mRNA_4824 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|347407
Unique Name	mRNA_4824
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|347407 vs. uniprot
Match: A0A835ZFI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFI8_9STRA)

HSP 1 Score: 1130 bits (2924), Expect = 0.000e+0
Identity = 661/661 (100.00%), Postives = 661/661 (100.00%), Query Frame = 1

Query:    1 MPLRKCTITAAWRAKGCMTDALIIEPKGARRKAEGEVPETATLAASPAAATPAACGGTSVLDGGHSPVLPRVAPPLTTASAPAXXXXXXXXXXXXXXXXAASVGSSTAGQTGATSSNSGRASPPSPLAXXXXXXXXXXXXXXXXXLVPPRAGHECILAAQTNFIRVFPFQQYDARLQPGSAALDGLKELLRGEHVVGFIGLAVHHLYWALLRPHGAALRRRRASLDAAERDSRVRSGAAYRSTSGEGAALSTWSCGSAEQGRLPSDSRCGGGSSEGTINTPPPPLPADDDGDADPTGITRDERDALFAAAVQAFARXXXXXXXXXXXXXXLPIVTLSIREGLEAVLASEYAYLSAAADGGALLAVLHAEVAARFILPYFYAPAXXXXXLHVASPXXXRRGGAAHGSPRTLRHRDGGGVGVAGTETLSAAAIHLSADASTAASXXPTATSSCGAQLQHQLHASAHATAGCCSGGKREHDITGAASLAEAYFCTSAAVSYMFPEPQSPQARLVRHMMAARQGIKACGDGRSAQRPATTDAPISSAAPPPGEPVRIGAHYRAQLHGSYIQQLRTEYAAQFRRKHNPEGAPRRIPFLPNDDSCPYPYCLYYRTATITTTTLPKLARRTALLSPRTPRSAGTPRSDPADVGDAFRAGATKPMWTRM 1983
            MPLRKCTITAAWRAKGCMTDALIIEPKGARRKAEGEVPETATLAASPAAATPAACGGTSVLDGGHSPVLPRVAPPLTTASAPAXXXXXXXXXXXXXXXXAASVGSSTAGQTGATSSNSGRASPPSPLAXXXXXXXXXXXXXXXXXLVPPRAGHECILAAQTNFIRVFPFQQYDARLQPGSAALDGLKELLRGEHVVGFIGLAVHHLYWALLRPHGAALRRRRASLDAAERDSRVRSGAAYRSTSGEGAALSTWSCGSAEQGRLPSDSRCGGGSSEGTINTPPPPLPADDDGDADPTGITRDERDALFAAAVQAFARXXXXXXXXXXXXXXLPIVTLSIREGLEAVLASEYAYLSAAADGGALLAVLHAEVAARFILPYFYAPAXXXXXLHVASPXXXRRGGAAHGSPRTLRHRDGGGVGVAGTETLSAAAIHLSADASTAASXXPTATSSCGAQLQHQLHASAHATAGCCSGGKREHDITGAASLAEAYFCTSAAVSYMFPEPQSPQARLVRHMMAARQGIKACGDGRSAQRPATTDAPISSAAPPPGEPVRIGAHYRAQLHGSYIQQLRTEYAAQFRRKHNPEGAPRRIPFLPNDDSCPYPYCLYYRTATITTTTLPKLARRTALLSPRTPRSAGTPRSDPADVGDAFRAGATKPMWTRM
Sbjct:    1 MPLRKCTITAAWRAKGCMTDALIIEPKGARRKAEGEVPETATLAASPAAATPAACGGTSVLDGGHSPVLPRVAPPLTTASAPAXXXXXXXXXXXXXXXXAASVGSSTAGQTGATSSNSGRASPPSPLAXXXXXXXXXXXXXXXXXLVPPRAGHECILAAQTNFIRVFPFQQYDARLQPGSAALDGLKELLRGEHVVGFIGLAVHHLYWALLRPHGAALRRRRASLDAAERDSRVRSGAAYRSTSGEGAALSTWSCGSAEQGRLPSDSRCGGGSSEGTINTPPPPLPADDDGDADPTGITRDERDALFAAAVQAFARXXXXXXXXXXXXXXLPIVTLSIREGLEAVLASEYAYLSAAADGGALLAVLHAEVAARFILPYFYAPAXXXXXLHVASPXXXRRGGAAHGSPRTLRHRDGGGVGVAGTETLSAAAIHLSADASTAASXXPTATSSCGAQLQHQLHASAHATAGCCSGGKREHDITGAASLAEAYFCTSAAVSYMFPEPQSPQARLVRHMMAARQGIKACGDGRSAQRPATTDAPISSAAPPPGEPVRIGAHYRAQLHGSYIQQLRTEYAAQFRRKHNPEGAPRRIPFLPNDDSCPYPYCLYYRTATITTTTLPKLARRTALLSPRTPRSAGTPRSDPADVGDAFRAGATKPMWTRM 661

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347407 vs. uniprot

