mRNA_2283 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|158386
Unique NamemRNA_2283
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|158386 vs. uniprot
Match: A0A835YQT8_9STRA (PPIase cyclophilin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQT8_9STRA)

HSP 1 Score: 526 bits (1356), Expect = 2.020e-189
Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1
Query:    1 MLLVHWLLALCASAAEEDRWWETNYKTITTIECMTTAAPMPFAIEVRHEWAPLGADRFVAMIASGLMTDLALFRVDKDFIVQTGMCGATAPGVCAQWAELFPEFPDDRPHPRLPFKDGMVSFAGGGDDSRATDFFIAYADSEFLGGSPWETPFGVVVGGMGEVVRGFYDGYGEMQPFNPAGVNQDLINEEGNAYLRREFPKLDYIKSCAIVGAPRRPVQRGSATGAMRTHSSEHPRCFIEAGVHSISNDA 750
            MLLVHWLLALCASAAEEDRWWETNYKTITTIECMTTAAPMPFAIEVRHEWAPLGADRFVAMIASGLMTDLALFRVDKDFIVQTGMCGATAPGVCAQWAELFPEFPDDRPHPRLPFKDGMVSFAGGGDDSRATDFFIAYADSEFLGGSPWETPFGVVVGGMGEVVRGFYDGYGEMQPFNPAGVNQDLINEEGNAYLRREFPKLDYIKSCAIVGAPRRPVQRGSATGAMRTHSSEHPRCFIEAGVHSISNDA
Sbjct:    1 MLLVHWLLALCASAAEEDRWWETNYKTITTIECMTTAAPMPFAIEVRHEWAPLGADRFVAMIASGLMTDLALFRVDKDFIVQTGMCGATAPGVCAQWAELFPEFPDDRPHPRLPFKDGMVSFAGGGDDSRATDFFIAYADSEFLGGSPWETPFGVVVGGMGEVVRGFYDGYGEMQPFNPAGVNQDLINEEGNAYLRREFPKLDYIKSCAIVGAPRRPVQRGSATGAMRTHSSEHPRCFIEAGVHSISNDA 250          
BLAST of jgi.p|Trimin1|158386 vs. uniprot
Match: I2CPH7_NANGC (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CPH7_NANGC)

HSP 1 Score: 152 bits (385), Expect = 1.950e-41
Identity = 88/186 (47.31%), Postives = 115/186 (61.83%), Query Frame = 1
Query:   85 TTIECMTTAAP-MPFAIEVRHEWAPLGADRFVAMIASGLMTDLALFRVDKDFIVQTGMCGATAPGVCAQWAELFPEFPDDRPHPRLPFKDGMVSFAGGGDDSRATDFFIAYADSEFLGGSPWETPFGVVVGGMGEVVRGFYDGYGEMQPFNPAGVNQDLINEEGNAYLRREFPKLDYIKSCAIVGA 639
            T ++C TTAA    F  E++ EWAP GA+RF+ ++ASG  TD+  FRV   F+ Q G+   +A  V  +W E     PDD    R   + G +SFAG G ++R T  FIA ADS +LG SPWE P G V+ GM +V+   Y GYGE+ PFN  GV Q  I  + + YLRR+FPKLDY+K CAI+ A
Sbjct:   36 TLVKCHTTAANGAAFIFEIKSEWAPFGAERFLQLVASGYFTDVPFFRVVPGFLTQFGIPPPSA--VRKRWREEG-SIPDDPSQNRQILR-GYLSFAGAGPNTRDTQLFIALADSSWLGKSPWEVPVGRVIEGM-DVIDALYAGYGEISPFNKEGVEQYKIWADED-YLRRDFPKLDYMKDCAIIPA 215          
BLAST of jgi.p|Trimin1|158386 vs. uniprot
Match: A0A7S1T0Y9_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T0Y9_9CHLO)

HSP 1 Score: 144 bits (362), Expect = 5.720e-38
