mRNA_8161 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|167807
Unique NamemRNA_8161
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|167807 vs. uniprot
Match: A0A835YY51_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY51_9STRA)

HSP 1 Score: 816 bits (2108), Expect = 1.420e-298
Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 1 
Query:    1 MRLDDGLLEVYLVLFPLACSTGDSHACALLDDSTVKCWGSGYNGQLGQGSSGSSAADLSSPPRSAINLGSGRTAKAIATGVAHTCALLDVSTVKCWGSNDFGQLGQGTSGNSDSSTXXXXDADLSTPPRSAVNLGSSRTAKAIAAGAHHTCALLDDSTVKCWGSGYSGQLGQGESDSSAQLNSPPRRAINLGSGRTAKAIAAGDTHTCALLDDSTVKCWGEGEYGQLGQGNYVLLTSPASTAINLGPGRKAKAIAAGGHNTCVLLDDFTVKCWGEGKYGQLGQGRKTDLFLPPISAINLGPGRTAKAIATSGHHMCAILDDSTVKCWGEGDYGEFGLGNNAELSSPPIRVVDLGSGRTATAISAGYIFTCALLDDSTIKCLGHGARGQLGQGSTANVGDKPHEMASLPAIVL 1236
            MRLDDGLLEVYLVLFPLACSTGDSHACALLDDSTVKCWGSGYNGQLGQGSSGSSAADLSSPPRSAINLGSGRTAKAIATGVAHTCALLDVSTVKCWGSNDFGQLGQGTSGNSDSSTXXXXDADLSTPPRSAVNLGSSRTAKAIAAGAHHTCALLDDSTVKCWGSGYSGQLGQGESDSSAQLNSPPRRAINLGSGRTAKAIAAGDTHTCALLDDSTVKCWGEGEYGQLGQGNYVLLTSPASTAINLGPGRKAKAIAAGGHNTCVLLDDFTVKCWGEGKYGQLGQGRKTDLFLPPISAINLGPGRTAKAIATSGHHMCAILDDSTVKCWGEGDYGEFGLGNNAELSSPPIRVVDLGSGRTATAISAGYIFTCALLDDSTIKCLGHGARGQLGQGSTANVGDKPHEMASLPAIVL
Sbjct:    1 MRLDDGLLEVYLVLFPLACSTGDSHACALLDDSTVKCWGSGYNGQLGQGSSGSSAADLSSPPRSAINLGSGRTAKAIATGVAHTCALLDVSTVKCWGSNDFGQLGQGTSGNSDSSTXXXXDADLSTPPRSAVNLGSSRTAKAIAAGAHHTCALLDDSTVKCWGSGYSGQLGQGESDSSAQLNSPPRRAINLGSGRTAKAIAAGDTHTCALLDDSTVKCWGEGEYGQLGQGNYVLLTSPASTAINLGPGRKAKAIAAGGHNTCVLLDDFTVKCWGEGKYGQLGQGRKTDLFLPPISAINLGPGRTAKAIATSGHHMCAILDDSTVKCWGEGDYGEFGLGNNAELSSPPIRVVDLGSGRTATAISAGYIFTCALLDDSTIKCLGHGARGQLGQGSTANVGDKPHEMASLPAIVL 412
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BLAST of jgi.p|Trimin1|167807 vs. uniprot
Match: A0A835ZEC2_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC2_9STRA)

HSP 1 Score: 467 bits (1202), Expect = 3.020e-161
Identity = 248/393 (63.10%), Postives = 284/393 (72.26%), Query Frame = 1 
Query:   61 TGDSHACALLDDSTVKCWGSGYNGQLGQGSSGSSAADLSSPPRSAINLGSGRTAKAIATGVAHTCALLDVSTVKCWGSNDFGQLGQGTSGNSDSSTXXXXDADLSTPPRSAVNLGSSRTAKAIAAGAHHTCALLDDSTVKCWGSGYSGQLGQGESDSSAQLNSPPRRAINLGSGRTAKAIAAGDTHTCALLDDSTVKCWGEGEYGQLGQGNYVLLTSPASTAINLGPGRKAKAIAAGGHNTCVLLDDFTVKCWGEGKYGQLGQGRKTD-LFLPPISAINLGPGRTAKAIATSGHHMCAILDDSTVKCWGEGDYGEFGLGNNAELSSPPIRVVDLGSGRTATAISAGYIFTCALLDDSTIKCLGHGARGQLGQGSTANVGDKPHEMASLPAIVL 1236
            +G +  CA+L+DSTVKCWG G  GQLGQGS      DL SPPRS +NLG GRTA+AIA G+  TC LL   TVKCWG  D G+LGQG++             DLS+PP SA NLG  R AKAIA G  HTCALLDD+T+KCWG G  GQLGQG +     L+SPP  AINLG GRTAKAIA G  HTCALLD STVKCWG G  GQLG  ++  L+SPA+ AINLG GR AKAIA G   TC +LDD TVKCWG G YGQLGQG   D +  PP+SAINLG GRTAKAIAT  +H CA+LDDSTVKCWG+GD+G+ G G+ A LSSPP+  + LGS RTA AI+AG   TCALLDDST+KC G G   QLGQGSTAN+GD+P EMASL AI++
