mRNA_9961 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|167656
Unique NamemRNA_9961
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A835YYE4_9STRA (Armadillo-type protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYE4_9STRA)

HSP 1 Score: 398 bits (1022), Expect = 7.520e-136
Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 1 
Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 999
            GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM
Sbjct:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 333
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BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: D7FWZ0_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWZ0_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 5.150e-77
Identity = 265/333 (79.58%), Postives = 282/333 (84.68%), Query Frame = 1 
Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 999
            GHTVQFCRDQHGSRFIQQKLEV+++ +K AFF E++PH QSLM                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VV  TAK EG YLHSHIQFIID F+GQVEKLS HAYGCRVIQRILEHCID Q+  +LEEI++SFS LIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LI HL +GH++G  SLLQVMVCDPYANYVVQKIIDVAD EQR+ II EI+AHAAQLKRYTFGKHIISRLEK+SGKKM
Sbjct:  212 GHTVQFCRDQHGSRFIQQKLEVSTDEDKEAFFNEILPHTQSLMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSTTAKTEGQYLHSHIQFIIDGFVGQVEKLSMHAYGCRVIQRILEHCIDEQKQVILEEIKDSFSVLIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIQHLLYGHSDG-TSLLQVMVCDPYANYVVQKIIDVADQEQRQTIIMEIKAHAAQLKRYTFGKHIISRLEKLSGKKM 543
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BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A6H5KS31_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS31_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 6.420e-63
Identity = 252/333 (75.68%), Postives = 268/333 (80.48%), Query Frame = 1 
Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 999
            GHTVQFCRDQHGSRFIQQKLEV+++ +K AFF E++P                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VV  TAK EG YLHSHIQFIID F+GQVEKLS HAYGCRVIQRILEHCID Q+  +LEEI+          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LI HL +GH++G  SLLQVMVCDPYANYVVQKIIDVAD EQR+ II EI+AHAAQLKRYTFGKHIISRLEK+SGKKM
Sbjct:  507 GHTVQFCRDQHGSRFIQQKLEVSTDEDKEAFFNEILPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVSTTAKTEGQYLHSHIQFIIDGFVGQVEKLSMHAYGCRVIQRILEHCIDEQKQVILEEIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIQHLLYGHSDG-TSLLQVMVCDPYANYVVQKIIDVADQEQRQTIIMEIKAHAAQLKRYTFGKHIISRLEKLSGKKM 838
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BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A1V9YTD6_9STRA (PUM-HD domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YTD6_9STRA)

HSP 1 Score: 178 bits (452), Expect = 1.040e-46
Identity = 189/335 (56.42%), Postives = 228/335 (68.06%), Query Frame = 1 
Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHS--HIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 999
