mRNA_9986 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|349972 vs. uniprot
Match: A0A835YQQ2_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQQ2_9STRA) HSP 1 Score: 2124 bits (5503), Expect = 0.000e+0 Identity = 1341/1341 (100.00%), Postives = 1341/1341 (100.00%), Query Frame = 1 Query: 1 MVTEYKFLAGKTAPCNVSDKDKRPLVTVHAAPTNNARIGGHRPDNTLELTEVGVDFAKAGRMDNQAFRMTLHCAGPLRRGQASGANCWRNPAGGRWCASTTRECEPGCKWLLNTKQAGHRCSVSLLITATIEQVVAKQMQVCIRGQHTGGNVAAVPVARLQRTLSRLTQDSIRSQYLAAPTSRTRAVMEAKAKIPVGEEVTGRNMPVHTRVSGMRTYSAAKHSSPLAGPFVGFNDTVTRFCLSLARPLASGCEVLYYKYEPGGILQLIFTKREALAVLAAQPVDFLVSDSKFDTAGEKPAFTMLGFPLPDRQGMQPLVGSISSMEDGDTTYRIARALQWAMPCRPNCTHGWEEGRTEDEYIRWRSCARKRAEXXXXXXXXXXXXXXXXXXXXGGMRANVDRFAPMVQIDKSSTAREGFTRAGWKTAVCFFHLIRATLKNLEQRLGKRHQMLRHFDRAIRLLMRAAKERYQEALTVLLAMVEQWGKADLLGDANTDNNLCKYLFEALGGAGTLWEGMIGDAVGEGVRGFCGTNNYSESHFRVLDECLFFGRLNGRFQRLLEVFLGVTGTGERALGRTYYELFDHLLQQRQLAGGSRVRCAERRRAVNGSWLNCLGKVARPRGGPGGGDTEWFFVEAGVKNAIEPATPRRQMEPQPDKVPLLDANAVFADLLAVIKPDRAPNPQDGCYLVGVRLDPLTEKEVVTCTCAMYNRRGNRHDLCKHGLAALACREVERRGEAALEEQQQCVMQSCGNAERARSAATTDHNLYKACRESNWRVVRAILLEGRCARGGAALVVHTVTIAAGVACDIELEEASEAMCAQLEITDDEPAFLIWSGAVRGGCSWQPALPKARSLHANDVVYRVGNIEITDIMSARAAQAALADKAEIFMKRIDAIMACMDAHKESPRIMRWGLKAVAEACYVNEVYFQSLADVCQMMAEAVHTHRNQEQVQAAALEAMHMLGNESNEATRRFQEAGMCEAVAAIMRRYPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDSSACRSALGEAHAQQAVTEVVDYYKGSDSSETMFALLAMAKLMTNHRANVAAFGAAGACVAVAHVLATHKDGWERAMRLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRATATALAVHAAQGKVVQQGLRVVANLSDNSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSLSSDDPANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRAFLAVAVTGAAL 4023 MVTEYKFLAGKTAPCNVSDKDKRPLVTVHAAPTNNARIGGHRPDNTLELTEVGVDFAKAGRMDNQAFRMTLHCAGPLRRGQASGANCWRNPAGGRWCASTTRECEPGCKWLLNTKQAGHRCSVSLLITATIEQVVAKQMQVCIRGQHTGGNVAAVPVARLQRTLSRLTQDSIRSQYLAAPTSRTRAVMEAKAKIPVGEEVTGRNMPVHTRVSGMRTYSAAKHSSPLAGPFVGFNDTVTRFCLSLARPLASGCEVLYYKYEPGGILQLIFTKREALAVLAAQPVDFLVSDSKFDTAGEKPAFTMLGFPLPDRQGMQPLVGSISSMEDGDTTYRIARALQWAMPCRPNCTHGWEEGRTEDEYIRWRSCARKRAEXXXXXXXXXXXXXXXXXXXXGGMRANVDRFAPMVQIDKSSTAREGFTRAGWKTAVCFFHLIRATLKNLEQRLGKRHQMLRHFDRAIRLLMRAAKERYQEALTVLLAMVEQWGKADLLGDANTDNNLCKYLFEALGGAGTLWEGMIGDAVGEGVRGFCGTNNYSESHFRVLDECLFFGRLNGRFQRLLEVFLGVTGTGERALGRTYYELFDHLLQQRQLAGGSRVRCAERRRAVNGSWLNCLGKVARPRGGPGGGDTEWFFVEAGVKNAIEPATPRRQMEPQPDKVPLLDANAVFADLLAVIKPDRAPNPQDGCYLVGVRLDPLTEKEVVTCTCAMYNRRGNRHDLCKHGLAALACREVERRGEAALEEQQQCVMQSCGNAERARSAATTDHNLYKACRESNWRVVRAILLEGRCARGGAALVVHTVTIAAGVACDIELEEASEAMCAQLEITDDEPAFLIWSGAVRGGCSWQPALPKARSLHANDVVYRVGNIEITDIMSARAAQAALADKAEIFMKRIDAIMACMDAHKESPRIMRWGLKAVAEACYVNEVYFQSLADVCQMMAEAVHTHRNQEQVQAAALEAMHMLGNESNEATRRFQEAGMCEAVAAIMRRYPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDSSACRSALGEAHAQQAVTEVVDYYKGSDSSETMFALLAMAKLMTNHRANVAAFGAAGACVAVAHVLATHKDGWERAMRLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRATATALAVHAAQGKVVQQGLRVVANLSDNSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSLSSDDPANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRAFLAVAVTGAAL