Trimin1|349854|estExt_Genemark1.C_Ctg_500059 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|349854
Unique NameTrimin1|349854|estExt_Genemark1.C_Ctg_500059
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length1795
Homology
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BLAST of jgi.p|Trimin1|349854 vs. uniprot
Match: A0A836CBP7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBP7_9STRA)

HSP 1 Score: 1750 bits (4533), Expect = 0.000e+0
Identity = 1794/1794 (100.00%), Postives = 1794/1794 (100.00%), Query Frame = 0 
Query:    1 MRKLCEGAHISTLSFVSGSTVSVESFQALQVALTHGAHRAAAVRAQLESLLRDAAPEGGGDGAPLLVPLAALQTALEARQIHLQQPWLLGGVQAGSTPGAANGAAVDCEKFLVAAAAAERVQAMAVHLGWTAAAYINKPIRHCQHAASVSHEPLPLPPQVLPLGSSSSTAPLSAAPAAVAAPLPQLTAXXXXXXXXXLLLQRHFDAQLSRETPRVLRVGSGGDXXXXXXXXXXXXXXXXSTIAELRAELEVAQAGLASLEGRIRGGMAWVQQHVGLRMPSRVSAVSRLWGAEKIRDLCARAEERRLAAALSRWRAHRAHAANEALALGFLRFSXXXXXXXXXXXXXXXXXXXXXXXXXXGCARARRREQDAAARLIQRMARGLTARLRVXXXXXXXXXXXXXXXXXRVQGRSRAARAAAARRGQRAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGATAVQRVARGRLARRRVQXXXALRRAEDAVAALQAAYRRRRRAQRGSAASVLQRAIRMWEARLEGVRQRREAAAARLQALQRGRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRIQSVARGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTARAAAKRAQQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEQHVTALAEAAATRLQAAQRARAARARADALRRRRDAHTAQLEGAAEWGADAMREPGGGXXXXGRGESGEVAPAGNSAAAGKGDERVGRSGSRHGARSQQGRGGGRHSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGARPGSKXXXXXXXXXAXXXSSGSARNARGRDDASGRXXXXGGGDDGLGRVGSAASDATRDASDAQLLADENHADDVTAGAGAASEAAKAGAEANTAADGMEPAVGPQAEAGDDDEAAALIRAATSIQRSFRGYAGRDRAKAAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAAVAVRLVQEDAQRRAELEAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRGGGAEHGGAELAAIKASLVEEASARRRDALAAAEQREREAEELRQLKALLLEERARATVAAEKXXXXXXXXXXXXXXXXXXXXXDGSSAGGNAPLSDAAHDAAEVTGRNAEGGLAVLGGGGAASGQRAGGRGATAAQLAEVRKALAALRAQEMAQQQRAEAEAAAAARELAALXXXXXXXXXXXXXXXXXXXXXXXXXXTDLERQLQSQRAELQRGMEALAALKAAADAEAARRAKDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELAARGARLLAGETVELSDDEGSDXXXXXXXXXXXXXVARXXXXXXXXXXXXXERRSSGSGAPANSMDPTAXXXXXXXXXXXXXXXXXXXQRADRPRPSFIRHEVEATVAAVTEARLAELRAAVTEMREKQRLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRPATPSRPASAMRTQPPALASPNSIISDDRMAGAVMLTNGPASXXXXXEWLEYWDESVGATYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTLGPAGLQWVQLWDDSAKAHYYYCAATGEATWEEPKELSAAAARAAAAPAFENPADXXXXXXXXXXXXXXXXXXXXETIRPLRVAAAAAEGVA 1794
            MRKLCEGAHISTLSFVSGSTVSVESFQALQVALTHGAHRAAAVRAQLESLLRDAAPEGGGDGAPLLVPLAALQTALEARQIHLQQPWLLGGVQAGSTPGAANGAAVDCEKFLVAAAAAERVQAMAVHLGWTAAAYINKPIRHCQHAASVSHEPLPLPPQVLPLGSSSSTAPLSAAPAAVAAPLPQLTAXXXXXXXXXLLLQRHFDAQLSRETPRVLRVGSGGDXXXXXXXXXXXXXXXXSTIAELRAELEVAQAGLASLEGRIRGGMAWVQQHVGLRMPSRVSAVSRLWGAEKIRDLCARAEERRLAAALSRWRAHRAHAANEALALGFLRFSXXXXXXXXXXXXXXXXXXXXXXXXXXGCARARRREQDAAARLIQRMARGLTARLRVXXXXXXXXXXXXXXXXXRVQGRSRAARAAAARRGQRAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGATAVQRVARGRLARRRVQXXXALRRAEDAVAALQAAYRRRRRAQRGSAASVLQRAIRMWEARLEGVRQRREAAAARLQALQRGRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRIQSVARGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTARAAAKRAQQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEQHVTALAEAAATRLQAAQRARAARARADALRRRRDAHTAQLEGAAEWGADAMREPGGGXXXXGRGESGEVAPAGNSAAAGKGDERVGRSGSRHGARSQQGRGGGRHSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGARPGSKXXXXXXXXXAXXXSSGSARNARGRDDASGRXXXXGGGDDGLGRVGSAASDATRDASDAQLLADENHADDVTAGAGAASEAAKAGAEANTAADGMEPAVGPQAEAGDDDEAAALIRAATSIQRSFRGYAGRDRAKAAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAAVAVRLVQEDAQRRAELEAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRGGGAEHGGAELAAIKASLVEEASARRRDALAAAEQREREAEELRQLKALLLEERARATVAAEKXXXXXXXXXXXXXXXXXXXXXDGSSAGGNAPLSDAAHDAAEVTGRNAEGGLAVLGGGGAASGQRAGGRGATAAQLAEVRKALAALRAQEMAQQQRAEAEAAAAARELAALXXXXXXXXXXXXXXXXXXXXXXXXXXTDLERQLQSQRAELQRGMEALAALKAAADAEAARRAKDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELAARGARLLAGETVELSDDEGSDXXXXXXXXXXXXXVARXXXXXXXXXXXXXERRSSGSGAPANSMDPTAXXXXXXXXXXXXXXXXXXXQRADRPRPSFIRHEVEATVAAVTEARLAELRAAVTEMREKQRLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRPATPSRPASAMRTQPPALASPNSIISDDRMAGAVMLTNGPASXXXXXEWLEYWDESVGATYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTLGPAGLQWVQLWDDSAKAHYYYCAATGEATWEEPKELSAAAARAAAAPAFENPADXXXXXXXXXXXXXXXXXXXXETIRPLRVAAAAAEGVA
Sbjct:    1 MRKLCEGAHISTLSFVSGSTVSVESFQALQVALTHGAHRAAAVRAQLESLLRDAAPEGGGDGAPLLVPLAALQTALEARQIHLQQPWLLGGVQAGSTPGAANGAAVDCEKFLVAAAAAERVQAMAVHLGWTAAAYINKPIRHCQHAASVSHEPLPLPPQVLPLGSSSSTAPLSAAPAAVAAPLPQLTAXXXXXXXXXLLLQRHFDAQLSRETPRVLRVGSGGDXXXXXXXXXXXXXXXXSTIAELRAELEVAQAGLASLEGRIRGGMAWVQQHVGLRMPSRVSAVSRLWGAEKIRDLCARAEERRLAAALSRWRAHRAHAANEALALGFLRFSXXXXXXXXXXXXXXXXXXXXXXXXXXGCARARRREQDAAARLIQRMARGLTARLRVXXXXXXXXXXXXXXXXXRVQGRSRAARAAAARRGQRAAAXXXXXXXXXXXXXXXXXXXXXXXXXXGATAVQRVARGRLARRRVQXXXALRRAEDAVAALQAAYRRRRRAQRGSAASVLQRAIRMWEARLEGVRQRREAAAARLQALQRGRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRIQSVARGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTARAAAKRAQQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEQHVTALAEAAATRLQAAQRARAARARADALRRRRDAHTAQLEGAAEWGADAMREPGGGXXXXGRGESGEVAPAGNSAAAGKGDERVGRSGSRHGARSQQGRGGGRHSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGARPGSKXXXXXXXXXAXXXSSGSARNARGRDDASGRXXXXGGGDDGLGRVGSAASDATRDASDAQLLADENHADDVTAGAGAASEAAKAGAEANTAADGMEPAVGPQAEAGDDDEAAALIRAATSIQRSFRGYAGRDRAKAAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAAVAVRLVQEDAQRRAELEAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRGGGAEHGGAELAAIKASLVEEASARRRDALAAAEQREREAEELRQLKALLLEERARATVAAEKXXXXXXXXXXXXXXXXXXXXXDGSSAGGNAPLSDAAHDAAEVTGRNAEGGLAVLGGGGAASGQRAGGRGATAAQLAEVRKALAALRAQEMAQQQRAEAEAAAAARELAALXXXXXXXXXXXXXXXXXXXXXXXXXXTDLERQLQSQRAELQRGMEALAALKAAADAEAARRAKDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELAARGARLLAGETVELSDDEGSDXXXXXXXXXXXXXVARXXXXXXXXXXXXXERRSSGSGAPANSMDPTAXXXXXXXXXXXXXXXXXXXQRADRPRPSFIRHEVEATVAAVTEARLAELRAAVTEMREKQRLLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRPATPSRPASAMRTQPPALASPNSIISDDRMAGAVMLTNGPASXXXXXEWLEYWDESVGATYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTLGPAGLQWVQLWDDSAKAHYYYCAATGEATWEEPKELSAAAARAAAAPAFENPADXXXXXXXXXXXXXXXXXXXXETIRPLRVAAAAAEGVA 1794