Sbjct:    3 SGGTDTCAILNDSTVKCWGHGAWGQLGQGS----LEDLLSPPRSVVNLGLGRTARAIAIGLEDTCTLLVDFTVKCWGKGDHGRLGQGST------------TDLSSPPSSATNLGPGRKAKAIATGEEHTCALLDDATIKCWGGGAEGQLGQGNT---TDLSSPPSSAINLGLGRTAKAIATGGYHTCALLDHSTVKCWGYGASGQLGLHSHDSLSSPANEAINLGLGRMAKAIATGTIFTCAILDDATVKCWGYGYYGQLGQGSTPDDVSSPPVSAINLGLGRTAKAIATGYNHTCALLDDSTVKCWGKGDFGQLGQGSTAHLSSPPVSAIHLGSNRTAKAIAAGAEHTCALLDDSTVKCWGFGFFSQLGQGSTANLGDQPTEMASLAAIII 376
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BLAST of jgi.p|Trimin1|167807 vs. uniprot
Match: A0A7Z9UFE8_9BACT (Big_5 domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7Z9UFE8_9BACT)

HSP 1 Score: 325 bits (833), Expect = 8.730e-102
Identity = 190/426 (44.60%), Postives = 260/426 (61.03%), Query Frame = 1 
Query:   37 VLFPLACSTGDSHACALLDDSTVKCWGSGYNGQLGQGSSGSSAADLSSPPRS---AINLGSGRTAKAIATGVAHTCALLDVSTVKCWGSNDFGQLGQGTSGNSDSSTXXXXDADLSTPPRSAVNLGSSRTAKAIAAGAHHTCALLDDSTVKCWGSGYSGQLGQGES----DSSAQLNSPPRRAINLGSGRTAKAIAAGDTHTCALLDDSTVKCWGEGEYGQLGQGNYVLLTSPASTAINLGPGRKAKAIAAGGHNTCVLLDDFTVKCWGEGKYGQLGQGRKTDLFLPPISAI---------NLGPGRTAKAIATSGHHMCAILDDSTVKCWGEGDYGEFGLGNNAELSSPP---------IRVVDLGSGRTATAISAGYIFTCALLDDSTIKCLGHGARGQLGQGSTANVGDKPHEMA-SLPAIVL 1236
            + FP   + G +H+C +LD+ +VKCWG    GQLG G++ S+  D SS        ++LG+GRTAKAIA G  HTCA+LD +++KCWG+N  GQLG G + N    +    D         A++LGS RTA AI AG  HTCA+LD++++KCWG+  SGQLG G++    D S+++      A++LGSGRTAK I AG +HTC +LDDS++KCWGE + GQLG GN     S  ++ +++G G  AKAIAAG  +TCV+L++  +KCWG    GQ+G  +  D      + +         N+G GRTA AIA   +H CAILD+S++KCWG    G+ G+G+     +           + VVDLGSGRTA  I AG   TCA+LD+++IKC G    G+LG G T N GD   EM  +LP I L
Sbjct:  248 ITFPT--TAGSAHSCYMLDNGSVKCWGKNNLGQLGLGNT-SNRGDNSSEMGDNLPVVDLGTGRTAKAIAAGDYHTCAILDNASIKCWGANASGQLGIGDTNNRGDESSEMGDI------LPAIDLGSGRTATAITAGNQHTCAILDNASIKCWGANASGQLGIGDTSNRGDESSEMGDT-LPAVDLGSGRTAKVIVAGGSHTCTILDDSSIKCWGENDQGQLGLGNTT--DSLNASVVDMGSGITAKAIAAGESHTCVILNNSAIKCWGRANEGQMGLYKWNDNIGDEPNEMGVTGQDDLTNIGTGRTAAAIAAGKNHNCAILDNSSIKCWGANTSGQLGIGDTVNRGATTDGSDQMGDNLPVVDLGSGRTARGIIAGDNQTCAILDNASIKCWGSNISGELGIGDTENRGDNSSEMGDNLPIISL 661
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BLAST of jgi.p|Trimin1|167807 vs. uniprot
Match: A0A2E8V2I0_9EURY (Uncharacterized protein (Fragment) n=1 Tax=Euryarchaeota archaeon TaxID=2026739 RepID=A0A2E8V2I0_9EURY)

HSP 1 Score: 334 bits (857), Expect = 9.590e-102
Identity = 177/377 (46.95%), Postives = 238/377 (63.13%), Query Frame = 1 
Query:   58 STGDSHACALLDDSTVKCWGSGYNGQLGQGSSGSSAADLSSPPRSAINLGSGRTAKAIATGVAHTCALLDVSTVKCWGSNDFGQLGQGTSGNSDSSTXXXXDADLSTPPRSAVNLGSSRTAKAIAAGAHHTCALLDDSTVKCWGSGYSGQLGQGESDSSAQLNSPPRRAINLGSGRTAKAIAAGDTHTCALLDDSTVKCWGEGEYGQLGQGNYVLLT-SPASTAINLGPGRKAKAIAAGGHNTCVLLDDFTVKCWGEGKYGQLGQGRKTDLFLPPISAINLGPGRTAKAIATSGHHMCAILDDSTVKCWGEGDYGEFGLGNN-AELSSPPIRVVDLGSGRTATAISAGYIFTCALLDDSTIKCLGHGARGQLGQGST 1182
            +TG  H CA+LD+  +KCWG    GQLG G  G S A L++PP +AI+LG+GRTA A++    HTCA+LD   +KCWG ND+GQLG G S               ++P  + VNLGS RTA A++   ++TCA+LD+  +KCWG    GQLG G S+    LN+P   AI+LGSGRTA A+++G  HTCA+LD+  +KCWG    GQLG G     T  P+ST +NLG GR A A++AG  +TC +LD+  +KCWGE   GQLG G   +   P  + +NLG GRTA A+    +H CAILD+ ++KCWG   +G+ G G + A  ++P    V+LGSGRTA A+S+ Y  TCA+LD+   +C G    GQLG G +