Sbjct: 1 MVTEYKFLAGKTAPCNVSDKDKRPLVTVHAAPTNNARIGGHRPDNTLELTEVGVDFAKAGRMDNQAFRMTLHCAGPLRRGQASGANCWRNPAGGRWCASTTRECEPGCKWLLNTKQAGHRCSVSLLITATIEQVVAKQMQVCIRGQHTGGNVAAVPVARLQRTLSRLTQDSIRSQYLAAPTSRTRAVMEAKAKIPVGEEVTGRNMPVHTRVSGMRTYSAAKHSSPLAGPFVGFNDTVTRFCLSLARPLASGCEVLYYKYEPGGILQLIFTKREALAVLAAQPVDFLVSDSKFDTAGEKPAFTMLGFPLPDRQGMQPLVGSISSMEDGDTTYRIARALQWAMPCRPNCTHGWEEGRTEDEYIRWRSCARKRAEXXXXXXXXXXXXXXXXXXXXGGMRANVDRFAPMVQIDKSSTAREGFTRAGWKTAVCFFHLIRATLKNLEQRLGKRHQMLRHFDRAIRLLMRAAKERYQEALTVLLAMVEQWGKADLLGDANTDNNLCKYLFEALGGAGTLWEGMIGDAVGEGVRGFCGTNNYSESHFRVLDECLFFGRLNGRFQRLLEVFLGVTGTGERALGRTYYELFDHLLQQRQLAGGSRVRCAERRRAVNGSWLNCLGKVARPRGGPGGGDTEWFFVEAGVKNAIEPATPRRQMEPQPDKVPLLDANAVFADLLAVIKPDRAPNPQDGCYLVGVRLDPLTEKEVVTCTCAMYNRRGNRHDLCKHGLAALACREVERRGEAALEEQQQCVMQSCGNAERARSAATTDHNLYKACRESNWRVVRAILLEGRCARGGAALVVHTVTIAAGVACDIELEEASEAMCAQLEITDDEPAFLIWSGAVRGGCSWQPALPKARSLHANDVVYRVGNIEITDIMSARAAQAALADKAEIFMKRIDAIMACMDAHKESPRIMRWGLKAVAEACYVNEVYFQSLADVCQMMAEAVHTHRNQEQVQAAALEAMHMLGNESNEATRRFQEAGMCEAVAAIMRRYPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDSSACRSALGEAHAQQAVTEVVDYYKGSDSSETMFALLAMAKLMTNHRANVAAFGAAGACVAVAHVLATHKDGWERAMRLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRATATALAVHAAQGKVVQQGLRVVANLSDNSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSLSSDDPANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRAFLAVAVTGAAL 1341
BLAST of jgi.p|Trimin1|349972 vs. uniprot
Match: A0A835YS27_9STRA (SWIM-type domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS27_9STRA) HSP 1 Score: 514 bits (1324), Expect = 1.920e-155 Identity = 342/918 (37.25%), Postives = 471/918 (51.31%), Query Frame = 1 Query: 4 VTEYKFLAGKTAPCNVSDKDKRPLVTVHAAPTNNARIGGHRPDNTLELTEVGVDFAKAGRMDNQAFRMTLHCAGPLRRGQASGANCWRNP-AGGRWCASTTRE--CEPGCKWLLNTKQAGHRCSVSLLITATIEQVVAKQMQVCIRGQHTGGNVAAVPVARLQRTLSRLTQDSIRSQYLAAPTSRTRAVMEAKAKIPVGEEVTGRNMPVHTRVSGMRTYSAAKHSSPLAGPFVGFNDTVTRFCLSLARPLASGCEVLYYKYEPGGILQLIFTKREALAVLAAQPVDFLVSDSKFDTAGEKPAFTMLGFPLP-DRQGMQPLVGSISSMEDGDTTYRIARALQWAMPCRPNCTHGWEEGRTEDEYIRWRSCARKRAEXXXXXXXXXXXXXXXXXXXXGGMRANVDRFAPMVQIDKSSTAREGFTRAGWKTAVCFFHLIRATLKNLEQRLG-KRHQMLRHFDRAIRLLMRA-AKERYQEALTVLLAMVEQWGKADLLGDANTDNNLCKYLFEALGGAGTLWEGMIGDAVGEGVRGFCGTNNYSESHFRVLDECLFFGRLNGRFQRLLEVFLGVTGTGERALGR--TYYELFDHLLQQRQLAGGSRVRCAERRRAVNGSWLNCLGKVARPRGGPGGGDTEWFFVEAGVKNAIEPATPRR------------QMEPQPDKVPLLDANAVFADLLAVIKPDRAPNPQDGCYLVGVRLDPLTEKEVVTCTCAMYNRRGNRHDLCKHGLAALACREVERRGEAA-----LEEQQQCVMQSCGNAERARSAATTDHNLYKACRESNWRVVRAILLEGRCARGG------AALVV--HTVTIAAGVACDIELEEASEAMCAQLEITDDEPAFLIWSGAVRGGCSWQPALPKARSLHANDVVYRVGN----IEITDIMSARAAQAALAD 2646 ++ Y FLAG VS +D R L H A N +G HR DN L+ G + G+++ Q FR+ LHCAG SGANC +NP A G+WCA+ + C PGC W + A H C+V + +TATI QV+ +Q+ I G+HT V VPV + LS + D IR+ A R++A+ +A A +P G +TGR S + +Y+A S + G F F+ V + LS+A PL +G LYY+ E G +QL+ + +AL L + V F++SD+ + A +KPAF+++G P+P G +PLV SIS+ EDGD+T+ +A ALQ A+PC C H W+EG T+ Y RWRSCA+ +V F P V IDKSSTA+ GF RAGW +VCFFH I+A LKNL+++LG K+H ++ FD AIR++MRA E Y+ AL LLA VE WG LG D YL A+G GTLWEG GD V G T N ESHF + + +F+ LNG + RL +FLGV GE GR +Y++ F+ + R G RV+ E +R VNG WL+ GKV R R G T W+ V V N + P E PD + + D+L ++ +DG Y+VG+ +P +V+TC C + RRG H LCKH +AA+A E AA +E Q++ +M ER + A TDH LY ACR W VRAIL EG R A + +T+T+AAGV C++ E + + A+L++ A + W P + R L A D+V+ V + I D SAR AQ +AD Sbjct: 507 LSTYNFLAGNHRMFPVSQEDSRELGVEHTAAGNKTGVGKHRIDNRYTLSPAGRELVALGKLNRQVFRLLLHCAGGS---GGSGANCRKNPGAKGQWCAAAAGDGSCAPGCTW---RRGANHHCAVEVRVTATIAQVLKHTVQLQITGRHTADGVVPVPVDLQKLDLSLIFDDYIRNTCQAGAVCRSKAIRDALALVPQGARLTGRCHLGRIHYSNVVSYAARLTCSAVPGTFTAFDAVVRQHALSMATPLPNGVIALYYRAESGEKMQLVLSSEKALDALRDKSVQFVLSDTNWKAAPQKPAFSVIGCPVPLPVGGFRPLVASISNTEDGDSTFFMAEALQLAVPCCATCDHEWKEGWTDGTYRRWRSCAKD----------------------------SVTPFRPTVGIDKSSTAQAGFRRAGWSISVCFFHSIKAMLKNLKEKLGSKKHWLIPFFDDAIRMVMRAQTAEVYKRALDALLATVESWGTRGYLGADPAD--FISYLKTAMGFEGTLWEGTQGDFRARDVEGLENTTNNVESHFLSVQKTIFYCNLNGTYARLAPLFLGVRADGE---GRPVSYFDTFERAMAARAKEGKGRVKSVELQRLVNGRWLHATGKVQRRRHTGGHVGTRWYLVNKEVPNVAKSPLPAAVASXXXXXXXXGTAETLPDS---FNVDTELNDILYEVEA-AGIKAEDGHYVVGIVSEP-GRSDVITCICPDFWRRGGTHSLCKHAVAAVAYEEEHAATGAAAKRRVVELQRKHIMDYFMITERNKPRAATDHELYDACRAGEWARVRAILEEGPRPRRSLGDRDDATTIATRYTLTLAAGVWCNVGFERVCDKVRAELDLP---AATYVVRNGYAAQYEWTPKIRPKRDLCAGDIVFSVSTAADEVLIVDDASARDAQLLVAD 1377
BLAST of jgi.p|Trimin1|349972 vs. uniprot
Match: A0A835YUM4_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUM4_9STRA) HSP 1 Score: 425 bits (1092), Expect = 1.130e-122 Identity = 321/918 (34.97%), Postives = 444/918 (48.37%), Query Frame = 1 Query: 13 YKFLAGKTAPCNVSDKDKRPLVTVHAAPTNNARIGGHRPDNTLELTEVGVDFAKAGRMDNQAFRMTLHCAGPLRRGQASGANCWRNPAGGRWCASTTRECEPGCKWLLNTKQAGHRCSVSLLITATIEQVVAKQMQVCIRGQHTGGNVAAVPVARLQRTLSRLTQDSIRSQYLAAPTSRTRAVMEAKAKIPVGEEVTGRNMPVHTRVSGMRTYSAAKHSSPLAGPFVGFNDTVTRFCLSLARPLASGCEVLYYKYEPGGILQLIFTKREALAVLAAQPVDFLVSDSKFDTAGEKPAFTMLGFPLPDRQGMQPLVGSISSMEDGDTTYRIARALQWAMPCRPNCTHGWEEGRTED-EYIRWRSCARKRAEXXXXXXXXXXXXXXXXXXXXGGMRANVDRFAPMVQIDKSSTAREGFTRAGWKTAVCFFHLIRATLKNLEQRLGK-------------RHQMLRHFDRAIRLLMRA-AKERYQEALTVLLAMVEQWG--KADLLGDANTDNNLCKYLFEALGGAGTLWEGMIGDAVGEGVRGFCGTNNYSESHFRVLDECLFFGRLNGRFQRLLEVFLGVTGTGERALGRTYYELFDHLLQQRQLAGGSRVRCAERRRAVNGSWLNCLGKVARPRGGP----GGGDTEWFFVEAGVKNAIEPAT----PRRQMEPQPDKVPLLDANAVFADLLAVIKPDRAPNPQDGCYLVGVRLDPLTEKEVVTCTCAMYNRRGNRHDLCKHGLAALACREVERRG-----EAALEEQQQCVMQSCGNAERARSAATTDHNLYKACRESNW-RVVRAILLEGRCARGGAALVVHTVTIAAGVACDIELEEASEAMCAQLEITDDEPAFLIWSGAVRGGCSWQPALPKARSLHANDVVY---RVGNIEITDIMSARAAQAALADKAEIFM 2664 Y L KT C VS++D RPLV H +G DN LT G + GR QAFR TLHCAG G+ +GANC RNP GG+WC C PGC W + H C VS ITA+++QV +Q+ I GQHT G A V R S + IR A + + + A P G +G ++S Y K + G F G N + CLS+A PL+SG VLY++ +PGG+ L+ T AL +L + F VSD+K+DT + AFT++G +P G++PLV IS++E+ TT +A AL A PC P+C H W+ GR +D Y RWR+C N F+PMV IDK++ + + F AGW+ + CFFH +R+ L+ L + K + ++ D+ IRL++R+ + E+Y+E L +LL VE WG K LG A + YL + +GGA W +GD +G V G+ T N E F V+D CLF+G+ F+ LLE+ LG+T G+R G Y++LF L + ++ GG R+R E +R NG W+ L K R P G TEW+FV GV T P+ E + DA F L+ + D P Q Y VG+R P ++ C+C Y RRGN HD CKH +AALA +E E +A +E Q VM + E + + LY ACRE NW R +A+ R A A H V IA G C + L+E SE +C +L++ D A+LI G V C PK R + VV RVG+ E+ + R AA A +A+I++ Sbjct: 389 YNHLTDKTRLCTVSEQDARPLVQEHL------HLGKRGIDNVRTLTAAGEELRAGGRGSRQAFRTTLHCAGGTSAGKPNGANCQRNPCGGKWCDGVGA-CAPGCTW---KRGPNHNCRVSYEITASVDQVHLGIVQLRIVGQHTTG-YAPKGVDPSCRAKSVHAKRVIRDVDSAGQQTLFQFRAQLAALAPEGSARSGLFHQRPAQLSNALAYVRRKRGNRGVGVFTGINAMIRGKCLSIAVPLSSGVIVLYFRSKPGGLWHLVVTTPAALDILRDPNIRFFVSDTKWDTNPQHFAFTIIGCVMPGG-GLRPLVIGISNIENAKTTLAMAEALTIAAPCGPDCQHPWKHGRKKDGTYHRWRACP------------------------------NPPPFSPMVAIDKAAGSLKAFKAAGWRVSTCFFHNVRS-LRELHFKKRKAVEDGDTPYEKPRKEPVIEALDKLIRLVIRSHSAEQYEERLALLLDTVEDWGSDKKRWLGTATPTADFVNYLRQYMGGA---WGETMGDYIGHDVPGYEATTNSGERSFGVVDMCLFYGKRCHSFRYLLELVLGITADGKRTRGTAYFDLFQQLWEDKE-EGGRRLRTVELQRQCNGRWIY-LQKHGVKRPAPHQRTGANGTEWYFVRNGVCPIAVSRTGAISPQPAAEVEDGAFDPTDAIEAFYALIE--EQDPPPPRQWSYYPVGMRTTP-GGAPIIWCSCEDYFRRGNTHDPCKHAVAALAYKEEEEASGAEQKQAVVETHQHHVMSYIKHVEHKKPDKNME--LYLACRELNWVRARKALRSAKRTAAAAPAAAPHDVVIAPGTVCTVGLDEVSEDVCDELKLQGD--AYLISHGEV---CD-----PKYRERIGDIVVSVSRRVGDAEVETL---RLDSAAAATQAQIWL 1240
BLAST of jgi.p|Trimin1|349972 vs. uniprot
Match: A0A836CCV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCV7_9STRA) HSP 1 Score: 393 bits (1010), Expect = 4.960e-111 Identity = 316/914 (34.57%), Postives = 440/914 (48.14%), Query Frame = 1 Query: 4 VTEYKFLAGKTAPCNVSDKDKRPLVTVHAAPTNNARIGG--HRPDNTLELTEVGVDFAKAGRMDNQAFRMTLHCAGPLRRGQ--ASGANCWRNPAGGRWCASTTRECEPGCKWLLNTKQA-----GHRCSVSLLITATIEQVVAKQMQVCIRGQHTGGNVAAVPVARLQRTLSRLTQDSIRSQYLAAPTSRTRAVMEAKAKIPVGEEVTGRNMPVHTRVSGMRTYSAAKHSSPLAGPFVGFNDTVTRFCLSLARPLA-----SGCEVLYYKYEPGGILQLIFTKREALAVLAAQPVDFLVSDSKFDTAGEKPAFTMLGFPLPDRQGMQPLVGSISSMEDGDTTYRIARALQWAMPC-RPNCTHGWEEGRTED--EYIRWRSCARKRAEXXXXXXXXXXXXXXXXXXXXGGMRANVDRFAPMVQIDKSSTAREGFTRAGWKTAVCFFHLIRATLKNLEQRLGKRHQMLRHFDRAIRLLMRA-AKERYQEALTVLLAMVEQWGKADLLGDANTDNNLCKYLFEALGGAGTLWEGMIGDAVGEGVRGFCGTNNYSESHFRVLDECLFFGRLNGRFQRLLEVFLGVTGTGERALGRTYYELFDHLLQQRQLAGGSRVRCAERRRAVNGSWLNCLGKVARPRGGPGGGDTEWFFVEAGVKNAIEPATPRRQMEPQPDKVPLLDA-NAVFADLLAVIKPDRAPNPQDGCYLVGVRLDPLTEKEVVTC-TCAMYNRRGNRHDLCKHGLAALACREVERRGEAALEEQQQCVMQSCGNAERARSAATT-DHNLYKACRESNWRVVRAILLEGRCARGGAALVV---HTVTIAAGVACDIELEEASEAMCAQLEITDDEPAFLIWSGAVRGGCSWQPALPKARSLHANDVVYRVGNIEITDIMSARAAQAALADKAEIFMKRI 2673 +T FLAGK + K+ LV V T +A+ G HRPD+ LTE G G+ D Q LHC G R