BLAST of jgi.p|Trimin1|347407 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZFI8_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_11	contig	Contig_11:1254986..1264042 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|347407\|estExt_Genemark1.C_Ctg_110140
Hectar predicted targeting category	other localisation
TranscriptId	347729
Track	FilteredModels1
ProteinId	347407

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347407	gene_4824	Tribonema minus UTEX_B_3156	gene	Contig_11 1254986..1264042 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347407	Trimin1\|347407\|estExt_Genemark1.C_Ctg_110140	Tribonema minus UTEX_B_3156	polypeptide	Contig_11 1255358..1264042 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_4824_8	exon_4824_8	Tribonema minus UTEX_B_3156	exon	Contig_11 1254986..1255486 -
exon_4824_7	exon_4824_7	Tribonema minus UTEX_B_3156	exon	Contig_11 1255940..1256044 -
exon_4824_6	exon_4824_6	Tribonema minus UTEX_B_3156	exon	Contig_11 1256149..1256291 -
exon_4824_5	exon_4824_5	Tribonema minus UTEX_B_3156	exon	Contig_11 1258699..1258777 -
exon_4824_4	exon_4824_4	Tribonema minus UTEX_B_3156	exon	Contig_11 1259999..1260264 -
exon_4824_3	exon_4824_3	Tribonema minus UTEX_B_3156	exon	Contig_11 1261101..1261538 -
exon_4824_2	exon_4824_2	Tribonema minus UTEX_B_3156	exon	Contig_11 1262686..1262894 -
exon_4824_1	exon_4824_1	Tribonema minus UTEX_B_3156	exon	Contig_11 1263426..1264042 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_4824	UTR3_4824	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_11 1254986..1255357 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_4824	CDS_4824	Tribonema minus UTEX_B_3156	CDS	Contig_11 1263426..1264042 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_11:1254986..1264042-
coding sequence from alignment at Contig_11:1254986..1264042-

spliced messenger RNA

>mRNA_4824 ID=mRNA_4824|Name=jgi.p|Trimin1|347407|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2358bp|location=Sequence derived from alignment at Contig_11:1254986..1264042- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGCTGCGGAAGTGCACCATCACCGCGGCGTGGCGGGCGAAAGGGTG
CATGACAGATGCGCTGATCATAGAGCCGAAGGGGGCCAGACGCAAGGCTG
AGGGCGAGGTGCCAGAGACAGCGACACTTGCTGCATCGCCAGCAGCGGCG
ACGCCCGCTGCGTGCGGCGGAACCTCCGTTCTCGACGGCGGTCACAGCCC
CGTGCTGCCTCGCGTTGCGCCCCCCCTTACCACTGCGTCAGCGCCAGCAG
CAGCAGTAGCAGCACCGGTATCCACGCCGTCAGCCATGCCAATGGCAGCA
GCGTCAGTAGGCAGCAGTACCGCAGGTCAGACCGGCGCCACCAGCAGCAA