Identity = 82/198 (41.41%), Postives = 114/198 (57.58%), Query Frame = 1
Query:   91 IECMTTAAPMPFAIEVRHEWAPLGADRFVAMIASGLMTDLALFRVDKDFIVQTGMCGATAPGVCAQWAELFPEFPDDRPHPRLPFKDGMVSFAGGGDDSRATDFFIAYADSEFLGGSPWETPFGVVVGGMGEVVRGFYDGYGEMQPFNPAGVNQDLINEEGNAYLRREFPKLDYIKSCAIVGAPRRPVQRGSATGAMR 684
            + C TTA  +   IEV  EWAPLGA RF+ ++ SG   D+ALFRV  +F+VQ G+  A  P V  +W        DD P    P K G ++FAG G +SR T  +IA+ DS  LG + WETPF  V  GM +VV  FY GYG+M+ F     +   ++  GN+Y+++EFP++DYI SC ++G     V      G ++
Sbjct:   31 VACETTAGKL--TIEVHPEWAPLGAARFLELVESGFFVDVALFRVVPNFLVQFGI--AADPEVTKKWQSKG-NIMDD-PSIGTPVKRGTIAFAGSGQNSRTTQMWIAFQDSAHLGKAFWETPFAQVTEGM-DVVDRFYSGYGDMEAFGGHCPDSGKMSTLGNSYVKKEFPQMDYITSCRVLGQEAMVVAAADQAGTVQ 221          
BLAST of jgi.p|Trimin1|158386 vs. uniprot
Match: A0A7S1R7D7_ALECA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R7D7_ALECA)

HSP 1 Score: 135 bits (341), Expect = 4.660e-36
Identity = 73/183 (39.89%), Postives = 109/183 (59.56%), Query Frame = 1
Query:   91 IECMTTAAPMPFAIEVRHEWAPLGADRFVAMIASGLMTDLALFRVDKDFIVQTGMCGATAPGVCAQWAELFPEFPDDRPHPRLPFKDGMVSFAGGGDDSRATDFFIAYADSEFLGGSPWETPFGVVVGGMGEVVRGFYDGYGEMQPFNPAGVNQDLINEEGNAYLRREFPKLDYIKSCAIVGA 639
            + C TT   +   +EV  EW+P GA+ F+ ++ +G  TD+ALFR   +F+VQ G+  +T   +  ++     E   D P   LPF+ G +S+AGGG +SR    FI++  +  LG SPWETPFG V     +++   Y GYG+M P+   G +  LI + GN Y+R EFPK+D+I+SC +V A
Sbjct:   17 VSCDTTKGQLD--LEVYREWSPNGAEHFLDLVKAGWYTDIALFRAVPNFLVQFGI--STDSAMTQKYGSQTIE---DDPSLGLPFERGTLSYAGGGPNSRTNQVFISFGQNRGLGKSPWETPFGHVSKHSMDILSQIYTGYGDMPPWGK-GPSPSLIQQHGNKYVRDEFPKIDFIRSCKVVDA 191          
BLAST of jgi.p|Trimin1|158386 vs. uniprot
Match: A0A0N0GKY6_9NEIS (Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase n=1 Tax=Amantichitinum ursilacus TaxID=857265 RepID=A0A0N0GKY6_9NEIS)

HSP 1 Score: 135 bits (340), Expect = 9.720e-36
Identity = 84/208 (40.38%), Postives = 115/208 (55.29%), Query Frame = 1
Query:   16 WLLALCASAAEEDRWWETNYKTITTIECMTTAAPMPFAIEVRHEWAPLGADRFVAMIASGLMTDLALFRVDKDFIVQTGMCGATAPGVCAQWAELFPEFPDDRPHPRLP-FKDGMVSFAGGGDDSRATDFFIAYADS-EFLGGSPWETPFGVVVG-GMGEVVRGFYDGYGEMQPFNPAGVNQDLINEEGNAYLRREFPKLDYIKSCAI 630
