACTACCAGCC
AGGATACTCCCAGCCGATCAACAGCACGCACGCCAGATTTTGAGATTGTG
AGAAGATGGCCTTACGACTCGTAGCCAGGGGAGCCAGGGGAGCTGCTGGA
CAGGTGAATATTACGCAAAGTACCTCATGTCTGAGTGCTCACTAACCAAT
GTTACATCGGCCAGCTGCTCCGAAAAAACGACGAGGATCTCACACTGTGA
TTTCATCGATCTTTGCTGCAAGCCATTCGTGATTGGACAACTTGTATTTG
TTGTCTCTGTCGTAAGTCACACCAGCTCTTGTTACGATTCACTGTCAGGC
TGGTCCTGTCTGATATCACCTAAAGTGAGTTGCAGACTTCCGGCCCAGGT
TTATTGGGGGTAAAATGTACGCTTCGCGGCTGATCTTGTCGCAATGCTCG
CGTGAGGAAGTGGTTTCGCTGCCGCTGCCATGATGCTGCATTCTGCAACT
TCATTTTTCAGCCCTGAAGTCAAACTGTGCGTGCTGAACAAGATTGACAT
GAAGATTTGTGGCACACGCTGCGTCGCTCACGCCTGATCGGCCACCTTTT
GTTGTCTCTGGCAGGCGAGCAACTTGCTGGTTGGGCGTGTGAATGGAGCT
GCAGCTTGCCAAGCGCGCCTGCTGAACGTTCATGAATATGTGTCCATGAA
GGTGCTTGGCAGCCACAATGTTGGTAAGTCAATTTCATTGAAGTTGTTGC
TTGAGGTTGCTGTTGTCGCGCGCTTGCACCGCAATTCTGGTACAAAGTGT
ATACTGGTATTCTGCGATTTATCCTTGGTCACTGTTGTCTGTCACACCTG
CACGTTTGACACAGGCATGGACAATGCTGTTGCGCTGAGCATCCACACCT
TTAAAATGTCTTCAACTTCAACTCAACTCCGTTGGCCAATTATCGATGCA
TCTAGCTCACGATGTTGCTTGGTTGTACCTGTGTTTTCTTATTGGTCTTT
GCAACAATGCCCTTTGAATGGTTGTTCATACTGATGTGGTGCTATGCTGC
CGCTTGGTTGCAGGCACTCCGATTTCTATAATGGCGACTTCGCCGGAGGA
AGCGGAGACGGCATGCAAGGAGATCATGGCCAAGCCAGGTCAGCACTCGC
TGATGCCATCATCAAGTAACTGCTTAGCTTTACATACAAGGTGTTGTAGC
CAAGCAGCAATGCCTGTTCTGCAGTGGTGGAAGCGAGTGTGTGTATGCCA
CGTTGTCTCTTTTGTGACTTAATTGGGCATCACTGCAGCTTTGTTCTTGT
CATGCAGCCCAGCTGTGTGTGACATGCTAAAAATCGTTTGCGCAGCTCGT
GTATATATCTAAAGAATTGCACATTAGCATTTCAGCTACTCAGACGCTTG
CTTACATTTCATTTGCTTGTGTTGATGCCTGGTTGTCGCAGGACCGGGGG
GCATGAAGACTGATGTTGTCATCAAGGCACAGGTCTCGTGCTGTACTTTT
TGCATGTGTTATCATTGTGGGCTCAAGTGCTTGTGAGTTATCAGTTGTGA
CTGTCAGTGCGATAGTGTGCGACGTCACCTCAGGCACAACTTGAAGCACC
AACTCGTGAGTGTCATGTAATATTCAAATAGAAGTTTTGTCGTTGACAAC
AACAGCAACAATTAAAAGGCCTTTCACATGGTGCATTGTGTGCATAGAAA
ATGGCTTGAGCACTGACTGCATTGCTCCTGAAGCTACGTGAAAATATCGA
TTTTATCTCTGTCTGAGTGCGCAGGTGCTGAGTGGCGGGAGGGGACTGGG
CCACTTTGAGAATGGATTCAAGGGCGGCGTGCACATGTGTTCGACGTGAG
TCCATGAATGCTTGTATCATTCATTCATGCGCATGGTCAAGCATTGACAG