Sbjct:  588 ATGYDHTCAILDNGDLKCWGRNSYGQLGNG--GHSNAHLNTPPSTAIDLGTGRTAVALSQ-FHHTCAILDNGDLKCWGLNDYGQLGDGGSS-----------VTTNSPSSTPVNLGSGRTAVAVSTDRYNTCAILDNGDLKCWGRDQYGQLGDGGSNPGTDLNAPSSTAIDLGSGRTAVAVSSGYLHTCAILDNGDLKCWGGDSDGQLGDGGSNTQTLEPSSTPVNLGSGRTAVAVSAGTSHTCAILDNGDLKCWGENGQGQLGDGGNFNTNAPSATPVNLGTGRTAVAVTAGEYHTCAILDNGSLKCWGHDSWGQLGDGGSIANTNAPSATPVNLGSGRTAVAVSSTYGHTCAILDNGEARCWGRDNYGQLGDGGS 950
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BLAST of jgi.p|Trimin1|167807 vs. uniprot
Match: A0A835T669_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T669_9CHLO)

HSP 1 Score: 317 bits (813), Expect = 5.030e-101
Identity = 193/422 (45.73%), Postives = 248/422 (58.77%), Query Frame = 1 
Query:   52 ACSTGDSHACALLDDSTVKCWGSGYNGQLGQGSSGSSAADLSSPPRS--AINLGSGRTAKAIATGVAHTCALLDVSTVKCWGSNDFGQLGQGTSGNSDSSTXXXXDADLS-TPPRSAVNLGSSRTAKAIAAGAHHTCALLDDSTVKCWGSGYSGQLGQGESDSSAQLNSPPRR-----AINLGSGRTAKAIAAGDTHTCALLDDSTVKCWGEGEYGQLGQGNYVLL------TSPASTAINLGPGRKAKAIAAGGHNTCVLLDDFTVKCWGEGKYGQLGQGRKTDLFLPP------ISAINLGPGRTAKAIATSGHHMCAILDDSTVKCWGEGDYGEFGLGNNAELSSPP------IRVVDLGSGRTATAISAGYIFTCALLDDSTIKCLGHGARGQLGQGSTANVGDKPHEMAS-LPAIVL 1236
            A S G  H C LLD+  +KCWG+   GQLG G +     D         A+ LG+GRTA AI+ G  HTCALLD  ++KCWG N+ GQLG G     D+S+      ++  T P  A+ LG+ RTA AI+ G  HTCALLD+ +VKCWG    GQLG G  D+S + + P        AI LG+GRTA AI+ G  HTCALLD+ ++KCWG   YGQLG G+                AI LG GR AKAI+AGG++TC LLD+ +VKCWG    GQLG G  +     P      + A+ LG GRTA AI+   +H CA+LD+  VKCWG    G+ GLG+ +   + P      +  + LG+GRTA AI AG   TCALLD+ ++KC G+   GQLG G+T++ GD P EM   LPA+ L
Sbjct:   46 AISVGQLHTCVLLDNGYIKCWGANGAGQLGLGDTSYRGDDRGEMGNRLPAVALGTGRTATAISAGFLHTCALLDNGSIKCWGYNNAGQLGLG-----DTSSRGDGPGEMGDTLP--AITLGTGRTATAISVGGIHTCALLDNGSVKCWGYNAYGQLGLG--DTSDRGDGPGEMGDTLPAITLGTGRTAAAISVGGYHTCALLDNGSIKCWGYNAYGQLGLGDTSSRGDGPGEMGDTLPAITLGTGRTAKAISAGGYHTCALLDNGSVKCWGANGNGQLGLGDTSYRSDGPGEMGDTLPAVVLGTGRTATAISAGYYHTCALLDNGYVKCWGYNSDGQLGLGDTSYRGNGPGEMGDTLPAITLGTGRTAMAIFAGGYHTCALLDNGSVKCWGYNGNGQLGLGNTSDRGDGPGEMGDMLPAVSL 458
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BLAST of jgi.p|Trimin1|167807 vs. uniprot
Match: A0A3T0RSR7_9PROT (Uncharacterized protein n=1 Tax=Bdellovibrio sp. qaytius TaxID=1916293 RepID=A0A3T0RSR7_9PROT)

HSP 1 Score: 325 bits (834), Expect = 1.070e-99
Identity = 201/436 (46.10%), Postives = 266/436 (61.01%), Query Frame = 1 
Query:   49 LACSTGDSHACALLDDSTVKCWGSGYNGQLGQG---SSGSSAADLSSPPRSAINLGSGRTAKAIATGVAHTCALLDVSTVKCWGSNDFGQLGQGTSGNSDSSTXXXXDADLSTPPRSAVNLGSSRTAKAIAAGAHHTCALLDDSTVKCWGSGYSGQLGQGE----SDSSAQL-NSPPRRAINLGSGRTAKAIAAGDTHTCALLDDSTVKCWGEGEYGQLGQGN-------------YVLL------TSPASTAINLGPGRKAKAIAAGGHNTCVLLDDFTVKCWGEGKYGQLGQGRKTDL------FLPPISAINLGPGRTAKAIATS-GHHMCAILDDSTVKCWGEGDYGEFG------LGNNAELSSPPIRVVDLGSGRTATAISAGYIFTCALLDDSTIKCLGHGARGQLGQGSTANVGDKPHEMASLPAIVL 1236