G ASGANC R+P G++C+STT CE GC W T + GH C ++ITAT QV + +Q+ G+HT + +PVA + T+S ++ I A P R+ +A +P G T R +P ++ M Y +AG F + ++ LSL+ PL G VL+Y+ +Q++ T EAL A F++SD+K DT+ + + P P G PLV SISS E+G TT ++A +LQ A+PC P C H + E + D +Y RWR CA D F PMV IDKSST R+ F G T+VC FH +A +KNL+ + ML FD+ + +L RA E Q L +L MV WG+A LLG A D+ + YL EALG AGT W+G +GD VG V G TNN +E HFR+LD CL + F L+E+ LGVT G +Y+ Q R+L GG+R RR+++G WLN +G V PGG ++F+V AGV+ + Q + + L + +A L ++KP AP + G Y+V DP+ + TC C+ + RGN D C+H A A + G+ QQ V ER +S D LY SNW V++ LL G AA TVT+AAGVACDI L + + M L + D + I G + GG W P LP AR + +D++ RVG++++ +A AA+ L D + I + R+ Sbjct: 589 ITLTNFLAGKI-------EVKKNLVEVS---TVDAKDPGSKHRPDDIYRLTEEGQQDLADGK-DLQVLSYNLHCGGGNRGGVDGASGANCARDPCKGKYCSSTTGSCEEGCAWAAMTSKKRGGRPGHYCRFRMVITATSSQVDRRVIQLLTVGEHTR-DTEWIPVAADRLTMSLPLRNDIIRLARAGPAQRSTIAAQAAIALPDGLAATSRTVPRRDEMTQMVAYDRKLSHGKIAGSFTAVDSSIGARHLSLSSPLPPNINRDGVIVLFYRSGADRTMQIVVTTPEALTDAHAHARSFVMSDAKHDTSDTHAPWANILCPAPGG-GTLPLVVSISSTENGLTTAQMALSLQMAVPCGNPACMHPFVEETSIDGSDYQRWRPCA------------------------------TTDLFVPMVGIDKSSTLRDAFASVGMTTSVCVFHNFQAIIKNLQTKKNVPRDMLAVFDKVLHVLFRAQTAEVCQSMLGAVLDMVRAWGEAKLLGKAPIDD-VINYLQEALGLAGTAWQGTMGDFVGLNVTGHQSTNNSAELHFRLLDRCLLQDTASTNFVDLVELVLGVTAGGATTQHMSYFRFMTLQRQDRELKGGARTAGDVLRRSLDGRWLNLIGHVTPAA--PGG---KYFYVTAGVQRITRDS----QAQGLRETARLRETTSADLTTLYQMLKPVDAPAERAGFYIV----DPVAD----TCFLCSDFQWRGNSSDGCQHIHAGKAF--IGAYGDVTA--QQTRVQAYVYQMERRKSVGVPRDDVLYDTA--SNWEQVKSQLLLGVATAAPAAPAPPSEFTVTLAAGVACDILLRQVTAVMRENLGLED---VYSIARGCIAGG-KWVPELPHARDMLPHDIILRVGDVDVVSDATATAARVQLMDTSSIRVMRV 1431
BLAST of jgi.p|Trimin1|349972 vs. uniprot
Match: A0A835YZU1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZU1_9STRA) HSP 1 Score: 346 bits (888), Expect = 7.980e-98 Identity = 286/913 (31.33%), Postives = 423/913 (46.33%), Query Frame = 1 Query: 4 VTEYKFLAGKTAPCNVSDKDKRPLVTVHAAPTNNARIGGHRPDNTLELTEVGVDFAKAGR-----------MDNQAFRMTLHCAGPLRRGQ--ASGANCWRNPAGGRWCASTTRECEPGCKWL-LNTKQAG---HRCSVSLLITATIEQVVAKQMQVCIRGQHTGGNVAAVPVARLQRTLSRLTQDSIRSQYLAAPTSRTRAVMEAKAKIPVGEEVTGRNMPVHTRVSGMRTYSAAKHSSPLAGPFVGFNDTVTRFCLSLARPLAS-----GCEVLYYKYEPGGILQLIFTKREALAVLAAQPVDFLVSDSKFDTAGEKPAFTMLGFPLPDRQGMQPLVGSISSMEDGDTTYRIARALQWAMPCR-PNCTHGW-EEGRTEDEYIRWRSCARKRAEXXXXXXXXXXXXXXXXXXXXGGMRANVDRFAPMVQIDKSSTAREGFTRAGWKTAVCFFHLIRATLKNLEQRLGKRHQMLRHFDRAIRLLMRAAKER-YQEALTVLLAMVEQWGKADLLGDANTDNNLCKYLFEALGGAGTLWEGMIGDAVGEGVRGFCGTNNYSESHFRVLDECLFFGRLNGRFQRLLEVFLGVTGTGERALGRTYYELFDHLLQQRQLAGGSRVRCAERRRAVNGSWLNCLGKVARPRGGPGGGDTEWFFVEAGVKNAIEPATPRRQMEPQPDKVPLLDANAVFADLLAV---IKPDRAPNPQDGCYLVGVRLDPLTEKEVVTC-TCAMYNRRGNRHDLCKHGLAALACREVERRGEAALEEQQQCVMQSCGNAERARSAATTDHNLYKACRESNWRVVRAILLEG---RCARGGAALVVHTVTIAAGVACDIELEEASEAMCAQLEITDDEPAFLIWSGAVRGGCSWQPALPKARSLHANDVVYRVGNIEITDIMSARAAQAALAD 2646 +T+ F AGK + + VH + + HR D+ LT+VG + R D Q F M HC G RRG ASG+NC R+P G R+CAST+ CEPGC W L TK+ H CS + ++AT+ QV +Q+ I GQHT + +P A + ++S +D++ A P R+ V +A +P G T RN+P+ +V+ + Y +AG F + + L LA PL + G VL+Y+ +QL+ + +AL +SD+K DT+ F + P P G PL S+SS E+ TT ++A +L+ A+ C P C H + E+ + Y RWR CA ++ FAP V IDKS+T+R+ F G++T VC FH + A +++L+ ML F++AI LL RA YQ L V + +V +WG A LG A+ D+ + YL +ALG AGT WEG +GD + V G TNN +E HFR++D C+ + +E+ LG T G + +Y+ F ++R+ GG+R+ RR++ G WLN G V ++ +V+AGV+ A + Q +V +DL + +KP P + G Y+V DP+ E TC C+ Y RGN D C H AA A + G A EQQ+ + E+ +SA T N S W VR+ LL G A A V ++VT+ GV C+I L+ + LE+ + + I G++ G +W PAL R + +D+V VG++ I SA AQ L D Sbjct: 43 ITQSNFAAGK----GDFKTELIDIFAVHGMASAVRKTMKHRVDDAYFLTQVGREALARLREHELHAVIPAPKDLQCFSMMSHCNGGARRGVDGASGSNCQRDPFGDRFCASTSGTCEPGCAWAALTTKKKADCRHLCSFRIALSATLSQVERGVIQLRIIGQHTRAE-SWIPPAADKLSMSLTLRDNLIRSARAGPAQRSTIVSQAANNLPAGMAQTSRNVPLRKQVTNVVAYDRRLSRGNVAGSFTAVDVAIRTHHLCLASPLPATANRDGVLVLFYQSGADKTMQLVVSTPQALEDAHLHGRAVALSDAKHDTSDTHAPFATMLCPAPGG-GTLPLAVSLSSTENSSTTAQLALSLRHAVRCSDPECPHSFVEQFGLDGAYRRWRPCATRQL------------------------------FAPTVSIDKSATSRDAFASVGFQTVVCVFHNLVAIIQHLQTVKRAPRAMLAVFEQAIHLLFRAQTSALYQRVLAVFVLIVREWGDAGKLGSASVDD-IVTYLEDALGLAGTGWEGTMGDHIARAVHGLPSTNNAAEVHFRLIDRCILQDTTSTSLLDWVEILLGTTAHGTASPRMSYFGFFSVQRREREAKGGARLAGDILRRSLEGRWLNLNGNVIHAG--------KYCYVKAGVQRITRDAASQTQ------RVAARVRETTGSDLSRLHELLKPLDLPALRSGYYIV----DPVAE----TCFLCSDYIWRGNARDACAHVHAAKAF--IGEYGNIA--EQQRRLHTYAHQIEKKKSA-TVPRNAVLYDTTSTWEAVRSQLLLGPEPTAAATAAQPVEYSVTLREGVECNITLQPVQAIVRTSLELEGN--VYSIARGSITG-VAWSPALKHGRDVLPHDIVLSVGDVAIDSAQSAAHAQVQLMD 888
BLAST of jgi.p|Trimin1|349972 vs. uniprot
Match: A0A835Z8X9_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X9_9STRA) HSP 1 Score: 325 bits (834), Expect = 1.680e-90 Identity = 284/875 (32.46%), Postives = 407/875 (46.51%), Query Frame = 1 Query: 121 HRPDNTLELTEVGVDFAKAGR-----------MDNQAFRMTLHCAGPLRRGQ--ASGANCWRNPAGGRWCASTTRECEPGCKWLLNT--KQAGHR--CSVSLLITATIEQVVAKQMQVCIRGQHTGGNVAAVPVARLQRTLSRLTQDSIRSQYLAAPTSRTRAVMEAKAKIPVGEEVTGRNMPVHTRVSGMRTYSAAKHSSPLAGPFVGFNDTVTRFCLSLARPLA-----SGCEVLYYKYEPGGILQLIFTKREALAVLAAQPVDFLVSDSKFDTAGEKPAF-TMLGFPLPDRQGMQPLVGSISSMEDGDTTYRIARALQWAMPCR-PNCTHGW-EEGRTEDEYIRWRSCARKRAEXXXXXXXXXXXXXXXXXXXXGGMRANVDRFAPMVQIDKSSTAREGFTRAGWKTAVCFFHLIRATLKNLEQRLGKRHQMLRHFDRAIRLLMRAAKER-YQEALTVLLAMVEQWGKADLLGDANTDNNLCKYLFEALGGAGTLWEGMIGDAVGEGVRGFCGTNNYSESHFRVLDECLFFGRLNGRFQRLLEVFLGVTGTGERALGRTYYELFDHLLQQRQLAGGSRVRCAERRRAVNGSWLNCLGKVARPRGGPGGGDTEWFFVEAGVKNAIEPATPRRQMEPQPDKVPLLDANAVFADLLAV---IKPDRAPNPQDGCYLVGVRLDPLTEKEVVTC-TCAMYNRRGNRHDLCKHGLAALACREVERRGEAALEEQQQCVMQSCGNAERARSAATTDHNLYKACRESNWRVVRAILLEGR--CARGGAAL-VVHTVTIAAGVACDIELEEASEAMCAQLEITDDEPAFLIWSGAVRGGCSWQPALPKARSLHANDVVYRVGNIEITDIMSARAAQAALAD 2646 HR D+ LT+ G R D F ++HC G RRG AS ANC R+ G R+C+STT C PGC W T K+AG+R C+ ++++AT+ QV +Q+ I GQHT N+ VP A + ++S +D + A P R+ V +A+ + G T R +P+ +V+ + Y +AG F + + L LA PL G VL+Y+ +QL+ + R+AL +SD+K DT+ F TML L G PL S+SS E+ TT ++A +L+ A+ C P C H + E+ + Y RWR+CA + + FAP V IDKS+T++ F G T VC FH + A +KNL+ ML F++AI LL RA YQ L LL +V +WG A L +A+ D+ + YL EALG AGT WEG +GD + V G TNN ESHFR++D C+F F L+E+ LG T G + +Y+ F ++R+ G+R+ RR++ G WL CL P G ++++V+AGV+ A + Q +V +DL + +KP P + G Y+V DP+ E TC C+ Y RGN D CKH AA A G E +Q+ +QS + + N S W VRA LL G A AAL VV++VT+ GV C+I L+ + LE+ D + I G++ G +W PAL R + +D+V + IT SA AQ L D Sbjct: 78 HRVDDIYFLTDEGRQALARLREHELHAVIPAPKDLLCFTFSMHCNGGARRGVDGASQANCERDSCGDRFCSSTTGTCAPGCAWATFTTKKKAGYRHLCAFRVVLSATLTQVDRGVVQIRITGQHTR-NLEWVPPASDKLSMSLSVRDDLIRSARAGPAQRSNIVAQAEMLLN-GLANTSRTVPLRGQVTNVIAYDRRLSRGNVAGSFTAVDVAIRTHHLCLASPLPVTANRDGVIVLFYQSGADKTMQLVVSTRQALEDAHLHARKVALSDAKHDTSTTHAPFATMLC--LAPGGGTLPLAVSLSSTENSSTTAQLALSLKMAVRCSDPACPHTFLEQFGPDGAYRRWRACATR------------------------------EPFAPTVSIDKSATSQAAFANVGMATVVCVFHNMAAIIKNLQMAKRVPRAMLAVFEQAIHLLFRAQTSALYQSMLYALLLIVREWGDAGKLRNASVDD-VVTYLEEALGLAGTGWEGTMGDHIARDVPGIPTTNNQCESHFRLMDRCIFQEVTTTSFVDLVEILLGTTPHGTASPRLSYFGFFGLQRKEREANRGARIAGDILRRSLEGRWL-CLTANVIPAG-------KYYYVKAGVQRITRDAASQTQ------RVAARIRETTGSDLSRLHEMLKPLDLPALRSGYYIV----DPVVE----TCFLCSDYIWRGNARDACKHVHAAKA-----HMGAYGGEAEQRARIQSYVHYIEKKKPVGIPRNAVLYDTASTWEAVRAQLLLGPEPAAPAAAALPVVYSVTLGEGVECNITLQPVQAIVRNSLELEGD--VYSIARGSITG-VAWSPALKHGRDVLPHDIVLSADGVAITSAESAAHAQMQLMD 887
BLAST of jgi.p|Trimin1|349972 vs. uniprot
Match: A0A836CHP0_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHP0_9STRA) HSP 1 Score: 242 bits (617), Expect = 6.430e-63 Identity = 173/506 (34.19%), Postives = 239/506 (47.23%), Query Frame = 1 Query: 835 AAQPVD-FLVSDSKFDTAGEKPAFTMLGFPLPDRQGMQPLVGSISSMEDGDTTYRIARALQWAMPCRPNCTHGWEEGRTEDE--YIRWRSCARKRAEXXXXXXXXXXXXXXXXXXXXGGMRANVDRFAPMVQIDKSSTAREGFTRAGWKTAVCFFHLIRATLKNLEQRLGKR-----------------------HQMLRHFDRAIRLLMRA-AKERYQEALTVLLAMVEQWGKADLLGDANTDNNLCKYLFEALGGAGTLWEGMIGDAVGEGVRGFCGTNNYSESHFRVLDECLFFGRLNGRFQRLLEVFLGVTGTGERALGRTYYELFDHLLQQRQLAGGSRVRC-AERRRAVNGSWLNCLGKVARPR-----GGPGGGDTEWFFVEAGVKNAIEPATPRRQMEPQPDKVPL--------------------LDANAVFADLLAVIKPDRAPNPQDGCYLVGVRLDPLTEKEVVTCTCAMYNRRGNRHDLCKHGLAALACREVE 2193 AA+P + F VSD+K+ T +K AFT++G +P+ GMQPL SIS+ E+ DTT+ +A+ L+ A PC +C H W E +D+ Y R R C M F MV IDKSS +R+ F RA W + CFFH IRAT+KN+E++L + H MLR FD +R+L+ + + + Y L + L M+EQW K LG + Y+ + GG W +GD +G GV G+ TNN ES F ++D+CL FG++ RF L+E+ LGVT G +G +Y+ +F LL +R+ G VR E++R N WL V RP GP G +EW+ V A EP P P+ D F +L +P P DG Y VG+R P + +VTC C Y RGN HD CKH +AA+ +EVE Sbjct: 141 AARPQNQFFVSDTKWTTCPQKCAFTVIGAMVPE--GMQPLALSISNEENEDTTFILAKTLENAAPCGEDCRHEWHEEWVDDKAAYYRKRRCR---------------------------MVTPPLAFPVMVGIDKSSMSRKAFLRARWLVSCCFFHNIRATMKNIEKKLQSKKRKADEGGDPGAEEHVAYKKAEPHPMLRAFDLCLRILLHSQSADEYNRKLEIFLDMIEQWWKNGWLGKTTPLADWISYIKQYFGGR---WGDAMGDHIGHGVPGYAATNNAVESGFLIVDKCLLFGKMCSRFTYLIELVLGVTADGTPTMGPSYFPMFKRLLSERKRHGRKVVRRPVEKQRDCNARWLLLEEFVKRPEHPLDPAGPEG-PSEWYLVRAREGAIAEPKKPPAPAAPKGKXXXXXXXXXXXXXXXXXXXXXKGQFDPTTAFDELFRASEPADIP-VADGFYAVGMRDGPGGAR-IVTCICRDYYHRGNSHDNCKHAIAAILYKEVE 611
