Trimin1|349925|estExt_Genemark1.C_Ctg_510086 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349925
Unique NameTrimin1|349925|estExt_Genemark1.C_Ctg_510086
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length480
Homology
BLAST of jgi.p|Trimin1|349925 vs. uniprot
Match: A0A835YZQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZQ9_9STRA)

HSP 1 Score: 798 bits (2060), Expect = 5.300e-289
Identity = 479/479 (100.00%), Postives = 479/479 (100.00%), Query Frame = 0
Query:    1 MSTIMALAGPEDRMTVAVVGPKSGISQAVADRLMAEGGARNIVYLGDEILGLGSSGASVVILAGDAGEGSAPADDLVLRALPSLPSSLQYLLYVSPSEVEAAPAEDTSAGAKPSGGVAGLVSLFKGGPESPLTAVRQLTTGQSAAKVIVMHTGRLFGPAAGPDPVPFLTGPKAEPKLNECWARRAALVGVGTLLAQTRGAATKRATAAAAVAQYLRSGGVAPAARGAEFSVVSADGPPPSEEEWAEELARVGGDAAAGAAVLAIEFDAMPRRDALVQWLTESWGPATLRRVESNMIRSGARPVRAAALRAAPASAYAPGGGAEVIWEAPTRNLEVEVTGRLQPKAAAAQQQALIASRRSTQVLLRDEPGSAGMRVVRCDGAGAPQIVPLVGEDEIVQSLLEGINAVAYARGYVTRKTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQGVEGPAKPAAKGRGRRARR 479
            MSTIMALAGPEDRMTVAVVGPKSGISQAVADRLMAEGGARNIVYLGDEILGLGSSGASVVILAGDAGEGSAPADDLVLRALPSLPSSLQYLLYVSPSEVEAAPAEDTSAGAKPSGGVAGLVSLFKGGPESPLTAVRQLTTGQSAAKVIVMHTGRLFGPAAGPDPVPFLTGPKAEPKLNECWARRAALVGVGTLLAQTRGAATKRATAAAAVAQYLRSGGVAPAARGAEFSVVSADGPPPSEEEWAEELARVGGDAAAGAAVLAIEFDAMPRRDALVQWLTESWGPATLRRVESNMIRSGARPVRAAALRAAPASAYAPGGGAEVIWEAPTRNLEVEVTGRLQPKAAAAQQQALIASRRSTQVLLRDEPGSAGMRVVRCDGAGAPQIVPLVGEDEIVQSLLEGINAVAYARGYVTRKTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQGVEGPAKPAAKGRGRRARR
Sbjct:    1 MSTIMALAGPEDRMTVAVVGPKSGISQAVADRLMAEGGARNIVYLGDEILGLGSSGASVVILAGDAGEGSAPADDLVLRALPSLPSSLQYLLYVSPSEVEAAPAEDTSAGAKPSGGVAGLVSLFKGGPESPLTAVRQLTTGQSAAKVIVMHTGRLFGPAAGPDPVPFLTGPKAEPKLNECWARRAALVGVGTLLAQTRGAATKRATAAAAVAQYLRSGGVAPAARGAEFSVVSADGPPPSEEEWAEELARVGGDAAAGAAVLAIEFDAMPRRDALVQWLTESWGPATLRRVESNMIRSGARPVRAAALRAAPASAYAPGGGAEVIWEAPTRNLEVEVTGRLQPKAAAAQQQALIASRRSTQVLLRDEPGSAGMRVVRCDGAGAPQIVPLVGEDEIVQSLLEGINAVAYARGYVTRKTSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQGVEGPAKPAAKGRGRRARR 479          
BLAST of jgi.p|Trimin1|349925 vs. uniprot
Match: A0A6H5JFR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR6_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 4.520e-73
Identity = 181/418 (43.30%), Postives = 237/418 (56.70%), Query Frame = 0
Query:    2 STIMALAGPEDRMTVAVVGPKSGISQAVADRLMAEGGARNIVYLGDEILGLGSS--GASVVILAGDAGEGSAPADD-LVLRALPSLPSSLQYLLYVSPSEVEAAPAEDTSAGAKPSGGVAGLVSLFKGGPESPLTAVRQLTTGQSAAKVIVMHTGRLFGPAAGPDPVPFLTGPKAEPKLNECWARRAALVGVGTLLAQTRGAATKRATAAAAVAQYLRSGGVAPAARGAEFSVVSADGPPPSEEEWAEELARVGGDAAAGAAVLAIEFDAMPRRDALVQWLTESWGPATLRRVESNMIRSGARPVRAAALRAAPASAYAPGGGAEVIWEAPTRNLEVEVTGRLQPKAAAAQQQALIASRRSTQVLLRDEPGSAGMRVVRCDGAGAPQIVPLVGEDEIVQSLLEGINAVAYARGYVTRK 416