            W++AL A+ A E             + C TT   M  AI+V  +W+PL A RF+ ++  G  T + LFR  + FI Q G   A  P    +  + +P F DD P P L  FK G +SFAG G ++R+T  FI   D  + LG +PWETPFGVV    M + V  FY GYG+M P+      Q +   +G AYL+R+FP+LDYI +CA+
Sbjct:   19 WVVALPAAQAAEP----------VRVLCQTTQGDM--AIKVNPDWSPLAARRFLQLVDDGFFTRMPLFRCVEGFICQMG---AALPH---KGLKNYPAFADDPPQPELRHFKRGYLSFAGAGPNTRSTYLFITLGDKVDSLGANPWETPFGVVEAESMQKTVSHFYTGYGDMAPWGKGPDAQKIGTLDGAAYLKRDFPQLDYINTCAV 208          
BLAST of jgi.p|Trimin1|158386 vs. uniprot
Match: A0A7S1A218_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A218_NOCSC)

HSP 1 Score: 134 bits (338), Expect = 1.990e-33
Identity = 80/193 (41.45%), Postives = 110/193 (56.99%), Query Frame = 1
Query:   85 TTIECMTTAAPMPFAIEVRHEWAPLGADRFVAMIASGLM-TDLALFRVDKDFIVQTGMCGATAPGVCAQWAEL--------FPEFPDDRPHPRLPFKDGMVSFAGGGDDSRATDFFIAYADSEFLGGSPWETPFGVVVGGMG-EVVRGFYDGYGEMQPFNPAGVNQDLINEEGNAYLRREFPKLDYIKSCAIV 633
            T ++C TT  P+   I V H WAPLGA RF+ M+  G   T +ALFR  ++FI QTG+ G   P V A+W +         + +  DDRP      K G +SFAGGG +SR T FF ++ D   LG SPWE PF  V G    E +  +Y GYGEM  F+    +Q  ++++G  Y+ R+FP+LD+I  C +V
Sbjct:  226 TVVQCETTTGPI--RIIVHHSWAPLGAARFLEMVRDGFFSTRIALFRSVRNFICQTGIAGD--PKVHAEWRKRGNIADDPQWLDMADDRP-----MKRGFLSFAGGGKNSRETQFFFSFRDVH-LGESPWEVPFAEVDGAKSYEAMDHWYTGYGEMVVFHGHAPDQGKLSQQGATYIDRDFPELDFITGCDVV 408          
BLAST of jgi.p|Trimin1|158386 vs. uniprot
Match: A0A7R9Y723_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y723_9VIRI)

HSP 1 Score: 130 bits (326), Expect = 1.460e-32
Identity = 91/236 (38.56%), Postives = 123/236 (52.12%), Query Frame = 1
Query:    1 MLLVHW-LLALCASAAEEDRWWETNYKTITTIECMTTAAPMPFAIEVRHEWAPLGADRFVAMIAS-GLMTDLALFRVDKDFIVQTGMCGATAPGVCAQWAELFPEFPDDRPHPRLPFKDGMVSFAGGGDDSRATDFFIAYADSEFLGGSPWETPFGVVV-GGMGEVVRGFYDGYGEMQPFNPAGVNQDLINEEGNAYLRREFPKLDYIKSCAIVGAPRRPVQRGSATGAMRTHSSE 699
            +L V W LLAL   AA +D   +      T + C TTA  +   I V+ + APLGA RF+ M+               K+FI QTG+ G  A     +WA       DD P   L  K G +SFAGGG ++R+T FFI + DS+ LG +PWE  FG +    M       Y GYGEM+PFN  G++Q  I +EG+ Y+RREFP  D+ + C +  A RR   R +A    R  ++E
Sbjct:    4 LLAVGWSLLALVVLAAGDDGAADWCRHGETPVACDTTAGAL--RICVQPDRAPLGAARFLDMVRDPDFFXXXXXXXTVKNFISQTGIPGDAA--TRERWARAG-NIQDDPPGGHL--KRGELSFAGGGKNTRSTQFFITFNDSKHLGDAPWEVAFGYIEPSSMESTADHLYAGYGEMEPFNKEGISQSRIQKEGSDYVRREFPNTDFWRGCHV--AVRRNPSRAAAEAHARAQAAE 230          