CAGCGGCAGGGCGTCGCCGCCGTCGCCGCTCGCGGCAGCCGGCGGCGCCG
CGGCAGCGGCAGCGGCGGTGGCGGAGGCGGCGCTCCTCGTGCCGCCGCGC
GCGGGCCACGAGTGCATCCTGGCGGCGCAGACCAACTTCATCCGCGTGTT
CCCGTTCCAGCAGTACGACGCGCGGCTGCAGCCTGGCTCAGCAGCGCTCG
ACGGTCTCAAGGAGCTGCTGCGCGGCGAGCACGTCGTCGGCTTCATCGGC
CTCGCCGTGCACCACCTCTACTGGGCGCTGCTGCGGCCGCACGGCGCGGC
GCTGCGGCGGCGTCGGGCGAGCCTCGACGCTGCGGAGCGCGACAGCAGAG
TGCGCAGCGGCGCCGCGTACCGCAGCACGAGCGGCGAGGGGGCAGCGCTC
AGCACATGGTCGTGCGGCTCAGCGGAGCAGGGGCGCTTGCCGAGTGACTC
GCGGTGCGGCGGCGGTAGCTCGGAAGGCACAATCAACACACCGCCGCCGC
CGCTGCCCGCCGACGATGACGGCGACGCCGACCCGACGGGCATCACGCGC
GACGAGCGCGACGCGCTGTTCGCGGCGGCCGTGCAGGCGTTCGCGCGCGC
GCGCGCGGCGGCGGCGCGCGCTGCCGCGGCGGCGGCGGCGCTGCCGATCG
TCACGCTGAGCATCCGCGAGGGCCTCGAGGCGGTGCTCGCGAGCGAGTAC
GCGTACCTGAGCGCTGCTGCAGACGGCGGAGCGCTGCTGGCGGTGCTGCA
CGCCGAGGTCGCGGCGCGCTTCATACTGCCGTACTTCTACGCGCCGGCGC
CGGCGCCGCTGCCGCTGCACGTGGCGTCACCGCCGCCGCCGCGGCGCGGC
GGCGCGGCGCACGGCAGCCCGCGCACGCTGCGGCATCGCGACGGCGGCGG
CGTAGGCGTGGCAGGCACCGAAACGTTGAGCGCTGCTGCCATCCACCTCA
GCGCCGACGCCAGCACGGCCGCCTCCGCGGCGCCGACAGCAACTTCATCT
TGTGGTGCGCAACTTCAACATCAACTTCACGCGAGCGCGCACGCGACGGC
GGGGTGCTGCAGCGGCGGCAAGCGCGAGCACGACATCACCGGCGCCGCCA
GCCTGGCGGAGGCGTACTTCTGCACCAGCGCGGCAGTCAGCTACATGTTC
CCGGAGCCGCAGAGCCCGCAGGCAAGGCTTGTGCGACACATGATGGCCGC
GAGGCAGGGCATTAAGGCGTGCGGCGACGGGCGCAGCGCGCAGCGGCCGG
CCACCACAGATGCACCAATTTCGAGCGCCGCGCCGCCGCCGGGGGAGCCC
GTGCGCATCGGCGCGCACTACCGCGCTCAGCTGCACGGCAGTTACATCCA
GCAGTTACGGACGGAGTACGCGGCGCAGTTCCGGCGGAAGCACAACCCAG
AGGGTGCGCCTAGGCGCATCCCATTCCTACCCAACGACGACAGCTGCCCC
TACCCCTACTGCCTCTACTATCGCACTGCTACCATTACCACTACTACCCT
CCCCAAGCTGGCGAGGCGCACTGCGCTGCTCTCCCCCAGAACGCCCCGCA
GCGCCGGCACGCCACGCAGTGACCCCGCTGACGTCGGGGACGCTTTCAGG
GCGGGCGCAACGAAGCCGATGTGGACACGCATGTAGCGCGGGGCTGCTAC
AGTATACGCACCTTTACGCGCAGCCGCTACCGGCTTCCGTCTAAGGATTG
AACTTTGGAACTCATGATGGCAGAGGAGTGCGTCAGAAGGTGCATTGTCA
CGGTGCGTTGCATTGGAGTTAAAGCATGGGCTCTGTATGGTAGGGGGAGC
GGCAACGATGCAAGGAATAGCCGACACACGCCGGAGGTTCTGAGGTCGCT
CCATGACAGCGCAACACTCTAGTCTGCATACACTGAAGCGGTTGGGTTAC
GTGCTCGGCACAAAAAGCGTACATAAAAATCTGGCCCAGCCCTCTGCCCA
GTTGTGCGCGCATCCTTTACGCCAGCCTCAAAGAGGCTGCAGCATCAATG
ATGTACCC

protein sequence of jgi.p|Trimin1|347407

>Trimin1|347407|estExt_Genemark1.C_Ctg_110140 ID=Trimin1|347407|estExt_Genemark1.C_Ctg_110140|Name=jgi.p|Trimin1|347407|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=662bp
MPLRKCTITAAWRAKGCMTDALIIEPKGARRKAEGEVPETATLAASPAAA
TPAACGGTSVLDGGHSPVLPRVAPPLTTASAPAAAVAAPVSTPSAMPMAA
ASVGSSTAGQTGATSSNSGRASPPSPLAAAGGAAAAAAAVAEAALLVPPR
AGHECILAAQTNFIRVFPFQQYDARLQPGSAALDGLKELLRGEHVVGFIG