            GH V+F +DQHGSRFIQQKLE A    K   F E+ P A SLMTDVFGNYVIQK FD+G P+    L          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++   A A G++  S     FI+ AF+G V  L+TH YGCRVIQR+LE+C +AQ  P+L+EI +    L++DQXXXXXXXXXXXXXXXXXXXXXXX                                 ++ H+   +  G+  L QVM+ D YANYVVQK+IDVADAE+RE ++  I+  A+ LKR+ FGKHI++RLEK++G+K+
Sbjct:  462 GHIVEFAKDQHGSRFIQQKLETAKADIKDIVFSEIYPVALSLMTDVFGNYVIQKFFDYGNPEHLLLLLRTITGRVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILPWKASASGSHQRSIERGNFILSAFVGNVYSLATHPYGCRVIQRVLENCSEAQMAPILKEIHDCCCLLVEDQXXXXXXXXXXXXXXXXXXXXXXXKVYPDIVRFSYHKFASNVIEKCLMYASVNQLHVIVQHVMEPNEHGECPL-QVMMKDQYANYVVQKLIDVADAEEREQMVVIIKTQASHLKRFNFGKHILNRLEKLTGQKI 795
[Close]
BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A6G0XDT3_9STRA (PUM-HD domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XDT3_9STRA)

HSP 1 Score: 173 bits (439), Expect = 4.280e-45
Identity = 126/333 (37.84%), Postives = 162/333 (48.65%), Query Frame = 1 
Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 999
            GH V+F +DQHGSRFIQQKLE A    K   F EV P A +LMTDVFGNYV+QK FDHG PD    L                                                             EV+     +   Y+     F++ AF G V  ++TH YGCRVIQR+LEHC D Q   +L EI+++ S L++DQ XXXXXXXXXXXX                                           ++ H+    ++G+  L QVM+ D YANYVVQK+IDVADA +R+ ++  I+  A  LKR+TFGKHI++RLEK++G KM
Sbjct:  406 GHIVEFAKDQHGSRFIQQKLETAKTDIKDIVFSEVFPVALALMTDVFGNYVVQKFFDHGNPDHVLQLMHIINGRMIDLALQMYGCRVIQKALESDYHAEKLELICELEGQVLRCVKDQNANHVVQKCIEVLPWKDPSASRYIE-RASFLLAAFEGNVYSMATHPYGCRVIQRVLEHCSDVQMATILVEIQDACSLLVEDQYXXXXXXXXXXXXQPAERSALINKIYPDIVRFSYHKFASNVIEKCLMYASVEQLHVIMRHVMDA-SDGECPL-QVMMKDQYANYVVQKLIDVADASERDKMVAIIKTQATLLKRFTFGKHILNRLEKLTGYKM 735
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BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A024UJZ7_9STRA (PUM-HD domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UJZ7_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.740e-44
Identity = 110/333 (33.03%), Postives = 145/333 (43.54%), Query Frame = 1 
Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 999
            GH V+F +DQHGSRFIQ KLE A    K   F EV P A  LMTDVFGNYVIQK FDHG P     L                                                               +            S   F++++F   V+ +STH YGCRVIQR+LE C D Q  P+L EI++S+  L+ DQ                                                        ++HH+ +    G+  L Q+M+ D YANYVVQK+IDVAD+ +R+ +   I++HAA LKRYT GKHI++RLEK++G+K+
Sbjct:  474 GHIVEFSKDQHGSRFIQLKLETAKPDIKDIVFSEVAPVALQLMTDVFGNYVIQKFFDHGNPQHITQLMRVIQGHMLDLALHMYGCRVIQKALESTDDLDLKLDLICELQGHVLHCIKDQNGNHVIQKCIEILPWKVPSVVEDMSRASFLLESFENNVDTMSTHPYGCRVIQRVLEKCSDEQMAPILREIQDSYGLLVNDQYGNYVIQHVLQHGPPSQRTALINRIYPDIIRFSYHKFSSNVIEKCLSYASVKQLRVIMHHILNSSDNGECPL-QIMMKDQYANYVVQKLIDVADSTERDKMAAIIKSHAANLKRYTHGKHILNRLEKLTGQKI 805
[Close]
BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A067D2Q5_SAPPC (PUM-HD domain-containing protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067D2Q5_SAPPC)

HSP 1 Score: 166 bits (420), Expect = 2.250e-42
Identity = 187/336 (55.65%), Postives = 222/336 (66.07%), Query Frame = 1 
Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVV---CATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 999