            +T MA+AGP D   V V GP  GI+  +A RL A GG R +V L DE   L     GA VVI + D G  +  A   L    + +LP+S +YL++V   E  AA     +  AK   GV G  SL  GG +  L AVR +  G    + +V+H GRLFG A G +PVPFLTGPKAEP L+E   R+A LVG GT+L+    AATKRA+ A A+ + +     +   RG E SVVS DG   ++EEW EEL R+  D + G AV +IEFDA+ R+D L++WLT+SW PA LR+  + M+RSGARPV  A              G E++WE  T +L+    G+L                    +++ +EP  AG+R+VR  G G PQ   L GE+EIVQSLLEGIN VAY + +V RK
Sbjct:   62 ATKMAIAGPGDDAKVVVCGPPGGIAGLIAGRLTAAGGIREVV-LADETETLEQQLLGAKVVIGSSDGGPDAEEAPPGLADEVVSALPASTEYLIWVDSPEARAA-----AKAAKLEIGVLG--SLLGGGFKESLEAVRSVEGG---VRPVVVHAGRLFGAAGGDEPVPFLTGPKAEPVLDESITRQAVLVGPGTVLSSPEDAATKRASVAEAIERLING---SERKRGLELSVVSVDGFATTDEEWEEELKRL--DDSDGVAVFSIEFDAISRKDQLMRWLTDSWAPAALRKSTAGMLRSGARPVAVAPTET----------GLELVWETLTDDLKAVQAGKLS-------------------LVVNEEP--AGIRIVRVAGPGQPQGKTLSGEEEIVQSLLEGINTVAYPKSFVKRK 432          
BLAST of jgi.p|Trimin1|349925 vs. uniprot
Match: D7FWZ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWZ9_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 2.120e-35
Identity = 96/225 (42.67%), Postives = 129/225 (57.33%), Query Frame = 0
Query:  192 TLLAQTRGAATKRATAAAAVAQYLRSGGVAPAARGAEFSVVSADGPPPSEEEWAEELARVGGDAAAGAAVLAIEFDAMPRRDALVQWLTESWGPATLRRVESNMIRSGARPVRAAALRAAPASAYAPGGGAEVIWEAPTRNLEVEVTGRLQPKAAAAQQQALIASRRSTQVLLRDEPGSAGMRVVRCDGAGAPQIVPLVGEDEIVQSLLEGINAVAYARGYVTRK 416
            TL  Q   AATKRA+ A A+ + +     +   RG E SVVS DG   ++EEW EEL R+  D + G AV +IEFDA+ R+D L++WL +SWGPA LR+  + M+RSGARPV  A   +          G E++WE  T +L+    G+L                    +++ +EP  AG+R+VR  G G PQ   L GE+EIVQSLLEGIN VAY + +V RK
Sbjct:   46 TLEQQPEDAATKRASVAEAIERLING---SERKRGLELSVVSVDGFATTDEEWEEELKRL--DDSDGVAVFSIEFDAISRKDQLMRWLADSWGPAALRKSTAGMLRSGARPVAVAPTES----------GLELVWETLTDDLKAVQAGKLS-------------------LVVTEEP--AGIRIVRVAGPGQPQGKALSGEEEIVQSLLEGINTVAYPKSFVKRK 234          
BLAST of jgi.p|Trimin1|349925 vs. uniprot
Match: A0A7S3XU61_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU61_HETAK)

HSP 1 Score: 132 bits (333), Expect = 1.920e-30
Identity = 147/436 (33.72%), Postives = 190/436 (43.58%), Query Frame = 0