            +A   G SH CALLD+STVKCWG   +GQLGQG   S G  A+++ +   +AI+LG+ RTA AIA G  H+CALLD ++VKCWG N  GQLGQG + +   ++    D   S P    ++LG++R A  I AG  HTCALLD+STVKCWG    GQLGQG      D S ++ +S P  AI+LG+GRTA AI+AG+  TCA+LDDST+KCWG G  GQLG GN             ++L       TS  +  +N    +K K ++ G ++TC ++D+ +VKCWG    GQLGQG    L          + AINLG GRTA  I+ S   H CA+LD++TVKCWG+   G+ G      LG++A      +  ++LG+ RTATAI+ G   +CALLD+ST+KC G+   GQLGQG++   G    EMASL +I L
Sbjct:  220 VALEAGGSHTCALLDNSTVKCWGLNSSGQLGQGHANSLGKGASEMGNN-LTAISLGASRTAVAIAIGNTHSCALLDNASVKCWGGNTSGQLGQGHTNSLGDASGEMGD---SLP---VIDLGTNRKAIQITAGLTHTCALLDNSTVKCWGDNTYGQLGQGHVNKLGDGSGEMGDSLP--AIDLGTGRTAVAISAGEVQTCAILDDSTLKCWGRGSLGQLGYGNGTNYGDGANEMGDFLLKVKLGSSTSRLTKVLNKNIKQKYKPVSMGAYHTCAIIDNGSVKCWGRNTEGQLGQGHTNSLGDGAGEMGDNLPAINLGTGRTATQISVSYDKHTCALLDNATVKCWGKNSSGQLGQEHANNLGDDAGEMGDSLPAINLGASRTATAIATGEQHSCALLDNSTVKCWGYNFYGQLGQGNSTTKGVGAGEMASLTSINL 646
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BLAST of jgi.p|Trimin1|167807 vs. uniprot
Match: A0A520PN85_9PROT (Big_5 domain-containing protein (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A520PN85_9PROT)

HSP 1 Score: 316 bits (810), Expect = 5.600e-99
Identity = 187/426 (43.90%), Postives = 256/426 (60.09%), Query Frame = 1 
Query:   58 STGDSHACALLDDSTVKCWGSGYNGQLGQGSSGS--SAADLSSPPRSAINLGSGRTAKAIATGVAHTCALLDVSTVKCWGSNDFGQLGQGTSGNSDSSTXXXXDA-----DLSTPPRSAVNLGSSRTAKAIAAGAHHTCALLDDSTVKCWGSGYSGQLGQGESDS---SAQLNSPPRRAINLGSGRTAKAIAAGDTHTCALLDDSTVKCWGEGEYGQLGQGNYVLLTSPAST------AINLGPGRKAKAIAAGGHNTCVLLDDFTVKCWGEGKYGQLGQGRKTDL------FLPPISAINLGPGRTAKAIATSGHHMCAILDDSTVKCWGEGDYGEFGLGNNAELSSPP-----------IRVVDLGSGRTATAISAGY-IFTCALLDDSTIKCLGHGARGQLGQGSTANVGDKPHEMA-SLPAI 1230
            + G  H C +L++S+VKCWG   +GQLG G + S    A+      S+++LG+GRTAKAIA     TCA+LD S++KCWG ND GQLGQG        T    DA     D  TP    ++LG+ RTA AIA G  H CA+LD+S++KCWG   +GQLG G +D     A        +I+LG+GRTA AIAAG  H+CA+LD+S VKCWG+ + GQLG G+       A        A++LG GR A +I AG  +TC LLD+++VKCWG+   GQ+G G+  DL          ++AI+LG GRTA AI+    H CA+LD+S++KCWG  D G+ GLG+ +   +             +  +DLG+GRTA  +  G  + TC ++D+S+IKC G+ A GQLG G T + GD  +EM  +LP+I
Sbjct:  190 TAGAYHTCTILENSSVKCWGKNDSGQLGLGDTNSRGDGANEMGANLSSVDLGTGRTAKAIAANRVATCAILDNSSIKCWGKNDRGQLGQGN-------TNSLGDAGSEMGDNLTP----IDLGTGRTATAIAGGGWHNCAILDNSSIKCWGINSAGQLGIGSTDDRGDGANEMGDNLPSIDLGTGRTATAIAAGGAHSCAILDNSAVKCWGKNDAGQLGLGDTNNRGDGADEMGDDLDAVDLGTGRTAVSITAGYAHTCALLDNYSVKCWGDAAEGQMGTGKTFDLGDAAGEMGDSLTAIDLGTGRTATAISAGRSHTCAMLDNSSIKCWGSNDSGQLGLGDTSNRGNTVQGDGSSQMGDNLPSIDLGTGRTARGVITGEGLHTCTIMDNSSIKCWGYNASGQLGIGDTDSRGDGANEMGDNLPSI 604
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BLAST of jgi.p|Trimin1|167807 vs. uniprot
Match: A0A424Q6L7_9EURY (LamGL domain-containing protein (Fragment) n=1 Tax=Euryarchaeota archaeon TMED141 TaxID=1986686 RepID=A0A424Q6L7_9EURY)

HSP 1 Score: 333 bits (853), Expect = 1.180e-98
Identity = 185/377 (49.07%), Postives = 237/377 (62.86%), Query Frame = 1 