LAVHHLYWALLRPHGAALRRRRASLDAAERDSRVRSGAAYRSTSGEGAAL
STWSCGSAEQGRLPSDSRCGGGSSEGTINTPPPPLPADDDGDADPTGITR
DERDALFAAAVQAFARARAAAARAAAAAAALPIVTLSIREGLEAVLASEY
AYLSAAADGGALLAVLHAEVAARFILPYFYAPAPAPLPLHVASPPPPRRG
GAAHGSPRTLRHRDGGGVGVAGTETLSAAAIHLSADASTAASAAPTATSS
CGAQLQHQLHASAHATAGCCSGGKREHDITGAASLAEAYFCTSAAVSYMF
PEPQSPQARLVRHMMAARQGIKACGDGRSAQRPATTDAPISSAAPPPGEP
VRIGAHYRAQLHGSYIQQLRTEYAAQFRRKHNPEGAPRRIPFLPNDDSCP
YPYCLYYRTATITTTTLPKLARRTALLSPRTPRSAGTPRSDPADVGDAFR
AGATKPMWTRM*

mRNA from alignment at Contig_11:1254986..1264042-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4824 ID=mRNA_4824|Name=jgi.p|Trimin1|347407|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9057bp|location=Sequence derived from alignment at Contig_11:1254986..1264042- (Tribonema minus UTEX_B_3156 )
ATGCCGCTGCGGAAGTGCACCATCACCGCGGCGTGGCGGGCGAAAGGGTG
CATGACAGATGCGCTGATCATAGAGCCGAAGGGGGCCAGACGCAAGGCTG
AGGGCGAGGTGCCAGAGACAGCGACACTTGCTGCATCGCCAGCAGCGGCG
ACGCCCGCTGCGTGCGGCGGAACCTCCGTTCTCGACGGCGGTCACAGCCC
CGTGCTGCCTCGCGTTGCGCCCCCCCTTACCACTGCGTCAGCGCCAGCAG
CAGCAGTAGCAGCACCGGTATCCACGCCGTCAGCCATGCCAATGGCAGCA
GCGTCAGTAGGCAGCAGTACCGCAGGTCAGACCGGCGCCACCAGCAGCAA
CAGCGGCAGGGCGTCGCCGCCGTCGCCGCTCGCGGCAGCCGGCGGCGCCG
CGGCAGCGGCAGCGGCGGTGGCGGAGGCGGCGCTCCTCGTGCCGCCGCGC
GCGGGCCACGAGTGCATCCTGGCGGCGCAGACCAACTTCATCCGCGTGTT
CCCGTTCCAGCAGTACGACGCGCGGCTGCAGCCTGGCTCAGCAGCGCTCG
ACGGTCTCAAGGAGCTGCTGCGCGGCGAGCACGTCGTCGGCTTCATCGGC
CTCGCCGTGCACCACCTGTGAGTGTCGTAAGCACGCTGCGGCACCTGTGA
GTGTCTTGCCTAGCGCTGAGCACAGCTGCTCGTGGTGCACTGCTGTGAGC
ATGGCTCCAGCACAAACCTACCTGTGAGTGTCGCGAATGCTGAGCACGGC
TGCTCATGGCGCACCGCGTGTGCGCATTGCTCAACCGCAAATGCACCTGT
GACTGAGCACAGGTGCTCAGGGCGCACCGCGCGGTGCACCACCTGTGAGT
GTCGTCGCAATGCCGAGAGCACAGCTGCAGCCGCTCCCGCACAACATCAG
TTGTCCCCTCTACGAAGCTCGTGACAGCTGCTTGTTCTGATCACCGAGCA
CGGCTGCTCATGGCGCACCACCTGTGAGCGTCGCTCAAGGCACAAATGCA
CCGAGCGCTGCTGCGGCCAATCACGCACGTGCTGCTCAGTCTTGTGCACG
CAGTATAGGCCGGCGGTCGATCGGCTCCTGTTGAGCATCACCACGAACCC
ATACCCGTCTCACTCACATGAAGTACTTGCGCCGCCTCCGCCGCGCAGCT
ACTGGGCGCTGCTGCGGCCGCACGGCGCGGCGCTGCGGCGGCGTCGGGCG
AGCCTCGACGCTGCGGAGCGCGACAGCAGAGTGCGCAGCGGCGCCGCGTA
CCGCAGCACGAGCGGCGAGGGGGCAGCGCTCAGCACATGGTCGTGCGGCT
CAGCGGAGCAGGGGCGCTTGCCGAGTGACTCGCGGTGCGGCGGCGGTAGC
TCGGAAGGTATGTATGACGGGGCGGCGGGCGGTGACGCTCCAGGTGCCAT
ATACATACCCTCGTGGTAGTGCGGGGCGGTGGTAGGTATGTATGACGGAG
CGGCCGGCGGTGACGCTCCAGGACGGGGGCGCTGCATATATACCCACATG
GTGGCGCGGTGGGGTGGCATGTAGCTTGGAGGGTATGTATAATGGGGCGG
CGGGCGGTGGCGCTGCAGGTGGGGCGACGCGTTGAAAATCGCACAGACTT
CCGAAATTTAGTGGTAGGGTGTACGTTGCTGCGCGGTTGGGCTGGGGTTC