CTGCTTGATGCTTGTTGTCATCAATTTGGCTGCCGCCAGCGGCAGAATGT
CAAGATAAGATCTCAGCATCATTCAAGGTACTGGTTAAGTGTCAGCGTGA
AGGGAACCTAAGATTTTTTGGTGGTCCATAGCATCTGGTGGGTGCTTAGT
TGGCTGTGTTGCGCTTATGCACAAAGCACGTACCACTATCACTCTCACCC
AAGTGAATCGCCTTACATTGATTCATCATGCCATAAACAAACAAAAGCAT
ATAGACTGGAAACACCATCACACTCCTTTAGCGGTACTTGACACTTCCAC
ACTAGCGGGCCGCCACAGTGGTGTGCGGAAATGCAAATACCTATGCAGGG
TAAGTATAAGGTCTGCCTTATAACCCACCTGTCATGTGTGGGGTCTGGCT
ATGCGCCCTGATCTGGTGGTGACAGCTTTCGCGATTGATGACTTTCACTA
TGCCAGATTGTGTCACACGCTGCATTTGTCTGAACCATATAGTAATTTGC
CTGTAATTCACCATATTTAGAGTGTCTAGATGATGGCAGACCCGTGCACA
TGAGGCTAGCAGTCAAGTATGGCCGCATCTGACCACCCAGCCCGACACTT
CTGCCCTTCCTGTTGATTCCTGGTACGCTGTCATGAACGTAAACAGCCCT
GCTGAGGCGCGCAAGTATGCGGAGAAGATGCTGGGCAACAAGCTCATCAC
CAAGCAGACAGGTGCTGGTGGCCTGCCCTGCCACAAGGTGAGCGGTCTTC
CGTGGGCTTAAAAAAGTGATGGGTGAAGTTGAAGTTGGACTAAACGCGCT
CAGGTGCCCCCCCCCCCATGTGATGTAGATGTAGTCATGCCTTTTGTTTC
AGTCGCATACACACAGTGTGTCTCTGGGCTGATGATGCTGACGAAGCATG
CCATTCGCGTGCGTACGGGTGTGTCAACGAAGTCCATTTTTTCGTCACAC
ATGCACCTGAGCGTGCTTTGATATACTACATACAGTCACTATGCCTTGGG
CGCAAATTGCGTGCAATGAGGATTTGTGACGTTCAGCTGCTGTGCTTGCT
GATTCAAATGGACGTGGCGGGTAGGCATTGTGTGTGGACATAGATGGAAG
ATGCAGGTATTTCATGTCAGGTTATTGGCGAGGTTGCAGCATGTGCAGGT
GCACCGAGGTTTACCATTGTACTTGTATACTCAACGCCCGAAAAAGGGCA
CACGGATGCAGCCACCGTCATCACCACCTGCCCAAGTCAAGTCACAATCA
GGTCGTGGTTCCCATGTGCTGTATGCATTCGAACCTGCCAATTGCCTCAC
CGCACCCGTCAGGTCCTGCTGATGGAGCGCGTGTACATGCGTCGCTACAA
GTCAAATTGCAAGTCATATAGGCACTTAGCACAACAATCTGTCTGTTGCC
TCACTGCACCCGTTAGGTCCTGCTGATGGAGCGCGTGTACATGCGTCGCG
AGATGTACCTGAGCATCATGATGGACAGGACATACAAGGGCCCCGTTGTG
GTGGCCTGCGCCAGCGGCGGCACCTCCATTGAGGACCTTGCAGAGCATAG
CCCTGAGCTGGTGATGAAGATGCCAGTGAGCATCACTAAGGGGCTTACGG
AGGAGCAGGCGGACAAGATTGCTAAGCATTTGGAGCTGGTGCCTGGCACG
CCCGCCTACGATAATGTGAGTCGTGTATCATATCATTGGCGCGTCTATTG
TATGGCAGTATGTGCTGCTCTGGCCCATCAGCCTGATTTGTGACGGTGCT
GGTGCTCTGTTGTGAGGGGGTGCGCGTACATAAATGGCTGGGCCAGTGCA
