Trimin1|167646|e_gw1.52.36.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|167646
Unique NameTrimin1|167646|e_gw1.52.36.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length227
Homology
BLAST of jgi.p|Trimin1|167646 vs. uniprot
Match: A0A835YZJ3_9STRA (Methionyl-tRNA synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZJ3_9STRA)

HSP 1 Score: 476 bits (1224), Expect = 4.240e-170
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
Query:    1 IGHAYEAIASDCLSRYHRMYGRRVFFQTGTDEHGQKIAAAAEAEGKQPIDICDLYAGRFQELNQRLLISNDFYIRTTQPAHHAESQKLWLRCAEAGDIYLGKYEGWYNEREETFVSDKDAELTDFKDAYGWPLKRTSEASYFFRMGKYQEWLVQYINDHPEFIQPADKRAFILARLAEPLGDLSISRTTFRWGIPVPEGFDAAHVMYVWFDALSNYISSVHALDPG 226
            IGHAYEAIASDCLSRYHRMYGRRVFFQTGTDEHGQKIAAAAEAEGKQPIDICDLYAGRFQELNQRLLISNDFYIRTTQPAHHAESQKLWLRCAEAGDIYLGKYEGWYNEREETFVSDKDAELTDFKDAYGWPLKRTSEASYFFRMGKYQEWLVQYINDHPEFIQPADKRAFILARLAEPLGDLSISRTTFRWGIPVPEGFDAAHVMYVWFDALSNYISSVHALDPG
Sbjct:    1 IGHAYEAIASDCLSRYHRMYGRRVFFQTGTDEHGQKIAAAAEAEGKQPIDICDLYAGRFQELNQRLLISNDFYIRTTQPAHHAESQKLWLRCAEAGDIYLGKYEGWYNEREETFVSDKDAELTDFKDAYGWPLKRTSEASYFFRMGKYQEWLVQYINDHPEFIQPADKRAFILARLAEPLGDLSISRTTFRWGIPVPEGFDAAHVMYVWFDALSNYISSVHALDPG 226          
BLAST of jgi.p|Trimin1|167646 vs. uniprot
Match: D8LRH8_ECTSI (Methionine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRH8_ECTSI)

HSP 1 Score: 332 bits (851), Expect = 1.250e-105
Identity = 161/225 (71.56%), Postives = 181/225 (80.44%), Query Frame = 0
Query:    1 IGHAYEAIASDCLSRYHRMYGRRVFFQTGTDEHGQKIAAAAEAEGKQPIDICDLYAGRFQELNQRLLISNDFYIRTTQPAHHAESQKLWLRCAEAGDIYLGKYEGWYNEREETFVSDKDAELTDFKDAYGWPLKRTSEASYFFRMGKYQEWLVQYINDHPEFIQPADKRAFILARLAEP-LGDLSISRTTFRWGIPVPEGFDAAHVMYVWFDALSNYISSVHALD 224
            IGHAYEAIASD LSRY RM G+RV FQTG+DEHGQKIA  A   G QPIDICD YAG+FQELN+RLLISND Y+RTT   H   SQ+LW  CA+AGDI+LGKYEGWY+EREE +V+D DAEL DFKDA+G PLKR SEASYFF+MGKY EWL+QYI D+P FIQP   R  IL RL      DLS+SRTTF+ GIPVP GFD AHVMYVWFDAL+NY+S +HALD
Sbjct:  138 IGHAYEAIASDVLSRYQRMSGKRVIFQTGSDEHGQKIANTAAKLGLQPIDICDKYAGKFQELNKRLLISNDLYMRTTSALHKETSQRLWQICADAGDIFLGKYEGWYDEREEKYVTDSDAELADFKDAFGSPLKRMSEASYFFKMGKYIEWLIQYITDNPSFIQPETHRLNILTRLQNGHQNDLSVSRTTFKHGIPVPVGFDQAHVMYVWFDALTNYLSGIHALD 362          
BLAST of jgi.p|Trimin1|167646 vs. uniprot
Match: K8YQC4_NANGC (Methionine--tRNA ligase n=4 Tax=Monodopsidaceae TaxID=425072 RepID=K8YQC4_NANGC)