Query:   73 HACALLDDSTVKCWGSGYNGQLGQGSSGSSAADLSSPPRSAINLGSGRTAKAIATGVAHTCALLDVSTVKCWGSNDFGQLGQGTS--GNSDSSTXXXXDADLSTPPRSAVNLGSSRTAKAIAAGAHHTCALLDDSTVKCWGSGYSGQLGQGESDSSAQLNSPPRRAINLGSGRTAKAIAAGDTHTCALLDDSTVKCWGEGEYGQLGQGNYVLLTSPASTAI---NLGPGRKAKAIAAGGHNTCVLLDDFTVKCWGEGKYGQLGQGRKTDLFL--PPISAINLGPGRTAKAIATSGHHMCAILDDSTVKCWGEGDYGEFGLGN--NAELSSPPIRVVDLGSGRTATAISAGYIFTCALLDDSTIKCLGHGARGQLGQG 1176
            H CA+LD+  +KCWG   +GQLG G S S   D+++PP +A+NLG+GRTA A++ G +HTCA+LD   VKCWGS+ +GQLG G S    SDSST             S VNLG+ RTA AI+AG  HTCA+LD+   KCWGS   GQLG G S ++  + +P    INLG+GRTA AI+AG  HTCA+LD+ ++ CWG   YGQLG G     +S AS+ I   +LG  R A A++ G ++TC LLD+  VKCWG    GQLG G  T      PP SAINLG GRTA +I+   +H CAILD+   KCWG    G  G G   N  +++P    ++LG+GRTA A++AG   TCA+LD+   KC G    GQLG G
Sbjct: 1822 HTCAILDNGDLKCWGQDTSGQLGDGGSNS---DVNAPPSTALNLGTGRTAVAVSAGNSHTCAILDNGDVKCWGSDGYGQLGNGNSIGSTSDSSTA------------SVVNLGTGRTAVAISAGREHTCAILDNGDAKCWGSDGKGQLGDGGS-TNTNIXAPSSTPINLGTGRTAVAISAGYDHTCAVLDNGSIACWGWNNYGQLGHGGPTGSSSSASSPIVTNSLGAXRTAVAVSTGYYHTCALLDNGEVKCWGYDGQGQLGDGGSTXXXXXXPPSSAINLGTGRTAVSISVGQYHTCAILDNGDAKCWGSDGNGRLGDGGSTNTNINAPSSTPINLGTGRTAVALAAGGKHTCAILDNGVAKCWGADFDGQLGNG 2182
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BLAST of jgi.p|Trimin1|167807 vs. uniprot
Match: UPI00188DA198 (RCC1 domain-containing protein n=1 Tax=Nocardioides agariphilus TaxID=433664 RepID=UPI00188DA198)

HSP 1 Score: 313 bits (801), Expect = 3.790e-98
Identity = 181/397 (45.59%), Postives = 246/397 (61.96%), Query Frame = 1 
Query:   58 STGDSHACALLDDSTVKCWGSGYNGQLGQGSS---GSSAADLSSPPRSAINLGSGRTAKAIATGVAHTCALLDVSTVKCWGSNDFGQLGQGTSGNSDSSTXXXXDADLSTPPR-SAVNLGSSRTAKAIAAGAHHTCALLDDSTVKCWGSGYSGQLGQGESDSSAQLNSPPRRA-INLGSGRTAKAIAAGDTHTCALLDDSTVKCWGEGEYGQLGQGNYVLL---TSPASTA-INLGPGRKAKAIAAGGHNTCVLLDDFTVKCWGEGKYGQLGQGRKTDLF--LPPISA--INLGPGRTAKAIATSGHHMCAILDDSTVKCWGEGDYGEFGLGNNAEL--SSPPIRV--VDLGSGRTATAISAGYIFTCALLDDSTIKCLGHGARGQLGQGSTANVGD 1197
            + G  H+CA+LD+ +V+CWG    GQLG G++   G SA+  ++ P   ++LG+GRTA AI+ G AHTCA+LD  +V+CWG N +GQLG G + N           D  TP   S V+LG+ RTA AIAAG  HTCA+LD+ TV CWG   SG LG G  D      +P     ++LG+GRTA AIAAG  HTCA+LD+ TV+CWG    G+LG GN  ++    +P +   ++LGPGRKA +IA   ++TCV+LD   V+CWG    G LG G   ++     P  A  +NLG GRTA AI  +G H CAILD   V+CWG   YG+ G G+  ++  +  P     V+LG+GRTA A++AG+  TCA+LD+  ++C G+   GQLG G+T  +GD
Sbjct:   48 AAGGHHSCAILDNRSVRCWGQNNFGQLGYGNTDNVGDSASPATAGP---VDLGAGRTALAISAGEAHTCAILDDRSVRCWGYNFYGQLGYGNTNNI---------GDDETPASVSPVDLGTGRTALAIAAGVDHTCAILDNHTVLCWGYNASGGLGYGNLDVIGDNETPASAGPVDLGAGRTALAIAAGAQHTCAVLDNHTVRCWGFNSNGELGYGNTDVIGDNEAPGTAGPVDLGPGRKAFSIAVSDYHTCVILDTKAVRCWGYNASGGLGYGNTDNIGDNETPADAGPVNLGTGRTASAITAAGEHTCAILDTKAVRCWGYNFYGQLGYGHTNDIGDNETPATASPVNLGTGRTALALAAGWDHTCAVLDNRQLRCWGYNFYGQLGYGNTDQIGD 432
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BLAST of jgi.p|Trimin1|167807 vs. uniprot
Match: A0A7W1JJW5_9ACTN (Uncharacterized protein n=1 Tax=Nocardioidaceae bacterium TaxID=1871072 RepID=A0A7W1JJW5_9ACTN)

HSP 1 Score: 315 bits (806), Expect = 2.440e-97
