Trimin1|347407|estExt_Genemark1.C_Ctg_110140 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|347407
Unique Name	Trimin1\|347407\|estExt_Genemark1.C_Ctg_110140
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	662

Homology

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BLAST of jgi.p|Trimin1|347407 vs. uniprot
Match: A0A835ZFI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFI8_9STRA)

HSP 1 Score: 1132 bits (2927), Expect = 0.000e+0
Identity = 661/661 (100.00%), Postives = 661/661 (100.00%), Query Frame = 0

Query:    1 MPLRKCTITAAWRAKGCMTDALIIEPKGARRKAEGEVPETATLAASPAAATPAACGGTSVLDGGHSPVLPRVAPPLTTASAPAXXXXXXXXXXXXXXXXAASVGSSTAGQTGATSSNSGRASPPSPLAXXXXXXXXXXXXXXXXXLVPPRAGHECILAAQTNFIRVFPFQQYDARLQPGSAALDGLKELLRGEHVVGFIGLAVHHLYWALLRPHGAALRRRRASLDAAERDSRVRSGAAYRSTSGEGAALSTWSCGSAEQGRLPSDSRCGGGSSEGTINTPPPPLPADDDGDADPTGITRDERDALFAAAVQAFARXXXXXXXXXXXXXXLPIVTLSIREGLEAVLASEYAYLSAAADGGALLAVLHAEVAARFILPYFYAPAXXXXXLHVASPXXXRRGGAAHGSPRTLRHRDGGGVGVAGTETLSAAAIHLSADASTAASXXPTATSSCGAQLQHQLHASAHATAGCCSGGKREHDITGAASLAEAYFCTSAAVSYMFPEPQSPQARLVRHMMAARQGIKACGDGRSAQRPATTDAPISSAAPPPGEPVRIGAHYRAQLHGSYIQQLRTEYAAQFRRKHNPEGAPRRIPFLPNDDSCPYPYCLYYRTATITTTTLPKLARRTALLSPRTPRSAGTPRSDPADVGDAFRAGATKPMWTRM 661
            MPLRKCTITAAWRAKGCMTDALIIEPKGARRKAEGEVPETATLAASPAAATPAACGGTSVLDGGHSPVLPRVAPPLTTASAPAXXXXXXXXXXXXXXXXAASVGSSTAGQTGATSSNSGRASPPSPLAXXXXXXXXXXXXXXXXXLVPPRAGHECILAAQTNFIRVFPFQQYDARLQPGSAALDGLKELLRGEHVVGFIGLAVHHLYWALLRPHGAALRRRRASLDAAERDSRVRSGAAYRSTSGEGAALSTWSCGSAEQGRLPSDSRCGGGSSEGTINTPPPPLPADDDGDADPTGITRDERDALFAAAVQAFARXXXXXXXXXXXXXXLPIVTLSIREGLEAVLASEYAYLSAAADGGALLAVLHAEVAARFILPYFYAPAXXXXXLHVASPXXXRRGGAAHGSPRTLRHRDGGGVGVAGTETLSAAAIHLSADASTAASXXPTATSSCGAQLQHQLHASAHATAGCCSGGKREHDITGAASLAEAYFCTSAAVSYMFPEPQSPQARLVRHMMAARQGIKACGDGRSAQRPATTDAPISSAAPPPGEPVRIGAHYRAQLHGSYIQQLRTEYAAQFRRKHNPEGAPRRIPFLPNDDSCPYPYCLYYRTATITTTTLPKLARRTALLSPRTPRSAGTPRSDPADVGDAFRAGATKPMWTRM
Sbjct:    1 MPLRKCTITAAWRAKGCMTDALIIEPKGARRKAEGEVPETATLAASPAAATPAACGGTSVLDGGHSPVLPRVAPPLTTASAPAXXXXXXXXXXXXXXXXAASVGSSTAGQTGATSSNSGRASPPSPLAXXXXXXXXXXXXXXXXXLVPPRAGHECILAAQTNFIRVFPFQQYDARLQPGSAALDGLKELLRGEHVVGFIGLAVHHLYWALLRPHGAALRRRRASLDAAERDSRVRSGAAYRSTSGEGAALSTWSCGSAEQGRLPSDSRCGGGSSEGTINTPPPPLPADDDGDADPTGITRDERDALFAAAVQAFARXXXXXXXXXXXXXXLPIVTLSIREGLEAVLASEYAYLSAAADGGALLAVLHAEVAARFILPYFYAPAXXXXXLHVASPXXXRRGGAAHGSPRTLRHRDGGGVGVAGTETLSAAAIHLSADASTAASXXPTATSSCGAQLQHQLHASAHATAGCCSGGKREHDITGAASLAEAYFCTSAAVSYMFPEPQSPQARLVRHMMAARQGIKACGDGRSAQRPATTDAPISSAAPPPGEPVRIGAHYRAQLHGSYIQQLRTEYAAQFRRKHNPEGAPRRIPFLPNDDSCPYPYCLYYRTATITTTTLPKLARRTALLSPRTPRSAGTPRSDPADVGDAFRAGATKPMWTRM 661

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347407 vs. uniprot

BLAST of jgi.p|Trimin1|347407 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZFI8_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 261..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 526..547
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 623..649
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 391..416

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_11	contig	Contig_11:1255358..1264042 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347407	mRNA_4824	Tribonema minus UTEX_B_3156	mRNA	Contig_11 1254986..1264042 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|347407|estExt_Genemark1.C_Ctg_110140 ID=Trimin1|347407|estExt_Genemark1.C_Ctg_110140|Name=jgi.p|Trimin1|347407|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=662bp
MPLRKCTITAAWRAKGCMTDALIIEPKGARRKAEGEVPETATLAASPAAA
TPAACGGTSVLDGGHSPVLPRVAPPLTTASAPAAAVAAPVSTPSAMPMAA
ASVGSSTAGQTGATSSNSGRASPPSPLAAAGGAAAAAAAVAEAALLVPPR
AGHECILAAQTNFIRVFPFQQYDARLQPGSAALDGLKELLRGEHVVGFIG
LAVHHLYWALLRPHGAALRRRRASLDAAERDSRVRSGAAYRSTSGEGAAL
STWSCGSAEQGRLPSDSRCGGGSSEGTINTPPPPLPADDDGDADPTGITR
DERDALFAAAVQAFARARAAAARAAAAAAALPIVTLSIREGLEAVLASEY
AYLSAAADGGALLAVLHAEVAARFILPYFYAPAPAPLPLHVASPPPPRRG
GAAHGSPRTLRHRDGGGVGVAGTETLSAAAIHLSADASTAASAAPTATSS
CGAQLQHQLHASAHATAGCCSGGKREHDITGAASLAEAYFCTSAAVSYMF
PEPQSPQARLVRHMMAARQGIKACGDGRSAQRPATTDAPISSAAPPPGEP
VRIGAHYRAQLHGSYIQQLRTEYAAQFRRKHNPEGAPRRIPFLPNDDSCP
YPYCLYYRTATITTTTLPKLARRTALLSPRTPRSAGTPRSDPADVGDAFR
AGATKPMWTRM*