            GH V+F +DQHGSRFIQQKLE A    K   F E+ P A +LMTDVFGNYVIQK FD G       L          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ++      A   G        FI+ AF+G V  L+TH YGCRVIQR+LEHC +AQ  P+L+EI +    L++DQXXXXXXXXXXXXXXXXXXXXXXXX                                ++ H+   +  G+  L QVM+ D YANYVVQK+IDVADAE+RE ++  I+  A+ LKR+ FGKHI++RLEK++G+K+
Sbjct:  444 GHMVEFAKDQHGSRFIQQKLETAKADIKDIVFAEIYPVALTLMTDVFGNYVIQKFFDFGTSHHLSLLLRTISGRVLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILPWKTPVAMDVGG-------FILSAFLGNVYSLATHPYGCRVIQRVLEHCTEAQMAPILKEIHDCCCLLVEDQXXXXXXXXXXXXXXXXXXXXXXXXVYPDIVRFSYHKFASNVIEKCLMYASVHQLHVIVAHVMEANERGECPL-QVMMKDQYANYVVQKLIDVADAEERERMVVIIKTQASHLKRFNFGKHILNRLEKLTGQKI 771
[Close]
BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A485KZD8_9STRA (Aste57867_13784 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZD8_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.260e-42
Identity = 177/333 (53.15%), Postives = 220/333 (66.07%), Query Frame = 1 
Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEKISGKKM 999
            GH V+F +DQHGSRFIQ KLE A    K   F E+ P A +LMTDVFGNYVIQK FDHG  +    L               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E++         Y+     F++ +F+G V  ++TH YGCRVIQR+LE+C DAQ  P+L EI+++ + +++D XXXXXXXXXXXXXXXXXXXXXXXXXX                              ++ H+  G +      LQVM+ D YANYVVQK+IDVADA +R+ + + I+  A+ LKR+TFGKHI++RLEK++G+K+
Sbjct:  441 GHIVEFAKDQHGSRFIQLKLETAKADIKDIVFSEIFPVALALMTDVFGNYVIQKFFDHGNLEHVMQLMRVIQGRMLDLALQMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEILPWKDATASRYME-RAAFLLASFVGNVSIMATHPYGCRVIQRVLENCSDAQMTPILHEIQDACALMVEDXXXXXXXXXXXXXXXXXXXXXXXXXXXPDIVRFSYHKYASNVIEKCLLYASVDQLRVIMRHVMDGKSPAVECPLQVMMKDQYANYVVQKLIDVADASERDKMASIIKTQASVLKRFTFGKHILNRLEKLTGQKI 772
[Close]
BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A7M5WKX3_9CNID (PUM-HD domain-containing protein n=2 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5WKX3_9CNID)

HSP 1 Score: 164 bits (416), Expect = 2.590e-42
Identity = 185/326 (56.75%), Postives = 214/326 (65.64%), Query Frame = 1 
Query:    4 HTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVE-KLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLE 978
            H V+F +DQHGSRFIQQKLE AS  EK+  F E++  A SLMTDVFGNYVIQK F+ G PDQ+  LA                                          XXXXXXXXXXXXXXXXXX   C  +        + +QFIIDAF GQV   LSTH YGCRVIQRILEHC   Q  P+L E+      LIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LI  + + + +G    L  M+ D YANYVVQK+IDVA+  QR+ ++ +IR H A L++YT+GKHI+++LE
Sbjct:  289 HIVEFSQDQHGSRFIQQKLERASVLEKSMVFNEILTAAYSLMTDVFGNYVIQKFFEFGSPDQKMLLAQRIKGHVLPLALQMYGCRVIQKALETIPCDMPIHGELVRELDXXXXXXXXXXXXXXXXXXXXXCVDS--------NQLQFIIDAFKGQVVYALSTHPYGCRVIQRILEHCTIDQTSPILAELHEHTERLIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIEEVCN-YVDGPHGALYSMMKDQYANYVVQKMIDVAEPLQRKVLMMKIRPHVATLRKYTYGKHILAKLE 605
[Close]
BLAST of jgi.p|Trimin1|167656 vs. uniprot
Match: A0A3Q0RXY2_AMPCI (Pumilio RNA-binding family member 2 n=1 Tax=Amphilophus citrinellus TaxID=61819 RepID=A0A3Q0RXY2_AMPCI)

HSP 1 Score: 164 bits (414), Expect = 2.420e-41