HSP 1 Score: 309 bits (791), Expect = 3.850e-97
Identity = 144/226 (63.72%), Postives = 177/226 (78.32%), Query Frame = 0
Query:    1 IGHAYEAIASDCLSRYHRMYGRRVFFQTGTDEHGQKIAAAAEAEGKQPIDICDLYAGRFQELNQRLLISNDFYIRTTQPAHHAESQKLWLRCAEAGDIYLGKYEGWYNEREETFVSDKDAELTDFKD-AYGWPLKRTSEASYFFRMGKYQEWLVQYINDHPEFIQPADKRAFILARLAEPLGDLSISRTTFRWGIPVPEGFDAAHVMYVWFDALSNYISSVHALDP 225
            IGHAYEA+ SD ++RY+RM G++VFF TGTDEHGQK+A  AE  G +PI++CD+YAG+FQ LN  L ISNDF++RTT P H+A +Q+LW RCA AGDIYL KYEGWYN REETFV++ +A+L D+KD A G PLK+  E SYFFRM KY++ L+Q+I   P FI P  +R  IL+RL E L DLSISRTTF WGIPVPE F  AHV+YVWFDALSNY++ +  LDP
Sbjct:  112 IGHAYEAVTSDVIARYYRMVGQQVFFLTGTDEHGQKVATTAEGMGMKPIELCDMYAGKFQALNHSLRISNDFFVRTTMPEHYASAQELWNRCAAAGDIYLSKYEGWYNVREETFVTENEAKLADYKDPASGLPLKKMEETSYFFRMSKYRDALIQHIQASPSFILPDTRRNSILSRLEEELTDLSISRTTFDWGIPVPENFAPAHVLYVWFDALSNYLTGIRWLDP 337          
BLAST of jgi.p|Trimin1|167646 vs. uniprot
Match: A0A7S2WSF8_9STRA (Methionine--tRNA ligase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSF8_9STRA)

HSP 1 Score: 303 bits (777), Expect = 3.370e-95
Identity = 147/227 (64.76%), Postives = 169/227 (74.45%), Query Frame = 0
Query:    1 IGHAYEAIASDCLSRYHRMYGRRVFFQTGTDEHGQKIAAAAEAEGKQPIDICDLYAGRFQELNQRLLISNDFYIRTTQPAHHAESQKLWLRCAEAGDIYLGKYEGWYNEREETFVSDKDAELTDFKD-AYGWPLKRTSEASYFFRMGKYQEWLVQYINDHPEFIQPADKRAFILARLAEPLGDLSISRTTFRWGIPVPEGFDAAHVMYVWFDALSNYISSVHALDPG 226
            +GHAYEA+ SD ++R+HR  GRRVFF TGTDEHGQKIA  A  +GKQPIDICD YA  FQ LN+RL +SND +IRTT+  H A +Q+LW RCA  GDIYL  Y GWYNEREETFV D DAEL  FKD   G PLKRT EASYFFR+ KY E L++    HPE  +P+++R  IL  L EPL DLSISRT+F WGIPVP  FD  HVMYVWFDALSNY+S +  LD G
Sbjct:   75 MGHAYEALTSDVIARWHRTIGRRVFFLTGTDEHGQKIANTAAGQGKQPIDICDKYAEGFQRLNRRLRVSNDRFIRTTEAQHEATAQELWRRCAANGDIYLDNYTGWYNEREETFVKDADAELWGFKDPGSGQPLKRTEEASYFFRLSKYHEPLLELFKAHPEVCEPSERRKDILDMLKEPLSDLSISRTSFSWGIPVPSEFDQRHVMYVWFDALSNYMSGIRGLDGG 301          
BLAST of jgi.p|Trimin1|167646 vs. uniprot
Match: A0A7S1TWI2_9STRA (Methionine--tRNA ligase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWI2_9STRA)

HSP 1 Score: 281 bits (719), Expect = 1.770e-87
Identity = 137/226 (60.62%), Postives = 169/226 (74.78%), Query Frame = 0
Query:    1 IGHAYEAIASDCLSRYHRMYGRRVFFQTGTDEHGQKIAAAAEAEGKQPIDICDLYAGRFQELNQRLLISNDFYIRTTQPAHHAESQKLWLRCA-----EAGDIYLGKYEGWYNEREETFVSDKDAELTDFKD-AYGWPLKRTSEASYFFRMGKYQEWLVQYINDHPEFIQPADKRAFILARLAEPLGDLSISRTTFRWGIPVPEGFDAAHVMYVWFDALSNYISSV 220
            +GHAYE +++D ++RYHRM GR VFF TG+DEHGQKIA  AE EG  PI ICD Y+  F+ LNQRLL+SND Y+RTT   H A  ++LW +CA     +  DIYL +YEGWYN REETFVS+ DA+LT++ D   G PL +TSE SYFFRM +YQE LV +I  +P+FIQP +KR  IL RL EPL DL +SRTTF WGI +PEG++  HVMYVWFDAL+NY+S V
Sbjct:  173 MGHAYEGLSTDIIARYHRMAGRDVFFLTGSDEHGQKIAKRAEDEGTTPIAICDRYSSAFKALNQRLLVSNDGYVRTTDEDHMAICRRLWQQCAATLGPDGSDIYLTQYEGWYNVREETFVSETDAQLTNYMDPTSGQPLTKTSEESYFFRMSRYQERLVAHIQANPDFIQPPEKRGDILKRLEEPLRDLCVSRTTFDWGITLPEGYETNHVMYVWFDALTNYLSGV 398          
BLAST of jgi.p|Trimin1|167646 vs. uniprot
Match: A0A7S2YTJ8_9STRA (Methionine--tRNA ligase (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YTJ8_9STRA)