Identity = 186/405 (45.93%), Postives = 240/405 (59.26%), Query Frame = 1 
Query:   64 GDSHACALLDDSTVKCWGSGYNGQLGQGSSGSSAADLSSPPRSAINLGSGRTAKAIATGVAHTCALLDVSTVKCWGSNDFGQLGQGTSGNSDSSTXXXXDADLSTPPRSAVNLGSSRTAKAIAAGAHHTCALLDDSTVKCWGSGYSGQLGQGESDSSAQLNSPPR-RAINLGSGRTAKAIAAGDTHTCALLDDSTVKCWGEGEYGQLGQGNYVLL----TSPASTA-INLGPGRKAKAIAAGGHNTCVLLDDFTVKCWGEGKYGQLGQGRKT---DLFLP-PISAINLGPGRTAKAIATSGHHMCAILDDSTVKCWGEGDYGEFGLGNNAELSSPP----IRVVDLGSGRTATAISAGYIFTCALLDDSTIKCLGHGARGQLGQGSTANVGDKPHEMASLPAIVL 1236
            G  H CAL    TV+CWG G  GQLG GS+ +   D +      +NLGSGR A AI+ G+AHTCALLD STV+CWG    GQLG G      SS      A  + P    V+LG  RT  AI+AGA+HTCA+L+  +++CWG+   GQLG    DS     +P     ++LG GRTA AI A   HTCAL+DD  V+CWG G  GQLG GN V +     +PAS   ++LG GR A+AI AG  +TC +LD+ TV+CWG  + GQLG G  +   D   P  ++ +NL PGRTA+AIA    H CA+LD+ TV+CWG G  G  G GN   +        +  V+LG GRTA AISAG   TCA LDD++++C G+G  G+LG  S  ++GD     +  P  +L
Sbjct:   50 GTDHTCALAQG-TVRCWGFGAAGQLGYGSTNTIGDDETPGSAGPVNLGSGRGATAISAGLAHTCALLDDSTVRCWGFGADGQLGYGNI----SSIGDDEGAGSAGP----VDLGLGRTVTAISAGAYHTCAVLNGGSLRCWGNDRYGQLGYYRVDSIGDNETPGSVEPVDLGPGRTATAITASTRHTCALMDDGNVRCWGSGVNGQLGYGNMVSVGGGGDTPASAGPVDLGAGRTAEAITAGALHTCAVLDNGTVRCWGFNQNGQLGYGATSTIGDTETPGSVAPVNLAPGRTARAIAAGEDHTCALLDNGTVRCWGNGTQGRLGYGNADSIGDDETPGSVAPVNLGPGRTAVAISAGGAQTCARLDDASVRCWGYGGNGRLGLCSGRSIGDDEAPGSVGPVALL 445
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167807 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YY51_9STRA1.420e-298100.00Regulator of chromosome condensation 1/beta-lactam... [more]
A0A835ZEC2_9STRA3.020e-16163.10Regulator of chromosome condensation 1/beta-lactam... [more]
A0A7Z9UFE8_9BACT8.730e-10244.60Big_5 domain-containing protein n=1 Tax=Candidatus... [more]
A0A2E8V2I0_9EURY9.590e-10246.95Uncharacterized protein (Fragment) n=1 Tax=Euryarc... [more]
A0A835T669_9CHLO5.030e-10145.73Uncharacterized protein n=1 Tax=Chlamydomonas schl... [more]
A0A3T0RSR7_9PROT1.070e-9946.10Uncharacterized protein n=1 Tax=Bdellovibrio sp. q... [more]
A0A520PN85_9PROT5.600e-9943.90Big_5 domain-containing protein (Fragment) n=1 Tax... [more]
A0A424Q6L7_9EURY1.180e-9849.07LamGL domain-containing protein (Fragment) n=1 Tax... [more]
UPI00188DA1983.790e-9845.59RCC1 domain-containing protein n=1 Tax=Nocardioide... [more]
A0A7W1JJW5_9ACTN2.440e-9745.93Uncharacterized protein n=1 Tax=Nocardioidaceae ba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_53contigContig_53:269580..270818 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|167807|e_gw1.53.67.1
DescriptionRegulator of chromosome condensation (RCC1) repeat
COG categoryM
Max annot lvl201174|Actinobacteria
EggNOG OGsCOG5184@1|root,COG5184@2|Bacteria,2IDH9@201174|Actinobacteria
Evalue3.17e-101
Seed ortholog1313172.YM304_10020
Hectar predicted targeting categoryother localisation
TranscriptId168129
TrackFilteredModels1
ProteinId167807