BLAST of jgi.p|Trimin1|158386 vs. uniprot
Match: A0A1F9UAG7_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Elusimicrobia bacterium RIFCSPHIGHO2_02_FULL_57_9 TaxID=1797943 RepID=A0A1F9UAG7_9BACT)

HSP 1 Score: 125 bits (313), Expect = 5.960e-32
Identity = 75/170 (44.12%), Postives = 100/170 (58.82%), Query Frame = 1
Query:  124 FAIEVRHEWAPLGADRFVAMIASGLMTDLALFRVDKDFIVQTGMCGATAPGVCAQWAELFPEFPDDRPHPRLPFKDGMVSFAGGGDDSRATDFFIAYADSEFLGGSPWETPFGVVVGGMGEVVRGFYDGYGEMQPFNPAGVNQDLINEEGNAYLRREFPKLDYIKSCAIV 633
            F +E   +WAP GADRF  ++  G   D+A FR    F+VQ G+ G+  P + A+W E+     DD+   +   K GMVSFA  G D+R T  FI YAD+  L G  + TPF  VV GM +VV   Y GYGE  P    G +Q  I  EGNAYL++++P+LDYIKS  ++
Sbjct:   29 FTLEGHRDWAPNGADRFYNLVKMGFFEDIAFFRAIDGFMVQFGIHGS--PDIAAKWREV--NIKDDKAAGQSN-KPGMVSFATAGPDTRTTQLFINYADNGQLDGMGF-TPFAKVVEGM-DVVNSLYKGYGEGAP-RGRGPDQGRIQMEGNAYLKKDYPELDYIKSAKLL 190          
BLAST of jgi.p|Trimin1|158386 vs. uniprot
Match: A0A1F9QSI4_9BACT (Peptidyl-prolyl cis-trans isomerase n=2 Tax=unclassified Elusimicrobia TaxID=1797919 RepID=A0A1F9QSI4_9BACT)

HSP 1 Score: 124 bits (312), Expect = 8.400e-32
Identity = 73/170 (42.94%), Postives = 102/170 (60.00%), Query Frame = 1
Query:  124 FAIEVRHEWAPLGADRFVAMIASGLMTDLALFRVDKDFIVQTGMCGATAPGVCAQWAELFPEFPDDRPHPRLPFKDGMVSFAGGGDDSRATDFFIAYADSEFLGGSPWETPFGVVVGGMGEVVRGFYDGYGEMQPFNPAGVNQDLINEEGNAYLRREFPKLDYIKSCAIV 633
            F +E+   W+PLGADRF  ++ +G  TDLA FRV + F+VQ G+ G   P V + W        DD P  +   K G VS+A  G D+R T  FI + D+E L G  + +PFG V+ GM E+V   Y GYGE  P +  G +Q  +  +GNAYL+++FPK+DYIKS  ++
Sbjct:   29 FTLEINRSWSPLGADRFYNLVKAGFFTDLAFFRVIEGFMVQFGIHGD--PAVASAWRGA--RIKDD-PVKQSNTK-GYVSYAMAGPDTRTTQMFINFGDNERLDGMGF-SPFGKVIDGM-EIVENIYSGYGEGAP-SGMGPDQGRVQMQGNAYLKKDFPKMDYIKSAQLL 189          
BLAST of jgi.p|Trimin1|158386 vs. uniprot
Match: A0A355E0A6_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Elusimicrobia bacterium TaxID=2030800 RepID=A0A355E0A6_9BACT)

HSP 1 Score: 125 bits (315), Expect = 1.510e-31
Identity = 76/169 (44.97%), Postives = 97/169 (57.40%), Query Frame = 1
Query:  124 FAIEVRHEWAPLGADRFVAMIASGLMTDLALFRVDKDFIVQTGMCGATAPGVCAQWAELFPEFPDDRPHPRLPFKDGMVSFAGGGDDSRATDFFIAYADSEFLGGSPWETPFGVVVGGMGEVVRGFYDGYGEMQPFNPAGVNQDLINEEGNAYLRREFPKLDYIKSCAI 630
