mRNA_8946 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|167426
Unique NamemRNA_8946
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|167426 vs. uniprot
Match: A0A835YTB2_9STRA (Ras family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTB2_9STRA)

HSP 1 Score: 405 bits (1042), Expect = 5.480e-142
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 1 
Query:    1 MTAQRNQQQRRDDDGHVYTLKFVLVGDSSVGKSQLVSRFSKNLFLPETSSTVGMEFATRELAYYGGARLKAQVWDTAGQERFHSLTQAYYRGAVGALLVYDVTSRASFEGARRWLRQIRDNAHRNIAVSLVGNKSDRGGGAQRAVTTAEGVAFAEANGMDFVETSAATGENVETAFRRLIMAVARLLPEGKRRAAXXXXXXXXXXXXXXXXXXXXXXGGTAANTPQKSTSGNSEVCS 711
            MTAQRNQQQRRDDDGHVYTLKFVLVGDSSVGKSQLVSRFSKNLFLPETSSTVGMEFATRELAYYGGARLKAQVWDTAGQERFHSLTQAYYRGAVGALLVYDVTSRASFEGARRWLRQIRDNAHRNIAVSLVGNKSDRGGGAQRAVTTAEGVAFAEANGMDFVETSAATGENVETAFRRLIMAVARLLPEGKRRAAXXXXXXXXXXXXXXXXXXXXXXGGTAANTPQKSTSGNSEVCS
Sbjct:    1 MTAQRNQQQRRDDDGHVYTLKFVLVGDSSVGKSQLVSRFSKNLFLPETSSTVGMEFATRELAYYGGARLKAQVWDTAGQERFHSLTQAYYRGAVGALLVYDVTSRASFEGARRWLRQIRDNAHRNIAVSLVGNKSDRGGGAQRAVTTAEGVAFAEANGMDFVETSAATGENVETAFRRLIMAVARLLPEGKRRAAXXXXXXXXXXXXXXXXXXXXXXGGTAANTPQKSTSGNSEVCS 237
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BLAST of jgi.p|Trimin1|167426 vs. uniprot
Match: A0A836CHB2_9STRA (Ras family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHB2_9STRA)

HSP 1 Score: 271 bits (692), Expect = 7.580e-87
Identity = 138/180 (76.67%), Postives = 158/180 (87.78%), Query Frame = 1 
Query:   40 DGHVYTLKFVLVGDSSVGKSQLVSRFSKNLFLPETSSTVGMEFATRELAYYGGARLKAQVWDTAGQERFHSLTQAYYRGAVGALLVYDVTSRASFEGARRWLRQIRDNAHRNIAVSLVGNKSDRGGGAQRAVTTAEGVAFAEANGMDFVETSAATGENVETAFRRLIMAVARLLPEGKRR 579
            +G  Y LKFVLVGD++VGKSQLV RF+++ F PE + TVGMEFATRELAYYGGARLKAQ+WDTAGQ+R+ +LTQAYYRGAVGA+LVYDVT RASF+  +RWL+Q+RDNAHRNIA+SL+ NKSD      R V TAEG+A AEA+GMDFVETSAATGENVETAFRRLIMAVARLLPEGKRR
Sbjct:   22 EGQQYVLKFVLVGDTNVGKSQLVLRFAQDQFSPEATKTVGMEFATRELAYYGGARLKAQIWDTAGQDRYSTLTQAYYRGAVGAMLVYDVTDRASFDAIKRWLKQVRDNAHRNIALSLIANKSDLAEEG-RCVPTAEGLALAEAHGMDFVETSAATGENVETAFRRLIMAVARLLPEGKRR 200
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BLAST of jgi.p|Trimin1|167426 vs. uniprot
Match: A0A835CK99_9HYME (Uncharacterized protein n=2 Tax=Pancrustacea TaxID=197562 RepID=A0A835CK99_9HYME)

HSP 1 Score: 185 bits (470), Expect = 2.070e-55
Identity = 95/177 (53.67%), Postives = 126/177 (71.19%), Query Frame = 1 
Query:   37 DDGHVYTLKFVLVGDSSVGKSQLVSRFSKNLFLPETSSTVGMEFATRELAYYGGARLKAQVWDTAGQERFHSLTQAYYRGAVGALLVYDVTSRASFEGARRWLRQIRDNAHRNIAVSLVGNKSDRGGGAQRAVTTAEGVAFAEANGMDFVETSAATGENVETAFRRLIMAVARLLPE 567