Identity = 185/327 (56.57%), Postives = 215/327 (65.75%), Query Frame = 1 
Query:    1 GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNYVIQKLFDHGGPDQRENLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVCATAKAEGAYLHSHIQFIIDAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREGIITEIRAHAAQLKRYTFGKHIISRLEK 981
            GH V+F +DQHGSRFIQQKLE A+ AE+   F E++  A  LMTDVFGNYVIQK F+ G  DQ+  LA+             XXXXXXXXXXXXXXXXX                              + C   +A        +QFIIDAF GQV  LSTH YGCRVIQRILEHC   Q  P+LEE+      L QDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR  LI  +     +G  S L  M+ D YANYVVQ++ID+A+  QR+ I+ +IR H A L++YT+GKHI+++LEK
Sbjct:  619 GHMVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQKLALATRIRGHVLPLALQMXXXXXXXXXXXXXXXXXQVIVRHLINLDGHVLKCKC-----------IECVQPQA--------LQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSEQLGQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRALLIDEVCC-QKDGPHSALYTMMKDQYANYVVQRMIDMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKLEK 925
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167656 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YYE4_9STRA7.520e-136100.00Armadillo-type protein (Fragment) n=1 Tax=Tribonem... [more]
D7FWZ0_ECTSI5.150e-7779.58PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KS31_9PHAE6.420e-6375.68PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A1V9YTD6_9STRA1.040e-4656.42PUM-HD domain-containing protein n=1 Tax=Thraustot... [more]
A0A6G0XDT3_9STRA4.280e-4537.84PUM-HD domain-containing protein n=2 Tax=Aphanomyc... [more]
A0A024UJZ7_9STRA1.740e-4433.03PUM-HD domain-containing protein n=2 Tax=Aphanomyc... [more]
A0A067D2Q5_SAPPC2.250e-4255.65PUM-HD domain-containing protein n=3 Tax=Saprolegn... [more]
A0A485KZD8_9STRA2.260e-4253.15Aste57867_13784 protein n=1 Tax=Aphanomyces stella... [more]
A0A7M5WKX3_9CNID2.590e-4256.75PUM-HD domain-containing protein n=2 Tax=Clytia he... [more]
A0A3Q0RXY2_AMPCI2.420e-4156.57Pumilio RNA-binding family member 2 n=1 Tax=Amphil... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_52contigContig_52:553909..560084 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|167656|e_gw1.52.93.1
BRITEko00000,ko03029
KEGG koko:K17943,ko:K17944
GOsGO:0000003,GO:0000288,GO:0000956,GO:0001101,GO:0002252,GO:0002376,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0003730,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0006810,GO:0006884,GO:0006950,GO:0006952,GO:0006970,GO:0007049,GO:0007097,GO:0007276,GO:0007281,GO:0007338,GO:0007346,GO:0007610,GO:0007611,GO:0007612,GO:0007635,GO:0008150,GO:0008152,GO:0008285,GO:0008306,GO:0008355,GO:0008361,GO:0009056,GO:0009057,GO:0009414,GO:0009415,GO:0009566,GO:0009605,GO:0009607,GO:0009615,GO:0009628,GO:0009651,GO:0009819,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0009992,GO:0010035,GO:0010468,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019219,GO:0019222,GO:0019439,GO:0019725,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0030104,GO:0030154,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034655,GO:0035046,GO:0035770