Query:   14 MTVAVVGPKSGISQAVADRLMAEGGARNIVYL---------------------GD----EILGLGSSGASVVILAGDAGEGSAPA------DDLVLRALPSLPSSLQYLLYVSPSEVEAAPAEDTSAGAKPSGGVAGLVSLFKGGPESPLTAVRQLTTGQSAAKVIVMHTGRLFGPAAGPDPVPFLTGPKAEPKLNECWARRAALVGVGTLLAQTRGAATKRATAAAAVAQYLRSGGVAPAARGAEFSVVSA-DGPPPSEEEWAEELARVGGDAAAGAAVLAIEFDAMPRRDALVQWLTESWGPATLRRVES-NMIRSGARPVRAAALRAAPASAYAPGGGAEVIWEA-PTRNLEVEVTGRLQPKAAAAQQQALIASRRSTQVLLRDEPGSAGMRVVRCDGAGAPQIVPLVGEDEIVQSLLEGINAVAYARGYVTR 415
            M  AVVGP  G ++A+A +L   G    I Y                      GD    E L    +GA VVI  GD G            D L+ R + + P+S + +  +  S+ +           K SGG+ G  S     PE  L A      G           G LFG A  P P  FLTGPKA P+L+E   +R  L+     LA +  A T R   A AV +     G APAA  A F VVS  D   PSE +WA+E AR+  DA+ G  V + EF ++ R  A  +WL   WGP  L  +   + IR+GARP     L            GA V WE    R +EV   GRL+                     ++ EP  AG+ V R DG G P    L GE+EI+QSL+EG+N VA+ RGYV +
Sbjct:   24 MKYAVVGPAGGFNEAMAKKLSDSGIPTTIFYQELQGTSPNPKLELNDCCTIIQGDTANGEALSKALAGAKVVITCGDCGLAKEDTPMTYEPDALLTRVIEAAPTSSKVIAVLPASKNK-----------KDSGGLFGSKS-----PEEALAARGGTAVGH----------GALFGAAVAPPP--FLTGPKAVPQLDEAVRKRGVLLSTSPALALS--ARTGRGALAEAVGRLAA--GAAPAAAAAAFYVVSVEDRAAPSEAQWAKEFARL--DASKGLQVYSAEFGSVDRA-AFPRWLRAKWGPKMLANLPVLDKIRTGARPTSVQPLGEL---------GAAVQWETLDARTMEVVYPGRLE---------------------IQVEP--AGLTVTRTDGKGGPLSSILPGEEEIIQSLIEGLNTVAFPRGYVMK 392          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349925 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YZQ9_9STRA5.300e-289100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JFR6_9PHAE4.520e-7343.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWZ9_ECTSI2.120e-3542.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XU61_HETAK1.920e-3033.72Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_51contigContig_51:834548..836765 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349925mRNA_8848Tribonema minus UTEX_B_3156 mRNAContig_51 834438..836765 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349925|estExt_Genemark1.C_Ctg_510086 ID=Trimin1|349925|estExt_Genemark1.C_Ctg_510086|Name=jgi.p|Trimin1|349925|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=480bp
MSTIMALAGPEDRMTVAVVGPKSGISQAVADRLMAEGGARNIVYLGDEIL
GLGSSGASVVILAGDAGEGSAPADDLVLRALPSLPSSLQYLLYVSPSEVE
AAPAEDTSAGAKPSGGVAGLVSLFKGGPESPLTAVRQLTTGQSAAKVIVM
HTGRLFGPAAGPDPVPFLTGPKAEPKLNECWARRAALVGVGTLLAQTRGA
ATKRATAAAAVAQYLRSGGVAPAARGAEFSVVSADGPPPSEEEWAEELAR
VGGDAAAGAAVLAIEFDAMPRRDALVQWLTESWGPATLRRVESNMIRSGA
RPVRAAALRAAPASAYAPGGGAEVIWEAPTRNLEVEVTGRLQPKAAAAQQ
QALIASRRSTQVLLRDEPGSAGMRVVRCDGAGAPQIVPLVGEDEIVQSLL
EGINAVAYARGYVTRKTSAAAATAAAAKATAAATAAAAAVVPARAAEEEA
TAAAAVAAAQGVEGPAKPAAKGRGRRARR*
back to top