GGCGCCGTCGCATGGAGCGCTGCTGTGTGGTACCCCCGCAAGCAGCAGAG
CTGTTGTGGCACGCTCCGAAGTCCAACCAATTGCATCGAGATTGCAATGA
GAAACTCTCGAGTTATCGCACGATGCATGTTGATTATGGTGGCGAGCTCA
ATGTCCACCATCTGGCTTTTTCGCGCTCTAGCCAAGGTTACACTGACAAG
CACAACTAGTTGCATTACAGCATACTTCAAAGTATGCTTGCTGCGATGTG
ATGAGGGCATTTGGACCGCTACGGCGTGGCGCCTTGCCTGAGCAGCGTCT
TGCGAGGCACGGTGAGGTCCGATGCCTGGGCGCGTTGCTGCCGCAGGTGG
AGGGCTTGCGGCGTGGCGACAGCCAAACGTCTCAGCACGCGCACGCAGTC
GGCTCGCAGGACGCATGGTCACGTGCATCTATGGCTGTGACTCGTAGTGG
CACTTGGGCATCTGATGAGGCCTAGTGACCGCAGCACAAGCGCCAAAATG
CGCTCAAATACGGTGCGCGTGTACACGTGTACATGGAGGAGTATAGCGTT
TGTGCCGAAGGCTGCTCTACCGGACAGACAGCCGTGCCGCATGCGCCGGA
GTTCATGTAGTGCGTGCAGTACAACTTCAACTTGTACCTATACCCCACCT
GCATGTCAGCACAGTCAATAGGGCTCGCGCTGCTGCCGCCGCCGCCGCCG
CTGCCGCTGCCAGTCCCGCCACTGCCACTCACAATGCCCGTGCACCAGGC
ACAGCCTACCCTGTGCATGTCACAGCTCGTCTCACACCTCTGCCGCCGCG
GCTGCCTCCGCTGCCGCCGCCGCCGCCGCCGCCGCTGCCCGCATTGCACC
GCAGGCACAATCAACACACCGCCGCCGCCGCTGCCCGCCGACGATGACGG
CGACGCCGACCCGACGGGCATCACGCGCGACGAGCGCGACGCGCTGTTCG
CGGCGGCCGTGCAGGCGTTCGCGCGCGCGCGCGCGGCGGCGGCGCGCGCT
GCCGCGGCGGCGGCGGCGCTGCCGATCGTCACGCTGAGCATCCGCGAGGG
CCTCGAGGCGGTGCTCGCGAGCGAGTACGCGTACCTGAGCGCTGCTGCAG
ACGGCGGAGCGCTGCTGGCGGTGCTGCACGCCGAGGTCGCGGCGCGCTTC
ATACTGCCGTACTTCTACGCGCCGGCGCCGGCGCCGCTGCCGCTGCACGT
GGCGTCACCGCCGCCGCCGCGGCGCGGCGGCGCGGCGCACGGCAGCCCGC
GCACGCTGCGGCATCGCGACGGCGGCGGCGTAGGCGTGGCAGGTGAAGTT
GATGTGTTCGTGGCGGCTGCGCAAACTGTCAATGGTGATTGTGTGTCGTG
AAGGCTGGCGGTATTGCCCTTGCGGCTGCATAGGCAGCGAGCAGTTGACG
TGTGTGTTTCGGCGCAGCATTGAAGCAACGGACAGCTGCTGCATGATGAT
GGGTGCTGATGCGCACCTTGAAAGTGGGATGCGTCCTGTTTGTGGCCTGC
GTGTGCTGAGCCGCTGATGCCGTGAGGCCCAACGCCAATGCTCGATGCAC
TGTGCAACCCACAGCAGTCAGTTTCTCGTGCGCCGCACGCAGGAGAGGCC
GCTGTTGACTGTGCCCCACCTGAAGGTCTCTGTTGCAGTTCTGTAATGAA
GTGCTGAATATCACTATGGCCTTCACTCCTCACGCCCAATTCTGGGTGTT
GTGCGTCACACAGCACGTTCCCATGGGTTAGGGTGTCCGCACCAGCACAA
AGCAGCTGGTCCACACGTGCGTGCTCTTAAAGCAGAATTGGGCATCTTTT
TTATGGACGCGTTATTTCTGTACATGACGACGGCGCCTCCCATCCGCCTG
GTCGGCCGCCACGCTGCCGCTGATGGTGCCAAGGCCATTGCCACATGGGA
GTGTTTCCATGTGGGCATGCCGCAAGCAGGTCGTCAGCCAGTCACGCTTG
CCGCTGCGATCGCCACCAAAGCTGCTAGTTGGTGCAACATGTGACACGCA
CGCACACCCATGCCATCAGCGAATGCAGGCGCCGCTGTGCGCTTGGCGTC
GTGTCTTGCCAAGCGGCACACGGTAACTGACGACGGTCAGCTCTCACCGG
TTTTCCCATTCTCACACGCGCGCTGCAGGCACCGAAACGTTGAGCGCTGC
TGCCATCCACCTCAGCGCCGACGCCAGCACGGCCGCCTCCGCGGCGCCGA
CAGCAACTTCATCTTGTGGTGCGCAACTTCAACATCAACTTCACGCGAGC
GCGCACGCGACGGCGGGGTGCTGCAGCGGCGGCAAGCGCGAGCACGACAT
CACCGGCGCCGCCAGCCTGGCGGAGGCGTACTTCTGCACCAGCGCGGCAG
TCAGCTACATGTTCCCGGAGCCGCAGAGCCCGCAGGCAAGGCTTGTGTGC