GTGCAGGTGGTGGCGATGCGCTGTTGTGAGTGTTGAGGTATATTGGCAGT
GCAGGTGGTGGTGATGCTCCGTTGTCAGTGGGTAGTATGTAGAGGTTTAT
CCAATCGGCAACTGGCTGACAGGCTCTTGCTTGCGGGTGAATGCCACGCG
CGTGTATCTGTCAATGTTGACGTGTTTCTGCTCTTCATGAAATCAATGGC
CATCTTGCAACCGAAAGCATTACAAATGCTGCAACTAAGGAACAGACCGA
CAAGTAAGCTGAGTGCTAGCGGGTTCACCAATCTGTCTCAAATGTCCTAC
GGATCTGCCTCTACATTGGAACATGCCATTGACCTGACTGACCGTTCCTC
GTTGTAGTGATGCAACATCAAGAGCTTGGCAGGCAATACCTGCACATGGT
AGGAGCTGAAGGTTCCAATGCTGATCAGAGACAGTTATTTGAATAGTTGG
CGGGATGAGCATACGGGTAACGCCTGCTCTTGCAAGTTTGTAGTAGTAGT
CAGGTGCATACAAGCAAGATGTCCCAATGGCGCAACGGCATGACATGACA
GCAATGGCTTATGTGCGAACATGGCGGAGCCATCACCGCCAGATTGTAAC
AAGTTTTTGAGTTGCAGCGCAGCTGGATCATGATTGCATTGCCTTGATCA
GTCATCATAACCCTATGTTGCTCGCTCTTGCTGCGTGCACAATGCTGTGA
CCTCCACTGACCTCACTGTTATTGGTGATATCCATGTTGCTGCCTGTGTG
TGAAACTTTCCATGTTTAGGGCATCACCATGCTCAAGAACCTGTATGAGA
TGTTCATCAAGAAGGACTGCACCCTGGTGGAGGTCAACCCCCTGGCAGAG
ACGCCTGACGGCAGAGGTGAGAGAGGGCCTGAGCGCTGTTCAATTGCGCT
GTGTTGGTTGTAGCTGCAGGTTGTCAAGGCAGTCGCCACAACTAGCATGC
AGGCAGCGAAAAGGAGTGATGATGATGATGTTGATGTCATTAGTACACAT
ACAGTACAGAAAATACTCGATGCATAAGACATAATCAGCACAACCAAAAT
TGGCTGCAGCTTAGCAGCTGTTGAAGCAGCAGCATCACTGTGTCAGATAA
AAATTGCTTCTAAGGTCAGCCTGCTCCGCTTCGCGAGGTGTGTGTGAGCA
AATTTGAGTCATGCACATGTGCTCAAGCCAATATGCGCTGCTATATGAAC
ATGTCAGCTCAAGTTTGCTACAAGATGAGTTGACGTTGTCCCTGTTGGTA
CACAGGCTTAATCATTGATTGTGCGGTATACAGCATTGTCATGGTCAGTG
CTGCTCAAATGCTCAAATGCCCTTGGTTGCACTTGCGCTGCTGCAGTTCT
GGCCTGTGATGCCAAGCTGAACTTCGATGACAACGCCGCATTCAGACAGA
AGGACATATTTACCGAGCGGGATTACTCCCAGGTATGTGGGCACACACAC
ACACACACACACACAACACCATTGCCACATTATTGTTGCAGTATGCATGG
TTGACTTCGAGCAGGAGCAGCGGTACACAAGGCATCTTCTGGTTACCATC
CGTTTCAGCATGTCTGCAGCTCTGCTTCATGACTGACGTTGCATTGCACG
TGACCACATGACTGCGGCAACGCCCATGTCACATCGCAGACAGCGTGTAT
GTGCTGTTTTATGCTGTTGCGGGCAGTGACGGGCGTTGTTGACGTCAGGG
TAATCTTCATGGAATGCATGGCTTCTGTTACCATTTATGCTGTACATCGA
GCTGCGTGTATCTTCAAGCTGACTGCAGGCCTCCGGAGCATGACCTGCCT
GCAGCAGTGCATGCCATTTGACGAGCAAAAGTTGCATCAGCCGACGCGAA