BLAST of jgi.p|Trimin1|349972 vs. uniprot
Match: A0A835YYN2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYN2_9STRA) HSP 1 Score: 112 bits (279), Expect = 4.500e-21 Identity = 109/410 (26.59%), Postives = 176/410 (42.93%), Query Frame = 1 Query: 1537 WEGMIGDAVGEGVRGFCGTNNYSESHFRVLDECLFFGRLNGRFQRLLEVFLGVTGTGERALGRTYYELFDHLLQQRQLAGGSRVRCAERRRAVNGSWLNCLGKV-ARPRGGPGGGDTEWFFVEAGVKNAIEPATPRRQMEPQPDKVPLLDANAVFADLLAV---IKPDRAPNPQDGCYLVGVRLDPLTEKEVVTCTCAMYNRRGNRHDLCKHGLAALACREVERRGEAALEEQQQCVMQSCGNAERARSAATTDHNLYKACRESNWRVVRAILLEGRCARGGAALVV-------HTVTIAAGVACDIELEEASEAMCAQLEITDDEPAFLIWS-GAVRGG--CSWQPALPKARSLHANDVVYRVGNIEITDIMSARAAQAALADKAEIFMKRIDAIMACMDAHKESPRIM 2724 W +GD + +G+ TNN +ESHFR++D C+F L+G L+E+ LGV G+ + TY+ F ++R+ AGG++++ R++ G WL+ +G V A GG G + V+AGV + + A + A+ + P P P+DG Y V D + C Y GNR C+H A A + G+AA + + + Q C ER + A + + W VR LL R AA ++ + VTI AGV C++ L + + + PA + + G RG W PAL R L D++ V + + A+AAQ L + A + + ++ M +E+P ++ Sbjct: 692 WAHSMGDFIADGIASHQITNNSAESHFRLIDRCIFQDVLSGSLADLVEIVLGVDARGQASRKTTYWGFFRMQREEREWAGGAKLKGDVLHRSLEGRWLSLMGHVEAAEEGGREG----LYRVKAGVDRITRSSAEXXXXXXXXXXXXXXXXXELRAQMRALTDALLPPDLPPPRDGWYTVDAAAD-------ICYLCEDYLWAGNRRGGCRHLHAVRA--HLGHYGDAASQAAR--ISQYCWQVERRKQAWQPRDPVLYQLPHAPWEQVRERLLLPRDQAESAASLLNEGTPVEYAVTIPAGVKCNVSLAKVPRSTVDAIGF----PAGVYYHFGRGRGAEETRWSPALRVERGLIPQDIILSVCGLPVDSPQRAQAAQVLLDNAAAERVLAVVPVLKTMS--REAPTLL 1080 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349972 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_9986 ID=mRNA_9986|Name=jgi.p|Trimin1|349972|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4026bp|location=Sequence derived from alignment at Contig_52:851886..858663- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGTCACCGAGTACAAGTTCCTGGCGGGCAAGACGGCGCCGTGCAATGTback to top protein sequence of jgi.p|Trimin1|349972 >Trimin1|349972|estExt_Genemark1.C_Ctg_520093 ID=Trimin1|349972|estExt_Genemark1.C_Ctg_520093|Name=jgi.p|Trimin1|349972|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1342bp MVTEYKFLAGKTAPCNVSDKDKRPLVTVHAAPTNNARIGGHRPDNTLELTback to top mRNA from alignment at Contig_52:851886..858663- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_9986 ID=mRNA_9986|Name=jgi.p|Trimin1|349972|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6778bp|location=Sequence derived from alignment at Contig_52:851886..858663- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_52:851886..858663- >mRNA_9986 ID=mRNA_9986|Name=jgi.p|Trimin1|349972|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=4026bp|location=Sequence derived from alignment at Contig_52:851886..858663- (Tribonema minus UTEX_B_3156 )back to top |