            + +EVR +W+P GADRF  ++  G  TDLA FRV K F+ QTG+ G   P + A W        DD P  +   + G VS+A  G  +R T FF+ Y D+  L    + TPFG VV GM + V   Y  YGE  P    G +Q  +  EGNAYL++EFPKLDYIKS AI
Sbjct:   90 YVVEVRRKWSPNGADRFYNLVRLGYFTDLAYFRVLKGFMAQTGIHGT--PDISALWRGA--RIQDDPPAGQSNTR-GFVSYATAGPHTRTTQFFVNYGDNANLDSMGF-TPFGQVVDGM-KTVEALYGDYGEGAP-RGTGPDQGRVQMEGNAYLKKEFPKLDYIKSAAI 250          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158386 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQT8_9STRA2.020e-189100.00PPIase cyclophilin-type domain-containing protein ... [more]
I2CPH7_NANGC1.950e-4147.31Peptidyl-prolyl cis-trans isomerase n=2 Tax=Nannoc... [more]
A0A7S1T0Y9_9CHLO5.720e-3841.41Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A7S1R7D7_ALECA4.660e-3639.89Peptidyl-prolyl cis-trans isomerase n=1 Tax=Alexan... [more]
A0A0N0GKY6_9NEIS9.720e-3640.38Putative bifunctional phosphatase/peptidyl-prolyl ... [more]
A0A7S1A218_NOCSC1.990e-3341.45Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]
A0A7R9Y723_9VIRI1.460e-3238.56Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A1F9UAG7_9BACT5.960e-3244.12Peptidyl-prolyl cis-trans isomerase n=1 Tax=Elusim... [more]
A0A1F9QSI4_9BACT8.400e-3242.94Peptidyl-prolyl cis-trans isomerase n=2 Tax=unclas... [more]
A0A355E0A6_9BACT1.510e-3144.97Peptidyl-prolyl cis-trans isomerase n=1 Tax=Elusim... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_5contigContig_5:361824..364920 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|158386|e_gw1.5.261.1
Descriptionpeptidyl-prolyl cis-trans isomerase activity
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0652@1|root,KOG0883@2759|Eukaryota
Evalue1.09e-53
Seed ortholog2880.D7FJR7
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionCyclophilin-type peptidyl-prolyl cis-trans isomerase domain
Ec32 orthologEc-06_010460.1
TranscriptId158708
TrackFilteredModels1
ProteinId158386
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158386gene_2283Tribonema minus UTEX_B_3156 geneContig_5 361824..364920 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158386Trimin1|158386|e_gw1.5.261.1Tribonema minus UTEX_B_3156 polypeptideContig_5 361824..364920 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_2283_3exon_2283_3Tribonema minus UTEX_B_3156 exonContig_5 361824..361989 -