HSP 1 Score: 281 bits (718), Expect = 1.910e-87
Identity = 141/227 (62.11%), Postives = 169/227 (74.45%), Query Frame = 0
Query:    1 IGHAYEAIASDCLSRYHRMYG--RRVFFQTGTDEHGQKIAAAAEAEGKQPIDICDLYAGRFQELNQRLLISNDFYIRTTQPAHHAESQKLWLRCAEAGDIYLGKYEGWYNEREETFVSDKDAELTDFKD-AYGWPLKRTSEASYFFRMGKYQEWLVQYINDHPEFIQPADKRAFILARL-AEPLGDLSISRTTFRWGIPVPEGFDAAHVMYVWFDALSNYISSVHAL 223
            +GHAYEA  SD ++RYHR+ G  + V+F TGTDEHGQKIA  A  +GKQPIDIC+LY+  F+ LNQRLLI+ND Y+RTT   H   +Q LW +CAEAGDIYL  Y GWYN REETFV++ DA+LTDFKD   G PLK+  E SYFF+M KYQ+ L+ +I  +P FIQP   R  IL RL ++ L DLSISRTTF WGIPVPEGF   HVMYVW DALSNY++ V+ L
Sbjct:  117 MGHAYEATTSDVIARYHRLCGAHKSVYFLTGTDEHGQKIAQTAADQGKQPIDICNLYSTGFRVLNQRLLITNDDYVRTTSDRHKKTAQALWKKCAEAGDIYLDTYSGWYNVREETFVTESDAKLTDFKDPTSGKPLKKVQEESYFFKMSKYQKDLIAHIEANPLFIQPEMHRNLILQRLRSDELRDLSISRTTFSWGIPVPEGFKDNHVMYVWMDALSNYLTGVNGL 343          
BLAST of jgi.p|Trimin1|167646 vs. uniprot
Match: A0A7S2AME4_9STRA (Methionine--tRNA ligase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AME4_9STRA)

HSP 1 Score: 283 bits (723), Expect = 4.250e-87
Identity = 141/232 (60.78%), Postives = 171/232 (73.71%), Query Frame = 0
Query:    1 IGHAYEAIASDCLSRYHRMYGRRVFFQTGTDEHGQKIAAAAEAEGKQPIDICDLYAGRFQELNQRLLISNDFYIRTTQPAHHAESQKLWLRCAEAGDIYLGKYEGWYNEREETFVSDKDAELTDFKD-AYGWPLKRTSEASYFFRMGKYQEWLVQYINDHPEFIQPADKRAFILARLAEP------LGDLSISRTTFRWGIPVPEGFDAAHVMYVWFDALSNYISSVHALDP 225
            IGHAYE + +D ++R+HR++GRRVFF TGTDEHGQKIA  AE +G QPIDIC+ YA  FQ++N++L +SNDF++RTT   H A +Q LW +C EAGDIYL  Y GWY EREETFV+ KDAE   +KD + G PLK  SEASYFFR+ KY++ L+  +ND PEF QP  +R  I A L EP      L DLSISRTTF+WGIPVP   D  HVMYVWFDALSNY+S V  +DP
Sbjct:  106 IGHAYENLVTDIIARWHRVWGRRVFFLTGTDEHGQKIANTAEKDGLQPIDICNKYAAEFQKMNKKLAVSNDFFVRTTSAKHKALAQALWKKCEEAGDIYLDNYTGWYLEREETFVTPKDAEEWGYKDPSSGVPLKEVSEASYFFRLSKYRQPLLDLLNDRPEFCQPESRRLLIKAML-EPTEGDNVLRDLSISRTTFKWGIPVPG--DVNHVMYVWFDALSNYLSGVDGMDP 334          
BLAST of jgi.p|Trimin1|167646 vs. uniprot
Match: A0A7S0VMT7_9CRYP (Methionine--tRNA ligase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VMT7_9CRYP)