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167807gene_8161Tribonema minus UTEX_B_3156 geneContig_53 269580..270818 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8161_1exon_8161_1Tribonema minus UTEX_B_3156 exonContig_53 269580..270818 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8161CDS_8161Tribonema minus UTEX_B_3156 CDSContig_53 269580..270818 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167807Trimin1|167807|e_gw1.53.67.1Tribonema minus UTEX_B_3156 polypeptideContig_53 269580..270818 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8161 ID=mRNA_8161|Name=jgi.p|Trimin1|167807|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1239bp|location=Sequence derived from alignment at Contig_53:269580..270818+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGCTGGATGATGGTTTGCTTGAAGTCTACCTTGTTCTCTTCCCACT
GGCATGTTCAACAGGTGACTCGCACGCATGCGCCCTTCTAGATGACTCCA
CTGTCAAGTGCTGGGGGAGCGGATATAATGGTCAGCTCGGGCAAGGCAGC
TCTGGCTCCTCAGCGGCTGACCTCAGCTCACCTCCACGCAGCGCTATCAA
CTTGGGGTCTGGCAGAACGGCGAAGGCCATCGCCACAGGTGTTGCACACA
CGTGTGCCCTTCTGGATGTCTCCACGGTCAAGTGCTGGGGCAGCAATGAT
TTTGGTCAGCTGGGGCAGGGCACCTCGGGAAACTCCGACTCCTCGACTAC
TGATCTTAGCGATGCTGACCTAAGCACGCCACCACGCAGCGCCGTCAACC
TGGGTTCAAGCAGAACGGCGAAGGCCATCGCTGCAGGTGCTCATCACACA
TGCGCCCTTTTAGATGATTCCACGGTCAAGTGCTGGGGCAGCGGATACTC
TGGTCAGCTGGGGCAGGGCGAAAGTGACTCCTCTGCTCAACTCAACTCGC
CGCCACGCAGGGCCATCAACCTTGGGTCAGGCCGAACAGCGAAGGCCATC
GCCGCAGGTGACACCCACACGTGCGCCCTCCTAGATGATTCGACGGTCAA
GTGCTGGGGCGAAGGAGAGTATGGTCAGCTAGGGCAGGGCAATTATGTGT
TGCTGACCTCACCCGCAAGCACCGCCATCAACCTGGGTCCAGGCAGAAAG
GCAAAAGCCATTGCCGCAGGTGGTCACAACACGTGTGTCCTTCTAGATGA
TTTCACGGTCAAGTGCTGGGGCGAAGGAAAGTATGGTCAGCTGGGACAGG
GCAGAAAAACTGACCTCTTTTTGCCCCCAATCAGCGCCATCAACCTGGGG
CCTGGCAGAACGGCGAAAGCCATCGCCACAAGTGGTCATCACATGTGTGC
CATTCTGGATGATTCCACGGTCAAGTGCTGGGGCGAGGGAGATTATGGTG
AGTTTGGGCTGGGCAACAATGCTGAATTGAGCTCGCCGCCAATCAGGGTT
GTCGACCTGGGGTCGGGCAGAACGGCGACAGCCATCAGCGCAGGTTATAT
ATTCACGTGCGCCCTTCTAGATGATTCCACGATCAAGTGCTTGGGTCACG
GAGCGCGGGGTCAGCTTGGGCAGGGCAGCACTGCTAATGTGGGCGACAAA
CCACACGAGATGGCCTCCCTTCCAGCAATTGTCCTGTGA
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protein sequence of jgi.p|Trimin1|167807

>Trimin1|167807|e_gw1.53.67.1 ID=Trimin1|167807|e_gw1.53.67.1|Name=jgi.p|Trimin1|167807|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=413bp
MRLDDGLLEVYLVLFPLACSTGDSHACALLDDSTVKCWGSGYNGQLGQGS
SGSSAADLSSPPRSAINLGSGRTAKAIATGVAHTCALLDVSTVKCWGSND
FGQLGQGTSGNSDSSTTDLSDADLSTPPRSAVNLGSSRTAKAIAAGAHHT
CALLDDSTVKCWGSGYSGQLGQGESDSSAQLNSPPRRAINLGSGRTAKAI
AAGDTHTCALLDDSTVKCWGEGEYGQLGQGNYVLLTSPASTAINLGPGRK
AKAIAAGGHNTCVLLDDFTVKCWGEGKYGQLGQGRKTDLFLPPISAINLG
PGRTAKAIATSGHHMCAILDDSTVKCWGEGDYGEFGLGNNAELSSPPIRV
VDLGSGRTATAISAGYIFTCALLDDSTIKCLGHGARGQLGQGSTANVGDK
PHEMASLPAIVL*
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mRNA from alignment at Contig_53:269580..270818+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8161 ID=mRNA_8161|Name=jgi.p|Trimin1|167807|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1239bp|location=Sequence derived from alignment at Contig_53:269580..270818+ (Tribonema minus UTEX_B_3156 )