            DD + Y  K VL+GDS VGKS L+SRF++N F  E+ ST+G+EFATR +    G  +KAQ+WDTAGQER+ ++T AYYRGAVGALLVYD+    ++E   RWLR++RD+A +NI + LVGNKSD      RAV T E  AFAE NG+ F+ETSA    NVETAF+ ++  + R++ +
Sbjct:    5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH--LRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ 178
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BLAST of jgi.p|Trimin1|167426 vs. uniprot
Match: A0A0J7KI67_LASNI (Ras-related protein rab-11a n=5 Tax=Neoptera TaxID=33340 RepID=A0A0J7KI67_LASNI)

HSP 1 Score: 185 bits (470), Expect = 2.140e-55
Identity = 95/177 (53.67%), Postives = 126/177 (71.19%), Query Frame = 1 
Query:   37 DDGHVYTLKFVLVGDSSVGKSQLVSRFSKNLFLPETSSTVGMEFATRELAYYGGARLKAQVWDTAGQERFHSLTQAYYRGAVGALLVYDVTSRASFEGARRWLRQIRDNAHRNIAVSLVGNKSDRGGGAQRAVTTAEGVAFAEANGMDFVETSAATGENVETAFRRLIMAVARLLPE 567
            DD + Y  K VL+GDS VGKS L+SRF++N F  E+ ST+G+EFATR +    G  +KAQ+WDTAGQER+ ++T AYYRGAVGALLVYD+    ++E   RWLR++RD+A +NI + LVGNKSD      RAV T E  AFAE NG+ F+ETSA    NVETAF+ ++  + R++ +
Sbjct:    5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH--LRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ 178
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BLAST of jgi.p|Trimin1|167426 vs. uniprot
Match: A0A7M7GQS0_APIME (ras-related protein Rab-11A n=17 Tax=Apocrita TaxID=7400 RepID=A0A7M7GQS0_APIME)

HSP 1 Score: 185 bits (470), Expect = 2.140e-55
Identity = 95/177 (53.67%), Postives = 126/177 (71.19%), Query Frame = 1 
Query:   37 DDGHVYTLKFVLVGDSSVGKSQLVSRFSKNLFLPETSSTVGMEFATRELAYYGGARLKAQVWDTAGQERFHSLTQAYYRGAVGALLVYDVTSRASFEGARRWLRQIRDNAHRNIAVSLVGNKSDRGGGAQRAVTTAEGVAFAEANGMDFVETSAATGENVETAFRRLIMAVARLLPE 567
            DD + Y  K VL+GDS VGKS L+SRF++N F  E+ ST+G+EFATR +    G  +KAQ+WDTAGQER+ ++T AYYRGAVGALLVYD+    ++E   RWLR++RD+A +NI + LVGNKSD      RAV T E  AFAE NG+ F+ETSA    NVETAF+ ++  + R++ +
Sbjct:    5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH--LRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ 178
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BLAST of jgi.p|Trimin1|167426 vs. uniprot
Match: A0A2J7RE94_9NEOP (Ras-related protein Rab-11A n=24 Tax=Neoptera TaxID=33340 RepID=A0A2J7RE94_9NEOP)

HSP 1 Score: 185 bits (470), Expect = 6.570e-55
Identity = 95/177 (53.67%), Postives = 126/177 (71.19%), Query Frame = 1 
Query:   37 DDGHVYTLKFVLVGDSSVGKSQLVSRFSKNLFLPETSSTVGMEFATRELAYYGGARLKAQVWDTAGQERFHSLTQAYYRGAVGALLVYDVTSRASFEGARRWLRQIRDNAHRNIAVSLVGNKSDRGGGAQRAVTTAEGVAFAEANGMDFVETSAATGENVETAFRRLIMAVARLLPE 567
            DD + Y  K VL+GDS VGKS L+SRF++N F  E+ ST+G+EFATR +    G  +KAQ+WDTAGQER+ ++T AYYRGAVGALLVYD+    ++E   RWLR++RD+A +NI + LVGNKSD      RAV T E  AFAE NG+ F+ETSA    NVETAF+ ++  + R++ +