GCAGTGTGTGCCAGTCTTCACAAGTTGTGACATATCTATGTCATGTCGTC
ACGTACACAACTACTCTTTTTTGAACAAATCCTAATTTGTTGCGATCACT
TGCAACAGTGTTATTTGTCAACACTTCTGTATTCTGAGCAATAATCATGA
CTGTCTCAAAAAGCTGGACCTAGGCCGGACTGACGTCATACTGTCTCATG
TCAATTGCTACACCCAAGTTGTGCGGTTTTGTCATTCCAGGTTGATTGGC
GTAGCCAGGCACCGGGCGCTGTTAGCCAGGATGGATGCTTTTCCGTATAT
CAACGGTTCAAACAGACCATAAGTGCTGCAAATTATTGTGCGCACTGCTT
CAGACTCTGATCAACTTCTCACGCTGTCCTTGTAATTTTGCATTGTCCGG
CATCTATAGGAGGACCCTCGTGAGGTGGAGGCAGCCAAGTATGACCTCAA
CTACATTGGCCTCACTGGCAACATTGGCTGCATGGGTACGTTTGCTGTTG
TTGTGACGAAGCACGGGTGCATGAATGGCGTTGTTGCGGTGGTGACTATT
GATGCTAGTTTGGCGCAATACCTCGCTTCAGTGATTGTAATTGCTGAACA
TGTGCTGTCCTGTCAAGGTATTGCAAGGTCACACATGGCTAACAGTGGCC
ATGAATGACCTGATACACAGGGTTCCGATACATTGCCGCAAAGTCTCGTT
GTACCTGTTCAAACATGACGTAACCGTCTCTGCAGACACGCCACAAGGAT
AGTAAATGTCGAAGTTCATTGCTCAATTGTACCCCCATTGACGTTGTGGC
CCTGGCTGTTGCCGCTGGTATGCATGAGAGCGGTGATTATGTTGGGTGTC
TGCATTGGTGGATCACTCTGTACTGCACACTGTGCACCGCTCATTAGCAG
CTCAGGCATGAGCGACAGGCCCGCTTGCGTAGTGTAATTCCCCATATAGT
CTGCGTGTCTGCACCCCACAACCGGCATTTCAATGCACCTGAGCATTCTG
ATGCTGACTGTTGTCAATCGGCTCTTGTCACAGTGAATGGCGCCGGCCTG
GCAATGGCCACAATGGACATCATCAAGCTCAAGGGAGGCGACCCAGCCAA
CTTCCTCGATGTGGTGAGTTACGTGTCATGGCATTACACCGTGTGTCATC
AGCAGGAGACACGCTGCAAGCAAAAGGCGCTGGGGTTGTATGCATGTCTA
CACTGCAGTGTAGGCAGGAACGGTCAATCACTATGGTAGCAGTGGCGATG
CACCAGTCACTGCCACCAATGGCTGTGCACCTTGGTAATATGCATGGTTA
TTTTCAATTTCATTGCAATGCGCATTTTAGTAGGATATAGACCTGCCTGC
GCGTCAGCAAGCATTGCCAGCTGTTGAAGCATCACATCACAATCGCACTG
TGCGCAATCTCTGGGCCAGGGTACTCTTCAGCTATTCTCCATGTGCCTTG
CGGTGTTGATAAGCTTGATAGCAATGATGGCAAAGGGCACTGTTCGGCAG
ACCTTGATGGTTGATGATCGAACATCTGTTCTGATTCATCCTCCGCTGTG
GTGCTGGTGATGTCGCTCCCGGGTCCTTTTTCAGGGAGGTGGTGCGACCG
AGTCGCAGGTGCAGAAAGCCTTGGAGCTGCTTGACGCCGACAATGGGGTA
AGTATGGGTATACGTGGTCTGCGCTAAATGCAGTCGAGTGGTTGTAACGC
CAGATCTTGCGGTCAAACTCAAGTCACTTGTCGACATGGTTTACTTGCCC
CATGTGGTGAAGAAATAGGAGTGAAGTATTCAACAACTATGTCGTGAACG
ACACACAGTTGATCGTCAGAAAAGTTGAGCGGCTGTTCCCATGCAGCCAC