AAATCGCTTACTTGGTGGAAATGGTACAGCTTGGGCTTCTGTCATGTTGC
GAACTGTTTCTGTGAAGAGTGTGGCTTACAGGGAAGCGGTGTGTCGTGAA
ATCGGTGTACAATTTGGGCTCTCTTACTGGCGTGAGCTCGACGGCTCTTG
TCTGCGCATCGTTCACTTGGTACAGCTTGGGCGTGCTTCTTGGCGTGAAC
TGCGTCTGTACACACGATGAATCAAAGAGGACACATGCCTTTGCAATCTG
CCTGAATGGCGCTGCCACCGCTCTGCTGGGCGATGGTGAAGTTGCCTACA
TTACGTATGAGTGGACAGCTGTTCCAGTCTGCCTGCAAGCGAGAGAGTGG
CGTCGCCCGTGCAACTTGTACTACACCATCGTCTGGTCTGCTGCCATGCT
GAATCGCTTCTGTGAGCGCTGCTGCGACCGCGAACTGACGCCAGCTCGTC
GTCAGGCAAAGCTGCTTGTGCGTGGCACTGCCATTGCCGTACACGTCGTG
CGGCTGTGTCAGCGTCAACGGATCCACTGTGCGGAGCATTAGTGAGTGTT
TGTATTGCGTCTCTCGGCAGTACACGACTGTAGTACTTGACAGCAGCGGC
GTGACTCGAATCCATGAGTCCAGTACAACTATGTAGCACCATGACTCACG
GTGCAAATCCGAGAAGTGGGAGTGAATGAGCGTGGCACCCTTCATGTGGG
ATGTCACCCGAACGCGTCATGCTCTCTCCACAGTGCTGGGACGGTTGCCC
CAGCCCTCACCCTGGCCCTAACCCCTAACCCTGATGTGTGTACCCTTAAA
CCTCATCCTGATGTTTGTCCTAAACCCTATCCCTAAACCTGGCCCTAATC
CCAACCCGTCCCCTACCCCATCTATGAGAGCGGTGTGACCCTAACCCTTC
CCCATCAAACAAGAGCGTCGTGCTGAGAGCACAGGGCGTGTTGACACGTT
GTCACGTTCGCGCCAGGTGCGACTCATGATGGCCGCGAGGCAGGGCATCA
AGGCGTGCGGCTAACCCTAGCCCTCATCATATCCCAAACCCCAGCCGGAA
CCTTAACCCTTACCCCAACCCTAACACCAACCCTTACATCTATTGCGACC
CCAAGCCTTCCCCCCATCTGCGACAGTGTCGTGCTGATAGCACAGAGCGT
GTTGACGCATTGCCACTCGTGCTGATAGCACAGACTGTGCGGACATGTTG
ACACATGCGCGGCAGGTGCGACACATGATGGCCGCGAGGCAGGGCATTAA
GGCGTGCGGCGACGGGCGCAGCGCGCAGCGGCCGGCCACCACAGGTGACG
CTCCACTAATGACTTCAAGTTTGAAGTATGAGTTGAGGCGCTTCGCAGAG
CAACAGGAGCAGAGTTGTTCAAACTGAAGTACGTGGTTGGTGTGGCCCCA
TAGGCGCGCTTCATCAATGTAGCTCAAGTGCAACATTTGGTATATGTCAC
ACTGTTTGTGTATAGGGCGCCACAAGAGGCCAGCAGTATGGTTCAGGACA
AGGTATAGGTTTTCAGGGGTAATACGGTGTGAAGTTTCATGATGCCGCCT
GCATGTGCGAAGGATGGCTCCTGTATGTTTGTGGTGCTGTCTACTGAATC
ACAGCTCCAATTTCACGATATTCTCAACATTGAGAATCCAGCCATTTGTG
CAGTCAACTAATCTGCAAAGTTAGAAGCTGGTGAGTACAGTCGAGTGACG
ATCAAGCAGTGCATTCCGGGTATTTGTAAACATCACCACGCCTTCTGCTG
ATGTCACCTACGTGTAAAGCATGCCATGACATACACGGGCTTAGGTACAA
TGTGGGTGGGCTTATTTGTGCCCCAAGTGAGAATTAAAACACCAGTCGCA
CCTGCCCCCCCCCCCCCCTACGGGCACAGTAAGTCTACACACGATTATCA
AGTCACCATTCCCACTTGTTGGCATAGGTACCTGGGCTTGTTTTGCCCTG
ATGGGCAGAGCTCAGCACATGTTGAGGTTGGTCCTTAGTGAGCACTGACG
TGCCCACTTCAGACAGGGTTCGCATCGTGTTCCTAATTCACTTCGTTCTG
TAGCAAAACATGCTCTCGTGAGTTGTGTCTGCTTGGCTGCTTGGTTGTCC
ACCTCTGGCACGGTGGTGGCGCTATGCGCTGTCAGGTTATGATGCCTTGG
GTTAGCGCAGAGGGAGCTGCACTCCTCTCGCCATGAGGGAGGGCATGCTC
GGGACAAGAAGCACGAAGTCCCCAGCTACACCGCCACAGGGTGATCAATG
GGCGGAAGCGTGGACAGGGCAGGATTGCCTGTCCTACGCGATATGCGTGA
GCAGCAGGAGTTCTACAGCAGAGCGGCTTAGTTCACTGGGTACAGCATCG
CGCAACAGCAAGCGGAGACGGCATGATTTGGTCAGCATTTGAGTCACCCC
AGCGCTGGGGCAACGCAGGCAGTCGGCAACCGCGCAGGGCTTGGTTCGGT