,GO:0036464,GO:0040019,GO:0042048,GO:0042127,GO:0042221,GO:0042592,GO:0043073,GO:0043170,GO:0043186,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043487,GO:0043488,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045495,GO:0045786,GO:0045787,GO:0045930,GO:0045935,GO:0045995,GO:0046483,GO:0046700,GO:0046907,GO:0048468,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048856,GO:0048869,GO:0048878,GO:0050779,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050890,GO:0050896,GO:0051094,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051445,GO:0051446,GO:0051607,GO:0051640,GO:0051641,GO:0051647,GO:0051649,GO:0051656,GO:0051704,GO:0051707,GO:0051726,GO:0051728,GO:0051729,GO:0055082,GO:0060184,GO:0060255,GO:0060293,GO:0061013,GO:0061014,GO:0061157,GO:0061158,GO:0065007,GO:0065008,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090066,GO:0090304,GO:0097159,GO:0098542,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901700,GO:1903311,GO:1903313,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000241,GO:2000243
Preferred namePUF2
DescriptionmRNA binding
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5099@1|root,KOG1488@2759|Eukaryota
Evalue8.45e-78
Seed ortholog2880.D7FWZ0
Hectar predicted targeting categoryother localisation
TranscriptId167978
TrackFilteredModels1
ProteinId167656
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167656gene_9961Tribonema minus UTEX_B_3156 geneContig_52 553909..560084 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167656Trimin1|167656|e_gw1.52.93.1Tribonema minus UTEX_B_3156 polypeptideContig_52 553909..560084 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_9961_8exon_9961_8Tribonema minus UTEX_B_3156 exonContig_52 553909..554088 -
exon_9961_7exon_9961_7Tribonema minus UTEX_B_3156 exonContig_52 554708..554876 -
exon_9961_6exon_9961_6Tribonema minus UTEX_B_3156 exonContig_52 555309..555378 -
exon_9961_5exon_9961_5Tribonema minus UTEX_B_3156 exonContig_52 556048..556199 -
exon_9961_4exon_9961_4Tribonema minus UTEX_B_3156 exonContig_52 556690..556733 -
exon_9961_3exon_9961_3Tribonema minus UTEX_B_3156 exonContig_52 557384..557500 -
exon_9961_2exon_9961_2Tribonema minus UTEX_B_3156 exonContig_52 558786..558953 -
exon_9961_1exon_9961_1Tribonema minus UTEX_B_3156 exonContig_52 559983..560084 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_9961CDS_9961Tribonema minus UTEX_B_3156 CDSContig_52 559983..560084 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_9961 ID=mRNA_9961|Name=jgi.p|Trimin1|167656|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1002bp|location=Sequence derived from alignment at Contig_52:553909..560084- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGCCACACCGTCCAGTTCTGCCGCGACCAGCACGGCAGCCGCTTCATACA
GCAGAAGCTCGAGGTGGCGAGCGAGGCGGAGAAGGCCGCGTTCTTCGAGG
AGGTCGTGCCGCACGCGCAGTCGCTCATGACGGACGTATTTGGCAACTAC
GTCATCCAGAAGCTGTTTGACCACGGCGGGCCTGACCAGCGTGAGAACCT
CGCGTCGTTCCTCGTCGGCCACGCCGTCCAGCTCTCGCTGCAGATGTACG
GCTGCAGGGTCGTGCAGAAGGCCCTAGAGTTTGCCAGCATTGACACGCTC
ATCGCGCTGGTGAGCGAGTTCAGCGGCCAGGTGATGAAGTGCGTGCAGGA
CCAGAACGGGAACCACGTCATACAGAAGTGCATCGAGGTGGTGTGCGCCA