exon_2283_2exon_2283_2Tribonema minus UTEX_B_3156 exonContig_5 362816..363267 -
exon_2283_1exon_2283_1Tribonema minus UTEX_B_3156 exonContig_5 364786..364920 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_2283CDS_2283Tribonema minus UTEX_B_3156 CDSContig_5 364786..364920 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_2283 ID=mRNA_2283|Name=jgi.p|Trimin1|158386|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=753bp|location=Sequence derived from alignment at Contig_5:361824..364920- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGCTGGTGCATTGGCTGCTGGCGCTCTGCGCCAGCGCGGCCGAGGA
GGATCGATGGTGGGAAACCAACTACAAGACCATCACCACGATAGAGTGCA
TGACAACAGCGGCTCCGATGCCCTTCGCGATAGAGGTGCGGCACGAGTGG
GCCCCGCTCGGCGCCGACCGCTTCGTCGCCATGATCGCGAGCGGCCTCAT
GACGGACCTCGCGCTCTTCCGCGTCGACAAGGACTTCATCGTGCAGACGG
GCATGTGCGGCGCGACGGCGCCCGGCGTGTGCGCGCAGTGGGCAGAGCTG
TTCCCTGAGTTCCCCGACGACCGCCCGCATCCGCGCCTCCCGTTCAAGGA
CGGCATGGTCAGTTTCGCGGGGGGGGGCGATGACTCGCGCGCCACCGACT
TCTTCATCGCGTACGCGGATTCGGAGTTCCTGGGGGGGTCGCCGTGGGAG
ACGCCATTTGGGGTGGTGGTGGGGGGTATGGGCGAGGTGGTGAGGGGTTT
TTACGATGGGTATGGGGAGATGCAGCCGTTCAACCCCGCCGGCGTGAACC
AGGACCTCATCAACGAGGAGGGGAACGCGTATCTCAGGCGCGAGTTCCCA
AAGCTCGATTACATCAAGTCGTGCGCAATTGTGGGAGCGCCGCGGCGGCC
TGTGCAAAGAGGGTCCGCCACAGGTGCGATGAGAACACATTCATCCGAGC
ATCCCCGCTGTTTCATAGAAGCAGGAGTACACTCTATAAGTAATGACGCA
TAG
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protein sequence of jgi.p|Trimin1|158386

>Trimin1|158386|e_gw1.5.261.1 ID=Trimin1|158386|e_gw1.5.261.1|Name=jgi.p|Trimin1|158386|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=251bp
MLLVHWLLALCASAAEEDRWWETNYKTITTIECMTTAAPMPFAIEVRHEW
APLGADRFVAMIASGLMTDLALFRVDKDFIVQTGMCGATAPGVCAQWAEL
FPEFPDDRPHPRLPFKDGMVSFAGGGDDSRATDFFIAYADSEFLGGSPWE
TPFGVVVGGMGEVVRGFYDGYGEMQPFNPAGVNQDLINEEGNAYLRREFP
KLDYIKSCAIVGAPRRPVQRGSATGAMRTHSSEHPRCFIEAGVHSISNDA
*
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mRNA from alignment at Contig_5:361824..364920-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_2283 ID=mRNA_2283|Name=jgi.p|Trimin1|158386|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3097bp|location=Sequence derived from alignment at Contig_5:361824..364920- (Tribonema minus UTEX_B_3156 )