Sbjct:    5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH--LRAVPTDEAKAFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ 178
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BLAST of jgi.p|Trimin1|167426 vs. uniprot
Match: B0WAH8_CULQU (Uncharacterized protein n=28 Tax=Nematocera TaxID=7148 RepID=B0WAH8_CULQU)

HSP 1 Score: 184 bits (466), Expect = 8.590e-55
Identity = 94/177 (53.11%), Postives = 125/177 (70.62%), Query Frame = 1 
Query:   37 DDGHVYTLKFVLVGDSSVGKSQLVSRFSKNLFLPETSSTVGMEFATRELAYYGGARLKAQVWDTAGQERFHSLTQAYYRGAVGALLVYDVTSRASFEGARRWLRQIRDNAHRNIAVSLVGNKSDRGGGAQRAVTTAEGVAFAEANGMDFVETSAATGENVETAFRRLIMAVARLLPE 567
            DD + Y  K VL+GDS VGKS L+SRF++N F  E+ ST+G+EFATR +    G  +KAQ+WDTAGQER+ ++T AYYRGAVGALLVYD+    ++E   RWLR++RD+A +NI + LVGNKSD      RAV T E   FAE NG+ F+ETSA    NVETAF+ ++  + R++ +
Sbjct:    5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEV-DGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH--LRAVPTDEAKGFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQ 178
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BLAST of jgi.p|Trimin1|167426 vs. uniprot
Match: A0A1B6FDY9_9HEMI (Uncharacterized protein n=2 Tax=Proconiini TaxID=565685 RepID=A0A1B6FDY9_9HEMI)

HSP 1 Score: 183 bits (465), Expect = 1.140e-54
Identity = 95/177 (53.67%), Postives = 123/177 (69.49%), Query Frame = 1 
Query:   37 DDGHVYTLKFVLVGDSSVGKSQLVSRFSKNLFLPETSSTVGMEFATRELAYYGGARLKAQVWDTAGQERFHSLTQAYYRGAVGALLVYDVTSRASFEGARRWLRQIRDNAHRNIAVSLVGNKSDRGGGAQRAVTTAEGVAFAEANGMDFVETSAATGENVETAFRRLIMAVARLLPE 567
            D+ H Y  K VL+GDS VGKS L+SRF++N F  E+ ST+G+EFATR +    G  LKAQ+WDTAGQER+ ++T AYYRGAVGALLVYD+    ++E   RWLR++RD+A  NI + LVGNK+D      RAV T E   FAE NG+ FVETSA    NVE AF   ++A+ R++ +
Sbjct:    5 DEEHDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQV-DGKTLKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADHNIVIMLVGNKTDLRH--LRAVPTEEARGFAERNGLSFVETSALDSTNVELAFHNTLLAIYRVVSQ 178
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BLAST of jgi.p|Trimin1|167426 vs. uniprot
Match: A0A2A3ENB4_APICC (Ras-related protein Rab-11A n=1 Tax=Apis cerana cerana TaxID=94128 RepID=A0A2A3ENB4_APICC)

HSP 1 Score: 182 bits (462), Expect = 1.160e-54
Identity = 94/168 (55.95%), Postives = 121/168 (72.02%), Query Frame = 1 
Query:   37 DDGHVYTLKFVLVGDSSVGKSQLVSRFSKNLFLPETSSTVGMEFATRELAYYGGARLKAQVWDTAGQERFHSLTQAYYRGAVGALLVYDVTSRASFEGARRWLRQIRDNAHRNIAVSLVGNKSDRGGGAQRAVTTAEGVAFAEANGMDFVETSAATGENVETAFRRLI 540