AGCCCATACAATGATTGCGTCGCCTGTCTCGCATGTCTGCAGCATCACAC
CCGCAACGTTTGGCGCATGTACATCATGCGACACCCCCCTCAAACCATAA
GCGTAATGCACGCATCCTCGCTCATGGCACCTGTGGCATCTTGATTCAGG
TGGAGGCCATCATGATCAACATTTTTGGTGGCATCATGCGCTGCGACATC
ATTGCCAGCGGCGTGCTGAATGCTGTCAAGAACGTGGGCCTGAAGAAGCC
CATCATCATGCGCCTGCAGGGGACCAACGTGGACCAGGCCAAGAAGATCA
TTGCGGACAGGCAAGTGCACACTTGAAGTACATACTGTAACGACCTTTCT
CTTAGACGGCTGTGATGGAAGGGGGTTTGTGAGCCCAGGTGCCACTGTGT
CTATGCATGGCGGGTGCGCAGGGTTGCATGCAATGTTGATACTGTGTGTA
GCCAGGCACGCCGCACAGGTGCGTCGTCGTGTGGCACGAGCAGGAGAGTC
TTGAATGTCACGTCATTGCCTGCATCTTGAGGCGGATTCTGGATGGACAG
GCTTGCTGTATATGCGGAGCATGTGATCAACATATATTCAACATAGTGAC
CTGTCGTGAACTCACTGTGTTTCTGAGGCATAAAGCATCCAATCATGATA
GCGCAACGCGGCCCTCAACAGTCAAGAGACTTCACGCCACATCAGCTGTT
GCAAGTTCCTGAACTGCCTGTACGGCATCGCTGTCCACCTTCTCCCCCAC
CTTGCAGTGATTTCAAGATGATCATGACAGACAACCTGGAGGATGCGGCT
GAGAAGGCTGTGGCGGTGGCGCGCGTTGTCAAGGATGCCAATGTGGTACG
TATCACTTTGTGAACCCACTCTCACAGTAGCTGCGGATAGTGTCTGTAAC
TGCCTGTAACTCCAGCACACTGTGGCAAGGCAGCTCTGATTGCCACGATG
CCCTAGCCAGCTCAAAAGGATGCATGCCCTTAACCGTGCACCGTTGTGCA
GTGCGCACAGGTCCACCTCTAATGTCGGTCACAGCAGCAGCTTTACAAAG
TGATGCTGAAAGAGAACTTGGGCATGCATGCTTGCGTTAATCTACTCGCG
TGAACCGCACATGTCATTTTAAAGCAGGCTTACGTGTGAATTACAACGAC
GAAGTTTTCTGACTGTCCCTGACATGTCATGTGACGACAGCTGCGAGTAC
TTGTGGTGGCGCATACATCATTCTGCCGTGCATTGCCACAGAAGTGCCCC
ATCTGTGAAGTTTTTAAGCTCTGCAAGCCTCCATACATTGAAAAAAGTGA
AGTAGGCATTGTTGCTGTCTGCGACGGATTCATTCCATCATTCACCAACA
AGGTCCTCACCATTGGTACAGGAGCAGCACTTGAAGTTGAGAAGTCGTCT
TTAAAGCTGGAAATCACATGATGTTGAAAAGCATCAGTCTAAGCATCCGC
ACAGGCCCGGTAAGCTTGCATGTTCCTTCATTGCGACTTGAACATGATGT
GCAATACAGCACTGTCAGAACTACTATCGAAACGCCAGTGTCGTAATAGC
CACATGAGAGAGTGCTGGGAATGAAGTGCAGCAGTGCCTCACCACTTGCC
ACCTTTTGTCGCCTTCCCTTTGCCGCCACAGGCTGGCCTGAATGTGAGCT
TTGAGATTGCATAGGCGCAGCCCAAGTCCCAAGAGCGCATTCCGCAAAGT
GTGATATCATGTGCCCTTCAGCGCCAACTTCAATTTTTGAACGGGAGAGA
TAATTTTGGGTCAGTCAGGGCGGCAGCGCGCCCGTAGCAAGGAAACTGGA