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|349854 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CBP7_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1542..1582
NoneNo IPR availableCOILSCoilCoilcoord: 1171..1208
NoneNo IPR availableCOILSCoilCoilcoord: 511..538
NoneNo IPR availableCOILSCoilCoilcoord: 1392..1419
NoneNo IPR availableCOILSCoilCoilcoord: 1290..1378
NoneNo IPR availableCOILSCoilCoilcoord: 619..657
NoneNo IPR availableCOILSCoilCoilcoord: 540..560
NoneNo IPR availableCOILSCoilCoilcoord: 1106..1147
NoneNo IPR availableCOILSCoilCoilcoord: 242..262
NoneNo IPR availableCOILSCoilCoilcoord: 478..498
NoneNo IPR availableCOILSCoilCoilcoord: 677..704
NoneNo IPR availableGENE3D2.20.70.10coord: 1705..1780
e-value: 4.2E-10
score: 41.5
NoneNo IPR availableGENE3D2.20.70.10coord: 1642..1682
e-value: 9.9E-8
score: 33.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 648..670
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1605..1619
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1585..1622
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1047..1070
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1386..1424
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 790..808
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1480..1511
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 972..1082
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1386..1410
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1445..1466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 692..933
IPR001202WW domainSMARTSM00456ww_5coord: 1705..1738
e-value: 0.83
score: 17.2
coord: 1642..1675
e-value: 1.3E-4
score: 31.3
coord: 1753..1784
e-value: 3.4
score: 11.9
IPR001202WW domainPFAMPF00397WWcoord: 1646..1673
e-value: 2.4E-6
score: 27.5
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 1704..1738
score: 9.2411
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 1647..1675
score: 10.088201
IPR001202WW domainCDDcd00201WWcoord: 1647..1673
e-value: 6.5335E-6
score: 42.515
IPR001202WW domainCDDcd00201WWcoord: 1705..1738
e-value: 0.00501538
score: 34.4258
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 670..692
e-value: 190.0
score: 3.2
coord: 393..415
e-value: 44.0
score: 8.3
coord: 451..473
e-value: 26.0
score: 10.2
coord: 368..390
e-value: 6.9
score: 15.0
coord: 524..546
e-value: 200.0
score: 3.0
coord: 571..593
e-value: 21.0
score: 10.9
coord: 600..622
e-value: 23.0
score: 10.7
coord: 499..521
e-value: 16.0
score: 12.1
coord: 935..957
e-value: 1.2
score: 18.1
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 671..700