            DD + Y  K VL+GDS VGKS L+SRF++N F  E+ ST+G+EFATR +    G  +KAQ+WDTAGQER+ ++T AYYRGAVGALLVYD+    ++E   RWLR++RD+A +NI + LVGNKSD      RAV T E  AFAE NG+ F+ETSA    NVETAF+ ++
Sbjct:    5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV-DGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH--LRAVPTDEAKAFAEKNGLSFIETSALDSTNVETAFQNIL 169
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BLAST of jgi.p|Trimin1|167426 vs. uniprot
Match: A0A6A4XET9_AMPAM (Ras-related protein Rab-11A n=2 Tax=Thoracicalcarea TaxID=2899756 RepID=A0A6A4XET9_AMPAM)

HSP 1 Score: 183 bits (465), Expect = 1.180e-54
Identity = 94/177 (53.11%), Postives = 126/177 (71.19%), Query Frame = 1 
Query:   37 DDGHVYTLKFVLVGDSSVGKSQLVSRFSKNLFLPETSSTVGMEFATRELAYYGGARLKAQVWDTAGQERFHSLTQAYYRGAVGALLVYDVTSRASFEGARRWLRQIRDNAHRNIAVSLVGNKSDRGGGAQRAVTTAEGVAFAEANGMDFVETSAATGENVETAFRRLIMAVARLLPE 567
            DD + Y  K VL+GDS VGKS L+SRF++N F  E+ ST+G+EFATR ++   G  +KAQ+WDTAGQER+ ++T AYYRGAVGALLVYD+    ++E   RWLR++RD+A +NI + LVGNKSD      RAV T E  AFAE N + F+ETSA    NVETAF+ ++  + R++ +
Sbjct:    6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISV-DGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHADQNIVIMLVGNKSDLRH--LRAVPTDEAKAFAERNTLSFIETSALDSTNVETAFQNILTEIYRIMSQ 179
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167426 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YTB2_9STRA5.480e-142100.00Ras family-domain-containing protein n=1 Tax=Tribo... [more]
A0A836CHB2_9STRA7.580e-8776.67Ras family-domain-containing protein n=1 Tax=Tribo... [more]
A0A835CK99_9HYME2.070e-5553.67Uncharacterized protein n=2 Tax=Pancrustacea TaxID... [more]
A0A0J7KI67_LASNI2.140e-5553.67Ras-related protein rab-11a n=5 Tax=Neoptera TaxID... [more]
A0A7M7GQS0_APIME2.140e-5553.67ras-related protein Rab-11A n=17 Tax=Apocrita TaxI... [more]
A0A2J7RE94_9NEOP6.570e-5553.67Ras-related protein Rab-11A n=24 Tax=Neoptera TaxI... [more]
B0WAH8_CULQU8.590e-5553.11Uncharacterized protein n=28 Tax=Nematocera TaxID=... [more]
A0A1B6FDY9_9HEMI1.140e-5453.67Uncharacterized protein n=2 Tax=Proconiini TaxID=5... [more]
A0A2A3ENB4_APICC1.160e-5455.95Ras-related protein Rab-11A n=1 Tax=Apis cerana ce... [more]
A0A6A4XET9_AMPAM1.180e-5453.11Ras-related protein Rab-11A n=2 Tax=Thoracicalcare... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_50contigContig_50:729839..733491 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|167426|e_gw1.50.99.1
BRITEko00000,ko00001,ko04031,ko04131,ko04147
KEGG Pathwayko04144,ko04152,ko04961,ko04962,ko04972,map04144,map04152,map04961,map04962,map04972
KEGG koko:K07904,ko:K07905