CCGCCAAGGCCGAGGGGGCGTATCTGCACAGCCACATCCAGTTCATCATC
GACGCATTCATGGGGCAAGTGGAGAAGCTCAGCACGCACGCGTACGGGTG
CCGCGTCATCCAGCGGATACTCGAGCACTGCATCGACGCGCAGCGCGACC
CCGTCCTCGAGGAGATCCGCAACTCCTTCAGCGCGCTCATCCAGGACCAG
TACGGCAACTACGTGATACAGCACGTACTCAAGCACGGCCGCCCATCTGA
CAGGGTGATGCTGATGAACGAGGTGCGCGTCCACCTGCTGCCGTACAGCC
AGCACAAGTTTGCGAGCAACGTTGTGGAGAAGTGCCTGCAGTACGGCACG
CGCGAGGAGCGCGGCGCGCTGATACACCACCTCACGCACGGCCACGCCGA
GGGCCAGGCGAGCCTGCTGCAGGTCATGGTGTGCGACCCGTACGCCAACT
ACGTCGTGCAGAAGATCATCGACGTCGCGGACGCGGAGCAGCGCGAGGGC
ATCATCACGGAGATCCGCGCGCACGCCGCGCAGCTCAAGCGCTACACGTT
CGGCAAGCACATCATCTCGCGCCTCGAGAAGATCTCGGGCAAGAAGATGT
GA
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protein sequence of jgi.p|Trimin1|167656

>Trimin1|167656|e_gw1.52.93.1 ID=Trimin1|167656|e_gw1.52.93.1|Name=jgi.p|Trimin1|167656|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=334bp
GHTVQFCRDQHGSRFIQQKLEVASEAEKAAFFEEVVPHAQSLMTDVFGNY
VIQKLFDHGGPDQRENLASFLVGHAVQLSLQMYGCRVVQKALEFASIDTL
IALVSEFSGQVMKCVQDQNGNHVIQKCIEVVCATAKAEGAYLHSHIQFII
DAFMGQVEKLSTHAYGCRVIQRILEHCIDAQRDPVLEEIRNSFSALIQDQ
YGNYVIQHVLKHGRPSDRVMLMNEVRVHLLPYSQHKFASNVVEKCLQYGT
REERGALIHHLTHGHAEGQASLLQVMVCDPYANYVVQKIIDVADAEQREG
IITEIRAHAAQLKRYTFGKHIISRLEKISGKKM*
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mRNA from alignment at Contig_52:553909..560084-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_9961 ID=mRNA_9961|Name=jgi.p|Trimin1|167656|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6176bp|location=Sequence derived from alignment at Contig_52:553909..560084- (Tribonema minus UTEX_B_3156 )
GGCCACACCGTCCAGTTCTGCCGCGACCAGCACGGCAGCCGCTTCATACA
GCAGAAGCTCGAGGTGGCGAGCGAGGCGGAGAAGGCCGCGTTCTTCGAGG
AGGTGAGCGCGGCGCAGCGCAGCGCAACGCTTGGCGTGCCCAGTGCGTGC
GTTGTCCTCGCAGTGATGCCATCTGGCGATGGCGTGAAGAAGTGACTGGC
AGTGCGCAATGAGACACTTTCAGGGCGTTCACAAGACACGTGTGGGTTCT
GCTTGCAAGCTGGGCATCCACCATCTTCTTTTTTTTTCCGCGCCCTAAGC
ACGAACTCTAACAAGACGTACATGGGGGGACACAGCGGGCGTCCCTGGCA
TGAGTGCTCGTACTCGCGTACATGCGCAACGCGCGCCGGTGGCGCTCCTG
CAGCTCCTGCCCCAGTTCTCACGACGGACCGTTCTGGCAGGGACTTCACC
AGTACATGCTGACACACCTGCCGACGCTACTGGTGACGCTCCCGCAGGTC
CTACGCCGCCTGCGCTCAGTCGCTCACGGCGGACGTTCTCGTTACGCCGC
GTTCTATACAGGCGCACATGCGTGCATGCAATTCTCAGGCATGGCTAGGT
ACATGCGATCGCACGGTTCTCACACATACCTACCCAAATGTAAATACGTG
GCGTCATCGGCGCCACTCCCGCAGGCCGTGCTGCGCGCGCAGTCGCTCAC
GGCGGACCTCCCTCGACATGTGCCCTTCTTTGTAGATACATGCATGCGTC
TACACACACGCATGCAATTCTCACACGTACCTACCTACGGATGTGGCGTC
ATTGGCGGCGCTCCTGCAGGTCGTGCCCCACGCCCACTCTCTCATTACGG
ACGCCCCTTGACATGCGTCGTTCTTGTACACGCGCACTTGCGCGCACACA
ATTCTCACACATACCTACCTACCTACATGCCGTCGCCGGTGACGCTCCCG
CAGGTCGTGCCGCATGCCCAGTCGCTCATGACGGACGTCTTTGACACGCG
TTCTTGTGGATACATATGTACACGCGCACTTGCGTGCACGCAAACTCTCA
GGCATACCCAAGTACATGTGCGTGCACAATTATCACACATACCTACCTGC
CTCCGTGCCGTCGCCGGTGACGCTCCCGCAGGTCGTGCCGCACGCGCAGT
CGCTCATGACGGACGTATTTGGCAACTACGTCATCCAGAAGCTGTTTGAC
CACGGCGGGCCTGACCAGCGTGAGAACCTCGCGTCGTTCCTCGTCGGCCA
CGCCGTCCAGCTCTCGCTGCAGATGTACGGCTGCAGGGTCGTGCAGAAGG
TGCGCCCATTTGGCCGCAGGCAACTTCAAGTCATGACATCAAGAGTTGGA
GTTGGGCTAGGGTCAGGGTTAGGGTTAGGGTTAGCGCCAGGGTCATTTAG
GCACGCCCGCCAGCCTTCGCTGCAGATGTACGGCTGCAGGGTCGTGCAAA
AGGTGCGTCACCCCCTGCGGTAATACACTTCAAATTATGGGGGCAAGGGT
