Trimin1|347363|estExt_Genemark1.C_Ctg_110052 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|347363
Unique Name	Trimin1\|347363\|estExt_Genemark1.C_Ctg_110052
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	117

Homology

[Close]

BLAST of jgi.p|Trimin1|347363 vs. uniprot
Match: A0A836CMC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMC9_9STRA)

HSP 1 Score: 229 bits (584), Expect = 4.080e-76
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0

Query:    1 MSESVRSRIDKVKKKLRKAKNDGDSTEVGKLREALSALRAQDPLFSREDQYKAAILEGRFAAAAKLKLTIDKMKQENPLRPPAEDDHDPGEDMSWGFDPSFHARPEDDTPEGWMDI 116
            MSESVRSRIDKVKKKLRKAKNDGDSTEVGKLREALSALRAQDPLFSREDQYKAAILEGRFAAAAKLKLTIDKMKQENPLRPPAEDDHDPGEDMSWGFDPSFHARPEDDTPEGWMDI
Sbjct:    1 MSESVRSRIDKVKKKLRKAKNDGDSTEVGKLREALSALRAQDPLFSREDQYKAAILEGRFAAAAKLKLTIDKMKQENPLRPPAEDDHDPGEDMSWGFDPSFHARPEDDTPEGWMDI 116

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347363 vs. uniprot

BLAST of jgi.p|Trimin1|347363 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CMC9_9STRA	4.080e-76	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..116

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_11	contig	Contig_11:434557..437824 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347363	mRNA_4740	Tribonema minus UTEX_B_3156	mRNA	Contig_11 434551..437824 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|347363|estExt_Genemark1.C_Ctg_110052 ID=Trimin1|347363|estExt_Genemark1.C_Ctg_110052|Name=jgi.p|Trimin1|347363|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=117bp
MSESVRSRIDKVKKKLRKAKNDGDSTEVGKLREALSALRAQDPLFSREDQ
YKAAILEGRFAAAAKLKLTIDKMKQENPLRPPAEDDHDPGEDMSWGFDPS
FHARPEDDTPEGWMDI*