ATGCTGCTGGTGCATTGGCTGCTGGCGCTCTGCGCCAGCGCGGCCGAGGA GGATCGATGGTGGGAAACCAACTACAAGACCATCACCACGATAGAGTGCA TGACAACAGCGGCTCCGATGCCCTTCGCGATAGAGGTAAGCAAGGGTGCC TATGTTTAAGTAAGGGCGTTGACAAACATCATGTGATGAAGCCATCAGCC TAAGCATACGCTGGTGAGAGCAGAGGCGCCTTGATGTCATTTGTCCAGTC CTGTCACTGGCGCACGAGGTTTAGTCGCACAATGAATTGTGCCCTGCCTG ACAAACTGTGTGTCGAAGACGTCAGCTCGATTGCTGTGCAGACACACAGC ACCGCGTGTTGATCAGAGCTCATTGTGTTGCGTCTGTGTCGACACTGCAG CGCACCACGGTGCCACCACCTGCAACGTGTCTGTTTTTTAGAAGACATTC AGGCAGATTATGAGTATGCAGCTTGATGCGAAAGCACCGTCCTAAATAGG CAATGGAGCCTGACAGCATTGCTGTGCAATGCTGCTGGTGCTGGTGCTGG TGCTGGTGCTGCTGCTGATAGCAACGGTGACTCACGGTGCCGCTACATAC TACTGCTGCTGAGCATGAGACGTGCAGGCGGGCCTCCTGTTGGCATGATT GCATTGGCGTCAACGCTCAGAAGTGGCTCTTGCGCTCATCTCAACCAGCC TCCAAGTAGCTGTTGCACTTCAAGTCCAAACTGCGCAGTCCCATTGTGCG CCTGCCGCTGCCGAGCCCGCAAGCTGCGAAGTGGCGCTGACCGCATTGTC ACCGTGACGGATGCCTTAAAGCATCGAACCTGTCTGTCAACGCAATTGAT CATTATCCATGCTGTGCACATACACACATACTATACTTATGCGGTGCGCG AGACCCTGCGCGGCGCCACCCACCCTGTCATCGTACCCAAATGCAGCCAC GTGACGTTCGCGCAATCGGAGTGGCTTTCACGCACGCACTGTAACTCTCA ATGACGCACTCGCAGCACTCCACATGCGCAGTGCCCGCGGCGCTCGCCGC GTCGTCGACATCATTGGTTGTGCACCCCCGTGGGGATGCTCGGCTCGATT GGCGTTCAAGGCACGCACTGCGGTGCATGGCAGGCAACCGCATTCTCCAG AGCGGCTTTATTACCAGGTGTTGCCTATTGCACGTGAGCTTCAAGACAAA TGTCGACGCGCGGCAGATGATTTGCTTCCCTTATATCGCTGCTGCCAATG CCATGAGTCTGCAGGTGCCAAACGAGTGCGCCCGTCTCCGCACCGACTGC CTCCATTACCCAGAGCATCTGACGACTGACGCCAGTGGCAGTGACCTTCA ATGTACAAACCTCAATGCGTAGCACATCACGTGATCTGCAGCTCCTCGAC ACCGCTGCCGTCGATGCCTCACAACGATCGTCCATCGCAGACCTTTTACG TGTGGCAACTACTTTGCTTCCCGCTGTCACCAATGTTATGAGCCTGCAGG TGCGGCACGAGTGGGCGCCGACCACTTCGTCGCCATGATCGCGAGCGGCC TCACAACAATCGTCCATCGCAGACCCTCACAAGTGCAACTCTGAACGCGC AGCACCTGATTTTTCTTCCCGACGTCGCTGCCGCCAATTCTGTGACTGTG CAGGTGCGGCACGAGTGGGCCCCGCTCGGCGCCGACCGCTTCGTCGCCAT GATCGCGAGCGGCCTCATGACGGACCTCGCGCTCTTCCGCGTCGACAAGG ACTTCATCGTGCAGACGGGCATGTGCGGCGCGACGGCGCCCGGCGTGTGC GCGCAGTGGGCAGAGCTGTTCCCTGAGTTCCCCGACGACCGCCCGCATCC GCGCCTCCCGTTCAAGGACGGCATGGTCAGTTTCGCGGGGGGGGGCGATG ACTCGCGCGCCACCGACTTCTTCATCGCGTACGCGGATTCGGAGTTCCTG GGGGGGTCGCCGTGGGAGACGCCATTTGGGGTGGTGGTGGGGGGTATGGG CGAGGTGGTGAGGGGTTTTTACGATGGGTATGGGGAGATGCAGCCGTTCA