CAGGGTGAGGGCAAGAGTTTGGCCACGCCACCTGGCTGCAGATACACGGC
TGCAGGGTGATGCATAAGGTGCGTGGCGCTGCGCGCGCGGCAGTGCGAGT
TCGGGTATCTGTGCGCATCAGGGCATGGCTCTGCGCCGTGTCAATTCGAT
ATTCCAAGCCCCGCACTATCAGTGTGCTGTCAACAAGCAATTCGTACCGC
TGTCGCGGCCGCGTGGCCGCGGGGAACTGGCGGAGCGGTTATGATTAGGG
TGAGGGTTGGGTCATGTGAAGGGTTTGGTCATATGAAAGTGCACTCCAGT
GGCTGCGGCTGTCGTCGTGGCTCCTGGCAGCGTTCAGCCCCAGCCTGTTG
TGACAGCAAGAAAAATCGGATGCGCTGTCATTTCTTTGTGGCAGCACTCA
GCGCCCGTTGGTGCTGACATTCGATTGTTGGGCCGTGCATAGCATGCAGT
ACGCGTGCGCGTGCCGTTCAAGTCGACCAGTGTCCGACGCCAAATCTCCT
AGGGGGTGTCATAAATTGAACCTGACCTTAGGGTAAGGGTTAGCCCCTGG
CCCTACGCCCGTGTAAGAAACCTCCAGGGGCACACTGAAAGAGGGCGCCC
GAAATTGCGCGCAATGCTTGGCGCGGAAGGGGTTTCAGGCACCGGTCCTT
ATCCCCACGAACACCAGTGAACTTGCCGTAATTGTGGACCCTGATGGCTG
TTCTTCAACCCCCATCGGCATCTCCTACAGCTGCTCTTGTGCGTGTCCAC
GCGCAGCATCATGATCAAGCAAGCCCTTCATCCATGCGGTGTACACCACT
TGTACGGGCACAGTCAGGGCTGCCCTATACCGTGATTGGCACCCCTTCTG
TCCGTCGTTCACCCCCGCCCGCCTTTCCCTGGCGTCCGTGTGTATCTGCG
CGCCGCAGGCCTAACCTAAGCTTGACGCTTAGCCCCCGCCCCAATGCTGT
GCAGGCCCAACGCTGTACACTCAGGTTTCCATGCTCGGGGTGACCTTTGC
GGTCATTTGTTGACCCCAGTGCCTGAGCCTCACCCCCCACCCGCATCTCC
CACGGCTGCTTCTGCGGCATTCTAAACGCCGCAGGCCCTAGAGTTTGCCA
GCATTGACACGCTCATCGCGCTGGTGAGCGAGTTCAGCGGCCAGGTGATG
AAGTGCGTGCAGGACCAGAACGGGAACCACGTCATACAGAAGTGCATCGA
GGTGAGAGCGCCGTTGTTGCGTACTGTAGTTCATCCGTGTGGTTGCCAGA
GCACTGATGCATGAACTCAGCGGCCACATAGCGTGAAGTGCGTGCAGGAC
CAAAAGGGGAACCACGTCATACAGAAGTGCATCGAGGTGAGAGCGCCGTA
TTTCTATTCTGCAGTTGATCCCGTGTGGTTGTCGGTGCGTGAATCTGGCG
GTCGGGCTGTGAAGTGGATAGATAGTCTACAGGTTCAGTGCGGGAATGCC
ATGCCATGCAGAAGTACACATGAACCATTGATTGACTCATTCACGCATTG
AATCACTCATCCGTTCATTCATTCGCTCGTTTTGTCTTCATGAACTGAGC
GTGCGTGCTATACCATTGCTGTCGGCACCAGGCCATCCGCTGTCACGAAT
GCGCCCCTGAAGGTTGGGGGGACATTCACTTCTGCGGGGGGGCATTCGTT
TCTTCGGGTTAGGGTTAGGGTTAGGGTTAGGGTTACAGGAGGGTGACATG
GTCGTAAGTCACATCGTGCGAGCGGTCTTGATAGCGCAGTGCATTCACGC
ACTGTTTGATAGATTTCCGCGTCCTGGCAAGCACTTCACGACCATAACTT
GAAGTGTGTGTCGTCACCGCGCCGTCGCGCGTTTCACCCGCTGTCGCGCA
GGTGGTGTGCGCCACCGCCAAGGCCGAGGGGGCGTATCTGCACAGGTGAG
GGCTCTTATCACGCGCCTCAGTCTGCATCTGTCACTCCGCTCGCTTCGTG
TGCACGCGCGTCGCCGCCGCTGCCGCCGCTCTTTGTCGCCACCGCCGCTA
CATCATCGGCCTGCAGTGCTCAATAAGCGCGTTTCTTTAGCGTGTCTGCA
GCGTGCATGTGCACGCACTTGCCGCCGCCGCCGCCGCACGCGCTCACCAC
GCGCAGCCACATTACAGTTCAGCAAGCGTGCATCTTTCACGTATCACCTG
GACTGCCAGCCTCGATCCCCGTGGCGCATGCGCACGCTCGTTTGCTCGCC
GGTGTGCGCCTTTGCAGCCACATACAGTTCATCATTGGCGCGTTCATGGC
CCAAGTGGAGAAGCTCAGAACGCGCGCGTACGGCTGCGTGCGCCTTTTGC
ATATCACCTAGACCGCCAGCCTCACTCCTGTGGCGCATACGCACGCTCGC
TCACTCGCCGCTGCCGCCGCTGTGCGCCTTTGCAGCCACATCCAGTTCAT
CATCGACGCATTCATGGGGCAAGTGGAGAAGCTCAGCACGCACGCGTACG
GGTGCCGCGTCATCCAGCGGATACTCGAGCACTGCATCGACGCGCAGCGC
GACCCCGTCCTCGAGGAGATCCGCAACTCCTTCAGCGGTGAGGCGTCTGG
CGCTTGAGAGATTCAACGGCCTGTGTCCGTCGCCTCAAACTACGAATGTT
GTACTTCGTATACTTCAAAGCACTTCAAATTATACAATGAGGTGCCTGGC
ACTGGAGCACTGCATCGACGCGCAGCGCGACCCCGTCCTCGAGGAGATCC
GCAACTTATTCAGCGGTGAGGAGCCCGTCCTTGTCTCTGAAGTTCGAACG
CTCGCCGAGCTTCACATTGCTCGCGTGCTGCAAAGTGCGTAGACGACATG
ATGGTCCGAAGAGTGTTTGGTACGTACAGTACAGTACGGTGCATGGCACG
CGCAGAGCGGCTTCGTCCCCGAGGAGATCCGCAACTCCTTGAGCGGTGAG
AGGCGCCTGACGCTTGACAGGATATAATGGCATGCACGCCTCAAACTCCC
CAAACTGCGAATGTTGTATGCTTCGAAGTATTCATGTTGTATATATATAT