TGGCACTACTGCTGCACTATCAACAACAGTCATTGGAGATTGGCTGGGCC
ATGTGGTAGTGATTTGACCATGGCGTGGTCTGTAGCGCTACACGGCAATG
CAATCTATGTACCATC
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Coding sequence (CDS) from alignment at Contig_53:462116..471481+

>mRNA_8187 ID=mRNA_8187|Name=jgi.p|Trimin1|349994|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1368bp|location=Sequence derived from alignment at Contig_53:462116..471481+ (Tribonema minus UTEX_B_3156 )
ATGGCCTTACGACTCGTAGCCAGGGGAGCCAGGGGAGCTGCTGGACAGGC
GAGCAACTTGCTGGTTGGGCGTGTGAATGGAGCTGCAGCTTGCCAAGCGC
GCCTGCTGAACGTTCATGAATATGTGTCCATGAAGGTGCTTGGCAGCCAC
AATGTTGGCACTCCGATTTCTATAATGGCGACTTCGCCGGAGGAAGCGGA
GACGGCATGCAAGGAGATCATGGCCAAGCCAGGACCGGGGGGCATGAAGA
CTGATGTTGTCATCAAGGCACAGGTGCTGAGTGGCGGGAGGGGACTGGGC
CACTTTGAGAATGGATTCAAGGGCGGCGTGCACATGTGTTCGACCCCTGC
TGAGGCGCGCAAGTATGCGGAGAAGATGCTGGGCAACAAGCTCATCACCA
AGCAGACAGGTGCTGGTGGCCTGCCCTGCCACAAGGTCCTGCTGATGGAG
CGCGTGTACATGCGTCGCGAGATGTACCTGAGCATCATGATGGACAGGAC
ATACAAGGGCCCCGTTGTGGTGGCCTGCGCCAGCGGCGGCACCTCCATTG
AGGACCTTGCAGAGCATAGCCCTGAGCTGGTGATGAAGATGCCAGTGAGC
ATCACTAAGGGGCTTACGGAGGAGCAGGCGGACAAGATTGCTAAGCATTT
GGAGCTGGTGCCTGGCACGCCCGCCTACGATAATGGCATCACCATGCTCA
AGAACCTGTATGAGATGTTCATCAAGAAGGACTGCACCCTGGTGGAGGTC
AACCCCCTGGCAGAGACGCCTGACGGCAGAGTTCTGGCCTGTGATGCCAA
GCTGAACTTCGATGACAACGCCGCATTCAGACAGAAGGACATATTTACCG
AGCGGGATTACTCCCAGGAGGACCCTCGTGAGGTGGAGGCAGCCAAGTAT
GACCTCAACTACATTGGCCTCACTGGCAACATTGGCTGCATGGTGAATGG
CGCCGGCCTGGCAATGGCCACAATGGACATCATCAAGCTCAAGGGAGGCG
ACCCAGCCAACTTCCTCGATGTGGGAGGTGGTGCGACCGAGTCGCAGGTG
CAGAAAGCCTTGGAGCTGCTTGACGCCGACAATGGGGTGGAGGCCATCAT
GATCAACATTTTTGGTGGCATCATGCGCTGCGACATCATTGCCAGCGGCG
TGCTGAATGCTGTCAAGAACGTGGGCCTGAAGAAGCCCATCATCATGCGC
CTGCAGGGGACCAACGTGGACCAGGCCAAGAAGATCATTGCGGACAGTGA
TTTCAAGATGATCATGACAGACAACCTGGAGGATGCGGCTGAGAAGGCTG
TGGCGGTGGCGCGCGTTGTCAAGGATGCCAATGTGGCTGGCCTGAATGTG
AGCTTTGAGATTGCATAG
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