ACCCCGCCGGCGTGAACCAGGACCTCATCAACGAGGAGGGGAACGCGTAT CTCAGGTGCGTCATTGTGGATTTTCCGCGCCCCCGCTAGCTTGAAAATCA TGTATGCTTGTTTTGCGGCATGGATTAGTCCAAGGAACTCTAAAGTAGAA GTACGCAACTTGAAGTGCTTATGAGGGGAGCGTTTCGTGACCCCGCAGGC ACTGTTGCACAGTCGCGTAAAGTGCGCTGTGCTGCGGCATGCAGTGGGCC AGAGCGTACAGTACCGCCGAGTCGCGTGTGACCCTTCAAGCAAATATCAG TGATGATTGCCTGCGTCGGAACCACCTGTGGCGACTCTGGCTTTACTCAC TGAGTCAAATAGCTCGTGCACATTTAGCAGGGCAGTCGCCCCCTTTGACG TGCCGGGACCCTTAGGGTTAGCCCTAACACTAGCCCTGCACCTCCGCAGC ATGCGTGTGATTGGCTCAGTCGCACCACCACCCGCTTTTGTGGGACAGAC CGCCATACTCATGGCAACGTTAACCCCCTCAGCAACAGTGGCGACCGCAG TGCTTTCATCGCCGCCTAAGTGGTTTCCTCTCTGCCGCAAGCGAGGGCGA CATTAGGCCAATTATTACGGCCTTGAACTAGGGTTAGGATCACGGTTAGG TCAGGGTTAATAGGCAGGTGCTCATGCGCGCTTCACATACGCGTTGTTTC TGTCTCTGCCCGTCAGGCGCGGGCTTCTCAAGCTATTCAACTCTCTCAGC AGGTGTAGGTCCGTATACTCAAAGACCATTAAGCCCTGCTGCCATGGCAA CAACACGTGCTTTCATCTCCGTCGTTCCTATTTCGGCATGCTGCTCACAC AAAATCTGCGTTTCATTTCCCTGAACGTCAGGCGCGAGTTCCCAAAGCTC GATTACATCAAGTCGTGCGCAATTGTGGGAGCGCCGCGGCGGCCTGTGCA AAGAGGGTCCGCCACAGGTGCGATGAGAACACATTCATCCGAGCATCCCC GCTGTTTCATAGAAGCAGGAGTACACTCTATAAGTAATGACGCATAG
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Coding sequence (CDS) from alignment at Contig_5:361824..364920-

>mRNA_2283 ID=mRNA_2283|Name=jgi.p|Trimin1|158386|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=753bp|location=Sequence derived from alignment at Contig_5:361824..364920- (Tribonema minus UTEX_B_3156 )
ATGCTGCTGGTGCATTGGCTGCTGGCGCTCTGCGCCAGCGCGGCCGAGGA
GGATCGATGGTGGGAAACCAACTACAAGACCATCACCACGATAGAGTGCA
TGACAACAGCGGCTCCGATGCCCTTCGCGATAGAGGTGCGGCACGAGTGG
GCCCCGCTCGGCGCCGACCGCTTCGTCGCCATGATCGCGAGCGGCCTCAT
GACGGACCTCGCGCTCTTCCGCGTCGACAAGGACTTCATCGTGCAGACGG
GCATGTGCGGCGCGACGGCGCCCGGCGTGTGCGCGCAGTGGGCAGAGCTG
TTCCCTGAGTTCCCCGACGACCGCCCGCATCCGCGCCTCCCGTTCAAGGA
CGGCATGGTCAGTTTCGCGGGGGGGGGCGATGACTCGCGCGCCACCGACT
TCTTCATCGCGTACGCGGATTCGGAGTTCCTGGGGGGGTCGCCGTGGGAG
ACGCCATTTGGGGTGGTGGTGGGGGGTATGGGCGAGGTGGTGAGGGGTTT
TTACGATGGGTATGGGGAGATGCAGCCGTTCAACCCCGCCGGCGTGAACC
AGGACCTCATCAACGAGGAGGGGAACGCGTATCTCAGGCGCGAGTTCCCA
AAGCTCGATTACATCAAGTCGTGCGCAATTGTGGGAGCGCCGCGGCGGCC
TGTGCAAAGAGGGTCCGCCACAGGTGCGATGAGAACACATTCATCCGAGC
ATCCCCGCTGTTTCATAGAAGCAGGAGTACACTCTATAAGTAATGACGCA
TAG
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