ACTTCAAAGTACTTCACACACATTTTACGGATGAGGTGTCTGGCACCGGA
GCATCAACTGATCAAGCATTGCGACCCCGTCATCGAGGAGATCCGCAACT
CTGCGGTGAGACCTCTGACCCCATCACTGATGTCCCCCCCCCTCCCCCCC
TCCCCCCCCCCTTTTCCCCACCTTCTCCCCCTTCCCCCGCACGCTCCCCG
CTGCAGCGCTCATCCAGGACCAGTACGGCAACTACGTGATACAGCACGTA
CTCAAGCACGGCCGCCCATCTGACAGGTCAGCACCCCCAGCGCACTCACC
GTAGCGGTGTTTGCATGTCATCACGAGTCCCGTAAGTTCAACTTGAAGCG
GTGTTTGCAGGGCCTTTGCAGCAGCGAAGAGAGGGCTGTGTCAGCGCTCA
ACACGGCGCGCGGCGCTGAGGTGCGTGCCGCGCCGCAGGGCCCCCGAGCA
GCGGCGCGACCGCGCGTGCTGTGCAGGCGAAGTAATACGGGAGTACTTGT
TGCAGCACGGATTGTCGAATCGTGCGTCCGACGGCCCCGCGGCACATTAT
CGTCGGTGAAAAGGAGGCAGCCCTGCGTCGTTGTGTGGCGCAAGAGTTTC
TATTCCCTGCCGCTGCTCCCTGGCGCAGGGTACCTCTTATACTGAGCCGT
CGCCTCACTCTCGCTCGCTTGTTTCTTTCTCTCCCTCCGCCGCCGCTCGC
GCGCGCAGGGTGATGCTGATGAACGAGGTGCGCGTCCACCTGCTGCCGTA
CAGCCAGCACAAGTTTGCGAGCAACGTTGTGGAGAAGTGCCTGCAGTACG
GCACGCGCGAGGAGCGCGGCGCGCTGATACACCACCTCACGCACGGCCAC
GCCGAGGGCCAGGCGAGCCTGCTGCAGGTGCGTGCAAGTGTATACTTTGA
TACTGAACTTCACGCATGTGCTTCATTGGTACACCACCTCACGCACGGCC
ACGCCGAGGGCCAGGCGAGTCTGCTCCAGGTGCGTGCGTTGCGGTATGCT
GCGCAACTGCTTTTATTTGCAGTGAACTTCATGTCTGTATTCATACAACT
CAAACCTGTACTGATACACCACCTCACGCACGGCCACGCCGAGGGCCAGG
CGAGCCTGCTGCAGGTGCGTGTATGGCGCTATACGTATATACTTCTACTA
TGCATGTGCATGTACTTCAGTATCACATCTCAAAAAGTATCGGAGTATAG
AGCCGAAGGCCAGGCGAGCCTGCTGCGGGTGCATACGTGCCATTACATAT
GCATCCACACATACCCGCATGTATTTGGAAATATGTTGCTTGCTTAGACT
AGGTTATATGCCTCTTCTTATTCCCTACATACAAAGTACGACGCGTAGCG
TTGCTCCGTCTCTCTCCAGATCGCGCACCCATCCATGTCCACCTGACAGA
CACAGCTCTGTACACGCAATGCCGTCGAGTACGTACAACACCTTTACTCA
CCTCGCTGCGCGATTGCGTTTCGCATTCGCGCCGCCGCCGCCGCAGGTCA
TGGTGTGCGACCCGTACGCCAACTACGTCGTGCAGAAGATCATCGACGTC
GCGGACGCGGAGCAGCGCGAGGGCATCATCACGGAGATCCGCGCGCACGC
CGCGCAGCTCAAGCGCTACACGTTCGGCAAGCACATCATCTCGCGCCTCG
AGAAGATCTCGGGCAAGAAGATGTGA
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Coding sequence (CDS) from alignment at Contig_52:553909..560084-

>mRNA_9961 ID=mRNA_9961|Name=jgi.p|Trimin1|167656|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1002bp|location=Sequence derived from alignment at Contig_52:553909..560084- (Tribonema minus UTEX_B_3156 )
GGCCACACCGTCCAGTTCTGCCGCGACCAGCACGGCAGCCGCTTCATACA
GCAGAAGCTCGAGGTGGCGAGCGAGGCGGAGAAGGCCGCGTTCTTCGAGG
AGGTCGTGCCGCACGCGCAGTCGCTCATGACGGACGTATTTGGCAACTAC
GTCATCCAGAAGCTGTTTGACCACGGCGGGCCTGACCAGCGTGAGAACCT
CGCGTCGTTCCTCGTCGGCCACGCCGTCCAGCTCTCGCTGCAGATGTACG
GCTGCAGGGTCGTGCAGAAGGCCCTAGAGTTTGCCAGCATTGACACGCTC
ATCGCGCTGGTGAGCGAGTTCAGCGGCCAGGTGATGAAGTGCGTGCAGGA
CCAGAACGGGAACCACGTCATACAGAAGTGCATCGAGGTGGTGTGCGCCA
CCGCCAAGGCCGAGGGGGCGTATCTGCACAGCCACATCCAGTTCATCATC
GACGCATTCATGGGGCAAGTGGAGAAGCTCAGCACGCACGCGTACGGGTG
CCGCGTCATCCAGCGGATACTCGAGCACTGCATCGACGCGCAGCGCGACC
CCGTCCTCGAGGAGATCCGCAACTCCTTCAGCGCGCTCATCCAGGACCAG
TACGGCAACTACGTGATACAGCACGTACTCAAGCACGGCCGCCCATCTGA
CAGGGTGATGCTGATGAACGAGGTGCGCGTCCACCTGCTGCCGTACAGCC
AGCACAAGTTTGCGAGCAACGTTGTGGAGAAGTGCCTGCAGTACGGCACG
CGCGAGGAGCGCGGCGCGCTGATACACCACCTCACGCACGGCCACGCCGA
GGGCCAGGCGAGCCTGCTGCAGGTCATGGTGTGCGACCCGTACGCCAACT
ACGTCGTGCAGAAGATCATCGACGTCGCGGACGCGGAGCAGCGCGAGGGC
ATCATCACGGAGATCCGCGCGCACGCCGCGCAGCTCAAGCGCTACACGTT
CGGCAAGCACATCATCTCGCGCCTCGAGAAGATCTCGGGCAAGAAGATGT
GA
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