DescriptionGTPase activity
COG categoryJ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG1100@1|root,KOG0087@2759|Eukaryota
Evalue2.87e-57
Seed ortholog45157.CMD062CT
Hectar predicted targeting categoryother localisation
TranscriptId167748
TrackFilteredModels1
ProteinId167426
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167426gene_8946Tribonema minus UTEX_B_3156 geneContig_50 729839..733491 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167426Trimin1|167426|e_gw1.50.99.1Tribonema minus UTEX_B_3156 polypeptideContig_50 729839..733491 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_8946_4exon_8946_4Tribonema minus UTEX_B_3156 exonContig_50 729839..730063 -
exon_8946_3exon_8946_3Tribonema minus UTEX_B_3156 exonContig_50 730887..731159 -
exon_8946_2exon_8946_2Tribonema minus UTEX_B_3156 exonContig_50 731931..732044 -
exon_8946_1exon_8946_1Tribonema minus UTEX_B_3156 exonContig_50 733390..733491 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_8946CDS_8946Tribonema minus UTEX_B_3156 CDSContig_50 733390..733491 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_8946 ID=mRNA_8946|Name=jgi.p|Trimin1|167426|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=714bp|location=Sequence derived from alignment at Contig_50:729839..733491- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACAGCTCAAAGGAATCAGCAGCAGAGGCGGGACGACGACGGGCATGT
GTACACGCTGAAGTTTGTGCTTGTGGGGGACTCGAGTGTTGGCAAGAGCC
AGCTCGTCTCCCGCTTCTCCAAGAACCTGTTCCTGCCGGAGACATCGTCC
ACAGTGGGCATGGAGTTTGCCACGCGCGAGCTTGCGTACTACGGCGGCGC
GCGACTCAAGGCACAGGTCTGGGACACGGCGGGCCAGGAGCGGTTCCACA
GCCTCACGCAGGCGTACTACCGCGGCGCAGTGGGCGCGCTGCTCGTCTAC
GACGTGACGAGCCGCGCCAGCTTCGAAGGCGCGCGGCGCTGGCTGCGCCA
GATCCGCGACAACGCGCACAGGAACATCGCCGTGTCGCTCGTAGGGAACA
AGAGCGACAGGGGCGGCGGCGCGCAGCGCGCGGTGACGACGGCGGAGGGC
GTCGCGTTCGCGGAGGCAAATGGCATGGACTTTGTCGAGACGAGCGCTGC
CACAGGGGAAAACGTCGAAACTGCGTTCCGGCGGCTAATCATGGCGGTGG
CGCGGCTGCTGCCGGAAGGCAAGCGGCGCGCCGCCGCGGCCGTCGTGGAG
GCGGATGCTGCTGCTGCTGCTGCGGCGGCGACGGCGGCAGTGGCAGTGGC
GGGGGGCACCGCCGCCAACACGCCGCAGAAGAGCACCAGCGGCAACAGCG
AGGTGTGTTCATGA
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protein sequence of jgi.p|Trimin1|167426

>Trimin1|167426|e_gw1.50.99.1 ID=Trimin1|167426|e_gw1.50.99.1|Name=jgi.p|Trimin1|167426|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=238bp
MTAQRNQQQRRDDDGHVYTLKFVLVGDSSVGKSQLVSRFSKNLFLPETSS
TVGMEFATRELAYYGGARLKAQVWDTAGQERFHSLTQAYYRGAVGALLVY
DVTSRASFEGARRWLRQIRDNAHRNIAVSLVGNKSDRGGGAQRAVTTAEG
VAFAEANGMDFVETSAATGENVETAFRRLIMAVARLLPEGKRRAAAAVVE
ADAAAAAAAATAAVAVAGGTAANTPQKSTSGNSEVCS*