ATGAGGCTGGATGATGGTTTGCTTGAAGTCTACCTTGTTCTCTTCCCACT
GGCATGTTCAACAGGTGACTCGCACGCATGCGCCCTTCTAGATGACTCCA
CTGTCAAGTGCTGGGGGAGCGGATATAATGGTCAGCTCGGGCAAGGCAGC
TCTGGCTCCTCAGCGGCTGACCTCAGCTCACCTCCACGCAGCGCTATCAA
CTTGGGGTCTGGCAGAACGGCGAAGGCCATCGCCACAGGTGTTGCACACA
CGTGTGCCCTTCTGGATGTCTCCACGGTCAAGTGCTGGGGCAGCAATGAT
TTTGGTCAGCTGGGGCAGGGCACCTCGGGAAACTCCGACTCCTCGACTAC
TGATCTTAGCGATGCTGACCTAAGCACGCCACCACGCAGCGCCGTCAACC
TGGGTTCAAGCAGAACGGCGAAGGCCATCGCTGCAGGTGCTCATCACACA
TGCGCCCTTTTAGATGATTCCACGGTCAAGTGCTGGGGCAGCGGATACTC
TGGTCAGCTGGGGCAGGGCGAAAGTGACTCCTCTGCTCAACTCAACTCGC
CGCCACGCAGGGCCATCAACCTTGGGTCAGGCCGAACAGCGAAGGCCATC
GCCGCAGGTGACACCCACACGTGCGCCCTCCTAGATGATTCGACGGTCAA
GTGCTGGGGCGAAGGAGAGTATGGTCAGCTAGGGCAGGGCAATTATGTGT
TGCTGACCTCACCCGCAAGCACCGCCATCAACCTGGGTCCAGGCAGAAAG
GCAAAAGCCATTGCCGCAGGTGGTCACAACACGTGTGTCCTTCTAGATGA
TTTCACGGTCAAGTGCTGGGGCGAAGGAAAGTATGGTCAGCTGGGACAGG
GCAGAAAAACTGACCTCTTTTTGCCCCCAATCAGCGCCATCAACCTGGGG
CCTGGCAGAACGGCGAAAGCCATCGCCACAAGTGGTCATCACATGTGTGC
CATTCTGGATGATTCCACGGTCAAGTGCTGGGGCGAGGGAGATTATGGTG
AGTTTGGGCTGGGCAACAATGCTGAATTGAGCTCGCCGCCAATCAGGGTT
GTCGACCTGGGGTCGGGCAGAACGGCGACAGCCATCAGCGCAGGTTATAT
ATTCACGTGCGCCCTTCTAGATGATTCCACGATCAAGTGCTTGGGTCACG
GAGCGCGGGGTCAGCTTGGGCAGGGCAGCACTGCTAATGTGGGCGACAAA
CCACACGAGATGGCCTCCCTTCCAGCAATTGTCCTGTGA
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Coding sequence (CDS) from alignment at Contig_53:269580..270818+

>mRNA_8161 ID=mRNA_8161|Name=jgi.p|Trimin1|167807|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1239bp|location=Sequence derived from alignment at Contig_53:269580..270818+ (Tribonema minus UTEX_B_3156 )
ATGAGGCTGGATGATGGTTTGCTTGAAGTCTACCTTGTTCTCTTCCCACT
GGCATGTTCAACAGGTGACTCGCACGCATGCGCCCTTCTAGATGACTCCA
CTGTCAAGTGCTGGGGGAGCGGATATAATGGTCAGCTCGGGCAAGGCAGC
TCTGGCTCCTCAGCGGCTGACCTCAGCTCACCTCCACGCAGCGCTATCAA
CTTGGGGTCTGGCAGAACGGCGAAGGCCATCGCCACAGGTGTTGCACACA
CGTGTGCCCTTCTGGATGTCTCCACGGTCAAGTGCTGGGGCAGCAATGAT
TTTGGTCAGCTGGGGCAGGGCACCTCGGGAAACTCCGACTCCTCGACTAC
TGATCTTAGCGATGCTGACCTAAGCACGCCACCACGCAGCGCCGTCAACC
TGGGTTCAAGCAGAACGGCGAAGGCCATCGCTGCAGGTGCTCATCACACA
TGCGCCCTTTTAGATGATTCCACGGTCAAGTGCTGGGGCAGCGGATACTC
TGGTCAGCTGGGGCAGGGCGAAAGTGACTCCTCTGCTCAACTCAACTCGC
CGCCACGCAGGGCCATCAACCTTGGGTCAGGCCGAACAGCGAAGGCCATC
GCCGCAGGTGACACCCACACGTGCGCCCTCCTAGATGATTCGACGGTCAA
GTGCTGGGGCGAAGGAGAGTATGGTCAGCTAGGGCAGGGCAATTATGTGT
TGCTGACCTCACCCGCAAGCACCGCCATCAACCTGGGTCCAGGCAGAAAG
GCAAAAGCCATTGCCGCAGGTGGTCACAACACGTGTGTCCTTCTAGATGA
TTTCACGGTCAAGTGCTGGGGCGAAGGAAAGTATGGTCAGCTGGGACAGG
GCAGAAAAACTGACCTCTTTTTGCCCCCAATCAGCGCCATCAACCTGGGG
CCTGGCAGAACGGCGAAAGCCATCGCCACAAGTGGTCATCACATGTGTGC
CATTCTGGATGATTCCACGGTCAAGTGCTGGGGCGAGGGAGATTATGGTG
AGTTTGGGCTGGGCAACAATGCTGAATTGAGCTCGCCGCCAATCAGGGTT
GTCGACCTGGGGTCGGGCAGAACGGCGACAGCCATCAGCGCAGGTTATAT
ATTCACGTGCGCCCTTCTAGATGATTCCACGATCAAGTGCTTGGGTCACG
GAGCGCGGGGTCAGCTTGGGCAGGGCAGCACTGCTAATGTGGGCGACAAA
CCACACGAGATGGCCTCCCTTCCAGCAATTGTCCTGTGA
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