Trimin1|158339|e_gw1.5.222.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|158339
Unique Name	Trimin1\|158339\|e_gw1.5.222.1
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	346

Homology

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BLAST of jgi.p|Trimin1|158339 vs. uniprot
Match: A0A836CB44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB44_9STRA)

HSP 1 Score: 281 bits (718), Expect = 1.900e-89
Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0

Query:    1 MPAKLCSIDDCTKQAVKGGDATEFCVKHGGGDRCQYIDAEGNSCGSASKTDKKTETGAVGMXXXXXXXXXXXXXXXXXXXXXASAVTSKTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIDHCCAGDSFAYGSHPEDGRGMCTHAMRCLVRDQTDEDERKALMRHFGFKQDLVMRGEHAFYHRVAQLVPDVIRCDGTGIRPSPGQGVHDAAC 345
            MPAKLCSIDDCTKQAVKGGDATEFCVKHGGGDRCQYIDAEGNSCGSASKTDKKTETGAVGMXXXXXXXXXXXXXXXXXXXXXASAVTSKTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIDHCCAGDSFAYGSHPEDGRGMCTHAMRCLVRDQTDEDERKALMRHFGFKQDLVMRGEHAFYHRVAQLVPDVIRCDGTGIRPSPGQGVHDAAC
Sbjct:    1 MPAKLCSIDDCTKQAVKGGDATEFCVKHGGGDRCQYIDAEGNSCGSASKTDKKTETGAVGMXXXXXXXXXXXXXXXXXXXXXASAVTSKTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIDHCCAGDSFAYGSHPEDGRGMCTHAMRCLVRDQTDEDERKALMRHFGFKQDLVMRGEHAFYHRVAQLVPDVIRCDGTGIRPSPGQGVHDAAC 345

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BLAST of jgi.p|Trimin1|158339 vs. uniprot
Match: A0A836CIX9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX9_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.970e-8
Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 0

Query:    6 CSIDDCTKQAVKGGDATEFCVKHGGGDRCQYIDAEGNSC 44
            C ++ CTKQAV    +TEFCV HGGGDRCQ++D  GNSC
Sbjct:    1 CEVNGCTKQAVLRSGSTEFCVMHGGGDRCQHVDEGGNSC 39

[Close]

BLAST of jgi.p|Trimin1|158339 vs. uniprot
Match: A0A836CC28_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC28_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.180e-7
Identity = 25/44 (56.82%), Postives = 33/44 (75.00%), Query Frame = 0

Query:    6 CSIDDCTKQAVKGGDATEFCVKHGGGDRCQYIDAEGNSCGSASK 49
            C ++ CTKQAV+   +TEFCV H GGDRCQ++D  GNSC + +K
Sbjct:    1 CEVNGCTKQAVRRSGSTEFCVMHEGGDRCQHVDEGGNSCNACAK 44

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|158339 vs. uniprot

BLAST of jgi.p|Trimin1|158339 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A836CB44_9STRA	1.900e-89	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CIX9_9STRA	3.970e-8	64.10	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A836CC28_9STRA	1.180e-7	56.82	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31827	EMB\|CAB89363.1	coord: 125..257 coord: 4..146

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_5	contig	Contig_5:1431990..1433027 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|158339	mRNA_2424	Tribonema minus UTEX_B_3156	mRNA	Contig_5 1431990..1433027 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|158339|e_gw1.5.222.1 ID=Trimin1|158339|e_gw1.5.222.1|Name=jgi.p|Trimin1|158339|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=346bp
MPAKLCSIDDCTKQAVKGGDATEFCVKHGGGDRCQYIDAEGNSCGSASKT
DKKTETGAVGMCIKHGGGDRCQHDDEGHKPCGASAVTSKTGTGVVGMCVK
HGGDDRCQYVDEEINACGSSVTRSKTGVGAVGMCFKHGNGDRCQHVDEVG
NICVSSMESSKTGTGTAGMCIKHGGGDRCQYIDDGGNSCKASSATSKAGT
GVVGMCKRHGGGDRCRHVDEEGNSCGSSAQTSKTGTGAANMCTTHGGGDR
CQIDHCCAGDSFAYGSHPEDGRGMCTHAMRCLVRDQTDEDERKALMRHFG
FKQDLVMRGEHAFYHRVAQLVPDVIRCDGTGIRPSPGQGVHDAAC*