HSP 1 Score: 283 bits (723), Expect = 4.840e-87
Identity = 140/224 (62.50%), Postives = 172/224 (76.79%), Query Frame = 0
Query:    1 IGHAYEAIASDCLSRYHRMYGRRVFFQTGTDEHGQKIAAAAEAEGKQPIDICDLYAGRFQELNQRLLISNDFYIRTTQPAHHAESQKLWLRCAEAGDIYLGKYEGWYNEREETFVSDKDAELTDFKD-AYGWPLKRTSEASYFFRMGKYQEWLVQYINDHPEFIQPADKRAFILARLAEPLGDLSISRTTFRWGIPVPEG----FDAAHVMYVWFDALSNYISS 219
            +GHAYEA+ SD ++R+HR YGR VFF TGTDEHGQKIA  AEA G +PIDICD YA  FQ LN+R+ ISNDFYIRTT   H   +Q+L+ R A+AGDIYL  YEGWYN REETFV++ DA+ +D+KD   G PL++ +E SYFFRM KYQE LV++I D+ +FIQP  +R  +L+RL EPL DLS+SRTTF WG+PVPE      D  HVMYVWFDAL+NY+S+
Sbjct:  142 MGHAYEAVTSDIIARWHRAYGRDVFFCTGTDEHGQKIAQTAEAMGLKPIDICDKYAEAFQVLNRRMDISNDFYIRTTMDKHKKAAQELFRRAADAGDIYLDTYEGWYNVREETFVTENDAQQSDYKDPTSGVPLQKMTEESYFFRMSKYQERLVRHIEDNEDFIQPDYRRNEMLSRLKEPLRDLSVSRTTFDWGVPVPEHPALKSDKKHVMYVWFDALTNYLSA 365          
BLAST of jgi.p|Trimin1|167646 vs. uniprot
Match: A0A6B2KY41_9EUKA (Methionine--tRNA ligase n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KY41_9EUKA)

HSP 1 Score: 280 bits (716), Expect = 2.660e-86
Identity = 136/221 (61.54%), Postives = 167/221 (75.57%), Query Frame = 0
Query:    1 IGHAYEAIASDCLSRYHRMYGRRVFFQTGTDEHGQKIAAAAEAEGKQPIDICDLYAGRFQELNQRLLISNDFYIRTTQPAHHAESQKLWLRCAEAGDIYLGKYEGWYNEREETFVSDKDAELTDFKD-AYGWPLKRTSEASYFFRMGKYQEWLVQYINDHPEFIQPADKRAFILARLAEPLGDLSISRTTFRWGIPVPEGFDAAHVMYVWFDALSNYISSV 220
            IGHAYEA+ +D ++RYHR+YGR VFF TGTDEHGQK+A AA+A+G +PI++CD Y G F+ELN RL +S D+YIRTT P H      LW R   AGDIYLGKYEGWYN REE FV+D +AE +++KD   G PL +TSE SYFFRM KYQE L+Q+I D+P FI P ++ A +L RL EPL DLSISRTTF WG+  P   +  HVMYVWFDAL+NY++ V
Sbjct:   15 IGHAYEAMVADTIARYHRIYGRNVFFMTGTDEHGQKVAEAAQAQGLKPIELCDKYVGMFRELNGRLNVSEDYYIRTTVPKHERTCIWLWKRAEMAGDIYLGKYEGWYNVREEKFVTDTEAEKSNYKDPGSGKPLVKTSEPSYFFRMSKYQERLIQHILDNPGFIFPEEREAEVLTRLREPLLDLSISRTTFDWGVKCPTR-EPDHVMYVWFDALTNYLTGV 234          
BLAST of jgi.p|Trimin1|167646 vs. uniprot
Match: L1JLS7_GUITC (Methionine--tRNA ligase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JLS7_GUITC)