ACCCCCTGGCGCAATGTAGGCACAGCGCAGAGGCTGGTGCTGCGGTCGAG
AGGCCTGTGCGACAGATACCAATGCCCCGGTAGGGCATGCGCGTGCTCGC
GCTGAGCTGATGGCGATTACGGACCGGGAACAGGACGGCTGCGGGTGGAG
CGGGCCATGCATGGAGACGGCTATGCAGCATAGCCGTGACAACAGCTTTC
CTCGTGCTGGAGGGAGCTCGGTCGCCAGGGAGGGCGACAGGTGTCGGCTG
CACCTTCGCATTCAGGGAGGGTCGGCAGCATTGGGCAAGGCATGCTTGCG
GAGCATGGTCTTGTGGAGGTGCCTCGCGCGCACGGATGGCGAGGGCACAT
TGGCGGGCAAGCACGCCTGCTGGATCTAGCGAGATCCGTCTCTTCCGGGG
GACGTTAAACACGGCGCTGGGACACGTATTGTCTTTCGAGCGAGGCCCGT
CTCTTCCGGGGGACGTTAAACACGGCGCTGGGACACGCATTGTCTTTCGA
GCGCATGGAGGCGACCACGACCGGCGGTGCGCATCGCCTGGTTGGGCGCA
AGCGCGATGGTCGGGCGGCCAGAGGATGGCGCGCAGCGGCTGGATAACGC
GCGAGCATTGCGGCCAGAGTATGGCGCGCAGCAGGAGCTTTGCGGCCAGA
GCATGGCGCGCAACAGCGGAGTCAAGAATGCAGCAGAGGCTTGGCGCTTC
ACGGCGCTGTAGTTCTTGAGAGTGCTTCACAGCACAGTTGTTTGCAACAG
CGTAGTGGTTTTTGCAATGAGTTTTCCACTGCACACAGCAGTTCAAACAG
TTTGAGATGCACACCGTTTGCATCGGATAGGAAGAGCACCCGGCTCATAC
CTTCTCATCGGTTTCAGTCCAGTCATTATGCAAGGTGTTGCAAATGCCTG
AGGGAGGGTGATGGAGCAGAGCTCAGCACATGTTGAGGTTGGTCCTTGGT
GAGCACTGACGTGCCCACTTCAGACAAGGTTTGCATCGTGTTCCTAATTC
ACTTCGTTCTGTAGCAACACATGCTCTCGTGAGTTGTGTCTGCTTGGCTG
CTTGGTTGTCCACCTCTGGCACGGTGGTGGCGCTATGCGCTGTCATGCCC
TAAGCAAGAATCAATAAACGTAGCATCAGCAGAAGAAATCATCATCATCC
TCATGGCAATAAAGTTTGGCGCGCTTCGCTGAAGCAGACTCCTCAACTAC
GAGCTCATGACATATTTACGTACATACTGCGCCGCGCGTTTCTTCCCCCA
GATGCACCAATTTCGAGCGCCGCGCCGCCGCCGGGGGAGCCCGTGCGCAT
CGGCGCGCACTACCGCGCTCAGCTGCACGGCAGTTACATCCAGCAGTTAC
GGACGGAGTACGCGGCGCAGTTCCGGCGGAAGCACAACCCAGAGGTACTT
TGATTTACTGCTGCTTGACGGGTGGAAAACCCTGCATCATGCAGAGTATG
TTCAGTATAGACACAGTACCAGTAGTGAAACGCGCCCGGCGCACACAGGG
TGCGCCTAGGCGCATCCCATTCCTACCCAACGACGACAGCTGCCCCTACC
CCTACTGCCTCTACTATCGCACTGCTACCATTACCACTACTACCCTCCCC
AAGGTACTTGTGAACCTCGCGTCTGTGCACGTGCCGCCTTGTGATAGTGT
ATTTCGCAGCCCGGGGGTGGGCTGTGGCTCTTGGGACCTTGTGCAAAACG
CATTTGTCAGTGGATGCAATCTCGGGCCTCAACAACACACCCTGTGCTGC
ATTGTGTGGAGCGGACAAATTGACGCCTCCAGTAGGATAGGGGGGAGGGG
GGAGTGTCAAGAAGATGTTGCGAACCTCGCACGTGCAAAGGCCATCACTG
AGGAGGGCTGTTTGGCGCTTGTGTACTTGCGAAGTGTGCAACGATGCACG
CAAGAGCGCCGCAAAGGCCCCTTAGGGTCAGTATTAGGGTAAGTGCCTGC
CCATCACCTCATCCGTTCAGTTGGCGCGCTGGCACGGCGGCAGTGCCATC
ACTGACCGCATGACGCGCTGATCTCGAGACGCCCGTTCCGTGCCGCGCTC
GCGCAGCTGGCGAGGCGCACTGCGCTGCTCTCCCCCAGAACGCCCCGCAG
CGCCGGCACGCCACGCAGTGACCCCGCTGACGTCGGGGACGCTTTCAGGG
CGGGCGCAACGAAGCCGATGTGGACACGCATGTAGCGCGGGGCTGCTACA
GTATACGCACCTTTACGCGCAGCCGCTACCGGCTTCCGTCTAAGGATTGA
ACTTTGGAACTCATGATGGCAGAGGAGTGCGTCAGAAGGTGCATTGTCAC
GGTGCGTTGCATTGGAGTTAAAGCATGGGCTCTGTATGGTAGGGGGAGCG
GCAACGATGCAAGGAATAGCCGACACACGCCGGAGGTTCTGAGGTCGCTC