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mRNA from alignment at Contig_50:729839..733491-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_8946 ID=mRNA_8946|Name=jgi.p|Trimin1|167426|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3653bp|location=Sequence derived from alignment at Contig_50:729839..733491- (Tribonema minus UTEX_B_3156 )
ATGACAGCTCAAAGGAATCAGCAGCAGAGGCGGGACGACGACGGGCATGT
GTACACGCTGAAGTTTGTGCTTGTGGGGGACTCGAGTGTTGGCAAGAGCC
AGGTGAGAACCAAGCAATGCGCGTCATGTCGCACTCATGAGGAGCGCCAG
CAGCCTCCTGTGCTGTCCAGTACCTGAGTTGGCAATTCTTGCGATCTCCA
AGTGCAGGTTTTTTTATGAGAAAAGTTCAACTGCATAGATTCAAGCATTC
TTTGTGGAAAGCGTCTTCGCTTTGTGAGTCCACATGGGTTGCAGATGATG
TCTTGGTGCAGTCTCAAACACGTGTGGCCACCTGCTCTGTCCACAAGTGG
GTTTCGTCAAGCGTGTCCGCAGCATCTGAGCGGCCTACAGTAGTCCGCGT
GGGTGATGCGCTGCGACCCCTTACATACTGTGATCCCCCTTGCATGAAAC
TCAGTGAAGGCCTTCTCAGTTCAGTGTAAATCTGGTCCGTGGATAGGCAG
ACTGCAGTCCCACTCTGGTACACTGTGGGTACAGTGGACGCTATGTCTGC
AGCAGTGCACACTCAAGCAACAAGAACGGCAAGCCCGATCCTATCCTCAG
CCTTCTTGATCCAGTCCCCTGTTGAGCAACGCTTCCAGCAGTTGACATGA
GCAATGACAAACGCCGGTTCCTGCACTCAGTCTGCGTGCCCATTCCCCAA
CGAGCTGCACATGTGGCCATGGACACGGGTCATTTGACAAGAGCTGAGAG
TTGCGCACCCGAACGCGCTGAGCGTTGCCAACCAGAGTGCTGAGCGCTGC
ACATCAGAGTGCTGAGCGCTGCACACTTCAGCGCTGAGCGTTGCACACCT
GCAAGTGCAGGTGCCGGGTCATGTGCACCTTGAATTAACATGAACCGCAA
GGACCTGGAGCGGGCTCGGGCGCAAAGTGGACAAGCAAGCGTGCGTGACA
ATGATATCATGACAGTGGACATGGAGCGCTGCCCACCAGAGTGCTGAGCG
TTGCCTACCAGCTCGCTGAGTGCTGCACACAAAAACAATCTGCACCGAAG
CGCTGTCCATGTGGAAGGTTGAGCGCGGCGCCCGCGAGCGTGTCCCTCTG
TCTCCATGCACCGTTTGCGCCCCCGCGCGCAGCCCCTTCTCGCAGCGCGG
CTCAGCGCCAGTGGCATCGAGCGGCATCAATCTCTCAGGCGCTCTGAGAG
CGAACCAGCTTGGAGTGTTTAGCTCTGCCTGCGACAATTCATTGCTGCAC
TCATCTATTTATTCATGTACAAACACAAGCTTGTTGGACTTCACATCAGC
CTGGTGCAAGCGTTGACGTGCCCCCCCCCCCCCCCCCCCCTCGCTTCTGC
CCACCACAAACGTAAGCTCGACGACCTTCACAGCAGCTCGGGGCAAGCTC
ACAAGCCCCCCCCCCCCCCCCCCCCTCCCCTCCGTGTGCGTGTGTAGCTC
GTCTCCCGCTTCTCCAAGAACCTGTTCCTGCCGGAGACATCGTCCACAGT
GGGCATGGAGTTTGCCACGCGCGAGCTTGCGTACTACGGCGGCGCGCGAC
TCAAGGCACAGGTGAGGGTTTGGGGGGGGGGGGGGTAACAGCACACAATA
CATTTCGTTCGCGCAAACGTCTGAGCCGCTCCACAGCCTACCGCATACTC
CGCAATTGAAGTAGCGACCAGCTGCTGCTGGTGAGACATACATACCTTGT
TCGCATTTTGCGGCGCTGGCTCAGGCCTGGGACACAGCGGGGCATGAGCA
TTTCCACAGCATCCTGTTTACTTCAAATGTGAAGTAATACACCGCATGGG
GAGTCACCTGATCAGCACACGCACGCTCACATGGGTTCCCTAGCGCCGCA
GGTCAGGGACACGGCGGGGCAGGAGTCCTCCCACATCCTCTTACTGTATA
CTTCAAAATTGAAGTAATACACCTGACCCGTGCGCGCGCACTCTCACACG
CATCGCAGGTCTGGGACACGGCGGGCCAGGAGCGGTTCCACAGCCTGACG
CAGGCGTACTGCCGCGGCGCCGTGGGCGCGCTGCTCGCGTACGACGTCAC
ACTTGAAGTACGCTGCTCGTGTACGACGGCACACTTGAAGTACAACTCAA
GGTCGAGCCACCCGTACGCGCGACGTTCGCAGGTCTGGGACACCGCGGGA
CAGGAGCGCTTTCACAGCCTGACGCAGGCGTACTACCGCGGCGCCGTGGG