HSP 1 Score: 279 bits (714), Expect = 3.340e-86
Identity = 138/223 (61.88%), Postives = 170/223 (76.23%), Query Frame = 0
Query:    1 IGHAYEAIASDCLSRYHRMYGRRVFFQTGTDEHGQKIAAAAEAEGKQPIDICDLYAGRFQELNQRLLISNDFYIRTTQPAHHAESQKLWLRCAEAGDIYLGKYEGWYNEREETFVSDKDAELTDFKD-AYGWPLKRTSEASYFFRMGKYQEWLVQYINDHPEFIQPADKRAFILARLAEPLGDLSISRTTFRWGIPVPEG----FDAAHVMYVWFDALSNYIS 218
            +GHAYEA+ SD ++R+HR YGR+VF+ TGTDEHGQKIA  AE  G +PIDICD YA  FQELN+RL ISNDFYIRTT   H   +Q L+L+ A+AGDIYL  YEGWYN REETFV++ +A+ +D+KD + G PL++ +E SYFFRM KYQ+ L+ YI  + +FIQP  +R  ILA+L EPL DLS+SRT F WGIPVPE      D  HVMYVWFDALSNY++
Sbjct:  106 MGHAYEAVTSDIIARWHRAYGRKVFYLTGTDEHGQKIADTAENLGVKPIDICDKYANAFQELNKRLGISNDFYIRTTMDKHKKLAQLLFLKAADAGDIYLDTYEGWYNVREETFVTETEAQASDYKDPSSGKPLEKRTEESYFFRMSKYQDRLLAYIEKNADFIQPVFRRNEILAKLREPLRDLSVSRTNFDWGIPVPEHPALKSDKKHVMYVWFDALSNYVT 328          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167646 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YZJ3_9STRA4.240e-170100.00Methionyl-tRNA synthetase n=1 Tax=Tribonema minus ... [more]
D8LRH8_ECTSI1.250e-10571.56Methionine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2... [more]
K8YQC4_NANGC3.850e-9763.72Methionine--tRNA ligase n=4 Tax=Monodopsidaceae Ta... [more]
A0A7S2WSF8_9STRA3.370e-9564.76Methionine--tRNA ligase n=2 Tax=Rhizochromulina ma... [more]
A0A7S1TWI2_9STRA1.770e-8760.62Methionine--tRNA ligase n=2 Tax=Phaeomonas parva T... [more]
A0A7S2YTJ8_9STRA1.910e-8762.11Methionine--tRNA ligase (Fragment) n=1 Tax=Amphipr... [more]
A0A7S2AME4_9STRA4.250e-8760.78Methionine--tRNA ligase n=1 Tax=Dictyocha speculum... [more]
A0A7S0VMT7_9CRYP4.840e-8762.50Methionine--tRNA ligase n=1 Tax=Hemiselmis tepida ... [more]
A0A6B2KY41_9EUKA2.660e-8661.54Methionine--tRNA ligase n=1 Tax=Arcella intermedia... [more]
L1JLS7_GUITC3.340e-8661.88Methionine--tRNA ligase n=1 Tax=Guillardia theta (... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033911Methioninyl-tRNA synthetase core domainPRINTSPR01041TRNASYNTHMETcoord: 206..217
score: 66.98
coord: 68..79
score: 49.07
coord: 20..34
score: 53.09
IPR015413Methionyl/Leucyl tRNA synthetasePFAMPF09334tRNA-synt_1gcoord: 137..222
e-value: 7.5E-18
score: 64.4
coord: 1..119
e-value: 2.6E-31
score: 108.8
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620HUPscoord: 1..225
e-value: 3.1E-69
score: 235.7
NoneNo IPR availablePANTHERPTHR43326:SF2AMINOACYL-TRNA SYNTHETASE, CLASS 1A,ANTICODON-BINDINGcoord: 1..220
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 1..222
IPR023457Methionine-tRNA synthetase, type 2PANTHERPTHR43326METHIONYL-TRNA SYNTHETASEcoord: 1..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_52contigContig_52:881079..886308 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167646mRNA_9990Tribonema minus UTEX_B_3156 mRNAContig_52 881079..886308 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|167646|e_gw1.52.36.1 ID=Trimin1|167646|e_gw1.52.36.1|Name=jgi.p|Trimin1|167646|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=227bp
IGHAYEAIASDCLSRYHRMYGRRVFFQTGTDEHGQKIAAAAEAEGKQPID
ICDLYAGRFQELNQRLLISNDFYIRTTQPAHHAESQKLWLRCAEAGDIYL
GKYEGWYNEREETFVSDKDAELTDFKDAYGWPLKRTSEASYFFRMGKYQE
WLVQYINDHPEFIQPADKRAFILARLAEPLGDLSISRTTFRWGIPVPEGF
DAAHVMYVWFDALSNYISSVHALDPG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033911MetRS_core
IPR015413Methionyl/Leucyl_tRNA_Synth
IPR014729Rossmann-like_a/b/a_fold
IPR023457Met-tRNA_synth_2