CATGACAGCGCAACACTCTAGTCTGCATACACTGAAGCGGTTGGGTTACG
TGCTCGGCACAAAAAGCGTACATAAAAATCTGGCCCAGCCCTCTGCCCAG
TTGTGCGCGCATCCTTTACGCCAGCCTCAAAGAGGCTGCAGCATCAATGA
TGTACCC

Coding sequence (CDS) from alignment at Contig_11:1254986..1264042-

>mRNA_4824 ID=mRNA_4824|Name=jgi.p|Trimin1|347407|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1986bp|location=Sequence derived from alignment at Contig_11:1254986..1264042- (Tribonema minus UTEX_B_3156 )
ATGCCGCTGCGGAAGTGCACCATCACCGCGGCGTGGCGGGCGAAAGGGTG
CATGACAGATGCGCTGATCATAGAGCCGAAGGGGGCCAGACGCAAGGCTG
AGGGCGAGGTGCCAGAGACAGCGACACTTGCTGCATCGCCAGCAGCGGCG
ACGCCCGCTGCGTGCGGCGGAACCTCCGTTCTCGACGGCGGTCACAGCCC
CGTGCTGCCTCGCGTTGCGCCCCCCCTTACCACTGCGTCAGCGCCAGCAG
CAGCAGTAGCAGCACCGGTATCCACGCCGTCAGCCATGCCAATGGCAGCA
GCGTCAGTAGGCAGCAGTACCGCAGGTCAGACCGGCGCCACCAGCAGCAA
CAGCGGCAGGGCGTCGCCGCCGTCGCCGCTCGCGGCAGCCGGCGGCGCCG
CGGCAGCGGCAGCGGCGGTGGCGGAGGCGGCGCTCCTCGTGCCGCCGCGC
GCGGGCCACGAGTGCATCCTGGCGGCGCAGACCAACTTCATCCGCGTGTT
CCCGTTCCAGCAGTACGACGCGCGGCTGCAGCCTGGCTCAGCAGCGCTCG
ACGGTCTCAAGGAGCTGCTGCGCGGCGAGCACGTCGTCGGCTTCATCGGC
CTCGCCGTGCACCACCTCTACTGGGCGCTGCTGCGGCCGCACGGCGCGGC
GCTGCGGCGGCGTCGGGCGAGCCTCGACGCTGCGGAGCGCGACAGCAGAG
TGCGCAGCGGCGCCGCGTACCGCAGCACGAGCGGCGAGGGGGCAGCGCTC
AGCACATGGTCGTGCGGCTCAGCGGAGCAGGGGCGCTTGCCGAGTGACTC
GCGGTGCGGCGGCGGTAGCTCGGAAGGCACAATCAACACACCGCCGCCGC
CGCTGCCCGCCGACGATGACGGCGACGCCGACCCGACGGGCATCACGCGC
GACGAGCGCGACGCGCTGTTCGCGGCGGCCGTGCAGGCGTTCGCGCGCGC
GCGCGCGGCGGCGGCGCGCGCTGCCGCGGCGGCGGCGGCGCTGCCGATCG
TCACGCTGAGCATCCGCGAGGGCCTCGAGGCGGTGCTCGCGAGCGAGTAC
GCGTACCTGAGCGCTGCTGCAGACGGCGGAGCGCTGCTGGCGGTGCTGCA
CGCCGAGGTCGCGGCGCGCTTCATACTGCCGTACTTCTACGCGCCGGCGC
CGGCGCCGCTGCCGCTGCACGTGGCGTCACCGCCGCCGCCGCGGCGCGGC
GGCGCGGCGCACGGCAGCCCGCGCACGCTGCGGCATCGCGACGGCGGCGG
CGTAGGCGTGGCAGGCACCGAAACGTTGAGCGCTGCTGCCATCCACCTCA
GCGCCGACGCCAGCACGGCCGCCTCCGCGGCGCCGACAGCAACTTCATCT
TGTGGTGCGCAACTTCAACATCAACTTCACGCGAGCGCGCACGCGACGGC
GGGGTGCTGCAGCGGCGGCAAGCGCGAGCACGACATCACCGGCGCCGCCA
GCCTGGCGGAGGCGTACTTCTGCACCAGCGCGGCAGTCAGCTACATGTTC
CCGGAGCCGCAGAGCCCGCAGGCAAGGCTTGTGCGACACATGATGGCCGC
GAGGCAGGGCATTAAGGCGTGCGGCGACGGGCGCAGCGCGCAGCGGCCGG
CCACCACAGATGCACCAATTTCGAGCGCCGCGCCGCCGCCGGGGGAGCCC
GTGCGCATCGGCGCGCACTACCGCGCTCAGCTGCACGGCAGTTACATCCA
GCAGTTACGGACGGAGTACGCGGCGCAGTTCCGGCGGAAGCACAACCCAG
AGGGTGCGCCTAGGCGCATCCCATTCCTACCCAACGACGACAGCTGCCCC
TACCCCTACTGCCTCTACTATCGCACTGCTACCATTACCACTACTACCCT
CCCCAAGCTGGCGAGGCGCACTGCGCTGCTCTCCCCCAGAACGCCCCGCA
GCGCCGGCACGCCACGCAGTGACCCCGCTGACGTCGGGGACGCTTTCAGG
GCGGGCGCAACGAAGCCGATGTGGACACGCATGTAG