CGCGCTGCTTGTGCACGAACGTCACACTTGAAGTACGCTGCTCGTGTACG
ACATCGCACTTGAAGTACGACTCAAAGTTGAGTCACCTGTACCCTGACTT
GCATGCACGCGCGTGCGCCCCTCGCGCCGCAGGTCTGGGACACGGCGGGC
CAGGAGCGGTTCCACAGCCTCACGCAGGCGTACTACCGCGGCGCAGTGGG
CGCGCTGCTCGTCTACGACGTGACGAGCCGCGCCAGCTTCGAAGGCGCGC
GGCGCTGGCTGCGCCAGATCCGCGACAACGCGCACAGGAACATCGCCGTG
TCGCTCGTAGGGAACAAGAGCGACAGGGGCGGCGGCGCGCAGCGCGCGGT
GACGACGGCGGAGGGCGTCGCGTTCGCGGAGGCAAATGGCATGGACTTTG
TCGAGGTGCGTGCGGCGGCGCGCGCGCTAGCGCATGTGTGCGCGCTGCGT
TATGTCTGTGATCGAGCTGCTGGGCCTGTAGTGCTAGCTGCTGCTGGTGG
TGGTGGTGGTGGTGCTGCTGCCGTTGCTGCGGCTGCGGCTGCTGCTGGTG
GGGGTGGTGCTGCTGCCGCTGCTGGTGGTGGTGGTGGTGGTAGTGATGGT
GCTGCAGGGTGCGCATCCGATCTTGTGGATGCGCAGAGTTTACAGTCTGT
AGAAGCGGTGAGGTGTGTACAGTAGCTGAGCCGTGATGGCAGCACAGGCA
TAAGGGGGGTGGGGAGGGGCAATGGCATGCAAACTGTCAGGTGTGGCATG
TTTCAGGGTACTCGTGTATCAGATGTTGCAAGCGTACATGCATACTGGTA
CCATGCTGAGGGCGTGCCGGCAGAAACCTAACCCTAACCCTAACCCAAGC
GCGCTGACTGTTCGCAGTCGCTTAAGCAGGTGGCTGCTGCAGCAGGCACT
GCGGCGGGGCACGGCGACTGCGTCCAAAAAGCGCCCGTGTCAAGTATTTG
CTGGATGCCATGCGGGACGCGCGCCTTAGCATCTGAACCTTAAACTTGAA
GTGCACATAATCTGTCTCCGCTGACGCACCGCTGCCGCTGCAGCTTGGAC
TGCGCGCAGAGCGCAGTAACCGGCGCTGAAGCTTCATGCGCGCGTGACAT
GCAGCAGCGCTGCGGGCGCACCTGCAGCAGCATCAGCCTAGGCCGCCACC
CACGGGCACCCTCACACTCGCGCGCACTCTCAGTCATTGGTGAGCTCACC
TCTTCAAGTTAAACTTGCTTGCATGCAGACGAGCGCTGCCACAGGGGAAA
ACGTCGAAACTGCGTTCCGGCGGCTAATCATGGCGGTGGCGCGGCTGCTG
CCGGAAGGCAAGCGGCGCGCCGCCGCGGCCGTCGTGGAGGCGGATGCTGC
TGCTGCTGCTGCGGCGGCGACGGCGGCAGTGGCAGTGGCGGGGGGCACCG
CCGCCAACACGCCGCAGAAGAGCACCAGCGGCAACAGCGAGGTGTGTTCA
TGA
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Coding sequence (CDS) from alignment at Contig_50:729839..733491-

>mRNA_8946 ID=mRNA_8946|Name=jgi.p|Trimin1|167426|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=714bp|location=Sequence derived from alignment at Contig_50:729839..733491- (Tribonema minus UTEX_B_3156 )
ATGACAGCTCAAAGGAATCAGCAGCAGAGGCGGGACGACGACGGGCATGT
GTACACGCTGAAGTTTGTGCTTGTGGGGGACTCGAGTGTTGGCAAGAGCC
AGCTCGTCTCCCGCTTCTCCAAGAACCTGTTCCTGCCGGAGACATCGTCC
ACAGTGGGCATGGAGTTTGCCACGCGCGAGCTTGCGTACTACGGCGGCGC
GCGACTCAAGGCACAGGTCTGGGACACGGCGGGCCAGGAGCGGTTCCACA
GCCTCACGCAGGCGTACTACCGCGGCGCAGTGGGCGCGCTGCTCGTCTAC
GACGTGACGAGCCGCGCCAGCTTCGAAGGCGCGCGGCGCTGGCTGCGCCA
GATCCGCGACAACGCGCACAGGAACATCGCCGTGTCGCTCGTAGGGAACA
AGAGCGACAGGGGCGGCGGCGCGCAGCGCGCGGTGACGACGGCGGAGGGC
GTCGCGTTCGCGGAGGCAAATGGCATGGACTTTGTCGAGACGAGCGCTGC
CACAGGGGAAAACGTCGAAACTGCGTTCCGGCGGCTAATCATGGCGGTGG
CGCGGCTGCTGCCGGAAGGCAAGCGGCGCGCCGCCGCGGCCGTCGTGGAG
GCGGATGCTGCTGCTGCTGCTGCGGCGGCGACGGCGGCAGTGGCAGTGGC
GGGGGGCACCGCCGCCAACACGCCGCAGAAGAGCACCAGCGGCAACAGCG
AGGTGTGTTCATGA
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