score: 7.5286
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 369..398
score: 7.6201
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 936..965
score: 8.4985
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 601..630
score: 7.3639
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 452..481
score: 8.6998
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 572..600
score: 7.7482
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 525..554
score: 7.5469
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 1644..1674

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_50contigContig_50:467589..477961 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|349854mRNA_8919Tribonema minus UTEX_B_3156 mRNAContig_50 466714..477961 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|349854|estExt_Genemark1.C_Ctg_500059 ID=Trimin1|349854|estExt_Genemark1.C_Ctg_500059|Name=jgi.p|Trimin1|349854|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1795bp
MRKLCEGAHISTLSFVSGSTVSVESFQALQVALTHGAHRAAAVRAQLESL
LRDAAPEGGGDGAPLLVPLAALQTALEARQIHLQQPWLLGGVQAGSTPGA
ANGAAVDCEKFLVAAAAAERVQAMAVHLGWTAAAYINKPIRHCQHAASVS
HEPLPLPPQVLPLGSSSSTAPLSAAPAAVAAPLPQLTAAAAAAARRRLLL
QRHFDAQLSRETPRVLRVGSGGDGGSGGGSGGDGSGGGGSTIAELRAELE
VAQAGLASLEGRIRGGMAWVQQHVGLRMPSRVSAVSRLWGAEKIRDLCAR
AEERRLAAALSRWRAHRAHAANEALALGFLRFSGAARLAALLARSARRKT
AREFAAWRAGCARARRREQDAAARLIQRMARGLTARLRVRRLRADRAAAA
IQRHVRRVQGRSRAARAAAARRGQRAAARRSAAAAAAAAAREARLLERRR
ARAAGATAVQRVARGRLARRRVQRLRALRRAEDAVAALQAAYRRRRRAQR
GSAASVLQRAIRMWEARLEGVRQRREAAAARLQALQRGRAARAEAAAARC
ELEAAAAARRAAAAAAAAEREAAAAALRIQSVARGAAARKAAAAAAHERR
LAASATRIQAAQRGAVARARTARAAAKRAQQEERRLFEEEEAQLARQRAE
AAAALAHSSSGGDEQHVTALAEAAATRLQAAQRARAARARADALRRRRDA
HTAQLEGAAEWGADAMREPGGGGGGSGRGESGEVAPAGNSAAAGKGDERV
GRSGSRHGARSQQGRGGGRHSGGGGSGGAGGRGRGAGGRSAQAQAQQSGR
SGSGEQERVKSGSGGGGARPGSKGGRPGSKGAARGSSSGSARNARGRDDA
SGRRASGGGGDDGLGRVGSAASDATRDASDAQLLADENHADDVTAGAGAA
SEAAKAGAEANTAADGMEPAVGPQAEAGDDDEAAALIRAATSIQRSFRGY
AGRDRAKAAALRRKAAAAAAAAAEAAAAQPAVSTGEEEAAATAIQAKVRQ
RRAQQRAAAARHRQRELLLSPPLTAAPAGRPASAAARGAAHANGSPGASR
PPTSTHHRAATASSSRGGSPRQAPPPAHGAAAAAALATAAEAAADAAVAA
VAVRLVQEDAQRRAELEAVAAALRAQAAAAARELAAQRAEVDALRAELQG
RRGGGAEHGGAELAAIKASLVEEASARRRDALAAAEQREREAEELRQLKA
LLLEERARATVAAEKEARLRSRAAAATAAAAAAAAADGSSAGGNAPLSDA
AHDAAEVTGRNAEGGLAVLGGGGAASGQRAGGRGATAAQLAEVRKALAAL
RAQEMAQQQRAEAEAAAAARELAALRQAMEADKEQASRAAEEVARAAAAQ
RTDLERQLQSQRAELQRGMEALAALKAAADAEAARRAKDTAAEAARREAE
EDERARQRVEQRASAATAAAARKAEADAARTRELAARGARLLAGETVELS
DDEGSDGGGGGGGADGAGAVARGSACGGGDAGGLAERRSSGSGAPANSMD
PTAAGSAGGGAAADRAAAAAAAQRADRPRPSFIRHEVEATVAAVTEARLA
ELRAAVTEMREKQRLLEEAAAAQQQAAAAAAAAAAAAAQQQRQQAPPRPA
TPSRPASAMRTQPPALASPNSIISDDRMAGAVMLTNGPASGGGGGEWLEY
WDESVGATYYYNTATQEASWTPPPSYQAGSTRPLLTDGGTNAAAAAAGGS
TTLGPAGLQWVQLWDDSAKAHYYYCAATGEATWEEPKELSAAAARAAAAP
AFENPADWVCYLDDASGAEYWYNFKTGETIRPLRVAAAAAEGVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR000048IQ_motif_EF-hand-BS
IPR036020WW_dom_sf